| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 146259 | hypothetical | BPSL1483 | putative DNA-binding protein Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YjeB or b4178 or z5785 or ecs5154 SWALL:YJEB_ECOLI (SWALL:P21498) (141 aa) fasta scores: E(): 7.2e-18, 38.62% id in 145 aa, and to Ralstonia solanacearum hypothetical protein rsc3397 or rs01705 SWALL:Q8XTZ8 (EMBL:AL646075) (172 aa) fasta scores: E(): 2.9e-24, 47.61% id in 168 aa | genbank | 52209531 | CAH35484.1 | 165 | 1720059 | 1720556 | |
| 146260 | clpB | hypothetical | BPSL1484 | ClpB heat-shock protein Similar to Escherichia coli, and Escherichia coli O157:H7 ClpB protein or HtpM or b2592 or z3886 or ecs3455 SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 2e-185, 66.04% id in 860 aa, and to Ralstonia solanacearum probable ATP-dependent protease rsc1335 or rs02857 SWALL:Q8XZR0 (EMBL:AL646064) (862 aa) fasta scores: E(): 0, 80.2% id in 864 aa. Note: Also similar to BPSL0899 (773 aa) fasta scores: E(): 5.2e-47, 39.789% identity in 852 aa overlap and to BPSS1502 (Chromosome 2) (1013 aa) fasta scores: E(): 1.2e-48, 37.646% identity in 943 aa overlap | genbank | 52209532 | CAH35485.1 | 876 | 1720727 | 1723357 |
| 146261 | hypothetical | BPSL1485 | conserved hypothetical protein Similar to Escherichia coli hypothetical protein YidB or b3698 SWALL:YIDB_ECOLI (SWALL:P09996) (132 aa) fasta scores: E(): 1.1e-09, 37.39% id in 115 aa, and to Rhizobium loti hypothetical protein mlr4715 SWALL:Q98DG3 (EMBL:AP003004) (165 aa) fasta scores: E(): 1.9e-08, 33.85% id in 127 aa | genbank | 52209533 | CAH35486.1 | 140 | 1723606 | 1724028 | |
| 146262 | hypothetical | BPSL1486 | hypothetical protein Only central part similar to Ralstonia solanacearum putative COMEA-related signal peptide protein rsc0916 or rs04499 SWALL:Q8Y0X7 (EMBL:AL646061) (105 aa) fasta scores: E(): 1.5e-06, 51.92% id in 104 aa. Note: C-terminal region presents two regions of high hidrophilicity, high content in alanine amino acid residues, high G+C content and no databsse matches | genbank | 52209534 | CAH35487.1 | 231 | 1724107 | 1724802 | |
| 146263 | hypothetical | BPSL1487 | putative MerR-family transcriptional regulator Similar to Clostridium acetobutylicum transcriptional regulator, MerR family cac3507 SWALL:Q97DH0 (EMBL:AE007847) (126 aa) fasta scores: E(): 8.7e-14, 41.96% id in 112 aa, and to Streptomyces coelicolor putative MerR-family transcriptional regulator sco2875 or sce6.12 SWALL:Q9KZS6 (EMBL:AL353832) (135 aa) fasta scores: E(): 2.3e-11, 41.88% id in 117 aa. Note: this CDS is longer in its C-terminal region than most of its database matches | genbank | 52209535 | CAH35488.1 | 164 | 1725071 | 1725565 | |
| 146264 | hypothetical | BPSL1488 | putative decarboxylase Similar to Methanobacterium thermoautotrophicum gamma-carboxymuconolactone decarboxylase mth234 SWALL:O26336 (EMBL:AE000810) (125 aa) fasta scores: E(): 2.8e-20, 49.59% id in 123 aa, and to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 4.1e-09, 35.29% id in 119 aa. Note: N-terminal region overlaps in 17 residues with CDS upstream | genbank | 52209536 | CAH35489.1 | 132 | 1725514 | 1725912 | |
| 146265 | hypothetical | BPSL1489 | putative membrane protein Similar to Vibrio parahaemolyticus multidrug resistance protein NorM SWALL:NORM_VIBPA (SWALL:O82855) (456 aa) fasta scores: E(): 3.3e-43, 33.56% id in 438 aa, and to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1180 or rs04529 SWALL:Q8Y064 (EMBL:AL646063) (448 aa) fasta scores: E(): 5.6e-91, 57.52% id in 445 aa | genbank | 52209537 | CAH35490.1 | 451 | 1726307 | 1727662 | |
| 146266 | hypothetical | BPSL1490 | putative membrane protein Similar to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1181 or rs05713 SWALL:Q8Y063 (EMBL:AL646063) (598 aa) fasta scores: E(): 5e-135, 52.92% id in 582 aa, and to Neisseria meningitidis putative inner membrane protein nma0497 SWALL:Q9JW86 (EMBL:AL162753) (558 aa) fasta scores: E(): 2.1e-23, 26.95% id in 575 aa | genbank | 52209538 | CAH35491.1 | 612 | 1727666 | 1729504 | |
| 146267 | hypothetical | BPSL1491 | 50S ribosomal protein L31 Similar to Escherichia coli, and Escherichia coli O157:H7 50S ribosomal protein L31 type B-1 RpmE2 or b0296 or z0364 or ecs0327 SWALL:R31B_ECOLI (SWALL:P71302) (87 aa) fasta scores: E(): 3.7e-11, 47.61% id in 84 aa, and to Ralstonia solanacearum 50S ribosomal protein L31 type B rsc1182 or rs05714 SWALL:Q8Y062 (EMBL:AL646063) (87 aa) fasta scores: E(): 1.3e-23, 75% id in 88 aa | genbank | 52209539 | CAH35492.1 | 87 | 1729638 | 1729901 | |
| 146268 | hypothetical | BPSL1492 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1184 or rs05716 SWALL:Q8Y060 (EMBL:AL646063) (288 aa) fasta scores: E(): 4.8e-57, 53.52% id in 284 aa, and to Escherichia coli hypothetical protein YeeI or b1976 SWALL:YEEI_ECOLI (SWALL:P76346) (265 aa) fasta scores: E(): 1.5e-16, 33.88% id in 242 aa | genbank | 52209540 | CAH35493.1 | 281 | 1730116 | 1730961 | |
| 146269 | hypothetical | BPSL1493 | putative membrane protein Similar to Ralstonia solanacearum putative multidrug resistance-like transmembrane protein rsc1473 or rs03834 SWALL:Q8XZC8 (EMBL:AL646064) (517 aa) fasta scores: E(): 2.3e-40, 31.05% id in 512 aa, and to Xanthomonas campestris multidrug resistance membrane translocase xcc1400 SWALL:AAM40698 (EMBL:AE012239) (526 aa) fasta scores: E(): 3.5e-24, 24.95% id in 521 aa | genbank | 52209541 | CAH35494.1 | 518 | 1731004 | 1732560 | |
| 146270 | hypothetical | BPSL1494 | putative MerR-family transcriptional regulator Similar to Deinococcus radiodurans transcriptional regulator, MerR family dr2306 SWALL:Q9RS21 (EMBL:AE002062) (155 aa) fasta scores: E(): 7.3e-21, 50% id in 144 aa, and to the N-terminal region of Streptomyces coelicolor putative MerR-family transcriptional regulator sco7698 or sc1a4.06C SWALL:Q9EX58 (EMBL:AL450433) (380 aa) fasta scores: E(): 4.3e-06, 37.33% id in 150 aa | genbank | 52209542 | CAH35495.1 | 166 | 1732557 | 1733057 | |
| 146271 | rho | hypothetical | BPSL1495 | transcription termination factor rho Similar to Escherichia coli, and Escherichia coli O157:H7 transcription termination factor rho SWALL:RHO_ECOLI (SWALL:P03002) (419 aa) fasta scores: E(): 7.9e-108, 69.37% id in 418 aa, and to Ralstonia solanacearum probable transcription termination factor rho rsc1187 or rs05719 SWALL:Q8Y057 (EMBL:AL646063) (420 aa) fasta scores: E(): 2.7e-136, 88.3% id in 419 aa | genbank | 52209543 | CAH35496.1 | 420 | 1733194 | 1734456 |
| 146272 | hypothetical | BPSL1496 | hypothetical protein No significant database matches | genbank | 52209544 | CAH35497.1 | 41 | 1734520 | 1734645 | |
| 146273 | trxA | hypothetical | BPSL1497 | thioredoxin 1 Similar to Escherichia coli, Salmonella typhimurium, and Salmonella typhi thioredoxin 1 TrxA or TsnC or FipA or b3781 or stm3915 or sty3639 SWALL:THIO_ECOLI (SWALL:P00274) (108 aa) fasta scores: E(): 1.2e-26, 64.48% id in 107 aa, and to Ralstonia solanacearum probable thioredoxin 1 rsc1188 or rs05720 SWALL:Q8Y056 (EMBL:AL646063) (108 aa) fasta scores: E(): 3.2e-37, 88.88% id in 108 aa | genbank | 52209545 | CAH35498.1 | 108 | 1734652 | 1734978 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146274 | dnaX | hypothetical | BPSL1498 | DNA polymerase III subunit gamma Similar to the N-terminal region of Escherichia coli DNA polymerase III subunit tau DnaX or DnaZ or DnaZX or b0470 SWALL:DP3X_ECOLI (SWALL:P06710) (643 aa) fasta scores: E(): 1.4e-51, 46.7% id in 531 aa, and to the N-terminal region of Ralstonia solanacearum probable DNA polymerase III rsc1191 or rs05723 SWALL:Q8Y053 (EMBL:AL646063) (728 aa) fasta scores: E(): 9e-82, 54.42% id in 836 aa, and to the full length of Buchnera aphidicola DNA polymerase III subunit gamma DnaX or bu481 SWALL:DP3X_BUCAI (SWALL:P57553) (361 aa) fasta scores: E(): 4.4e-34, 42.22% id in 360 aa. Note: Database matches to full length DNA polymeases III in this CDS are only to the N-terminal region, this suggests that this CDS has similarity to the gamma subunit region | genbank | 52209546 | CAH35499.1 | 825 | 1735645 | 1738122 |
| 146275 | hypothetical | BPSL1499 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1192 or rs05724 SWALL:YB92_RALSO (SWALL:Q8Y052) (115 aa) fasta scores: E(): 5.6e-29, 79.13% id in 115 aa, and to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi hypothetical protein YbaB or b0471 or z0588 or ecs0524 or stm0485 or sty0529 SWALL:YBAB_ECOLI (SWALL:P17577) (109 aa) fasta scores: E(): 9.6e-24, 67.92% id in 106 aa | genbank | 52209547 | CAH35500.1 | 108 | 1738219 | 1738545 | |
| 146276 | recR | hypothetical | BPSL1500 | recombination protein Similar to Escherichia coli, and Escherichia coli O157:H7 recombination protein RecR or b0472 or z0589 or ecs0525 SWALL:RECR_ECOLI (SWALL:P12727) (201 aa) fasta scores: E(): 1.8e-36, 51.81% id in 193 aa, and to Ralstonia solanacearum recombination protein rsc1194 or rs05726 SWALL:RECR_RALSO (SWALL:Q8Y050) (207 aa) fasta scores: E(): 9.7e-58, 71.84% id in 206 aa | genbank | 52209548 | CAH35501.1 | 202 | 1738571 | 1739179 |
| 146277 | hypothetical | BPSL1501 | putative transferase Similar to Pseudomonas aeruginosa hypothetical protein pa3733 SWALL:Q9HXQ9 (EMBL:AE004792) (409 aa) fasta scores: E(): 4.9e-99, 65.92% id in 402 aa, to Caulobacter crescentus hypothetical protein cc3562 SWALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 6.6e-76, 52.67% id in 393 aa, and to Escherichia coli crotonobetainyl-CoA:carnitine CoA-transferase CaiB or b0038 SWALL:CAIB_ECOLI (SWALL:P31572) (405 aa) fasta scores: E(): 9.8e-28, 29.52% id in 403 aa | genbank | 52209549 | CAH35502.1 | 401 | 1739249 | 1740454 | |
| 146278 | surE | hypothetical | BPSL1502 | acid phosphatase Similar to Escherichia coli, and Escherichia coli O157:H7 acid phosphatase SurE or b2744 or z4052 or ecs3598 SWALL:SURE_ECOLI (SWALL:P36664) (253 aa) fasta scores: E(): 6.9e-41, 50.81% id in 246 aa, and to Ralstonia solanacearum acid phosphatase rsc1204 or rs02681 SWALL:SURE_RALSO (SWALL:Q8Y040) (251 aa) fasta scores: E(): 7.8e-67, 70.96% id in 248 aa | genbank | 52209550 | CAH35503.1 | 253 | 1740559 | 1741320 |
| 146279 | hypothetical | BPSL1503 | putative L-isoaspartate O-methyltransferase Similar to full length of Ralstonia solanacearum hypothetical protein rsc1205 or rs02685 SWALL:Q8Y039 (EMBL:AL646063) (321 aa) fasta scores: E(): 3.5e-30, 54.03% id in 335 aa, and C-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 protein-L-isoaspartate O-methyltransferase Pcm or b2743 or z4051 or ecs3597 SWALL:PIMT_ECOLI (SWALL:P24206) (207 aa) fasta scores: E(): 4.3e-21, 45.19% id in 208 aa | genbank | 52209551 | CAH35504.1 | 322 | 1741317 | 1742285 | |
| 146280 | hypothetical | BPSL1504 | subfamily M23B unassigned peptidase Similar to full length of Rhodocyclus gelatinosus NlpD protein SWALL:Q9JP90 (EMBL:AB034704) (314 aa) fasta scores: E(): 5.3e-38, 51.91% id in 314 aa, and to C-terminal region of Escherichia coli lipoprotein NlpD precursor or b2742 SWALL:NLPD_ECOLI (SWALL:P33648) (379 aa) fasta scores: E(): 1.3e-18, 42.57% id in 256 aa | genbank | 52209552 | CAH35505.1 | 298 | 1742291 | 1743187 | |
| 146281 | rpoS | hypothetical | BPSL1505 | RNA polymerase sigma factor Similar to Pseudomonas aeruginosa RNA polymerase sigma factor RpoS or pa3622 SWALL:RPOS_PSEAE (SWALL:P45684) (334 aa) fasta scores: E(): 1.3e-46, 50% id in 326 aa, and to Burkholderia cepacia RNA polymerase sigma factor RpoS SWALL:Q8RKM7 (EMBL:AJ457984) (362 aa) fasta scores: E(): 1.5e-118, 93.37% id in 362 aa | genbank | 52209553 | CAH35506.1 | 359 | 1743199 | 1744278 |
| 146282 | hypothetical | BPSL1506 | conserved hypothetical protein Similar to Neisseria meningitidis hypothetical protein nma1628 SWALL:Q9JTU6 (EMBL:AL162756) (264 aa) fasta scores: E(): 6.1e-65, 61.21% id in 263 aa, and to Campylobacter jejuni hypothetical protein cj1132C SWALL:Q9PNG2 (EMBL:AL139077) (264 aa) fasta scores: E(): 1.3e-26, 35.56% id in 239 aa | genbank | 52209554 | CAH35507.1 | 258 | 1744286 | 1745062 | |
| 146283 | hypothetical | BPSL1507 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1208 or rs02691 SWALL:Q8Y036 (EMBL:AL646063) (289 aa) fasta scores: E(): 2.4e-46, 50% id in 290 aa, and to Rhizobium loti hypothetical protein mll3063 SWALL:Q98H23 (EMBL:AP003001) (302 aa) fasta scores: E(): 2e-11, 30% id in 300 aa | genbank | 52209555 | CAH35508.1 | 286 | 1745236 | 1746096 | |
| 146284 | hypothetical | BPSL1508 | putative 23S rRNA (uracil-5-)-methyltransferase Similar to Escherichia coli 23S rRNA (uracil-5-)-methyltransferase RumA or b2785 SWALL:RUMA_ECOLI (SWALL:P55135) (432 aa) fasta scores: E(): 5.8e-33, 37.24% id in 443 aa, and to Ralstonia solanacearum 23S rRNA (uracil-5-)-methyltransferase RumA or rsc1209 or rs02696 SWALL:RUMA_RALSO (SWALL:Q8Y035) (450 aa) fasta scores: E(): 1.4e-138, 77.5% id in 449 aa | genbank | 52209556 | CAH35509.1 | 465 | 1746174 | 1747571 | |
| 146285 | hypothetical | BPSL1509 | putative membrane protein Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1210 or rs02699 SWALL:Q8Y034 (EMBL:AL646063) (233 aa) fasta scores: E(): 1.1e-60, 74% id in 227 aa, and to Escherichia coli hypothetical protein YccA or b0970 SWALL:YCCA_ECOLI (SWALL:P06967) (219 aa) fasta scores: E(): 9.2e-22, 37.68% id in 207 aa | genbank | 52209557 | CAH35510.1 | 237 | 1747645 | 1748358 | |
| 146286 | ndk | hypothetical | BPSL1510 | nucleoside diphosphate kinase Similar to Escherichia coli, and Escherichia coli O157:H7 nucleoside diphosphate kinase Ndk or b2518 or z3781 or ecs3380 SWALL:NDK_ECOLI (SWALL:P24233) (142 aa) fasta scores: E(): 3.4e-28, 57.14% id in 140 aa, and to Ralstonia solanacearum nucleoside diphosphate kinase rsc1211 or rs02703 SWALL:NDK_RALSO (SWALL:Q8Y033) (141 aa) fasta scores: E(): 1.9e-45, 86.52% id in 141 aa | genbank | 52209558 | CAH35511.1 | 141 | 1748592 | 1749017 |
| 146287 | hypothetical | BPSL1511 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1212 or rs02704 SWALL:Q8Y032 (EMBL:AL646063) (383 aa) fasta scores: E(): 2.6e-120, 80.96% id in 373 aa, and to Escherichia coli hypothetical protein YfgB or b2517 SWALL:YFGB_ECOLI (SWALL:P36979) (384 aa) fasta scores: E(): 1e-73, 53.33% id in 375 aa | genbank | 52209559 | CAH35512.1 | 378 | 1749059 | 1750195 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146288 | hypothetical | BPSL1512 | conserved hypothetical protein Similar to Ralstonia solanacearum probable transmembrane protein rsc1214 or rs02709 SWALL:Q8Y030 (EMBL:AL646063) (367 aa) fasta scores: E(): 5.1e-17, 34.87% id in 367 aa, and to Escherichia coli hypothetical protein YfgA or b2516 SWALL:YFGA_ECOLI (SWALL:P27434) (337 aa) fasta scores: E(): 3.3e-06, 27.85% id in 341 aa | genbank | 52209560 | CAH35513.1 | 362 | 1750337 | 1751425 | |
| 146289 | hypothetical | BPSL1513 | putative 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase Similar to Escherichia coli, and Escherichia coli O157:H7 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase IspG or GcpE or b2515 or z3778 or ecs3377 SWALL:ISPG_ECOLI (SWALL:P27433) (372 aa) fasta scores: E(): 2.1e-09, 34.25% id in 397 aa, and to Ralstonia solanacearum 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase or rsc1215 or rs02710 SWALL:ISPG_RALSO (SWALL:P58669) (431 aa) fasta scores: E(): 7.6e-128, 79.56% id in 416 aa | genbank | 52209561 | CAH35514.1 | 416 | 1751569 | 1752819 | |
| 146290 | hisS | hypothetical | BPSL1514 | histidyl-tRNA synthetase Similar to Escherichia coli, and Escherichia coli O157:H7 histidyl-tRNA synthetase HisS or b2514 or z3777 or ecs3376 SWALL:SYH_ECOLI (SWALL:P04804) (423 aa) fasta scores: E(): 1.2e-82, 54.52% id in 420 aa, and to Ralstonia solanacearum probable histidine-tRNA synthetase protein HisS or rsc1216 or rs02790 SWALL:Q8Y029 (EMBL:AL646063) (432 aa) fasta scores: E(): 1e-130, 75.4% id in 435 aa | genbank | 52209562 | CAH35515.1 | 446 | 1752838 | 1754178 |
| 146291 | hypothetical | BPSL1515 | putative membrane protein Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1217 or rs02712 SWALL:Q8Y028 (EMBL:AL646063) (211 aa) fasta scores: E(): 2e-49, 67.61% id in 210 aa, and to Neisseria gonorrhoeae hypothetical 23.1 kDa protein in engA 5'region SWALL:YENG_NEIGO (SWALL:O87406) (209 aa) fasta scores: E(): 2.4e-13, 31.92% id in 213 aa | genbank | 52209563 | CAH35516.1 | 209 | 1754231 | 1754860 | |
| 146292 | hypothetical | BPSL1516 | conserved hypothetical protein Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1218 or rs02713 SWALL:Q8Y027 (EMBL:AL646063) (388 aa) fasta scores: E(): 1.5e-67, 48.78% id in 369 aa, and to Escherichia coli hypothetical protein YfgL or b2512 SWALL:YFGL_ECOLI (SWALL:P77774) (392 aa) fasta scores: E(): 7.5e-25, 31.41% id in 382 aa | genbank | 52209564 | CAH35517.1 | 381 | 1754905 | 1756050 | |
| 146293 | hypothetical | BPSL1517 | putative GTPase Similar to Neisseria gonorrhoeae probable GTP-binding protein EngA SWALL:ENGA_NEIGO (SWALL:O87407) (485 aa) fasta scores: E(): 6.7e-100, 64.94% id in 445 aa, and to Ralstonia solanacearum hypothetical protein rsc1219 or rs02721 SWALL:Q8Y026 (EMBL:AL646063) (447 aa) fasta scores: E(): 8.1e-123, 79.14% id in 446 aa | genbank | 52209565 | CAH35518.1 | 445 | 1756326 | 1757663 | |
| 146294 | hfq | hypothetical | BPSL1518 | Hfq protein Similar to Escherichia coli, and Escherichia coli O157:H7 Hfq protein or b4172 or z5779 or ecs5148 SWALL:HFQ_ECOLI (SWALL:P25521) (101 aa) fasta scores: E(): 4.8e-22, 81.69% id in 71 aa, and to Ralstonia solanacearum Hfq protein rsc1220 or rs02722 SWALL:HFQ_RALSO (SWALL:Q8Y025) (79 aa) fasta scores: E(): 1.2e-26, 95.94% id in 74 aa | genbank | 52209566 | CAH35519.1 | 79 | 1757798 | 1758037 |
| 146295 | hflX | hypothetical | BPSL1519 | putative GTP-binding protein Similar to Escherichia coli GTP-binding protein HflX or b4173 SWALL:HFLX_ECOLI (SWALL:P25519) (426 aa) fasta scores: E(): 1.1e-64, 56.06% id in 371 aa, and to Ralstonia solanacearum hypothetical protein rsc1221 or rs02723 SWALL:Q8Y024 (EMBL:AL646063) (417 aa) fasta scores: E(): 9.4e-83, 67.97% id in 356 aa, and to | genbank | 52209567 | CAH35520.1 | 392 | 1758094 | 1759272 |
| 146296 | hypothetical | BPSL1520 | putative membrane protein Similar to Escherichia coli, and Escherichia coli O157:H7 HflK protein or HflA or b4174 or z5781 or ecs5150 SWALL:HFLK_ECOLI (SWALL:P25662) (419 aa) fasta scores: E(): 9.1e-23, 32.07% id in 424 aa, and to Ralstonia solanacearum hypothetical transmembrane protein rsc1222 or rs02724 SWALL:Q8Y023 (EMBL:AL646063) (447 aa) fasta scores: E(): 2.6e-49, 49.55% id in 450 aa | genbank | 52209568 | CAH35521.1 | 449 | 1759318 | 1760667 | |
| 146297 | hypothetical | BPSL1521 | putative membrane protein Similar to Escherichia coli, and Escherichia coli O157:H7 HflC protein or HflA or b4175 or z5782 or ecs5151 SWALL:HFLC_ECOLI (SWALL:P25661) (334 aa) fasta scores: E(): 3.3e-16, 35.45% id in 330 aa, and to Ralstonia solanacearum putative serine protease transmembrane protein rsc1223 or rs02730 SWALL:Q8Y022 (EMBL:AL646063) (304 aa) fasta scores: E(): 5.7e-38, 44.07% id in 304 aa | genbank | 52209569 | CAH35522.1 | 299 | 1760684 | 1761583 | |
| 146298 | hypothetical | BPSL1522 | putative membrane protein Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1224 or rs02731 SWALL:Q8Y021 (EMBL:AL646063) (66 aa) fasta scores: E(): 4.7e-06, 44.64% id in 56 aa, and to Yersinia pestis putative membrane protein ypo0377 SWALL:Q8ZIV8 (EMBL:AJ414142) (66 aa) fasta scores: E(): 0.003, 33.33% id in 60 aa | genbank | 52209570 | CAH35523.1 | 63 | 1761608 | 1761799 | |
| 146299 | hypothetical | BPSL1523 | putative ATP phosphoribosyltransferase Similar to Ralstonia solanacearum hypothetical protein rsc1225 or rs02732 SWALL:Q8Y020 (EMBL:AL646063) (386 aa) fasta scores: E(): 8.6e-95, 69.37% id in 382 aa, and to Pseudomonas aeruginosa ATP phosphoribosyltransferase regulatory subunit pa4939 SWALL:HISZ_PSEAE (SWALL:Q9HUM5) (394 aa) fasta scores: E(): 2.7e-56, 46.39% id in 388 aa | genbank | 52209571 | CAH35524.1 | 382 | 1761911 | 1763059 | |
| 146300 | purA | hypothetical | BPSL1524 | adenylosuccinate synthetase Similar to Escherichia coli, and Escherichia coli O157:H7 adenylosuccinate synthetase PurA or AdeK or b4177 or z5784 or ecs5153 SWALL:PURA_ECOLI (SWALL:P12283) (431 aa) fasta scores: E(): 9.7e-103, 60.87% id in 437 aa, and to Ralstonia solanacearum probable adenylosuccinate synthetase protein rsc1226 or rs02733 SWALL:Q8Y019 (EMBL:AL646063) (446 aa) fasta scores: E(): 9.4e-147, 81.65% id in 447 aa | genbank | 52209572 | CAH35525.1 | 448 | 1763184 | 1764530 |
| 146301 | hypothetical | BPSL1525 | putative nucleotide phosphoribosyltransferase Similar to Ralstonia solanacearum putative nucleotide phosphoribosyltransferase protein rsc1227 or rs02734 SWALL:Q8Y018 (EMBL:AL646063) (193 aa) fasta scores: E(): 4.9e-62, 82.77% id in 180 aa, and to Haemophilus influenzae xanthine-guanine phosphoribosyltransferase (GptA or XgpRT-A or hi0674) and (gptb or xgprt-b or hi0692) SWALL:XGPT_HAEIN (SWALL:P43859) (155 aa) fasta scores: E(): 0.0031, 31.41% id in 156 aa | genbank | 52209573 | CAH35526.1 | 187 | 1764567 | 1765130 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146302 | kup | hypothetical | BPSL1526 | kup system potassium uptake protein Similar to Escherichia coli kup system potassium uptake protein Kup or TrkD or b3747 SWALL:KUP_ECOLI (SWALL:P30016) (622 aa) fasta scores: E(): 4.9e-119, 49.67% id in 624 aa, and to Ralstonia solanacearum probable potassium uptake transmembrane protein rsc1621 or rs03984 SWALL:Q8XYY5 (EMBL:AL646065) (633 aa) fasta scores: E(): 1.8e-167, 68.26% id in 624 aa | genbank | 52209574 | CAH35527.1 | 630 | 1765422 | 1767314 |
| 146303 | tex | hypothetical | BPSL1527 | putative transcription accessory protein Similar to Bordetella pertussis Tex protein SWALL:TEX_BORPE (SWALL:Q45388) (791 aa) fasta scores: E(): 1.2e-179, 64.38% id in 775 aa, and to Ralstonia solanacearum putative transcription accessory protein rsc1623 or rs03986 SWALL:Q8XYY3 (EMBL:AL646065) (779 aa) fasta scores: E(): 0, 78.16% id in 783 aa | genbank | 52209575 | CAH35528.1 | 774 | 1767550 | 1769874 |
| 146304 | hypothetical | BPSL1528 | putative exported protein Similar to Ralstonia solanacearum hypothetical protein RSC1624or RS03987 SWALL:Q8XYY2 (EMBL:AL646065) (253 aa) fasta scores: E(): 9.7e-23, 43.29% id in 231 aa | genbank | 52209576 | CAH35529.1 | 249 | 1770014 | 1770763 | |
| 146305 | hypothetical | BPSL1529 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1625 or rs03988 SWALL:Q8XYY1 (EMBL:AL646065) (67 aa) fasta scores: E(): 0.0064, 46.29% id in 54 aa, and to Xanthomonas axonopodis hypothetical protein xac4268 SWALL:AAM39103 (EMBL:AE012079) (72 aa) fasta scores: E(): 0.026, 36.98% id in 73 aa | genbank | 52209577 | CAH35530.1 | 71 | 1770872 | 1771087 | |
| 146306 | hypothetical | BPSL1530 | putative ATP-dependent DNA helicase-related protein Similar to Ralstonia solanacearum probable ATP-dependent DNA helicase-related protein rsc1626 or rs03989 SWALL:Q8XYY0 (EMBL:AL646065) (713 aa) fasta scores: E(): 1.2e-174, 71.71% id in 640 aa, and to Escherichia coli probable ATP-dependent helicase YoaA or b1808 SWALL:YOAA_ECOLI (SWALL:P76257) (636 aa) fasta scores: E(): 1.4e-41, 45.26% id in 623 aa | genbank | 52209578 | CAH35531.1 | 686 | 1771348 | 1773408 | |
| 146307 | hypothetical | BPSL1531 | putative lipoprotein Similar to Neisseria meningitidis competence lipoprotein coml precursor ComL or nma0907 SWALL:COML_NEIMA (SWALL:Q9JVB7) (267 aa) fasta scores: E(): 5e-41, 44.35% id in 257 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical lipoprotein precursor YfiO or b2595 or z3889 or ecs3458 SWALL:YFIO_ECOLI (SWALL:P77146) (245 aa) fasta scores: E(): 1.7e-27, 36.13% id in 238 aa | genbank | 52209579 | CAH35532.1 | 274 | 1773584 | 1774408 | |
| 146308 | hypothetical | BPSL1532 | putative ribosomal large subunit pseudouridine synthase D Similar to Escherichia coli ribosomal large subunit pseudouridine synthase D RluD SWALL:RLUD_ECOLI (SWALL:P33643) (325 aa) fasta scores: E(): 1.1e-46, 48.57% id in 315 aa, and to Ralstonia solanacearum ribosomal large subunit pseudouridine synthase D RluD SWALL:RLUD_RALSO (SWALL:Q8XYX8) (358 aa) fasta scores: E(): 1.7e-76, 63.2% id in 356 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site after codon 60 | genbank | 52209580 | CAH35533.1 | 395 | 1774462 | 1775649 | |
| 146309 | hypothetical | BPSL1533 | conserved hypothetical protein Similar to Escherichia coli hypothetical protein YfiH or b2593 SWALL:YFIH_ECOLI (SWALL:P33644) (243 aa) fasta scores: E(): 9.1e-23, 50.74% id in 270 aa, and to Ralstonia solanacearum hypothetical protein rsc1629 or rs03992 SWALL:Q8XYX7 (EMBL:AL646065) (267 aa) fasta scores: E(): 5.1e-43, 59.55% id in 272 aa | genbank | 52209581 | CAH35534.1 | 276 | 1775662 | 1776492 | |
| 146310 | phbC | hypothetical | BPSL1534 | poly-beta-hydroxybutyrate polymerase Similar to Alcaligenes eutrophus poly-beta-hydroxybutyrate polymerase PhbC SWALL:PHBC_ALCEU (SWALL:P23608) (589 aa) fasta scores: E(): 7.2e-130, 61.63% id in 589 aa, and to Burkholderia sp. DSMZ 9242 PhaC SWALL:Q9RB82 (EMBL:AF153086) (625 aa) fasta scores: E(): 1.4e-188, 82.89% id in 602 aa | genbank | 52209582 | CAH35535.1 | 601 | 1777009 | 1778814 |
| 146311 | phbA | hypothetical | BPSL1535 | acetyl-CoA acetyltransferase Similar to Alcaligenes eutrophus acetyl-CoA acetyltransferase PhbA SWALL:THIL_ALCEU (SWALL:P14611) (393 aa) fasta scores: E(): 4.9e-117, 85.96% id in 392 aa, and to Burkholderia sp. DSMZ 9242 PhaA SWALL:Q9RB81 (EMBL:AF153086) (393 aa) fasta scores: E(): 9.4e-127, 92.36% id in 393 aa. Note: Also similar to BPSL1540 (418 aa) fasta scores: E(): 6e-62, 52.806% identity in 392 aa overlap and to BPSL0371 (398 aa) fasta scores: E(): 7.2e-59, 50.643% identity in 389 aa overlap | genbank | 52209583 | CAH35536.1 | 393 | 1778911 | 1780092 |
| 146312 | phbB | hypothetical | BPSL1536 | acetoacetyl-CoA reductase Similar to Alcaligenes eutrophus acetoacetyl-CoA reductase PhbB SWALL:PHBB_ALCEU (SWALL:P14697) (246 aa) fasta scores: E(): 4.7e-82, 89.02% id in 246 aa, and to Burkholderia sp. DSMZ 9242 PhaB SWALL:Q9RB80 (EMBL:AF153086) (246 aa) fasta scores: E(): 3.6e-86, 94.71% id in 246 aa. Note: Also similar to BPSS1916 (second chromosome) (268 aa) fasta scores: E(): 9.5e-50, 53.077% identity in 260 aa overlap | genbank | 52209584 | CAH35537.1 | 246 | 1780218 | 1780958 |
| 146313 | hypothetical | BPSL1537 | conserved hypothetical protein Similar to Burkholderia sp. DSMZ 9242 hypothetical 21.8 kDa protein SWALL:Q9RB79 (EMBL:AF153086) (188 aa) fasta scores: E(): 1e-61, 92.1% id in 190 aa, and to Thiocystis violacea hypothetical protein in phbA 5'region SWALL:YPH4_THIVI (SWALL:P45368) (138 aa) fasta scores: E(): 1.1e-19, 54.54% id in 132 aa | genbank | 52209585 | CAH35538.1 | 190 | 1781095 | 1781667 | |
| 146314 | hypothetical | BPSL1538 | conserved hypothetical protein Similar to, although shorter than, Pseudomonas putida putative fructokinase-like protein Flp SWALL:BAB96555 (EMBL:AB085816) (536 aa) fasta scores: E(): 2.5e-159, 90.46% id in 451 aa, and to Pasteurella multocida hypothetical protein pm1571 SWALL:YF71_PASMU (SWALL:Q9CKN9) (446 aa) fasta scores: E(): 8.5e-106, 60.97% id in 451 aa | genbank | 52209586 | CAH35539.1 | 459 | 1782265 | 1783644 | |
| 146315 | hypothetical | BPSL1539 | putative fructokinase-like protein Similar to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 4.2e-19, 31.49% id in 308 aa, and to Pseudomonas putida putative fructokinase-like protein ORF5 SWALL:BAB96556 (EMBL:AB085816) (307 aa) fasta scores: E(): 5.3e-90, 78.07% id in 301 aa | genbank | 52209587 | CAH35540.1 | 308 | 1783647 | 1784573 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146316 | hypothetical | BPSL1540 | putative beta-ketothiolase Similar to Alcaligenes eutrophus beta-ketothiolase BktB SWALL:O68275 (EMBL:AF026544) (394 aa) fasta scores: E(): 3.2e-114, 79.44% id in 394 aa, and to Alcaligenes eutrophus acetyl-CoA acetyltransferase PhbA SWALL:THIL_ALCEU (SWALL:P14611) (393 aa) fasta scores: E(): 6.3e-67, 52.04% id in 392 aa. Note: Also similar to BPSL1535 (394 aa) fasta scores: E(): 1.8e-61, 52.806% identity in 392 aa overlap | genbank | 52209588 | CAH35541.1 | 394 | 1784669 | 1785853 | |
| 146317 | hypothetical | BPSL1541 | putative exported protein Very low similarity to Ralstonia solanacearum putative signal peptide protein rsc1638 or rs04012 SWALL:Q8XYW8 (EMBL:AL646065) (245 aa) fasta scores: E(): 8.1e-06, 35.18% id in 162 aa | genbank | 52209589 | CAH35542.1 | 193 | 1785870 | 1786451 | |
| 146318 | hypothetical | BPSL1542 | putative cystathionine beta-lyase Similar to Escherichia coli cystathionine beta-lyase MetC or b3008 SWALL:METC_ECOLI (SWALL:P06721) (395 aa) fasta scores: E(): 5.8e-47, 37.84% id in 362 aa, and to Ralstonia solanacearum putative cystathionine beta-lyase rsc1639 or rs04013 SWALL:Q8XYW7 (EMBL:AL646065) (404 aa) fasta scores: E(): 3.2e-94, 64.43% id in 388 aa | genbank | 52209590 | CAH35543.1 | 394 | 1786752 | 1787936 | |
| 146319 | hypothetical | BPSL1543 | putative phosphoserine phosphatase Similar to Escherichia coli, and Escherichia coli O157:H7 phosphoserine phosphatase SerB or b4388 or z5989 or ecs5346 SWALL:SERB_ECOLI (SWALL:P06862) (322 aa) fasta scores: E(): 1.6e-26, 41.72% id in 266 aa, and to Neisseria meningitidis putative phosphoserine phosphatase nma1179 SWALL:Q9JUR1 (EMBL:AL162755) (277 aa) fasta scores: E(): 2.1e-35, 47.6% id in 250 aa | genbank | 52209591 | CAH35544.1 | 281 | 1788200 | 1789045 | |
| 146320 | hypothetical | BPSL1544 | putative exported protein No significant database matches | genbank | 52209592 | CAH35545.1 | 181 | 1789902 | 1790447 | |
| 146321 | hypothetical | BPSL1545 | putative ABC transport system, membrane protein Similar to Escherichia coli hypothetical protein YbbM or b0491 SWALL:YBBM_ECOLI (SWALL:P77307) (259 aa) fasta scores: E(): 1.3e-20, 28.3% id in 265 aa, and to Ralstonia solanacearum probable transmembrane protein rsc0748 or rs05105 SWALL:Q8Y1E2 (EMBL:AL646060) (272 aa) fasta scores: E(): 2.6e-63, 68.32% id in 262 aa | genbank | 52209593 | CAH35546.1 | 272 | 1791212 | 1792030 | |
| 146322 | hypothetical | BPSL1546 | putative ABC transport system, ATP-binding protein Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0749 or rs05104 SWALL:Q8Y1E1 (EMBL:AL646060) (230 aa) fasta scores: E(): 4.1e-34, 54.5% id in 222 aa, and to Salmonella typhi putative ABC transporter ATP-binding protein sty0548 SWALL:Q8Z8S1 (EMBL:AL627267) (225 aa) fasta scores: E(): 2.5e-11, 33.04% id in 227 aa | genbank | 52209594 | CAH35547.1 | 231 | 1792027 | 1792722 | |
| 146323 | hypothetical | BPSL1547 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc0773 or rs05081 SWALL:Q8Y1B7 (EMBL:AL646061) (740 aa) fasta scores: E(): 3e-79, 44.84% id in 814 aa, and to Yersinia pestis putative exported protein ypo3987 SWALL:Q8ZA33 (EMBL:AJ414160) (740 aa) fasta scores: E(): 2.1e-69, 39.63% id in 820 aa. Note: It contains a region from approx. residue 200 to approx. residue 350 with very little or no similarities to database entries | genbank | 52209595 | CAH35548.1 | 824 | 1792856 | 1795330 | |
| 146324 | hypothetical | BPSL1548 | putative ABC transport system, ATP-binding protein Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter ATP-binding protein YbiT or b0820 or z1042 or ecs0897 SWALL:YBIT_ECOLI (SWALL:P75790) (530 aa) fasta scores: E(): 4.7e-115, 66.66% id in 531 aa, and to Salmonella typhi ABC transporter ATP-binding protein sty0879 SWALL:Q8Z870 (EMBL:AL627268) (531 aa) fasta scores: E(): 3.7e-115, 67.04% id in 531 aa | genbank | 52209596 | CAH35549.1 | 530 | 1795789 | 1797381 | |
| 146325 | hypothetical | BPSL1549 | hypothetical protein No significant database matches | genbank | 52209597 | CAH35550.1 | 211 | 1797528 | 1798163 | |
| 146326 | hypothetical | BPSL1550 | putative betaine aldehyde dehydrogenase Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 1.9e-59, 40.33% id in 476 aa, and to Ralstonia solanacearum putative betaine aldehyde dehydrogenase rsc1456 or rs03851 SWALL:Q8XZE5 (EMBL:AL646064) (478 aa) fasta scores: E(): 1.1e-127, 71.3% id in 474 aa | genbank | 52209598 | CAH35551.1 | 478 | 1798479 | 1799915 | |
| 146327 | hypothetical | BPSL1551 | putative 2-nitropropane dioxygenase Similar to Ralstonia solanacearum hypothetical protein rsc0114 or rs00984 SWALL:Q8Y367 (EMBL:AL646057) (402 aa) fasta scores: E(): 8.7e-90, 63.54% id in 384 aa, and to Fusobacterium nucleatum 2-nitropropane dioxygenase fn0664 SWALL:Q8RFM8 (EMBL:AE010577) (382 aa) fasta scores: E(): 3e-31, 37.22% id in 368 aa | genbank | 52209599 | CAH35552.1 | 396 | 1800114 | 1801304 | |
| 146328 | hypothetical | BPSL1552 | putative outer membrane protein Similar to Escherichia coli outer membrane protein W precursor OmpW or b1256 SWALL:OMPW_ECOLI (SWALL:P21364) (212 aa) fasta scores: E(): 7.9e-17, 38.27% id in 209 aa, to Vibrio cholerae outer membrane protein W precursor OmpW or vca0867 SWALL:OMPW_VIBCH (SWALL:P17266) (217 aa) fasta scores: E(): 2.7e-13, 32.55% id in 215 aa, and to Rhizobium sp. hypothetical outer-membrane protein Y4mB precursor SWALL:Y4MB_RHISN (SWALL:P55561) (229 aa) fasta scores: E(): 9.8e-22, 38.09% id in 231 aa | genbank | 52209600 | CAH35553.1 | 214 | 1801377 | 1802021 | |
| 146329 | hypothetical | BPSL1553 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc1457 or rs03850 SWALL:Q8XZE4 (EMBL:AL646064) (91 aa) fasta scores: E(): 3.6e-18, 67.18% id in 64 aa, and to Pseudomonas aeruginosa hypothetical protein pa1788 SWALL:Q9I2V4 (EMBL:AE004604) (155 aa) fasta scores: E(): 3.7e-06, 50% id in 44 aa | genbank | 52209601 | CAH35554.1 | 67 | 1802147 | 1802350 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146330 | hypothetical | BPSL1554 | putative metal-ion transport system, membrane protein Similar to Escherichia coli, and Escherichia coli O157:H7 manganese transport protein MntH or b2392 or z3658 or ecs3271 SWALL:MNTH_ECOLI (SWALL:P77145) (412 aa) fasta scores: E(): 1.6e-41, 37.82% id in 423 aa, and to Pseudomonas aeruginosa manganese transport protein pa0809 SWALL:MNT2_PSEAE (SWALL:Q9RPF2) (438 aa) fasta scores: E(): 6.3e-73, 51.28% id in 427 aa | genbank | 52209602 | CAH35555.1 | 435 | 1802768 | 1804075 | |
| 146331 | potF | hypothetical | BPSL1555 | putrescine-binding periplasmic protein precursor Similar to Escherichia coli putrescine-binding periplasmic protein precursor PotF or b0854 SWALL:POTF_ECOLI (SWALL:P31133) (370 aa) fasta scores: E(): 8.8e-71, 51.93% id in 362 aa, and to Xanthomonas campestris periplasmic putrescine-binding protein, permease protein xcc2344 SWALL:AAM41622 (EMBL:AE012342) (371 aa) fasta scores: E(): 3e-73, 51.66% id in 360 aa | genbank | 52209603 | CAH35556.1 | 364 | 1804461 | 1805555 |
| 146332 | potG | hypothetical | BPSL1556 | putrescine transport ATP-binding protein Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 5.1e-70, 55.4% id in 370 aa, and to Neisseria meningitidis spermidine/putrescine ABC transporter, ATP-binding protein nmb0610 SWALL:Q9K0I9 (EMBL:AE002416) (419 aa) fasta scores: E(): 1e-73, 57.02% id in 356 aa | genbank | 52209604 | CAH35557.1 | 378 | 1805670 | 1806806 |
| 146333 | potH | hypothetical | BPSL1557 | putrescine transport system permease protein Similar to Escherichia coli putrescine transport system permease protein PotH or b0856 SWALL:POTH_ECOLI (SWALL:P31135) (317 aa) fasta scores: E(): 3.3e-68, 59.85% id in 284 aa, and to Xanthomonas axonopodis polyamine transport protein xac2471 SWALL:AAM37322 (EMBL:AE011884) (288 aa) fasta scores: E(): 2e-69, 62.1% id in 285 aa | genbank | 52209605 | CAH35558.1 | 309 | 1806803 | 1807732 |
| 146334 | potI | hypothetical | BPSL1558 | putrescine transport system permease protein Similar to Escherichia coli putrescine transport system permease protein PotI or b0857 SWALL:POTI_ECOLI (SWALL:P31136) (281 aa) fasta scores: E(): 6.8e-60, 59% id in 261 aa, and to Yersinia pestis putrescine transport system permease protein ypo1334 SWALL:Q8ZGG3 (EMBL:AJ414147) (281 aa) fasta scores: E(): 3.5e-59, 56.7% id in 261 aa | genbank | 52209606 | CAH35559.1 | 272 | 1807729 | 1808547 |
| 146335 | hypothetical | BPSL1559 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc1541 or rs03761 SWALL:Q8XZ63 (EMBL:AL646065) (273 aa) fasta scores: E(): 2.3e-36, 49.62% id in 266 aa, and to Synechocystis sp. hypothetical protein slr1262 SWALL:P73802 (EMBL:D90909) (288 aa) fasta scores: E(): 6.1e-17, 32.45% id in 265 aa | genbank | 52209607 | CAH35560.1 | 268 | 1808802 | 1809608 | |
| 146336 | hypothetical | BPSL1560 | hypothetical protein C-terminal region similar to Pseudomonas aeruginosa hypothetical protein pa2345 SWALL:Q9I1D3 (EMBL:AE004660) (411 aa) fasta scores: E(): 2.1e-93, 59.66% id in 414 aa, and N-terminal region to Rhodobacter capsulatus hypothetical protein SWALL:O33514 (EMBL:U23145) (146 aa) fasta scores: E(): 1.6e-13, 42.17% id in 147 aa. Posible fusion protein | genbank | 52209608 | CAH35561.1 | 556 | 1809648 | 1811318 | |
| 146337 | hypothetical | BPSL1561 | putative metallo-beta-lactamase family protein Similar to Ralstonia solanacearum hypothetical protein rsc1544 or rs05231 SWALL:Q8XZ60 (EMBL:AL646065) (286 aa) fasta scores: E(): 1.8e-36, 61.3% id in 292 aa, and to Caulobacter crescentus metallo-beta-lactamase family protein cc2866 SWALL:Q9A4G8 (EMBL:AE005951) (267 aa) fasta scores: E(): 2.1e-28, 53.43% id in 277 aa | genbank | 52209609 | CAH35562.1 | 307 | 1811369 | 1812292 | |
| 146338 | hypothetical | BPSL1562 | putative transcriptional regulatory protein C-terminal region similar to Escherichia coli formate hydrogenlyase transcriptional activator FhlA or b2731 SWALL:FHLA_ECOLI (SWALL:P19323) (692 aa) fasta scores: E(): 8e-38, 41.69% id in 331 aa, and to Thiobacillus denitrificans putative transcription regulator SWALL:AAM52226 (EMBL:AY112701) (302 aa) fasta scores: E(): 5e-43, 48% id in 300 aa. Note: N-terminal region (first 100 residues approx.) seems not to have similarities with any database entries | genbank | 52209610 | CAH35563.1 | 467 | 1812459 | 1813862 | |
| 146339 | hypothetical | BPSL1563 | putative membrane protein Similar to Pseudomonas aeruginosa hypothetical protein pa2784 SWALL:Q9I059 (EMBL:AE004706) (185 aa) fasta scores: E(): 3e-30, 51.06% id in 188 aa | genbank | 52209611 | CAH35564.1 | 187 | 1814175 | 1814738 | |
| 146340 | hypothetical | BPSL1564 | putative transcriptional regulatory protein Similar to Pseudomonas aeruginosa hypothetical protein pa2785 SWALL:Q9I058 (EMBL:AE004706) (72 aa) fasta scores: E(): 3.1e-19, 78.26% id in 69 aa, and to Caulobacter crescentus transcriptional regulator, cro/ci family cc3270 SWALL:Q9A3D4 (EMBL:AE005990) (75 aa) fasta scores: E(): 4.1e-16, 67.56% id in 74 aa | genbank | 52209612 | CAH35565.1 | 74 | 1814749 | 1814973 | |
| 146341 | hypothetical | BPSL1565 | putative MerR-family transcriptional regulator Similar to Bradyrhizobium elkanii nodulation protein NolA SWALL:NOLA_BRAEL (SWALL:P50329) (219 aa) fasta scores: E(): 2.1e-14, 31.27% id in 227 aa, and to Streptomyces coelicolor putative transcriptional regulator sco5962 or sc7h1.32C SWALL:O54191 (EMBL:AL021411) (196 aa) fasta scores: E(): 7.9e-14, 39.32% id in 178 aa, and C-terminal region similar to full length of Klebsiella oxytoca albicidin resistance protein SWALL:ALBR_KLEOX (SWALL:P10488) (218 aa) fasta scores: E(): 7e-13, 30.66% id in 212 aa | genbank | 52209613 | CAH35566.1 | 349 | 1816314 | 1817363 | |
| 146342 | hypothetical | BPSL1566 | putative outer membrane lipoprotein Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.4e-21, 30.43% id in 483 aa, and to Ralstonia solanacearum probable outer membrane channel lipoprotein rsc0166 or rs01036 SWALL:Q8Y315 (EMBL:AL646057) (480 aa) fasta scores: E(): 1.1e-51, 45.2% id in 480 aa. Note: This CDS is longer in its C-terminal region than most of its database matches | genbank | 52209614 | CAH35567.1 | 634 | 1817818 | 1819722 | |
| 146343 | hypothetical | BPSL1567 | putative drug-resistance cell envelope-related protein Similar to Ralstonia solanacearum probable transmembrane drug efflux protein rsc1654 or rs05828 SWALL:Q8XYV2 (EMBL:AL646065) (1039 aa) fasta scores: E(): 2.4e-160, 51.37% id in 1057 aa, and to Escherichia coli acriflavine resistance protein F AcrF or EnvD or b3266 SWALL:ACRF_ECOLI (SWALL:P24181) (1034 aa) fasta scores: E(): 3.3e-45, 24.55% id in 1071 aa | genbank | 52209615 | CAH35568.1 | 1056 | 1819725 | 1822895 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146344 | hypothetical | BPSL1568 | putative lipoprotein Similar to Rhizobium loti component of multidrug efflux system mlr7297 SWALL:Q986M0 (EMBL:AP003011) (380 aa) fasta scores: E(): 2.8e-29, 35.97% id in 353 aa, and to Rhizobium loti rnd efflux membrane fusion protein mll5519 SWALL:Q98BL6 (EMBL:AP003006) (356 aa) fasta scores: E(): 1.4e-28, 35.53% id in 363 aa | genbank | 52209616 | CAH35569.1 | 371 | 1822892 | 1824007 | |
| 146345 | hypothetical | BPSL1569 | putative TetR-family regulatory protein Similar to Caulobacter crescentus transcriptional regulator, TetR family cc0732 SWALL:Q9AA74 (EMBL:AE005748) (215 aa) fasta scores: E(): 1.3e-06, 38.46% id in 91 aa, and to Streptomyces coelicolor putative TetR-family regulator sco7303 or sc5f8.13 SWALL:Q9K4L1 (EMBL:AL357613) (193 aa) fasta scores: E(): 3.2e-05, 30.5% id in 177 aa | genbank | 52209617 | CAH35570.1 | 212 | 1824198 | 1824836 | |
| 146346 | hypothetical | BPSL1570 | putative transport-related, membrane protein Similar to Salmonella typhimurium voltage-gated clc-type chloride channel EriC or stm0203 SWALL:ERIC_SALTY (SWALL:Q8ZRP8) (473 aa) fasta scores: E(): 1.8e-25, 28.38% id in 458 aa, and to Ralstonia solanacearum putative chloride channel protein eric-like rsp0020 or rs01992 SWALL:ERIL_RALSO (SWALL:Q8XTT4) (461 aa) fasta scores: E(): 2.9e-85, 54.56% id in 438 aa. Note: this CDS is longer in its C-terminal region than most of its database matches | genbank | 52209618 | CAH35571.1 | 611 | 1825126 | 1826961 | |
| 146347 | hypothetical | BPSL1571 | putative membrane protein Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YeiH or b2158 or z3415 or ecs3050 SWALL:YEIH_ECOLI (SWALL:P33019) (349 aa) fasta scores: E(): 1.1e-39, 37.79% id in 336 aa, and to Pseudomonas aeruginosa hypothetical protein pa5383 SWALL:Q9HTI1 (EMBL:AE004951) (355 aa) fasta scores: E(): 3.7e-44, 44.51% id in 328 aa | genbank | 52209619 | CAH35572.1 | 356 | 1826975 | 1828045 | |
| 146348 | hypothetical | BPSL1572 | putative LysR-family transcriptional regulator Similar to Thiobacillus denitrificans CbbR SWALL:Q9APD4 (EMBL:AF307090) (316 aa) fasta scores: E(): 1e-21, 32.65% id in 297 aa, and to Chromatium vinosum rubisco operon transcriptional regulator RbcR SWALL:RBCR_CHRVI (SWALL:P25544) (302 aa) fasta scores: E(): 1e-20, 32.99% id in 297 aa | genbank | 52209620 | CAH35573.1 | 300 | 1828156 | 1829058 | |
| 146349 | hypothetical | BPSL1573 | putative membrane protein No significant database matches | genbank | 52209621 | CAH35574.1 | 148 | 1829120 | 1829566 | |
| 146350 | hypothetical | BPSL1574 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa2260 or KguE SWALL:Q9I1L3 (EMBL:AE004652) (260 aa) fasta scores: E(): 2.3e-17, 36.36% id in 253 aa | genbank | 52209622 | CAH35575.1 | 254 | 1829790 | 1830554 | |
| 146351 | hypothetical | BPSL1575 | putative sugar kinase Similar to Pseudomonas aeruginosa probable 2-ketogluconate kinase pa2261 SWALL:Q9I1L2 (EMBL:AE004652) (316 aa) fasta scores: E(): 3.5e-65, 61.81% id in 309 aa, and to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 1.4e-14, 33.1% id in 287 aa | genbank | 52209623 | CAH35576.1 | 329 | 1830638 | 1831627 | |
| 146352 | hypothetical | BPSL1576 | putative transport related, membrane protein Similar to Pseudomonas aeruginosa probable 2-ketogluconate transporter pa2262 or KguT SWALL:Q9I1L1 (EMBL:AE004652) (435 aa) fasta scores: E(): 5.4e-116, 73.2% id in 403 aa, and to Yersinia pestis putative sugar transporter ypo2535 SWALL:Q8ZDM7 (EMBL:AJ414152) (443 aa) fasta scores: E(): 1.4e-45, 34.53% id in 417 aa | genbank | 52209624 | CAH35577.1 | 425 | 1831712 | 1832989 | |
| 146353 | tkrA | hypothetical | BPSL1577 | 2-ketogluconate reductase Similar to Erwinia herbicola 2-ketogluconate reductase TkrA SWALL:TKRA_ERWHE (SWALL:P58000) (323 aa) fasta scores: E(): 3.7e-57, 54.79% id in 323 aa, and to Yersinia pestis putative D-isomer specific 2-hydroxyacid dehydrogenase ypo4078 SWALL:Q8Z9W1 (EMBL:AJ414160) (326 aa) fasta scores: E(): 5.6e-64, 58.51% id in 323 aa | genbank | 52209625 | CAH35578.1 | 325 | 1832994 | 1833971 |
| 146354 | hypothetical | BPSL1578 | putative LacI-family transcriptional regulator Similar to Bacillus subtilis kdg operon repressor KdgR SWALL:KDGR_BACSU (SWALL:P50844) (339 aa) fasta scores: E(): 2.6e-32, 33.83% id in 334 aa, and to Clostridium acetobutylicum kdg operon repressor cac0393 SWALL:Q97M07 (EMBL:AE007554) (344 aa) fasta scores: E(): 1.8e-28, 32.94% id in 343 aa | genbank | 52209626 | CAH35579.1 | 347 | 1834579 | 1835622 | |
| 146355 | hypothetical | BPSL1579 | putative membrane protein Similar to Ralstonia solanacearum putative lipoprotein transmembrane rsp0010 or rs01982 SWALL:Q8XTU4 (EMBL:AL646076) (265 aa) fasta scores: E(): 1.8e-29, 39.39% id in 264 aa, and to Streptococcus pneumoniae R6 conserved hypothetical protein spr1248 SWALL:AAL00052 (EMBL:AE008496) (250 aa) fasta scores: E(): 2.3e-12, 28.95% id in 259 aa | genbank | 52209627 | CAH35580.1 | 262 | 1835680 | 1836468 | |
| 146356 | hypothetical | BPSL1580 | hypothetical protein No significant database matches | genbank | 52209628 | CAH35581.1 | 120 | 1836483 | 1836845 | |
| 146357 | hypothetical | BPSL1581 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsp1250 or rs03194 SWALL:Q8XQH5 (EMBL:AL646083) (147 aa) fasta scores: E(): 1.6e-40, 79.72% id in 143 aa | genbank | 52209629 | CAH35582.1 | 144 | 1837334 | 1837768 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 146358 | hypothetical | BPSL1582 | putative depolymerase Similar to Comamonas acidovorans polyhydroxybutyrate depolymerase PhaZ SWALL:O05527 (EMBL:AB003186) (494 aa) fasta scores: E(): 7.1e-45, 45.69% id in 302 aa, and to Streptomyces exfoliatus poly PhaZ SWALL:Q54070 (EMBL:U58990) (488 aa) fasta scores: E(): 8.4e-32, 35.35% id in 297 aa | genbank | 52209630 | CAH35583.1 | 339 | 1837965 | 1838984 |