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UGID:319484     UniGene Mm.229141     Mus musculus (mouse)   Arfgef1 Links
ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) (Arfgef1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_980514.2 PREDICTED: ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) M. musculus 100.0 1845
NP_006412.2 brefeldin A-inhibited guanine nucleotide-exchange protein 1 H. sapiens 99.0 1848
XP_001923315.1 PREDICTED: im:7138204 D. rerio 94.0 1827
NP_609675.2 sec71, isoform A D. melanogaster 74.7 1645
NP_001021798.2 Arf-1 Guanine nucleotide Exchange Factor homolog family member (agef-1) C. elegans 56.6 1565
NP_001090523.1 cytohesin 2 X. laevis 53.2 171
XP_001694943.1 SEC7/BIG-like ARF-guanine nucleotide exchange factor C. reinhardtii 46.0 1426

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mixed; mammary gland; eye; thymus; ovary; testis; intestine; lung; kidney; pancreas; uncharacterized tissue; bone marrow; uterus; stomach; bladder; bone; spinal cord; spleen; salivary gland; dorsal root ganglion; fertilized ovum; liver; skin; extraembryonic tissue; thyroid; tongue; blood; pituitary gland; heart; inner ear; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1 A2
UniSTS entry: D10Mit157.2
UniSTS entry: Chr X D5Mit392.1
UniSTS entry: D9Mit34.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK051592.1 Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130059B05 product:BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 1 (BREFELDIN A-INHIBITED GEP 1) (P200 ARF-GEP1) (P200 ARF GUANINE NUCLEOTIDE EXCH ... P
AK085726.1 Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028O18 product:BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 1 (BREFELDIN A-INHIBITED GEP 1) (P200 ARF-GEP1) (P200 ARF GUANINE ... P
AK082234.1 Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230027C14 product:unclassifiable, full insert sequence
AK035885.1 Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630014D14 product:BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 1 (BREFELDIN A-INHIBITED GEP 1) (P200 ARF-GEP1) (P200 ARF GUANINE NUCLEOTIDE EXCHANGE ... P
BC026644.1 Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited), mRNA (cDNA clone IMAGE:4986499), with apparent retained intron PA
AK134369.1 Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030446C19 product:hypothetical ARM repeat fold containing protein, full insert sequence P
NM_001102430.1 Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) (Arfgef1), mRNA P
BC025221.1 Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited), mRNA (cDNA clone IMAGE:5037434), partial cds PA
BC037453.1 Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited), mRNA (cDNA clone IMAGE:4020499) PA

EST sequences (10 of 342) [Show all sequences]

CA568610.1 Clone NIA:K0429G10_IMAGE:30061905 bone marrow 5' read P
CA575434.1 Clone NIA:K0630F09_IMAGE:30071684 bone marrow 5' read P
BY003469.1 Clone E530113N04 brain 5' read
BY103765.1 Clone K630152G17 mixed 5' read P
BY277042.1 Clone K430324A14 brain 5' read P
BY359575.1 Clone 4022427P04 embryonic tissue 3' read P
BY376367.1 Clone G830033C04 mammary gland 3' read
BY639209.1 Clone K430324A14 brain 3' read
BY730856.1 Clone D730028O18 mammary gland 5' read P
BY738777.1 Clone I920010H14 extraembryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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