rs# on all gene models to Batch Query all rs# to file.   Gene Model (mRNA alignment) information from genome sequence Total gene model (contig mRNA transcript): 4 mrna transcript protein mrna orientation Contig Contig Label List SNP NM_001077446.1 plus strand NP_001070914.1 forward NT_011109.15 reference <- currently shown NM_001077446.1 minus strand NP_001070914.1 reverse NW_001838498.2 HuRef View snp on GeneModel NM_024075.2 plus strand NP_076980.2 forward NT_011109.15 reference View snp on GeneModel NM_024075.2 minus strand NP_076980.2 reverse NW_001838498.2 HuRef View snp on GeneModel Include clinically associated in gene region cSNP has frequency double hit gene model (contig mRNA transcript): Contig Label Contig mrna protein mrna orientation transcript snp count reference NT_011109.15 NM_001077446.1 NP_001070914.1 forward plus strand 7, coding Color Legend Region Contig position mRNA pos dbSNP rs# cluster id Hetero- zygosity Validation 3D Clinically Associated Function dbSNP allele Protein residue Codon pos Amino acid pos PubMed exon_1 26963406 113 start codon 1 exon_1 26963465 172 rs4516340 N.D. synonymous A Gln [Q] 3 20 contig reference G Gln [Q] 3 20 26963565 272 rs11550316 N.D. missense A Thr [T] 1 54 contig reference C Pro [P] 1 54 exon_2 26963852 446 rs17849378 N.D. missense G Val [V] 1 112 contig reference C Leu [L] 1 112 exon_3 26964357 800 rs11879943 0.129 Yes synonymous A Arg [R] 1 230 contig reference C Arg [R] 1 230 exon_4 26965269 907 rs7595 0.401 Yes synonymous T Pro [P] 3 265 contig reference C Pro [P] 3 265 26965281 919 rs15264 N.D. Yes synonymous A Ile [I] 3 269 contig reference C Ile [I] 3 269 26965395 1033 rs17849862 N.D. synonymous T Ala [A] 3 307 contig reference C Ala [A] 3 307

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Revised: May 25, 2006 1:38 PM .