R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 5 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|266567|sp|P29677|MPPA_SOLTU MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA
SUBUNIT PRECURSOR (ALPHA-MPP) (UBIQUINOL-CYTOCHROME C REDUCTASE
SUBUNIT II) >gi|421956|pir||S23558 mitochondrial processing
peptidase (EC 3.4.99.41) alpha chain precursor - potato
>gi|21493|emb|CAA46990.1| (X66284) mitochondrial processing
peptidase [Solanum tuberosum]
Length = 504
Frame 1 hits (HSPs): _____________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 504
0 150 300 450
__________________
Annotated Domains:
DOMO DM00817: INSULINASEFAMILY,ZINC-BINDINGRE 58..492
PFAM Peptidase_M16: Insulinase (Peptidase fam 84..231
PRODOM PD037446: MPPA(1) Q41440(1) Q9ZU25(1) 1..74
PRODOM PD000718: UCR2(7) MPPA(5) MPPB(4) 76..267
PRODOM PD001445: MPPA(5) MPPB(4) UCR1(4) 271..486
PROSITE INSULINASE: Insulinase family, zinc-bind 105..128
__________________
Plus Strand HSPs:
Score = 454 (159.8 bits), Expect = 4.7e-42, P = 4.7e-42
Identities = 91/124 (73%), Positives = 104/124 (83%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
GIQ TT SDF +A+D+A E++ VA P +VDQ QLNRAKQATKSAILMNLESRMV SED
Sbjct: 380 GIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQATKSAILMNLESRMVASED 439
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYESVSL 363
IGRQ LTYGER PVE FLKA+D V++KDI S+ QKLISSPLTMASYGDVL +PSY++VS
Sbjct: 440 IGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSLPSYDAVSS 499
Query: 364 XFRS 375
FRS
Sbjct: 500 RFRS 503
>gi|2117355|pir||S51590 mitochondrial processing peptidase (EC 3.4.99.41)
alpha-II chain precursor - potato >gi|587562|emb|CAA56520.1|
(X80236) mitochondrial processing peptidase [Solanum tuberosum]
Length = 504
Frame 1 hits (HSPs): _____________
Annotated Domains: ___ ___
__________________________________________________
Database sequence: | | | | | 504
0 150 300 450
__________________
Annotated Domains:
Entrez domain: transit peptide (mitochondrion) 1..24
PROSITE INSULINASE: Insulinase family, zinc-bind 105..128
__________________
Plus Strand HSPs:
Score = 419 (147.5 bits), Expect = 2.4e-38, P = 2.4e-38
Identities = 83/124 (66%), Positives = 99/124 (79%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
GIQ T SDF +AI++A E+ VA PG+VD QL+RAKQ+TKSAILMNLESRMV SED
Sbjct: 380 GIQAATTSDFAPRAIEVAVKELTAVANPGEVDMVQLDRAKQSTKSAILMNLESRMVASED 439
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYESVSL 363
IGRQ L YGERKPVE LKA+D +++ DI S++QKLISSPLTMASYGDVL +P+Y+ VS
Sbjct: 440 IGRQLLIYGERKPVEHVLKAIDAISANDIASVAQKLISSPLTMASYGDVLSLPTYDVVSS 499
Query: 364 XFRS 375
F S
Sbjct: 500 RFHS 503
>gi|4220446|gb|AAD12673.1| (AC006216) Strong similarity to gi|2062155 T02O04.2
mitochondrial processing peptidase alpha subunit precusor isolog
from Arabidopsis thaliana BAC gb|AC001645. ESTs gb|Z18504 and
gb|AA395715 come from this gene
Length = 503
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 503
0 150 300 450
Plus Strand HSPs:
Score = 372 (131.0 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 75/123 (60%), Positives = 96/123 (78%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
GI + F +KAI++AA E+ VA G+V+QA L+RAK ATKSA+LMNLESRM+ +ED
Sbjct: 382 GIYGCSSPQFAAKAIELAAKELKDVAG-GKVNQAHLDRAKAATKSAVLMNLESRMIAAED 440
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYESVSL 363
IGRQ LTYGERKPV+ FLK+VD++T KDI + K+IS PLTM S+GDVL VPSY+++S
Sbjct: 441 IGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAVPSYDTISS 500
Query: 364 XFR 372
FR
Sbjct: 501 KFR 503
>gi|2062155|gb|AAB63629.1| (AC001645) mitochondrial processing peptidase alpha
subunit precusor isolog [Arabidopsis thaliana]
Length = 499
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 499
0 150 300 450
Plus Strand HSPs:
Score = 367 (129.2 bits), Expect = 7.8e-33, P = 7.8e-33
Identities = 75/123 (60%), Positives = 95/123 (77%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
GI T +F S+ I++ A+E+ VA G+V+Q L+RAK ATKSAILMNLESRM+ +ED
Sbjct: 378 GIYGCTSPEFASQGIELVASEMNAVAD-GKVNQKHLDRAKAATKSAILMNLESRMIAAED 436
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYESVSL 363
IGRQ LTYGERKPV+ FLK VD++T KDI + K+I+ PLTMA++GDVL VPSY+SVS
Sbjct: 437 IGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMATFGDVLNVPSYDSVSK 496
Query: 364 XFR 372
FR
Sbjct: 497 RFR 499
>gi|7304131|gb|AAF59168.1| (AE003839) CG8728 gene product [Drosophila
melanogaster]
Length = 556
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 556
0 150 300 450
Plus Strand HSPs:
Score = 205 (72.2 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 42/105 (40%), Positives = 71/105 (67%), Frame = +1
Query: 46 IDIAANEILGVAT-PGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKP 222
+++ E++G+A PG+ +L R+K +S +LMNLESR VV ED+GRQ L G+RK
Sbjct: 435 VEVLTREMMGMAAEPGR---EELMRSKIQLQSMLLMNLESRPVVFEDVGRQVLVTGQRKR 491
Query: 223 VEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYESVS 360
+ F+K ++ VT+ DI ++Q+L+SSP ++A+ GD+ +P ++
Sbjct: 492 PQHFIKEIESVTAADIQRVAQRLLSSPPSVAARGDIHNLPEMSHIT 537
>gi|6003679|gb|AAF00541.1|AF187883_1 (AF187883) mitochondrial processing
peptidase alpha subunit homolog [Toxoplasma gondii]
Length = 438
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 438
0 150 300
Plus Strand HSPs:
Score = 186 (65.5 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 39/96 (40%), Positives = 53/96 (55%), Frame = +1
Query: 88 GQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKD 267
G V + +L RAK + KS+I MNLE R +V ED+GRQ L ++F +D VT D
Sbjct: 338 GSVTKEELQRAKNSLKSSIFMNLECRRIVVEDVGRQLLMSNRVISPQEFCTGIDAVTEAD 397
Query: 268 ITSISQKLISSPLTMASYGDVLYVPSYESVSLXFRS 375
I + + P T+ +YGDV VP YE V R+
Sbjct: 398 IKRVVDAMFKKPPTVVAYGDVSTVPHYEEVRAALRA 433
>gi|1709089|sp|Q10713|MPPA_HUMAN MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA
SUBUNIT PRECURSOR (ALPHA-MPP) (P-55) (HA1523) (KIAA0123)
Length = 525
Frame 1 hits (HSPs): ___________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 525
0 150 300 450
__________________
Annotated Domains:
DOMO DM00817: INSULINASEFAMILY,ZINC-BINDINGRE 50..501
PFAM Peptidase_M16: Insulinase (Peptidase fam 76..227
PRODOM PD037444: MPPA(2) 1..66
PRODOM PD000718: UCR2(7) MPPA(5) MPPB(4) 68..263
PRODOM PD111665: MPPA_HUMAN 265..314
PRODOM PD001445: MPPA(5) MPPB(4) UCR1(4) 316..499
PRODOM PD037441: MPPA(2) 501..524
PROSITE INSULINASE: Insulinase family, zinc-bind 97..120
__________________
Plus Strand HSPs:
Score = 166 (58.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/114 (31%), Positives = 60/114 (52%), Frame = +1
Query: 34 VSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGE 213
V + ++I E + + G VD +L RAK S ++MNLESR V+ ED+GRQ L
Sbjct: 401 VREMVEIITKEFILMG--GTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRS 458
Query: 214 RKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYESVSLXFRS 375
RK + + V +D+ ++ K++ +A+ GD+ +P+YE + S
Sbjct: 459 RKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEDIQTALSS 512
>gi|434755|dbj|BAA04643.1| (D21064) similar to rat general mitochondrial matrix
processing protease mRNA (RATMPP). [Homo sapiens]
>gi|1469169|dbj|BAA09472.1| (D50913) The KIAA0123 gene product is
related to rat general mitochondrial matrix processing protease
(MPP). [Homo sapiens]
Length = 528
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 528
0 150 300 450
Plus Strand HSPs:
Score = 166 (58.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/114 (31%), Positives = 60/114 (52%), Frame = +1
Query: 34 VSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGE 213
V + ++I E + + G VD +L RAK S ++MNLESR V+ ED+GRQ L
Sbjct: 404 VREMVEIITKEFILMG--GTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRS 461
Query: 214 RKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYESVSLXFRS 375
RK + + V +D+ ++ K++ +A+ GD+ +P+YE + S
Sbjct: 462 RKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEDIQTALSS 515
>gi|6323192 ref|NP_013264.1| mitochondrial processing protease subunit; Mas1p
>gi|127290|sp|P10507|MPPB_YEAST MITOCHONDRIAL PROCESSING PEPTIDASE
BETA SUBUNIT PRECURSOR (BETA-MPP) (PEP) >gi|83403|pir||S00552
mitochondrial processing peptidase (EC 3.4.99.41) beta chain
precursor - yeast (Saccharomyces cerevisiae)
>gi|3887|emb|CAA30489.1| (X07649) MAS1 precursor protein (462 AA)
[Saccharomyces cerevisiae] >gi|1234852|gb|AAB67487.1| (U51921)
Mitochondrial processing peptidase (Swiss Prot. accession number
P10507) [Saccharomyces cerevisiae]
Length = 462
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 462
0 150 300 450
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 38/116 (32%), Positives = 67/116 (57%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGV---ATPGQVDQAQLNRAKQATKSAILMNLESRMVV 174
G+ + T S+ + + NEIL G++ A++NRAK K+A+L++L+ +
Sbjct: 337 GMYIVTDSN--EHNVQLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAI 394
Query: 175 SEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITS-ISQKLISSPLTMASYGDVLYVPS 345
EDIGRQ +T G+R E+ + VD++T DI + +L + P++M + G+ VP+
Sbjct: 395 VEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPN 452
>gi|127287|sp|P20069|MPPA_RAT MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT
PRECURSOR (ALPHA-MPP) (P-55) >gi|482296|pir||A36205 mitochondrial
processing peptidase (EC 3.4.99.41) alpha chain precursor - rat
>gi|205517|gb|AAA41632.1| (M57728) general mitochondrial matrix
processing protease 55 kDa subunit [Rattus norvegicus]
Length = 524
Frame 1 hits (HSPs): ___________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 524
0 150 300 450
__________________
Annotated Domains:
PFAM Peptidase_M16: Insulinase (Peptidase fam 75..226
PRODOM PD037444: MPPA(2) 1..65
PRODOM PD000718: UCR2(7) MPPA(5) MPPB(4) 67..262
PRODOM PD111676: MPPA_RAT 264..329
PRODOM PD001445: MPPA(5) MPPB(4) UCR1(4) 331..498
PRODOM PD037441: MPPA(2) 500..523
PROSITE INSULINASE: Insulinase family, zinc-bind 96..119
__________________
Plus Strand HSPs:
Score = 158 (55.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 36/114 (31%), Positives = 59/114 (51%), Frame = +1
Query: 34 VSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGE 213
V + ++I E + + VD +L RAK S ++MNLESR V+ ED+GRQ L
Sbjct: 400 VREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHS 457
Query: 214 RKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYESVSLXFRS 375
RK + + V +DI ++ K++ +A+ GD+ +P+YE + S
Sbjct: 458 RKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAALSS 511
>gi|1906032|gb|AAB50243.1| (U90568) mitochondrial processing peptidase alpha
subunit [Blastocladiella emersonii]
Length = 474
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 474
0 150 300 450
Plus Strand HSPs:
Score = 153 (53.9 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 36/110 (32%), Positives = 62/110 (56%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
GI + F ++ A E + +A + ++ RAK KS++LMNLES+++ ED
Sbjct: 333 GISASCVPSFNPHLCNVLAGEFVHMAR--NLSDEEVARAKNQLKSSLLMNLESQVITVED 390
Query: 184 IGRQTLTYGER-KPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVL 333
IGRQ L +R +P+E + + VT D+ +++ L++ P TM + G+ L
Sbjct: 391 IGRQVLAQNQRLEPLE-LVNNISAVTRDDLVRVAEALVAKPPTMVAVGEDL 440
>gi|127286|sp|P23955|MPPA_NEUCR MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA
SUBUNIT PRECURSOR (ALPHA-MPP) >gi|101859|pir||A36442 mitochondrial
processing peptidase (EC 3.4.99.41) alpha chain precursor -
Neurospora crassa
Length = 577
Frame 1 hits (HSPs): _______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 577
0 150 300 450
__________________
Annotated Domains:
DOMO DM00817: INSULINASEFAMILY,ZINC-BINDINGRE 35..547
Entrez Domain: SER-RICH. 259..307
PFAM Peptidase_M16: Insulinase (Peptidase fam 61..209
PRODOM PD111667: MPPA_NEUCR 1..48
PRODOM PD000718: UCR2(7) MPPA(5) MPPB(4) 50..245
PRODOM PD111645: MPPA_NEUCR 247..276
PRODOM PD111616: MPPA_NEUCR 299..350
PRODOM PD001445: MPPA(5) MPPB(4) UCR1(4) 352..530
PRODOM PD111615: MPPA_NEUCR 532..576
PROSITE INSULINASE: Insulinase family, zinc-bind 82..105
__________________
Plus Strand HSPs:
Score = 150 (52.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 27/75 (36%), Positives = 49/75 (65%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
+ +++RAK +S++LMNLESRMV ED+GRQ +G + PV + + ++E+T KD+ +
Sbjct: 465 ELEVSRAKNQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRV 524
Query: 280 SQKLISSPLTMASYG 324
+++++ A G
Sbjct: 525 AKRVVGGMANNAGQG 539
>gi|168841|gb|AAA33597.1| (J05484) matrix processing peptidase [Neurospora
crassa]
Length = 577
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 577
0 150 300 450
Plus Strand HSPs:
Score = 150 (52.8 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 27/75 (36%), Positives = 49/75 (65%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
+ +++RAK +S++LMNLESRMV ED+GRQ +G + PV + + ++E+T KD+ +
Sbjct: 465 ELEVSRAKNQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRV 524
Query: 280 SQKLISSPLTMASYG 324
+++++ A G
Sbjct: 525 AKRVVGGMANNAGQG 539
>gi|6321813 ref|NP_011889.1| 53 kDa subunit of the mitochondrial processing
protease; Mas2p >gi|127288|sp|P11914|MPPA_YEAST MITOCHONDRIAL
PROCESSING PEPTIDASE ALPHA SUBUNIT PRECURSOR (ALPHA-MPP)
>gi|67752|pir||ZPBY mitochondrial processing peptidase (EC
3.4.99.41) alpha chain precursor - yeast (Saccharomyces cerevisiae)
>gi|2949|emb|CAA31804.1| (X13455) MPP protein (AA 1-482)
[Saccharomyces cerevisiae] >gi|500696|gb|AAB68877.1| (U10399)
Mas2p: 53kDa subunit of the mitochondrial processing protease
[Saccharomyces cerevisiae]
Length = 482
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 482
0 150 300 450
Plus Strand HSPs:
Score = 146 (51.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/109 (27%), Positives = 64/109 (58%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGV-ATPG-QVDQAQLNRAKQATKSAILMNLESRMVVS 177
GI ++ +A+++ A ++ A ++ + +++RAK KS++LMNLES++V
Sbjct: 330 GISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVEL 389
Query: 178 EDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYG 324
ED+GRQ L +G + PV + + ++++ DI+ +++ + + + A G
Sbjct: 390 EDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGNG 438
>gi|3889|emb|CAA32262.1| (X14105) processing protease [Saccharomyces
cerevisiae]
Length = 482
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 482
0 150 300 450
Plus Strand HSPs:
Score = 146 (51.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/109 (27%), Positives = 64/109 (58%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGV-ATPG-QVDQAQLNRAKQATKSAILMNLESRMVVS 177
GI ++ +A+++ A ++ A ++ + +++RAK KS++LMNLES++V
Sbjct: 330 GISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVEL 389
Query: 178 EDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYG 324
ED+GRQ L +G + PV + + ++++ DI+ +++ + + + A G
Sbjct: 390 EDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGNG 438
>gi|6513923|gb|AAF14827.1|AC011664_9 (AC011664) putative mitochondrial
processing peptidase [Arabidopsis thaliana]
Length = 531
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 531
0 150 300 450
Plus Strand HSPs:
Score = 138 (48.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 26/87 (29%), Positives = 49/87 (56%), Frame = +1
Query: 91 QVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDI 270
+V A + RA+ KS++L++++ ++EDIGRQ LTYG R P + +D V + +
Sbjct: 433 RVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTV 492
Query: 271 TSISQKLI-SSPLTMASYGDVLYVPSY 348
++ K I + +++ G + +P Y
Sbjct: 493 KRVANKYIYDKDIAISAIGPIQDLPDY 519
>gi|7435861|pir||T08807 mitochondrial processing peptidase (EC 3.4.99.41) beta
chain - human (fragment) >gi|4884457|emb|CAB43319.1| (AL050216)
hypothetical protein [Homo sapiens]
Length = 316
Frame 1 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | | | 316
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 31/118 (26%), Positives = 61/118 (51%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G+ + S V+ + + E + + T V ++++ RA+ K+ +L+ L+ + ED
Sbjct: 191 GLYMVCESSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNMLLQLDGSTPICED 248
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI--SSPLTMASYGDVLYVPSYESV 357
IGRQ L Y R P+ + +D V ++ I + K I SP +A+ G + +P ++ +
Sbjct: 249 IGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIKQLPDFKQI 307
>gi|6409324|gb|AAF07940.1|AF190821_1 (AF190821) mitochondrial processing
peptidase beta subunit [Toxoplasma gondii]
Length = 297
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | 297
0 50 100 150 200 250
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 24/67 (35%), Positives = 43/67 (64%), Frame = +1
Query: 94 VDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDIT 273
V ++ RAK K+ +L +L+S V+EDIGRQ L YG R P+ +FLK ++ + ++++
Sbjct: 185 VTDEEVERAKAQLKTQLLGHLDSTTAVAEDIGRQMLAYGRRMPLAEFLKRLEVIDAEEVK 244
Query: 274 SISQKLI 294
++ K +
Sbjct: 245 RVAWKYL 251
>gi|127289|sp|P11913|MPPB_NEUCR MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT
PRECURSOR (BETA-MPP) (UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE
PROTEIN I) >gi|482261|pir||A29881 mitochondrial processing
peptidase (EC 3.4.99.41) beta chain precursor - Neurospora crassa
>gi|168858|gb|AAA33606.1| (M20928) processing enhancing protein
precursor [Neurospora crassa]
Length = 476
Frame 1 hits (HSPs): _____________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 476
0 150 300 450
__________________
Annotated Domains:
DOMO DM00817: INSULINASEFAMILY,ZINC-BINDINGRE 24..462
Entrez Domain: ASP/GLU-RICH (ACIDIC). 150..178
Entrez metal-binding site: ZINC (BY SIMILARITY) 84
Entrez active site: BY SIMILARITY. 87
Entrez metal-binding site: ZINC (BY SIMILARITY) 88
Entrez metal-binding site: ZINC (BY SIMILARITY) 164
PFAM Peptidase_M16: Insulinase (Peptidase fam 49..198
PRODOM PD111657: MPPB_NEUCR 1..39
PRODOM PD000718: UCR2(7) MPPA(5) MPPB(4) 41..235
PRODOM PD001445: MPPA(5) MPPB(4) UCR1(4) 239..460
PROSITE INSULINASE: Insulinase family, zinc-bind 71..94
__________________
Plus Strand HSPs:
Score = 131 (46.1 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 32/109 (29%), Positives = 59/109 (54%), Frame = +1
Query: 4 GIQVTTGS-DFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSE 180
GI + T D V + + E + + V +A++ RAK K++IL++L+ V+E
Sbjct: 350 GIYLVTDKLDRVDDLVHFSLREWTRLCS--NVSEAEVERAKAQLKASILLSLDGTTAVAE 407
Query: 181 DIGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI-SSPLTMASYGDV 330
DIGRQ +T G R + + +D V++KD+ + K I + +++ G +
Sbjct: 408 DIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAVGSI 458
>gi|3115348|gb|AAC15866.1| (AC004668) mitochondrial processing peptidase beta
subunit precursor; similar to Q03346 (PID:g1171010) [Homo sapiens]
Length = 489
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 489
0 150 300 450
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/118 (26%), Positives = 61/118 (51%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G+ + S V+ + + E + + T V ++++ RA+ K+ +L+ L+ + ED
Sbjct: 364 GLYMVCESSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNMLLQLDGSTPICED 421
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI--SSPLTMASYGDVLYVPSYESV 357
IGRQ L Y R P+ + +D V ++ I + K I SP +A+ G + +P ++ +
Sbjct: 422 IGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIKQLPDFKQI 480
>gi|4758734 ref|NP_004270.1| mitochondrial processing peptidase-beta
>gi|6016597|sp|O75439|MPPB_HUMAN MITOCHONDRIAL PROCESSING PEPTIDASE
BETA SUBUNIT PRECURSOR (BETA-MPP) (P-52) >gi|3342006|gb|AAC39915.1|
(AF054182) mitochondrial processing peptidase beta-subunit [Homo
sapiens]
Length = 489
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 489
0 150 300 450
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/118 (26%), Positives = 61/118 (51%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G+ + S V+ + + E + + T V ++++ RA+ K+ +L+ L+ + ED
Sbjct: 364 GLYMVCESSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNMLLQLDGSTPICED 421
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI--SSPLTMASYGDVLYVPSYESV 357
IGRQ L Y R P+ + +D V ++ I + K I SP +A+ G + +P ++ +
Sbjct: 422 IGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIKQLPDFKQI 480
>gi|477819|pir||B48529 mitochondrial processing peptidase (EC 3.4.99.41) beta
chain precursor - potato >gi|410634|gb|AAB28042.1| cytochrome c
reductase-processing peptidase subunit II, MPP subunit II, P53
[potatoes, var. Marfona, tuber, Peptide Mitochondrial, 530 aa]
Length = 530
Frame 1 hits (HSPs): ___________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 530
0 150 300 450
__________________
Annotated Domains:
DOMO DM06226: MITOCHONDRIALPROCESSINGPEPTIDAS 1..80
DOMO DM00817: INSULINASEFAMILY,ZINC-BINDINGRE 82..516
Entrez domain: transit peptide (mitochondrion) 1..28
PROSITE INSULINASE: Insulinase family, zinc-bind 127..150
__________________
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 32/115 (27%), Positives = 56/115 (48%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G+ SD +S EI + +V A + A KS+++++++ V+ED
Sbjct: 405 GVYAVAKSDCLSDLSYCIMREISKLCY--RVSDADVTHACNQLKSSLMLHIDGTSPVAED 462
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI-SSPLTMASYGDVLYVPSY 348
IGR LTYG R PV + VD V + I ++ + I + +++ G + +P Y
Sbjct: 463 IGRHVLTYGRRIPVTELFARVDAVDASTIKRVANRFIFDQDVAISALGPIQTLPDY 518
>gi|587564|emb|CAA56519.1| (X80235) mitochondrial processing peptidase [Solanum
tuberosum]
Length = 530
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 530
0 150 300 450
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 32/115 (27%), Positives = 56/115 (48%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G+ SD +S EI + +V A + A KS+++++++ V+ED
Sbjct: 405 GVYAVAKSDCLSDLSYCIMREISKLCY--RVSDADVTHACNQLKSSLMLHIDGTSPVAED 462
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI-SSPLTMASYGDVLYVPSY 348
IGR LTYG R PV + VD V + I ++ + I + +++ G + +P Y
Sbjct: 463 IGRHVLTYGRRIPVTELFARVDAVDASTIKRVANRFIFDQDVAISALGPIQTLPDY 518
>gi|5006903|gb|AAD37722.1|AF146393_1 (AF146393) mitochondrial processing
peptidase beta subunit [Lentinula edodes]
Length = 466
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 466
0 150 300 450
Plus Strand HSPs:
Score = 127 (44.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 26/78 (33%), Positives = 46/78 (58%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
+ ++ RAK K+ +L++L+ V+EDIGRQ +T G+R AVD V+ DI +
Sbjct: 371 EGEVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRV 430
Query: 280 SQKLI-SSPLTMASYGDV 330
+QK + +A++G++
Sbjct: 431 AQKYLWDKDFALAAFGNI 448
>gi|7435862|pir||JC6525 processing peptidase (EC 3.4.-.-) beta chain,
mitochondrial - shiitake mushroom
Length = 466
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 466
0 150 300 450
Plus Strand HSPs:
Score = 127 (44.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 26/78 (33%), Positives = 46/78 (58%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
+ ++ RAK K+ +L++L+ V+EDIGRQ +T G+R AVD V+ DI +
Sbjct: 371 EGEVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRV 430
Query: 280 SQKLI-SSPLTMASYGDV 330
+QK + +A++G++
Sbjct: 431 AQKYLWDKDFALAAFGNI 448
>gi|7510736|pir||T27548 hypothetical protein ZC410.2 - Caenorhabditis elegans
>gi|3881380|emb|CAA92566.1| (Z68270) Similarity to Rat
mitochondrial processing peptidase beta chain (PIR Acc. No.
S36390)~cDNA EST EMBL:M89221 comes from this gene [Caenorhabditis
elegans]
Length = 485
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 485
0 150 300 450
Plus Strand HSPs:
Score = 127 (44.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/117 (27%), Positives = 62/117 (52%), Frame = +1
Query: 22 GSDFVS--KAIDIAANEILG--VATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIG 189
G+ FV+ ++ID + +L V +D+A ++RAK++ + +L+ L+ V EDIG
Sbjct: 361 GTYFVAAPESIDNLIDSVLQQWVWLANNIDEAAVDRAKRSLHTNLLLMLDGSTPVCEDIG 420
Query: 190 RQTLTYGERKPVEDFLKAVDEVTSKDITSISQKL-ISSPLTMASYGDVLYVPSYESV 357
RQ L YG R P + ++ +T + + + +++ + ++ A G Y P E +
Sbjct: 421 RQLLCYGRRIPTPELHARIESITVQQLRDVCRRVFLEGQVSAAVVGKTQYWPVNEEI 477
>gi|7299936|gb|AAF55110.1| (AE003706) CG3731 gene product [Drosophila
melanogaster]
Length = 382
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 382
0 150 300
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 27/89 (30%), Positives = 48/89 (53%), Frame = +1
Query: 94 VDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDIT 273
V +A++ RAK K+ +L+ L+ + EDIGRQ L Y R P+ + + +D V+ ++
Sbjct: 285 VTEAEVERAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRIPLHELEQRIDAVSVGNVR 344
Query: 274 SISQKLISSPL-TMASYGDVLYVPSYESV 357
++ K I +A+ G V +P Y +
Sbjct: 345 DVAMKYIYDRCPAVAAVGPVENLPDYNRI 373
>gi|6723969|emb|CAB66443.1| (AL136535) probable mitochondrial processing
peptidase beta subunit precursor [Schizosaccharomyces pombe]
Length = 457
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | || 457
0 150 300 450
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 23/87 (26%), Positives = 52/87 (59%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
+A++ RAK ++++L++L+S ++EDIGRQ LT G R ++ + ++T KD+ +
Sbjct: 362 RAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARV 421
Query: 280 SQKLI-SSPLTMASYGDVLYVPSYESV 357
+ ++I + +++ G + + Y +
Sbjct: 422 ASEMIWDKDIAVSAVGSIEGLLDYNRI 448
>gi|7435859|pir||T42428 probable mitochondrial processing peptidase (EC
3.4.99.41) beta chain - fission yeast (Schizosaccharomyces pombe)
>gi|1749512|dbj|BAA13814.1| (D89152) similar to Saccharomyces
serevisiae mitochondrial processing peptidase beta subunit
precursor, SWISS-PROT Accession Number P10507 [Schizosaccharomyces
pombe]
Length = 453
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | || 453
0 150 300 450
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 22/78 (28%), Positives = 49/78 (62%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
+A++ RAK ++++L++L+S ++EDIGRQ LT G R ++ + ++T KD+ +
Sbjct: 362 RAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARV 421
Query: 280 SQKLI-SSPLTMASYGDV 330
+ ++I + +++ G +
Sbjct: 422 ASEMIWDKDIAVSAVGSI 439
>gi|7522428|pir||T39763 mitochondrial processing peptidase alpha subunit -
fission yeast (Schizosaccharomyces pombe) >gi|7522429|pir||T39947
mitochondrial processing peptidase alpha subunit - fission yeast
(Schizosaccharomyces pombe) >gi|4106679|emb|CAA22618.1| (AL035065)
mitochondrial processing peptidase alpha subunit
[Schizosaccharomyces pombe] >gi|4107331|emb|CAA22672.1| (AL035077)
mitochondrial processing peptidase alpha subunit
[Schizosaccharomyces pombe]
Length = 494
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 494
0 150 300 450
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 31/107 (28%), Positives = 56/107 (52%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G+ VT D A + E+ V + RAK KS++LMNLESRM+ ED
Sbjct: 360 GMFVTILDDAAHLAAPLIIRELCNTVL--SVTSEETERAKNQLKSSLLMNLESRMISLED 417
Query: 184 IGRQTLTY-GERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYG 324
+GRQ T G ++ ++ +D +T D++ +++++++ ++ G
Sbjct: 418 LGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRVLTGNVSNPGNG 465
>gi|2117356|pir||I52367 core I protein - human >gi|468935|dbj|BAA05495.1|
(D26485) core I protein [Homo sapiens]
Length = 480
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 480
0 150 300 450
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 26/87 (29%), Positives = 46/87 (52%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
++++ R K ++A++ +L+ V EDIGR LTYG R P+ ++ + EV + + I
Sbjct: 385 ESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREI 444
Query: 280 SQKLISSPL-TMASYGDVLYVPSYESV 357
K I +A YG + +P Y +
Sbjct: 445 CSKYIYDQCPAVAGYGPIEQLPDYNRI 471
>gi|4507841 ref|NP_003356.1| ubiquinol-cytochrome c reductase core protein I
>gi|731047|sp|P31930|UCR1_HUMAN UBIQUINOL-CYTOCHROME C REDUCTASE
COMPLEX CORE PROTEIN I PRECURSOR >gi|1082896|pir||A48043
ubiquinol--cytochrome-c reductase (EC 1.10.2.2) core protein I -
human >gi|515634|gb|AAA20046.1| (L16842) ubiquinol-cytochrome c
reductase core I protein [Homo sapiens]
Length = 480
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 480
0 150 300 450
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 26/87 (29%), Positives = 46/87 (52%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
++++ R K ++A++ +L+ V EDIGR LTYG R P+ ++ + EV + + I
Sbjct: 385 ESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREI 444
Query: 280 SQKLISSPL-TMASYGDVLYVPSYESV 357
K I +A YG + +P Y +
Sbjct: 445 CSKYIYDQCPAVAGYGPIEQLPDYNRI 471
>gi|3659967|pdb|1BCC|A Chain A, Cytochrome Bc1 Complex From Chicken
>gi|3660376|pdb|3BCC|A Chain A, Stigmatellin And Antimycin Bound
Cytochrome Bc1 Complex From Chicken >gi|5822457|pdb|2BCC|A Chain A,
Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken
Length = 446
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 446
0 150 300
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 25/89 (28%), Positives = 50/89 (56%), Frame = +1
Query: 94 VDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDIT 273
+ ++++ R K ++A++ +L+ V EDIGR+ LTYG R P+E++ + + EV ++ +
Sbjct: 349 ISESEVLRGKNFLRNALVSHLDGTTPVCEDIGRELLTYGRRIPLEEWEERLAEVDARMVR 408
Query: 274 SISQKLISSPL-TMASYGDVLYVPSYESV 357
+ K I +A G + +P Y +
Sbjct: 409 EVCSKYIYDQCPAVAGPGPIEQLPDYNRI 437
>gi|1145777|gb|AAC63093.1| (U41300) mitochondrial processing peptidase beta
subunit 1 [Blastocladiella emersonii]
Length = 465
Frame 1 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | 465
0 150 300 450
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 33/118 (27%), Positives = 59/118 (50%), Frame = +1
Query: 4 GIQVTTGS-DFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSE 180
GI + + + D + E + +AT + + AKQ K+++L+ L+ V+E
Sbjct: 339 GIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAI--AKQQLKTSLLLALDGTTPVAE 396
Query: 181 DIGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI-SSPLTMASYGDVLYVPSYESV 357
+IGRQ L YG R + + VD VT +D+ ++ + I L + + G V +P Y +
Sbjct: 397 EIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVAVGPVECLPDYNRI 456
>gi|7435860|pir||T02849 mitochondrial processing proteinase homolog MPP -
Leishmania major >gi|2266917|gb|AAC24672.1| (AE001274) MPP; L1439.1
[Leishmania major]
Length = 494
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 494
0 150 300 450
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 27/92 (29%), Positives = 54/92 (58%), Frame = +1
Query: 91 QVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDI 270
+V+ + L AK K++++M +S +ED+GRQ + +G R P+++ + VD VT + +
Sbjct: 380 KVEDSLLEAAKAEFKASVMMMRDSTTNSAEDLGRQMIHFGRRVPLQEVFERVDAVTPESL 439
Query: 271 TSISQKLIS--SPLTMASYGDVLYVPSYESVSL 363
+ ++K + P T++ G +P Y+ +SL
Sbjct: 440 RAAAEKYLGVVQP-TVSCIGASSTLPKYDPLSL 471
>gi|477280|pir||A48529 mitochondrial processing peptidase (EC 3.4.99.41) 55K
protein precursor - potato >gi|410633|gb|AAB28041.1| cytochrome c
reductase-processing peptidase subunit I, MPP subunit I, P55
[potatoes, var. Marfona, tuber, Peptide Mitochondrial, 534 aa]
Length = 534
Frame 1 hits (HSPs): ___________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 534
0 150 300 450
__________________
Annotated Domains:
DOMO DM06226: MITOCHONDRIALPROCESSINGPEPTIDAS 1..80
DOMO DM00817: INSULINASEFAMILY,ZINC-BINDINGRE 82..520
Entrez domain: transit peptide (mitochondrion) 1..32
PROSITE INSULINASE: Insulinase family, zinc-bind 130..153
__________________
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/115 (25%), Positives = 57/115 (49%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G+ D +S + N I ++ +V A + RA+ KS+++++++ +ED
Sbjct: 409 GVYAEAKPDCLSDLAYVIMNGICKLSY--KVSDADVVRARNQLKSSLMLHIDGSGPTAED 466
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI-SSPLTMASYGDVLYVPSY 348
IGRQ +TYG R P + +D V + I + + I + +++ G + +P Y
Sbjct: 467 IGRQLITYGRRIPYAELFSRIDSVDTGTIKRVRNRFIFDRDVAISARGPIQDLPDY 522
>gi|587566|emb|CAA56521.1| (X80237) mitochondrial processing peptidase [Solanum
tuberosum]
Length = 534
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 534
0 150 300 450
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/115 (25%), Positives = 57/115 (49%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G+ D +S + N I ++ +V A + RA+ KS+++++++ +ED
Sbjct: 409 GVYAEAKPDCLSDLAYVIMNGICKLSY--KVSDADVVRARNQLKSSLMLHIDGSGPTAED 466
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLI-SSPLTMASYGDVLYVPSY 348
IGRQ +TYG R P + +D V + I + + I + +++ G + +P Y
Sbjct: 467 IGRQLITYGRRIPYAELFSRIDSVDTGTIKRVRNRFIFDRDVAISARGPIQDLPDY 522
>gi|418146|sp|P32551|UCR2_RAT UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE
PROTEIN 2 PRECURSOR (COMPLEX III SUBUNIT II) >gi|320069|pir||S29510
ubiquinol--cytochrome-c reductase (EC 1.10.2.2) core protein II
precursor - rat
Length = 452
Frame 1 hits (HSPs): _____________
Annotated Domains: _________________________ ______________________
__________________________________________________
Database sequence: | | | || 452
0 150 300 450
__________________
Annotated Domains:
PFAM Peptidase_M16: Insulinase (Peptidase fam 46..193
PRODOM PD023165: UCR2(3) 1..33
PRODOM PD000718: UCR2(7) MPPA(5) MPPB(4) 35..225
PRODOM PD001445: MPPA(5) MPPB(4) UCR1(4) 246..440
PROSITE INSULINASE: Insulinase family, zinc-bind 67..90
__________________
Plus Strand HSPs:
Score = 119 (41.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/113 (26%), Positives = 52/113 (46%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
GI + + I+ A N++ VA G + A + AK K+ LM++E+ +
Sbjct: 336 GIYTVSQAAAAGDVINAAYNQVKAVAQ-GNLSSADVQAAKNKLKAGYLMSVETSEGFLSE 394
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVP 342
IG Q L G P L+ +D V D+ ++K +S +M + G++ P
Sbjct: 395 IGSQALATGSYMPPPTVLQQIDAVADADVVKAAKKFVSGKKSMTASGNLGNTP 447
>gi|397699|dbj|BAA03007.1| (D13907) mitochondrial processing protease [Rattus
norvegicus]
Length = 487
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | 487
0 150 300 450
Plus Strand HSPs:
Score = 118 (41.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/94 (28%), Positives = 49/94 (52%), Frame = +1
Query: 94 VDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDIT 273
V ++++ RAK K+ +L+ L+ + EDIGRQ L Y R P+ + +D V ++ +
Sbjct: 390 VSESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVR 449
Query: 274 SISQKLI--SSPLTMASYGDVLYVPSYESVSLXFR 372
+ K I SP +A+ G + +P + + R
Sbjct: 450 EVCTKYIYGKSP-AIAALGPIERLPDFNQICSNMR 483
>gi|1171010|sp|Q03346|MPPB_RAT MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT
PRECURSOR (BETA-MPP) (P-52) >gi|480071|pir||S36390 mitochondrial
processing peptidase (EC 3.4.99.41) beta chain precursor - rat
>gi|294589|gb|AAA41633.1| (L12965) mitochondrial processing
peptidase beta-subunit [Rattus norvegicus]
Length = 489
Frame 1 hits (HSPs): ___________
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | 489
0 150 300 450
__________________
Annotated Domains:
DOMO DM00817: INSULINASEFAMILY,ZINC-BINDINGRE 41..475
Entrez metal-binding site: ZINC (BY SIMILARITY) 101
Entrez active site: BY SIMILARITY. 104
Entrez metal-binding site: ZINC (BY SIMILARITY) 105
PFAM Peptidase_M16: Insulinase (Peptidase fam 67..215
PRODOM PD037443: MPPB(2) O60416(1) 3..57
PRODOM PD000718: UCR2(7) MPPA(5) MPPB(4) 59..252
PRODOM PD001445: MPPA(5) MPPB(4) UCR1(4) 267..473
PROSITE INSULINASE: Insulinase family, zinc-bind 88..111
__________________
Plus Strand HSPs:
Score = 118 (41.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/94 (28%), Positives = 49/94 (52%), Frame = +1
Query: 94 VDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDIT 273
V ++++ RAK K+ +L+ L+ + EDIGRQ L Y R P+ + +D V ++ +
Sbjct: 392 VSESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVR 451
Query: 274 SISQKLI--SSPLTMASYGDVLYVPSYESVSLXFR 372
+ K I SP +A+ G + +P + + R
Sbjct: 452 EVCTKYIYGKSP-AIAALGPIERLPDFNQICSNMR 485
>gi|3891848|pdb|1QCR|A Chain A, Crystal Structure Of Bovine Mitochondrial
Cytochrome Bc1 Complex, Alpha Carbon Atoms Only
Length = 446
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 446
0 150 300
Plus Strand HSPs:
Score = 115 (40.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/87 (27%), Positives = 46/87 (52%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
++++ R K ++A++ +L+ V EDIGR LTYG R P+ ++ + EV ++ + +
Sbjct: 351 ESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREV 410
Query: 280 SQKLISSPL-TMASYGDVLYVPSYESV 357
K +A +G V +P Y +
Sbjct: 411 CSKYFYDQCPAVAGFGPVEQLPDYNRI 437
>gi|5902674|gb|AAC79673.2| (AF034644) putative cytochrome bc-1 complex core
protein [Haematobia irritans irritans]
Length = 246
Frame 1 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | | 246
0 50 100 150 200
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 31/117 (26%), Positives = 57/117 (48%), Frame = +1
Query: 4 GIQVTTGSDFVSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSED 183
G V+T + KA+D + G V +NR K K A+L + + +
Sbjct: 132 GFVVSTEAQNAGKAVDALTRALKS----GSVSAEDVNRGKALLKVAVLDAYSTDSSLIAE 187
Query: 184 IGRQTLTYGERKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYGDVLYVPSYES 354
+G Q + + + + + A+D VT +D+ S ++K SS L++ + G++ +VP Y S
Sbjct: 188 MGLQAVLTKDVQSADALVSAIDGVTQQDVQSAAKKAGSSKLSVGAVGNLAHVP-YAS 243
>gi|4139392|pdb|1BGY|A Chain A, Cytochrome Bc1 Complex From Bovine
>gi|4139403|pdb|1BGY|M Chain M, Cytochrome Bc1 Complex From Bovine
>gi|4389306|pdb|1BE3|A Chain A, Cytochrome Bc1 Complex From Bovine
Length = 446
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 446
0 150 300
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 23/87 (26%), Positives = 46/87 (52%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
++++ R K ++A++ +L+ V EDIGR LTYG R P+ ++ + EV ++ + +
Sbjct: 351 ESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREV 410
Query: 280 SQKLISSPL-TMASYGDVLYVPSYESV 357
K +A +G + +P Y +
Sbjct: 411 CSKYFYDQCPAVAGFGPIEQLPDYNRI 437
>gi|1730447|emb|CAA42213.1| (X59692) ubiquinol--cytochrome c reductase [Bos
taurus]
Length = 480
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | 480
0 150 300 450
Plus Strand HSPs:
Score = 114 (40.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 23/87 (26%), Positives = 46/87 (52%), Frame = +1
Query: 100 QAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLKAVDEVTSKDITSI 279
++++ R K ++A++ +L+ V EDIGR LTYG R P+ ++ + EV ++ + +
Sbjct: 385 ESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREV 444
Query: 280 SQKLISSPL-TMASYGDVLYVPSYESV 357
K +A +G + +P Y +
Sbjct: 445 CSKYFYDQCPAVAGFGPIEQLPDYNRI 471
>gi|1174864|sp|P43264|UCR1_EUGGR UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE
PROTEIN I PRECURSOR >gi|1076200|pir||JX0300 ubiquinol--cytochrome-c
reductase (EC 1.10.2.2) chain I precursor - Euglena gracilis
mitochondrion >gi|464153|dbj|BAA04079.1| (D16671) complex III
subunit I precursor [Euglena gracilis]
Length = 494
Frame 1 hits (HSPs): ________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 494
0 150 300 450
__________________
Annotated Domains:
BLOCKS BL00143A: Insulinase family, zinc-bindin 54..80
BLOCKS BL00143B: Insulinase family, zinc-bindin 100..114
BLOCKS BL00143C: Insulinase family, zinc-bindin 203..215
DOMO DM00817: INSULINASEFAMILY,ZINC-BINDINGRE 10..462
Entrez metal-binding site: ZINC (BY SIMILARITY) 70
Entrez active site: BY SIMILARITY. 73
Entrez metal-binding site: ZINC (BY SIMILARITY) 74
Entrez metal-binding site: ZINC (BY SIMILARITY) 150
PFAM Peptidase_M16: Insulinase (Peptidase fam 36..184
PRODOM PD111643: UCR1_EUGGR 1..30
PRODOM PD000718: UCR2(7) MPPA(5) MPPB(4) 32..221
PRODOM PD001445: MPPA(5) MPPB(4) UCR1(4) 225..447
PRODOM PD111617: UCR1_EUGGR 449..493
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 349..356
PROSITE INSULINASE: Insulinase family, zinc-bind 57..80
__________________
Plus Strand HSPs:
Score = 111 (39.1 bits), Expect = 0.00011, P = 0.00011
Identities = 20/80 (25%), Positives = 45/80 (56%), Frame = +1
Query: 55 AANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDF 234
A E++ V+ + + + RAK K ++ L+ +++DIGRQ L++G R P+ F
Sbjct: 368 AMRELIRVSR--NISEEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASF 425
Query: 235 LKAVDEVTSKDITSISQKLI 294
+ +D ++ +D+ + +++
Sbjct: 426 FEQLDAISREDLIRVGPRVL 445
>gi|6686234|sp|O33324|YR82_MYCTU HYPOTHETICAL ZINC PROTEASE RV2782C
>gi|7435863|pir||E70883 probable proteinase pepR - Mycobacterium
tuberculosis (strain H37RV) >gi|2624304|emb|CAA15577.1| (AL008967)
pepR [Mycobacterium tuberculosis]
Length = 438
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 438
0 150 300
Plus Strand HSPs:
Score = 103 (36.3 bits), Expect = 0.0013, P = 0.0013
Identities = 20/82 (24%), Positives = 47/82 (57%), Frame = +1
Query: 52 IAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVED 231
+ A+ + VA G + +A+ AK + + +++ LE +GR L YG+ + +E
Sbjct: 332 VTADVLESVARDG-ITEAECGIAKGSLRGGLVLGLEDSSSRMSRLGRSELNYGKHRSIEH 390
Query: 232 FLKAVDEVTSKDITSISQKLIS 297
L+ +++VT +++ ++++ L+S
Sbjct: 391 TLRQIEQVTVEEVNAVARHLLS 412
>gi|6686233|sp|O32965|YR82_MYCLE HYPOTHETICAL ZINC PROTEASE MLCB22.26C
>gi|2342618|emb|CAB11391.1| (Z98741) protease/peptidase
[Mycobacterium leprae]
Length = 445
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 445
0 150 300
Plus Strand HSPs:
Score = 102 (35.9 bits), Expect = 0.0026, P = 0.0026
Identities = 22/88 (25%), Positives = 45/88 (51%), Frame = +1
Query: 61 NEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLK 240
+E+L + +A+ AK + + I++ LE +GR L YG+ + +E L+
Sbjct: 341 SEVLASVAGDGITEAECRIAKGSLRGGIILGLEDSNSWMSRLGRSELNYGKYRGIEHTLQ 400
Query: 241 AVDEVTSKDITSISQKLISSPLTMASYG 324
+DEVT + + +++ +L++ A G
Sbjct: 401 QIDEVTVEQVNALAHQLLNKRYGAAVLG 428
>gi|6686160|sp|O86835|YA12_STRCO HYPOTHETICAL ZINC PROTEASE SC9A10.02
>gi|7481213|pir||T35838 probable proteinase - Streptomyces
coelicolor >gi|3413821|emb|CAA20289.1| (AL031260) putative protease
[Streptomyces coelicolor A3(2)]
Length = 459
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 459
0 150 300 450
Plus Strand HSPs:
Score = 93 (32.7 bits), Expect = 0.13, P = 0.12
Identities = 23/97 (23%), Positives = 48/97 (49%), Frame = +1
Query: 34 VSKAIDIAANEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGE 213
V + I +E+ VA G D ++ RA + + ++ LE + IG+ L +GE
Sbjct: 349 VHDVLKICRDELDHVAEHGLTDD-EIGRAVGQLQGSTVLGLEDTGALMNRIGKSELCWGE 407
Query: 214 RKPVEDFLKAVDEVTSKDITSISQKLISSPLTMASYG 324
+ V+D L + VT D+ ++++ ++ +++ G
Sbjct: 408 QMSVDDMLARIASVTPDDVRAVARDVLGRRPSLSVIG 444
>gi|6686079|sp|O05945|Y219_RICPR HYPOTHETICAL ZINC PROTEASE RP219
>gi|7467888|pir||C71733 mitochondrial proteinase (mpp) RP219 -
Rickettsia prowazekii >gi|2073473|emb|CAA72467.1| (Y11780)
hypothetical processing peptidase [Rickettsia prowazekii]
>gi|3860781|emb|CAA14682.1| (AJ235270) MITOCHONDRIAL PROTEASE (mpp)
[Rickettsia prowazekii]
Length = 412
Frame 1 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | 412
0 150 300
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 0.21, P = 0.19
Identities = 23/88 (26%), Positives = 43/88 (48%), Frame = +1
Query: 61 NEILGVATPGQVDQAQLNRAKQATKSAILMNLESRMVVSEDIGRQTLTYGERKPVEDFLK 240
NEI+ + V ++ RAK +S + M E SE+IG+ +G+ E+ ++
Sbjct: 320 NEIIKITET--VSTEEIIRAKMQLRSNLQMAQEQNTYKSEEIGKNYSVFGKYILPEEIIE 377
Query: 241 AVDEVTSKDITSISQKLISSPLTMASYG 324
+ + + DI + + K+ S T+A G
Sbjct: 378 IITNIRADDIINTANKIFSGTTTLAIIG 405
>gi|633902|gb|AAB30493.1| cytochrome-c reductase 51 kda subunit {P1 peptide}
{EC 1.10.2.2.} [Solanum tuberosum=potatoes, cv. Hansa, Peptide
Mitochondrial Partial, 21 aa]
Length = 21
Frame 1 hits (HSPs): ________________________________________________
__________________________________________________
Database sequence: | | | 21
0 20
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 0.33, P = 0.28
Identities = 13/20 (65%), Positives = 16/20 (80%), Frame = +1
Query: 64 EILGVATPGQVDQAQLNRAK 123
E++ VA P +VDQ QLNRAK
Sbjct: 2 ELIAVANPSEVDQVQLNRAK 21
WARNING: HSPs involving 5 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.351 0.155 0.620
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.363 0.161 0.589
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.325 0.138 0.379
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.334 0.141 0.438
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.361 0.163 0.603
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.355 0.158 0.579
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 144 143 10. 73 3 12 22 0.12 33
30 0.11 36
+2 0 144 143 10. 73 3 12 22 0.12 33
30 0.11 36
+1 0 144 142 10. 72 3 12 22 0.12 33
30 0.11 36
-1 0 144 143 10. 73 3 12 22 0.12 33
30 0.11 36
-2 0 144 143 10. 73 3 12 22 0.12 33
30 0.11 36
-3 0 144 142 10. 72 3 12 22 0.12 33
30 0.11 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 8:50 PM CDT May 27, 2000
Format: BLAST
# of letters in database: 158,518,215
# of sequences in database: 505,245
# of database sequences satisfying E: 55
No. of states in DFA: 594 (59 KB)
Total size of DFA: 187 KB (192 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 183.10u 1.10s 184.20t Elapsed: 00:00:58
Total cpu time: 183.21u 1.14s 184.35t Elapsed: 00:00:58
Start: Wed Feb 14 20:36:56 2001 End: Wed Feb 14 20:37:54 2001
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000