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| 150 | NULL | NULL |
| 109 | IPR002559 | Transposase, IS4-like |
| 73 | IPR010095 | Transposase, IS605 OrfB, C-terminal |
| 73 | IPR003593 | AAA+ ATPase, core |
| 66 | IPR008538 | Protein of unknown function DUF820 |
| 56 | IPR001959 | Transposase (probable), IS891/IS1136/IS1341 |
| 53 | IPR001789 | Response regulator receiver |
| 52 | IPR013026 | Tetratricopeptide region |
| 49 | IPR003439 | ABC transporter related |
| 44 | IPR002711 | HNH endonuclease |
| 43 | IPR013105 | Tetratricopeptide TPR_2 |
| 42 | IPR001440 | Tetratricopeptide TPR_1 |
| 41 | IPR003615 | HNH nuclease |
| 37 | IPR001646 | Pentapeptide repeat |
| 37 | IPR000719 | Protein kinase |
| 36 | IPR005467 | Histidine kinase |
| 36 | IPR004291 | Transposase, IS66 |
| 36 | IPR003594 | ATP-binding region, ATPase-like |
| 33 | IPR011518 | Transposase, Rhodopirellula-type |
| 33 | IPR004358 | Histidine kinase related protein, C-terminal |
| 109 | PF01609 | Transposase_11 |
| 66 | PF05685 | DUF820 |
| 64 | PF07282 | Transposase_35 |
| 56 | PF01385 | Transposase_2 |
| 47 | PF00072 | Response_reg |
| 46 | PF00005 | ABC_tran |
| 44 | PF01844 | HNH |
| 43 | PF07719 | TPR_2 |
| 42 | PF00515 | TPR_1 |
| 37 | PF00805 | Pentapeptide |
| 36 | PF03050 | Transposase_25 |
| 36 | PF02518 | HATPase_c |
| 33 | PF07592 | Transposase_36 |
| 31 | PF08388 | GIIM |
| 31 | PF08241 | Methyltransf_11 |
| 29 | PF08242 | Methyltransf_12 |
| 29 | PF01370 | Epimerase |
| 28 | PF00078 | RVT_1 |
| 27 | PF03681 | UPF0150 |
| 27 | PF00512 | HisKA |
| 42 | TIGR01766 | tspaseT_teng_C |
| 24 | TIGR02595 | PEP_anchor |
| 15 | TIGR00231 | small_GTP |
| 14 | TIGR00254 | GGDEF |
| 13 | TIGR01733 | AA-adenyl-dom |
| 9 | TIGR02937 | sigma70-ECF |
| 9 | TIGR01552 | phd_fam |
| 9 | TIGR00229 | sensory_box |
| 7 | TIGR01784 | T_den_put_tspse |
| 7 | TIGR01444 | fkbM_fam |
| 7 | TIGR00675 | dcm |
| 6 | TIGR02008 | fdx_plant |
| 6 | TIGR00650 | MG442 |
| 5 | TIGR02532 | IV_pilin_GFxxxE |
| 5 | TIGR02385 | RelE_StbE |
| 5 | TIGR01720 | NRPS-para261 |
| 5 | TIGR01409 | TAT_signal_seq |
| 5 | TIGR00305 | TIGR00305 |
| 4 | TIGR02997 | Sig70-cyanoRpoD |
| 4 | TIGR02607 | antidote_HigA |
| 52 | PS50110 | RESPONSE_REGULATORY |
| 48 | PS50293 | TPR_REGION |
| 45 | PS00013 | PROKAR_LIPOPROTEIN |
| 44 | PS50893 | ABC_TRANSPORTER_2 |
| 44 | PS50005 | TPR |
| 36 | PS50109 | HIS_KIN |
| 35 | PS50011 | PROTEIN_KINASE_DOM |
| 33 | PS50878 | RT_POL |
| 22 | PS50075 | ACP_DOMAIN |
| 19 | PS51192 | HELICASE_ATP_BIND_1 |
| 18 | PS51194 | HELICASE_CTER |
| 17 | PS50928 | ABC_TM1 |
| 15 | PS50887 | GGDEF |
| 14 | PS51186 | GNAT |
| 12 | PS51085 | 2FE2S_FER_2 |
| 12 | PS50006 | FHA_DOMAIN |
| 11 | PS50975 | ATP_GRASP |
| 10 | PS50046 | PHYTOCHROME_2 |
| 10 | PS50042 | CNMP_BINDING_3 |
| 9 | PS50943 | HTH_CROC1 |
| 33 | PR00344 | BCTRLSENSOR |
| 18 | PR00154 | AMPBINDING |
| 15 | PR00313 | CABNDNGRPT |
| 13 | PR00368 | FADPNR |
| 13 | PR00081 | GDHRDH |
| 12 | PR00411 | PNDRDTASEI |
| 10 | PR00111 | ABHYDROLASE |
| 9 | PR01415 | ANKYRIN |
| 8 | PR00353 | 4FE4SFRDOXIN |
| 8 | PR00326 | GTP1OBG |
| 8 | PR00046 | SIGMA70FCT |
| 7 | PR00507 | N12N6MTFRASE |
| 7 | PR00421 | THIOREDOXIN |
| 7 | PR00412 | EPOXHYDRLASE |
| 7 | PR00320 | GPROTEINBRPT |
| 7 | PR00315 | ELONGATNFCT |
| 7 | PR00105 | C5METTRFRASE |
| 7 | PR00080 | SDRFAMILY |
| 6 | PR00723 | SUBTILISIN |
| 6 | PR00702 | ACRIFLAVINRP |
| 53 | PD000039 | sp_P73006_SYNY3_P73006; |
| 42 | PD000006 | sp_Q6KHL2_MYCMO_Q6KHL2; |
| 35 | PD000001 | sp_Q8YQF4_ANASP_Q8YQF4; |
| 16 | PD000340 | sp_Q8LKN0_COROI_Q8LKN0; |
| 9 | PD000329 | sp_Q8YS31_ANASP_Q8YS31; |
| 8 | PD000018 | sp_Q8YUJ4_ANASP_Q8YUJ4; |
| 7 | PD000852 | sp_Q7NL61_GLOVI_Q7NL61; |
| 5 | PD023420 | sp_P73806_SYNY3_P73806; |
| 5 | PD023318 | sp_Q9F589_AGRRH_Q9F589; |
| 5 | PD003442 | sp_Q8DJS4_SYNEL_Q8DJS4; |
| 5 | PD001243 | sp_Q8Z0C3_ANASP_Q8Z0C3; |
| 5 | PD001081 | sp_Q704E9_BBBBB_Q704E9; |
| 5 | PD000307 | sp_Q55540_SYNY3_Q55540; |
| 5 | PD000288 | sp_Q8YLN6_ANASP_Q8YLN6; |
| 5 | PD000139 | sp_DLDH_SYNY3_P72740; |
| 4 | PD139017 | sp_Q8YVB4_ANASP_Q8YVB4; |
| 4 | PD023580 | sp_Q6UR88_FREDI_Q6UR88; |
| 4 | PD013066 | sp_Q8R8G2_THETN_Q8R8G2; |
| 4 | PD005210 | sp_Q8YPN3_ANASP_Q8YPN3; |
| 4 | PD003831 | sp_Q8YLC6_ANASP_Q8YLC6; |
| 140 | COG5421 | Transposase |
| 132 | COG0515 | Serine/threonine protein kinase |
| 106 | COG3437 | Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
| 100 | COG2197 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
| 100 | COG0745 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
| 96 | COG1120 | ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components |
| 94 | COG4988 | ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components |
| 94 | COG4987 | ABC-type transport system involved in cytochrome bd biosynthesis fused ATPase and permease components |
| 94 | COG1124 | ABC-type dipeptide/oligopeptide/nickel transport system ATPase component |
| 94 | COG0444 | ABC-type dipeptide/oligopeptide/nickel transport system ATPase component |
| 92 | COG4555 | ABC-type Na+ transport system ATPase component |
| 92 | COG1134 | ABC-type polysaccharide/polyol phosphate transport system ATPase component |
| 90 | COG4615 | ABC-type siderophore export system fused ATPase and permease components |
| 90 | COG4565 | Response regulator of citrate/malate metabolism |
| 89 | COG0675 | Transposase and inactivated derivatives |
| 88 | COG2201 | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
| 82 | COG3279 | Response regulator of the LytR/AlgR family |
| 80 | COG4567 | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
| 78 | COG3063 | Tfp pilus assembly protein PilF |
| 74 | COG0451 | Nucleoside-diphosphate-sugar epimerase |
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