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UniSTS:66011 Links
STS-T97010
Homo sapiens chromosome 15, locus SPG11
Macaca mulatta chromosome 7, locus LOC712221
Pan troglodytes chromosome 15, locus SPG11

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:TCCAGAAACTTTGAGAGAACC
Reverse primer:AGATACTGTGGCTGAACTCG
PCR product size:185 (bp), Homo sapiens

   Homo sapiens
Name: STS-T97010
Also known as: sts-T97010
Polymorphism info:  

Cross References Help
Gene GeneID:80208
 Symbol:SPG11
 Description:spastic paraplegia 11 (autosomal recessive)
 Position:15q14
UniGeneHs.656271 Spastic paraplegia 11 (autosomal recessive)
 Hs.700877 Transcribed locus, moderately similar to NP_079413.3 hypothetical protein LO...

Mapping InformationHelp
STS-T97010 Sequence Map: Chr 15|HuRef Map Viewer
  Position: 21689287-21689472 (bp)
 
STS-T97010 Sequence Map: Chr 15|Celera Map Viewer
  Position: 21755380-21755565 (bp)
 
STS-T97010 Sequence Map: Chr 15 Map Viewer
  Position: 42652919-42653104 (bp)
 
sts-T97010 NCBI RH Map: Chr 15 Map Viewer
  Position: 169.1 (cR)
  Lod score: 1.06
 
sts-T97010 GeneMap99-GB4 Map: Chr 15 Map Viewer
  Position: 160.64 (cR3000)
  Lod score: 0.14
  Reference Interval: D15S146-D15S117

Electronic PCR results Help
mRNA (1)
AK091176.1 2528 .. 2713 (186 bp)  
 
Genomic (5 of 7)[Show All Hits]
G25473.1 16 .. 200 (185 bp)  
AC009996.7 59255 .. 59440 (186 bp)  
CH003462.1 21208182 .. 21208367 (186 bp)  
CH471082.1 853197 .. 853382 (186 bp)  
CM000266.1 21755380 .. 21755565 (186 bp)  
 
Working Draft phase 1 (from GenBank HTGS division) (1)
AC009821.3 57509 .. 57694 (186 bp)  
 
ESTs (5 of 8)[Show All Hits]
T97010.1 16 .. 200 (185 bp)  
W88766.1 42 .. 227 (186 bp)  
AA004933.1 42 .. 227 (186 bp)  
AA701859.1 42 .. 227 (186 bp)  
AI762069.1 73 .. 258 (186 bp)  
 
Whole Genome Shotgun sequences (3)
AADD01142844.1 6274 .. 6459 (186 bp)  
AADB02016428.1 853197 .. 853382 (186 bp)  
ABBA01039203.1 2290 .. 2475 (186 bp)  
 

   Macaca mulatta
Name: STS-T97010
Polymorphism info:  

Cross References Help
Gene GeneID:712221
 Symbol:LOC712221
 Description:hypothetical protein LOC712221
 Position: 

Mapping InformationHelp
STS-T97010 Sequence Map: Chr 7 Map Viewer
  Position: 22987518-22987703 (bp)

   Pan troglodytes
Name: STS-T97010
Polymorphism info:  

Cross References Help
Gene GeneID:453711
 Symbol:SPG11
 Description:spastic paraplegia 11 (autosomal recessive)
 Position: 

Mapping InformationHelp
STS-T97010 Sequence Map: Chr 15 Map Viewer
  Position: 41717234-41717419 (bp)

Electronic PCR results Help
Genomic (1)
CM000329.1 41717234 .. 41717419 (186 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01219587.1 14332 .. 14517 (186 bp)  
AACZ02154617.1 14863 .. 15048 (186 bp)  
 

 

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