Contactin 1 (CNTN1)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:151213 UniGene Hs.143434 Homo sapiens (human) CNTN1

Order cDNA clone, Links

Contactin 1 (CNTN1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_509005.2	PREDICTED: contactin 1 isoform 12	P. troglodytes	100.0	1017
NP_001834.2	contactin 1 isoform 1 precursor	H. sapiens	100.0	1017
XP_001088804.1	PREDICTED: similar to contactin 1 isoform 2 precursor	M. mulatta	99.8	1006
NP_031753.1	contactin 1	M. musculus	96.7	1019
NP_001079338.1	contactin/F3/F11	X. laevis	72.5	1004
NP_851300.2	contactin 1a	D. rerio	61.3	992

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; uncharacterized tissue; pancreas; embryonic tissue; eye; ear; mixed; connective tissue; prostate; uterus; intestine; testis; placenta; kidney; spinal cord; mammary gland; skin; nerve; pituitary gland; muscle; ganglia; adipose tissue; lung

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	12
Map position:	12q11-q12
UniSTS entry:	Chr 12	RH93881
UniSTS entry:	Chr 12	RH80961
UniSTS entry:	Chr 12	WI-19166
UniSTS entry:	Chr 12	GDB:384884
UniSTS entry:	Chr 12	WI-15428
UniSTS entry:	Chr 12	WI-7876
UniSTS entry:	Chr 12	RH15725
UniSTS entry:	Chr 12	STS-H29473
UniSTS entry:	Chr 12	D12S1526E

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_175038.1	Homo sapiens contactin 1 (CNTN1), transcript variant 2, mRNA	P
BX648591.1	Homo sapiens mRNA; cDNA DKFZp686G14198 (from clone DKFZp686G14198)	A
NM_001843.2	Homo sapiens contactin 1 (CNTN1), transcript variant 1, mRNA	P
CR601551.1	full-length cDNA clone CS0DC027YI07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human)	P
DQ442054.1	Homo sapiens contactin 1 mRNA, exon A-151 and 5' UTR
DQ442053.1	Homo sapiens contactin 1 mRNA, exon C-208 and 5' UTR
AK289698.1	Homo sapiens cDNA FLJ78592 complete cds, highly similar to Homo sapiens contactin 1, mRNA	P
AK289544.1	Homo sapiens cDNA FLJ75570 complete cds, highly similar to Homo sapiens contactin 1, mRNA	P
Z21488.1	H.sapiens contactin mRNA,	P
BC036569.2	Homo sapiens contactin 1, mRNA (cDNA clone MGC:41894 IMAGE:5273941), complete cds	PA
U07819.1	Human contactin 1 precursor (CNTN1) mRNA, complete cds	P
U07820.1	Human contactin 2 precursor (CNTN1) mRNA, complete cds	P

EST sequences (10 of 210) [Show all sequences]

R15795.1	Clone IMAGE:53197	brain	3' read	A
T05541.1	Clone HFBDC11	brain		P
AI056535.1	Clone IMAGE:1673862	mixed	3' read
AI091445.1	Clone IMAGE:1651460	mixed	3' read
AI124672.1	Clone IMAGE:1539939	brain	3' read	P
BX097000.1	Clone IMAGp998K24281_;_IMAGE:49757	brain		A
R25234.1	Clone IMAGE:132304	placenta	5' read
R27316.1	Clone IMAGE:132304	placenta	3' read	A
AI242169.1	Clone IMAGE:1851113	mixed	3' read
R38995.1	Clone IMAGE:24884	brain	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria