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Bos taurus
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UniSTS:6186 Links
STS-H39845
Homo sapiens chromosome 9, locus SNAPC3
Macaca mulatta chromosome 15, locus LOC713554
Pan troglodytes chromosome 9, locus SNAPC3

Found by e-PCR in sequences from Bos taurus, Homo sapiens, Pan troglodytes and Rattus norvegicus.

Primer InformationHelp

Forward primer:AATGGAAGACCTGGGC
Reverse primer:GGGGACATGGAAAAATC
PCR product size:139 (bp), Homo sapiens

   Bos taurus
 
Polymorphism info:  

Electronic PCR results Help
Working Draft phase 1 (from GenBank HTGS division) (1)
AC222731.1 120565 .. 121678 (1114 bp)  
 
Whole Genome Shotgun sequences (1)
AAFC03064971.1 24121 .. 25234 (1114 bp)  
 

   Homo sapiens
Name: STS-H39845
Also known as: sts-H39845
Polymorphism info:  

Cross References Help
Gene GeneID:6619
 Symbol:SNAPC3
 Description:small nuclear RNA activating complex, polypeptide 3, 50kDa
 Position:9p22.3
UniGeneHs.546299 Small nuclear RNA activating complex, polypeptide 3, 50kDa

Mapping InformationHelp
STS-H39845 Sequence Map: Chr 9|Celera Map Viewer
  Position: 15394295-15394433 (bp)
 
STS-H39845 Sequence Map: Chr 9|HuRef Map Viewer
  Position: 15424568-15424706 (bp)
 
STS-H39845 Sequence Map: Chr 9 Map Viewer
  Position: 15450947-15451085 (bp)
 
sts-H39845 NCBI RH Map: Chr 9 Map Viewer
  Position: 220.1 (cR)
  Lod score: 1.34
 
sts-H39845 GeneMap99-GB4 Map: Chr 9 Map Viewer
  Position: 59.13 (cR3000)
  Lod score: 0.00
  Reference Interval: D9S1808-D9S162

Electronic PCR results Help
RefSeq mRNA (1)
NM_001039697.1 2415 .. 2553 (139 bp)  
 
Genomic (5 of 9)[Show All Hits]
G30507.1 37 .. 175 (139 bp)  
AL441925.16 50955 .. 51093 (139 bp)  
AF199339.2 34183 .. 34321 (139 bp)  
CH003456.1 15488936 .. 15489074 (139 bp)  
CH003504.1 15879117 .. 15879255 (139 bp)  
 
ESTs (5 of 19)[Show All Hits]
H39845.1 37 .. 175 (139 bp)  
H85161.1 231 .. 370 (140 bp)  
N67746.1 50 .. 188 (139 bp)  
AA155722.1 53 .. 191 (139 bp)  
AA423935.1 211 .. 349 (139 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01098084.1 16007 .. 16145 (139 bp)  
AADC01081433.1 18127 .. 18265 (139 bp)  
AADB02012456.1 73265 .. 73403 (139 bp)  
ABBA01065278.1 49316 .. 49454 (139 bp)  
 

   Macaca mulatta
Name: STS-H39845
Polymorphism info:  

Cross References Help
Gene GeneID:713554
 Symbol:LOC713554
 Description:similar to small nuclear RNA activating complex, polypeptide 3 (predicted)
 Position: 
UniGeneMmu.13298 Similar to small nuclear RNA activating complex, polypeptide 3 (predicted)

Mapping InformationHelp
STS-H39845 Sequence Map: Chr 15 Map Viewer
  Position: 61429563-61429701 (bp)

   Pan troglodytes
Name: STS-H39845
Polymorphism info:  

Cross References Help
Gene GeneID:473177
 Symbol:SNAPC3
 Description:small nuclear RNA activating complex, polypeptide 3, 50kDa
 Position: 

Mapping InformationHelp
STS-H39845 Sequence Map: Chr 9 Map Viewer
  Position: 15842027-15842165 (bp)

Electronic PCR results Help
RefSeq mRNA (2)
XM_528547.2 2503 .. 2641 (139 bp)  
XM_001148816.1 2353 .. 2491 (139 bp)  
 
Genomic (1)
CM000323.1 15842027 .. 15842165 (139 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01241152.1 3698 .. 3836 (139 bp)  
AACZ02102453.1 18270 .. 18408 (139 bp)  
 

   Rattus norvegicus
 
Polymorphism info:  

Electronic PCR results Help
Working Draft phase 1 (from GenBank HTGS division) (2)
AC123374.3 329033 .. 329171 (139 bp)  
AC106354.4 126170 .. 127314 (1145 bp)  
 

 

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