BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= TF1175
(417 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|150007010|ref|YP_001301753.1| efflux transporter, MFP co... 668 0.0
gi|154492711|ref|ZP_02032337.1| hypothetical protein PARMER... 654 0.0
gi|34540477|ref|NP_904956.1| efflux transporter, MFP compon... 489 e-136
gi|88714019|ref|ZP_01108098.1| efflux transporter, MFP comp... 392 e-107
gi|153808108|ref|ZP_01960776.1| hypothetical protein BACCAC... 387 e-106
gi|150006027|ref|YP_001300771.1| ABC transporter permease [... 387 e-105
gi|29346877|ref|NP_810380.1| ABC transporter permease [Bact... 386 e-105
gi|156108074|gb|EDO09819.1| hypothetical protein BACOVA_041... 385 e-105
gi|154490029|ref|ZP_02030290.1| hypothetical protein PARMER... 381 e-104
gi|53712886|ref|YP_098878.1| ABC transporter permease [Bact... 378 e-103
gi|60681104|ref|YP_211248.1| putative HlyD-family transport... 377 e-103
gi|124005830|ref|ZP_01690668.1| ABC transporter permease [M... 295 3e-78
gi|86141783|ref|ZP_01060307.1| efflux transporter, MFP comp... 276 2e-72
gi|126648417|ref|ZP_01720904.1| ABC transporter permease [A... 273 1e-71
gi|120435075|ref|YP_860761.1| HlyD family secretion protein... 270 9e-71
gi|88806509|ref|ZP_01122026.1| efflux transporter, MFP comp... 269 2e-70
gi|90019977|ref|YP_525804.1| ABC transporter permease [Sacc... 258 5e-67
gi|154491994|ref|ZP_02031620.1| hypothetical protein PARMER... 258 6e-67
gi|91218185|ref|ZP_01255133.1| efflux transporter, RND fami... 257 1e-66
gi|71280414|ref|YP_271346.1| efflux transporter, RND family... 256 2e-66
gi|53713659|ref|YP_099651.1| probable ABC transporter perme... 252 3e-65
gi|29346268|ref|NP_809771.1| hypothetical protein BT_0858 [... 249 3e-64
gi|153806346|ref|ZP_01959014.1| hypothetical protein BACCAC... 248 4e-64
gi|150005683|ref|YP_001300427.1| hypothetical protein BVU_3... 248 8e-64
gi|156110333|gb|EDO12078.1| hypothetical protein BACOVA_025... 247 1e-63
gi|149275740|ref|ZP_01881885.1| efflux transporter, MFP com... 239 3e-61
gi|88706289|ref|ZP_01103995.1| ABC transporter permease [ga... 228 6e-58
gi|71280743|ref|YP_270181.1| efflux transporter, RND family... 225 5e-57
gi|88860685|ref|ZP_01135322.1| efflux transporter, RND fami... 214 9e-54
gi|146299091|ref|YP_001193682.1| efflux transporter, RND fa... 210 1e-52
gi|77978814|ref|ZP_00834238.1| COG0845: Membrane-fusion pro... 139 2e-31
gi|51595851|ref|YP_070042.1| hypothetical protein YPTB1514 ... 127 1e-27
gi|153948431|ref|YP_001401446.1| efflux transporter, RND fa... 125 6e-27
gi|16121771|ref|NP_405084.1| hypothetical protein YPO1498 [... 118 9e-25
gi|123443039|ref|YP_001007013.1| hypothetical protein YE282... 113 2e-23
gi|109898555|ref|YP_661810.1| efflux transporter, RND famil... 108 9e-22
gi|21244363|ref|NP_643945.1| ABC transporter permease [Xant... 107 1e-21
gi|113949004|ref|ZP_01434658.1| Secretion protein HlyD [She... 105 6e-21
gi|78049311|ref|YP_365486.1| membrane fusion protein [Xanth... 105 8e-21
gi|85711130|ref|ZP_01042190.1| ABC transporter permease [Id... 104 9e-21
gi|58580368|ref|YP_199384.1| ABC transporter permease [Xant... 103 2e-20
gi|84622334|ref|YP_449706.1| ABC transporter permease [Xant... 101 9e-20
gi|114570243|ref|YP_756923.1| efflux transporter, RND famil... 100 2e-19
gi|149114595|ref|ZP_01841347.1| efflux transporter, RND fam... 100 2e-19
gi|126175541|ref|YP_001051690.1| efflux transporter, RND fa... 100 2e-19
gi|114048652|ref|YP_739202.1| efflux transporter, RND famil... 100 3e-19
gi|152999530|ref|YP_001365211.1| efflux transporter, RND fa... 99 6e-19
gi|24375191|ref|NP_719234.1| hypothetical protein SO_3694 [... 99 7e-19
gi|113969205|ref|YP_732998.1| efflux transporter, RND famil... 98 1e-18
gi|117921700|ref|YP_870892.1| efflux transporter, RND famil... 98 1e-18
gi|21230043|ref|NP_635960.1| ABC transporter permease [Xant... 98 1e-18
gi|94967397|ref|YP_589445.1| Secretion protein HlyD [Acidob... 96 6e-18
gi|120597784|ref|YP_962358.1| efflux transporter, RND famil... 95 8e-18
gi|90019958|ref|YP_525785.1| HlyD family secretion protein ... 94 1e-17
gi|71279929|ref|YP_268844.1| efflux transporter, RND family... 94 1e-17
gi|108763190|ref|YP_635260.1| efflux transporter, RND famil... 93 3e-17
gi|119878373|ref|ZP_01645311.1| efflux transporter, RND fam... 93 3e-17
gi|109898720|ref|YP_661975.1| efflux transporter, RND famil... 92 4e-17
gi|116625535|ref|YP_827691.1| efflux transporter, RND famil... 91 1e-16
gi|37520841|ref|NP_924218.1| hypothetical protein glr1272 [... 90 3e-16
gi|127511655|ref|YP_001092852.1| efflux transporter, RND fa... 89 5e-16
gi|88860790|ref|ZP_01135427.1| efflux transporter, RND fami... 88 1e-15
gi|71279598|ref|YP_267322.1| efflux transporter, RND family... 87 2e-15
gi|114562075|ref|YP_749588.1| efflux transporter, RND famil... 86 6e-15
gi|56461157|ref|YP_156438.1| Membrane-fusion protein homolo... 85 9e-15
gi|88859559|ref|ZP_01134199.1| efflux transporter, RND fami... 83 3e-14
gi|91202210|emb|CAJ75270.1| conserved hypothetical protein ... 83 3e-14
gi|78187549|ref|YP_375592.1| Secretion protein HlyD [Pelodi... 83 3e-14
gi|119775997|ref|YP_928737.1| HlyD family secretion protein... 83 4e-14
gi|150379701|ref|ZP_01918798.1| efflux transporter, RND fam... 82 6e-14
gi|150008585|ref|YP_001303328.1| ABC transporter permease [... 82 7e-14
gi|91794203|ref|YP_563854.1| Secretion protein HlyD [Shewan... 82 7e-14
gi|153808633|ref|ZP_01961301.1| hypothetical protein BACCAC... 82 8e-14
gi|156108152|gb|EDO09897.1| hypothetical protein BACOVA_042... 81 1e-13
gi|118071791|ref|ZP_01539984.1| efflux transporter, RND fam... 80 2e-13
gi|88857561|ref|ZP_01132204.1| efflux transporter, RND fami... 80 3e-13
gi|154490990|ref|ZP_02030931.1| hypothetical protein PARMER... 80 3e-13
gi|86140725|ref|ZP_01059284.1| membrane fusion efflux prote... 80 3e-13
gi|34540125|ref|NP_904604.1| efflux transporter, MFP compon... 77 2e-12
gi|37520344|ref|NP_923721.1| hypothetical protein gll0775 [... 77 2e-12
gi|118756232|ref|ZP_01604013.1| efflux transporter, RND fam... 76 4e-12
gi|149276412|ref|ZP_01882556.1| ABC transporter permease [P... 76 5e-12
gi|110597863|ref|ZP_01386146.1| Secretion protein HlyD [Chl... 75 1e-11
gi|148358371|ref|YP_001249578.1| hypothetical protein LPC_0... 74 1e-11
gi|118746818|ref|ZP_01594733.1| efflux transporter, RND fam... 74 2e-11
gi|119469565|ref|ZP_01612469.1| hypothetical protein ATW7_0... 74 2e-11
gi|29346946|ref|NP_810449.1| ABC transporter permease [Bact... 74 2e-11
gi|118754846|ref|ZP_01602640.1| hypothetical protein SpeaDR... 73 3e-11
gi|119356317|ref|YP_910961.1| efflux transporter, RND famil... 73 3e-11
gi|145220284|ref|YP_001130993.1| efflux transporter, RND fa... 72 7e-11
gi|126736695|ref|ZP_01752434.1| efflux transporter, RND fam... 72 7e-11
gi|86132021|ref|ZP_01050617.1| membrane fusion efflux prote... 72 8e-11
gi|150004880|ref|YP_001299624.1| ABC transporter permease [... 71 1e-10
gi|71278458|ref|YP_267523.1| efflux transporter, RND family... 71 1e-10
gi|114567228|ref|YP_754382.1| Multidrug resistance efflux p... 71 1e-10
gi|88857314|ref|ZP_01131957.1| hypothetical protein PTD2_02... 71 2e-10
gi|126662947|ref|ZP_01733945.1| cation efflux system protei... 70 2e-10
gi|60680939|ref|YP_211083.1| putative ABC transporter compo... 70 2e-10
gi|156858281|gb|EDO51712.1| hypothetical protein BACUNI_042... 70 2e-10
gi|83814818|ref|YP_444862.1| putative HlyD-like secretion p... 70 3e-10
gi|53712790|ref|YP_098782.1| ABC transporter permease [Bact... 70 3e-10
gi|54293172|ref|YP_125587.1| hypothetical protein lpl0218 [... 70 3e-10
gi|78356009|ref|YP_387458.1| Secretion protein HlyD [Desulf... 70 4e-10
gi|109897361|ref|YP_660616.1| efflux transporter, RND famil... 70 4e-10
gi|83645035|ref|YP_433470.1| Membrane-fusion protein [Hahel... 69 4e-10
gi|146282860|ref|YP_001173013.1| membrane fusion protein [P... 69 5e-10
gi|106895032|ref|ZP_01362141.1| Secretion protein HlyD [Clo... 69 8e-10
gi|154250632|ref|YP_001411456.1| efflux transporter, RND fa... 68 1e-09
gi|32034728|ref|ZP_00134859.1| COG0845: Membrane-fusion pro... 67 2e-09
gi|88705198|ref|ZP_01102909.1| HlyD family secretion protei... 67 2e-09
gi|154248146|ref|YP_001419104.1| efflux transporter, RND fa... 67 2e-09
gi|110678663|ref|YP_681670.1| efflux transporter, RND famil... 67 2e-09
gi|150017763|ref|YP_001310017.1| efflux transporter, RND fa... 67 3e-09
gi|153093636|gb|EDN74598.1| possible Acr family acridine ef... 66 4e-09
gi|39997916|ref|NP_953867.1| HlyD family secretion protein ... 66 4e-09
gi|94967339|ref|YP_589387.1| secretion protein HlyD [Acidob... 66 5e-09
gi|149369682|ref|ZP_01889534.1| membrane fusion efflux prot... 66 5e-09
gi|34540353|ref|NP_904832.1| efflux transporter, MFP compon... 66 6e-09
gi|148253371|ref|YP_001237956.1| Putative efflux transporte... 65 6e-09
gi|78188536|ref|YP_378874.1| Secretion protein HlyD [Chloro... 65 6e-09
gi|84502248|ref|ZP_01000396.1| hypothetical protein OB2597_... 65 7e-09
gi|77635161|ref|ZP_00797249.1| COG0845: Membrane-fusion pro... 65 1e-08
gi|16121644|ref|NP_404957.1| putative HlyD family secretion... 65 1e-08
gi|56476637|ref|YP_158226.1| cation efflux system transmemb... 65 1e-08
gi|88857051|ref|ZP_01131694.1| efflux transporter, RND fami... 64 1e-08
gi|37519915|ref|NP_923292.1| hypothetical protein gll0346 [... 64 1e-08
gi|88806246|ref|ZP_01121764.1| hypothetical protein RB2501_... 64 1e-08
gi|153949946|ref|YP_001401576.1| macrolide-specific efflux ... 64 2e-08
gi|68548838|ref|ZP_00588307.1| Secretion protein HlyD [Pelo... 64 2e-08
gi|83646481|ref|YP_434916.1| Membrane-fusion protein [Hahel... 64 2e-08
gi|78221879|ref|YP_383626.1| Secretion protein HlyD [Geobac... 64 2e-08
gi|67939290|ref|ZP_00531796.1| Secretion protein HlyD [Chlo... 64 2e-08
gi|83591143|ref|YP_431152.1| Secretion protein HlyD [Moorel... 64 3e-08
gi|148266239|ref|YP_001232945.1| efflux transporter, RND fa... 64 3e-08
gi|150026154|ref|YP_001296980.1| Probable membrane fusion e... 64 3e-08
gi|37522064|ref|NP_925441.1| HlyD family secretion protein ... 64 3e-08
gi|67938718|ref|ZP_00531239.1| Secretion protein HlyD [Chlo... 63 3e-08
gi|110638901|ref|YP_679110.1| cation efflux system protein/... 63 3e-08
gi|121533334|ref|ZP_01665162.1| efflux transporter, RND fam... 63 3e-08
gi|126660817|ref|ZP_01731912.1| Secretion protein HlyD [Cya... 63 4e-08
gi|55509027|gb|AAV52812.1| probable RND efflux membrane-fus... 63 4e-08
gi|126647871|ref|ZP_01720376.1| hypothetical protein ALPR1_... 63 4e-08
gi|153809409|ref|ZP_01962077.1| hypothetical protein BACCAC... 63 4e-08
gi|153889537|ref|ZP_02010648.1| efflux transporter, RND fam... 63 5e-08
gi|121533547|ref|ZP_01665375.1| secretion protein HlyD fami... 62 5e-08
gi|91975948|ref|YP_568607.1| secretion protein HlyD [Rhodop... 62 5e-08
gi|124003345|ref|ZP_01688195.1| secretion protein HlyD [Mic... 62 5e-08
gi|146299432|ref|YP_001194023.1| efflux transporter, RND fa... 62 6e-08
gi|147679121|ref|YP_001213336.1| hypothetical membrane prot... 62 6e-08
gi|67918318|ref|ZP_00511917.1| Secretion protein HlyD [Chlo... 62 6e-08
gi|68551938|ref|ZP_00591331.1| Secretion protein HlyD [Pros... 62 6e-08
gi|120556402|ref|YP_960753.1| efflux transporter, RND famil... 62 6e-08
gi|146342764|ref|YP_001207812.1| Putative efflux transporte... 62 7e-08
gi|94970558|ref|YP_592606.1| secretion protein HlyD [Acidob... 62 7e-08
gi|148241496|ref|YP_001226653.1| Possible membrane-fusion p... 62 8e-08
gi|123441826|ref|YP_001005810.1| putative HlyD family secre... 62 8e-08
gi|89073893|ref|ZP_01160400.1| membrane-fusion protein [Pho... 62 8e-08
gi|90581494|ref|ZP_01237288.1| membrane-fusion protein [Vib... 62 8e-08
gi|150017335|ref|YP_001309589.1| efflux transporter, RND fa... 62 8e-08
gi|39934718|ref|NP_946994.1| membrane permeases, predicted ... 62 9e-08
gi|45441057|ref|NP_992596.1| putative HlyD family secretion... 62 1e-07
gi|149279612|ref|ZP_01885741.1| membrane fusion efflux prot... 62 1e-07
gi|120434570|ref|YP_860263.1| HlyD family secretion protein... 61 1e-07
gi|77979259|ref|ZP_00834679.1| COG0845: Membrane-fusion pro... 61 1e-07
gi|77974822|ref|ZP_00830360.1| COG0845: Membrane-fusion pro... 61 1e-07
gi|116626959|ref|YP_829115.1| secretion protein HlyD family... 61 2e-07
gi|68552102|ref|ZP_00591494.1| Secretion protein HlyD [Pros... 60 2e-07
gi|78484587|ref|YP_390512.1| Secretion protein HlyD [Thiomi... 60 3e-07
gi|86750991|ref|YP_487487.1| Secretion protein HlyD [Rhodop... 60 3e-07
gi|89211814|ref|ZP_01190152.1| Secretion protein HlyD [Halo... 60 3e-07
gi|121533620|ref|ZP_01665447.1| efflux transporter, RND fam... 60 3e-07
gi|77917886|ref|YP_355701.1| putative MacA-like membrane tr... 60 4e-07
gi|83815478|ref|YP_446939.1| membrane fusion efflux protein... 60 4e-07
gi|148241814|ref|YP_001226971.1| Membrane-fusion protein [S... 60 4e-07
gi|86159831|ref|YP_466616.1| secretion protein HlyD [Anaero... 59 4e-07
gi|71277837|ref|YP_271064.1| efflux transporter, RND family... 59 4e-07
gi|106893515|ref|ZP_01360640.1| Secretion protein HlyD [Clo... 59 4e-07
gi|34498160|ref|NP_902375.1| probable membrane protein [Chr... 59 4e-07
gi|149927995|ref|ZP_01916244.1| secretion protein HlyD [Lim... 59 4e-07
gi|156111128|gb|EDO12873.1| hypothetical protein BACOVA_013... 59 5e-07
gi|67919446|ref|ZP_00513023.1| Secretion protein HlyD [Chlo... 59 5e-07
gi|148256510|ref|YP_001241095.1| putative exported protein ... 59 5e-07
gi|146306950|ref|YP_001187415.1| efflux transporter, RND fa... 59 5e-07
gi|150009936|ref|YP_001304679.1| periplasmic component of e... 59 6e-07
gi|91226392|ref|ZP_01261191.1| putative cation efflux syste... 59 7e-07
gi|37520064|ref|NP_923441.1| hypothetical protein gll0495 [... 59 7e-07
gi|110598237|ref|ZP_01386513.1| Secretion protein HlyD [Chl... 59 7e-07
gi|114799816|ref|YP_760354.1| efflux transporter, RND famil... 59 8e-07
gi|29654088|ref|NP_819780.1| efflux transporter, RND family... 59 8e-07
gi|154706493|ref|YP_001424162.1| efflux transporter, RND fa... 59 8e-07
gi|75909070|ref|YP_323366.1| Secretion protein HlyD [Anabae... 59 8e-07
gi|126656746|ref|ZP_01727960.1| Secretion protein HlyD [Cya... 58 9e-07
gi|150388437|ref|YP_001318486.1| efflux transporter, RND fa... 58 1e-06
gi|145300464|ref|YP_001143305.1| ABC-type macrolide transpo... 58 1e-06
gi|83951073|ref|ZP_00959806.1| HlyD family secretion protei... 58 1e-06
gi|95926295|ref|ZP_01309095.1| hypothetical protein CburR_0... 58 1e-06
gi|115525949|ref|YP_782860.1| efflux transporter, RND famil... 58 1e-06
gi|150388202|ref|YP_001318251.1| efflux transporter, RND fa... 58 1e-06
gi|126664701|ref|ZP_01735685.1| Secretion protein HlyD [Mar... 58 1e-06
gi|156859539|gb|EDO52970.1| hypothetical protein BACUNI_037... 58 1e-06
gi|58582642|ref|YP_201658.1| hypothetical protein XOO3019 [... 58 1e-06
gi|126645596|ref|ZP_01718140.1| membrane fusion efflux prot... 58 1e-06
gi|145219527|ref|YP_001130236.1| efflux transporter, RND fa... 58 1e-06
gi|117617817|ref|YP_857493.1| macrolide-specific efflux pro... 58 1e-06
gi|153209395|ref|ZP_01947381.1| efflux transporter, RND fam... 58 2e-06
gi|113935609|ref|ZP_01421506.1| Secretion protein HlyD [Cau... 57 2e-06
gi|39997874|ref|NP_953825.1| efflux transporter, RND family... 57 2e-06
gi|154245006|ref|YP_001415964.1| efflux transporter, RND fa... 57 2e-06
gi|153011541|ref|YP_001372755.1| secretion protein HlyD fam... 57 2e-06
gi|118736113|ref|ZP_01584568.1| efflux transporter, RND fam... 57 2e-06
gi|94263501|ref|ZP_01287313.1| Secretion protein HlyD [delt... 57 2e-06
gi|53711973|ref|YP_097965.1| putative membrane fusion prote... 57 2e-06
gi|15606391|ref|NP_213771.1| cation efflux system (czcB-lik... 57 2e-06
gi|53711849|ref|YP_097841.1| membrane fusion efflux protein... 57 2e-06
gi|60680077|ref|YP_210221.1| putative transport/efflux comp... 57 3e-06
gi|71907884|ref|YP_285471.1| Secretion protein HlyD [Dechlo... 57 3e-06
gi|89889563|ref|ZP_01201074.1| putative membrane fusion eff... 57 3e-06
gi|56479465|ref|YP_161054.1| putative HlyD-like secretion p... 57 3e-06
gi|21674170|ref|NP_662235.1| membrane fusion efflux protein... 57 3e-06
gi|120586939|ref|YP_961284.1| secretion protein HlyD family... 57 3e-06
gi|114320545|ref|YP_742228.1| efflux transporter, RND famil... 57 3e-06
gi|89896572|ref|YP_520059.1| hypothetical protein DSY3826 [... 57 3e-06
gi|123441539|ref|YP_001005525.1| putative HlyD family secre... 57 3e-06
gi|118745393|ref|ZP_01593368.1| secretion protein HlyD [Geo... 56 4e-06
gi|56385100|gb|AAV85981.1| MacA [Neisseria gonorrhoeae] 56 4e-06
gi|78047988|ref|YP_364163.1| membrane fusion protein [Xanth... 56 4e-06
gi|56460331|ref|YP_155612.1| Membrane-fusion protein, RND-l... 56 4e-06
gi|77166387|ref|YP_344912.1| Secretion protein HlyD [Nitros... 56 4e-06
gi|109647205|ref|ZP_01371109.1| efflux transporter, RND fam... 56 4e-06
gi|126665363|ref|ZP_01736345.1| AcrA/AcrE family protein [M... 56 4e-06
gi|59801782|ref|YP_208494.1| putative ABC transporter, peri... 56 4e-06
gi|84394500|ref|ZP_00993211.1| membrane-fusion protein [Vib... 56 5e-06
gi|15605827|ref|NP_213204.1| hypothetical protein aq_294 [A... 56 5e-06
gi|113933101|ref|ZP_01419003.1| Secretion protein HlyD [Cau... 56 5e-06
gi|119947305|ref|YP_944985.1| efflux transporter, RND famil... 56 5e-06
gi|77165025|ref|YP_343550.1| Secretion protein HlyD [Nitros... 56 5e-06
gi|39933175|ref|NP_945451.1| putative multidrug efflux memb... 56 6e-06
gi|146298924|ref|YP_001193515.1| secretion protein HlyD fam... 56 6e-06
gi|104783701|ref|YP_610199.1| multidrug RND transporter, me... 55 6e-06
gi|78484799|ref|YP_390724.1| Secretion protein HlyD [Thiomi... 55 6e-06
gi|114320342|ref|YP_742025.1| efflux transporter, RND famil... 55 6e-06
gi|126648784|ref|ZP_01721267.1| efflux transporter, RND fam... 55 6e-06
gi|86140817|ref|ZP_01059376.1| probable HlyD-family secreti... 55 7e-06
gi|10956845|ref|NP_049065.1| putative aromatic efflux pump ... 55 7e-06
gi|78777559|ref|YP_393874.1| Secretion protein HlyD [Thiomi... 55 7e-06
gi|17228998|ref|NP_485546.1| hypothetical protein alr1505 [... 55 7e-06
gi|119773281|ref|YP_926021.1| secretion protein HlyD [Shewa... 55 7e-06
gi|120553248|ref|YP_957599.1| efflux transporter, RND famil... 55 7e-06
gi|152983106|ref|YP_001353461.1| cobalt-zinc-cadmium resist... 55 8e-06
gi|150388153|ref|YP_001318202.1| efflux transporter, RND fa... 55 8e-06
gi|91793093|ref|YP_562744.1| secretion protein HlyD [Shewan... 55 8e-06
gi|94497881|ref|ZP_01304446.1| putative aromatic efflux pum... 55 8e-06
gi|121634343|ref|YP_974588.1| putative periplasmic protein ... 55 8e-06
gi|113868162|ref|YP_726651.1| Cobalt-zinc-cadmium resistanc... 55 8e-06
gi|119899244|ref|YP_934457.1| cation efflux transmembrane p... 55 9e-06
gi|126663117|ref|ZP_01734115.1| membrane fusion efflux prot... 55 9e-06
gi|126668981|ref|ZP_01739920.1| Secretion protein HlyD [Mar... 55 9e-06
gi|153837826|ref|ZP_01990493.1| copper/silver resistance pe... 55 9e-06
gi|28900336|ref|NP_799991.1| putative cation efflux system ... 55 1e-05
gi|116073127|ref|ZP_01470389.1| possible membrane fusion pr... 55 1e-05
gi|15606100|ref|NP_213477.1| acriflavin resistance protein ... 55 1e-05
gi|145299911|ref|YP_001142752.1| secretion protein, HlyD fa... 55 1e-05
gi|77163827|ref|YP_342352.1| Secretion protein HlyD [Nitros... 55 1e-05
>gi|150007010|ref|YP_001301753.1| efflux transporter, MFP component, RND family [Parabacteroides
distasonis ATCC 8503]
gi|149935434|gb|ABR42131.1| efflux transporter, MFP component, RND family [Parabacteroides
distasonis ATCC 8503]
Length = 416
Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats.
Identities = 341/415 (82%), Positives = 391/415 (94%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MDIQLEKKKG++KKH+PY+ GG+ F++L+GW+IFG+HASTL+VDARGISIG+VT EQFND
Sbjct: 1 MDIQLEKKKGLQKKHIPYVAGGVLFVILLGWIIFGDHASTLKVDARGISIGNVTREQFND 60
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
F R+DGQVQPITVVQLSPEEGGIVQEKVVEEGAQV++GDIIVRLSNSNLDLQILNAEAEL
Sbjct: 61 FFRMDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVKKGDIIVRLSNSNLDLQILNAEAEL 120
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
AEKQN LRNTQVTMEQD+L N+ EKLQ D+D+ R +R++ QQE+LY E LIA+ED+L+AK
Sbjct: 121 AEKQNFLRNTQVTMEQDKLTNQMEKLQYDMDMNRARRSFNQQEQLYKENLIAKEDYLKAK 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
ED+EL QKHALI ERL QDSI R+IQMD+ME +LANMR+N+LLIRERKENLNVRSQIDG
Sbjct: 181 EDFELASQKHALITERLRQDSISRTIQMDEMEASLANMRKNILLIRERKENLNVRSQIDG 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
ELGLLDVVLGQ+++PGQKIGQINDLSDYKIEA+IDEHYIDRVK GL+A FERQG +F+L+
Sbjct: 241 ELGLLDVVLGQSINPGQKIGQINDLSDYKIEAMIDEHYIDRVKPGLSAAFERQGSSFDLT 300
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINL+LGQPTESIIIPKGTFFQSTGG+
Sbjct: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLELGQPTESIIIPKGTFFQSTGGS 360
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
WIFVLD DGKKAYRR I+IGRQNPQYYEVLEGLEAGE+V++SSYESYK++E+L+L
Sbjct: 361 WIFVLDPDGKKAYRRSIKIGRQNPQYYEVLEGLEAGEKVIVSSYESYKDNEVLVL 415
>gi|154492711|ref|ZP_02032337.1| hypothetical protein PARMER_02348 [Parabacteroides merdae ATCC
43184]
gi|154087016|gb|EDN86061.1| hypothetical protein PARMER_02348 [Parabacteroides merdae ATCC
43184]
Length = 416
Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats.
Identities = 334/415 (80%), Positives = 391/415 (94%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MDIQLEKKKG +KKH+PY+ GG FL+LVGW++FG+HASTL+VDARG++IG+VT EQFND
Sbjct: 1 MDIQLEKKKGFQKKHIPYVAGGAFFLILVGWIVFGDHASTLKVDARGVNIGNVTKEQFND 60
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
FVRV+GQVQPITVVQLSPEEGGIVQEKVVEEGAQV++GD+I+RLSNSNLDLQIL+AEA+L
Sbjct: 61 FVRVNGQVQPITVVQLSPEEGGIVQEKVVEEGAQVKKGDVIIRLSNSNLDLQILDAEAQL 120
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
AEKQN LRNTQVTMEQD+L N+ EK QLD+D+TR +R Y QQ+KLY+E LIA+E+FL+AK
Sbjct: 121 AEKQNFLRNTQVTMEQDKLNNQLEKAQLDVDMTRYRRAYNQQKKLYEENLIAKEEFLKAK 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
ED+EL +K+ L++ERL QDSI R+IQMD+ME +L+NMR+N+ L+ ERKE+LNVRSQIDG
Sbjct: 181 EDFELASKKYDLVVERLRQDSISRTIQMDEMETSLSNMRKNIALVHERKEHLNVRSQIDG 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
ELGLLDVVLGQNVS GQKIGQINDLSDYKIEALIDEHYIDRVK GL+ATFERQG +FEL+
Sbjct: 241 ELGLLDVVLGQNVSAGQKIGQINDLSDYKIEALIDEHYIDRVKKGLSATFERQGSDFELN 300
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINL+LGQPTESIIIP+GTFFQSTGG+
Sbjct: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLELGQPTESIIIPRGTFFQSTGGS 360
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
WIFVLDKDGKKAYRRKI+IGRQNPQYYEV++GLEAGE+V++SSYESYK++E+L+L
Sbjct: 361 WIFVLDKDGKKAYRRKIKIGRQNPQYYEVIDGLEAGEKVIVSSYESYKDNEVLVL 415
>gi|34540477|ref|NP_904956.1| efflux transporter, MFP component, RND family [Porphyromonas
gingivalis W83]
gi|34396790|gb|AAQ65855.1| efflux transporter, MFP component, RND family [Porphyromonas
gingivalis W83]
Length = 417
Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats.
Identities = 255/417 (61%), Positives = 322/417 (77%), Gaps = 1/417 (0%)
Query: 1 MDIQLEKKKG-IRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFN 59
MD ++EKKK I +K+ PY G I L L W +FGNH++ R + ISI V +FN
Sbjct: 1 MDRKIEKKKTLIPRKYYPYAGGAIVILALAAWAVFGNHSTKFRAERARISIDSVRQGEFN 60
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
D+VR++GQVQPI +Q+S EGG+V EK VEEGA V +GDIIVRL+N L+L IL++EA+
Sbjct: 61 DYVRINGQVQPINSIQISAVEGGMVAEKTVEEGAMVHKGDIIVRLTNPMLNLNILDSEAQ 120
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQA 179
LAEKQN LRNTQVTMEQDRL K E L L LDI R++R Q +LY EKL +RE++LQA
Sbjct: 121 LAEKQNFLRNTQVTMEQDRLNLKRESLNLRLDIERKKRKAEQYARLYKEKLCSREEYLQA 180
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQID 239
EDY+ + L++ER QDS+YR IQ+ QME++L NMRRN+ ++R R E+LNV++ D
Sbjct: 181 GEDYQYAVEGSRLVMERQRQDSLYRGIQVRQMEESLHNMRRNLEMVRARVEDLNVKAPAD 240
Query: 240 GELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
G+LGLLDV +GQ V G +IGQIN LSDYK+EA+IDEHYIDRVKAGLAA+FERQG +F L
Sbjct: 241 GQLGLLDVEIGQTVGAGSRIGQINVLSDYKVEAMIDEHYIDRVKAGLAASFERQGRDFSL 300
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
VRKVYPEVRD +FRTDF+F GERPDNIR+GQTYYINL+LGQP+E+I+IP+G F+Q+TGG
Sbjct: 301 RVRKVYPEVRDKQFRTDFIFDGERPDNIRTGQTYYINLRLGQPSEAIMIPRGAFYQNTGG 360
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILILS 416
WIFV+ DGK+A RR I I RQNPQYYEV GL AGE V+ SSY+ + ++E +IL+
Sbjct: 361 RWIFVVTPDGKRAVRRDITIARQNPQYYEVTSGLHAGEMVITSSYDMFGDAEEIILN 417
>gi|88714019|ref|ZP_01108098.1| efflux transporter, MFP component, RND family protein
[Flavobacteriales bacterium HTCC2170]
gi|88707670|gb|EAQ99911.1| efflux transporter, MFP component, RND family protein
[Flavobacteriales bacterium HTCC2170]
Length = 416
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 196/415 (47%), Positives = 297/415 (71%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MDI++EKKKG++ KH YI G I L ++ ++ ST R + +S+G +T +F+D
Sbjct: 1 MDIKIEKKKGLKPKHYAYIAGAILLLFVLYKLVMSTSVSTFRAEKDKLSLGEITQGKFDD 60
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
++ ++G V PI + + EGG V EK++EEGA V++GDII++L N NL QIL +E+ L
Sbjct: 61 YITINGNVAPIATIYMDAYEGGRVNEKLIEEGAMVKKGDIILKLENMNLYEQILASESNL 120
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
A KQN LR+T++T + ++ + D+ R +R + Q + LY+E+LI++E +L +K
Sbjct: 121 ALKQNDLRSTKLTFDSRQVEGRRSLATASTDLQRLKRNFEQNQALYNEELISKETYLLSK 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
E+YEL Q++H ++ + D R + ++ +LA M++ + ++ ER ++LNVR+ DG
Sbjct: 181 ENYELSQKQHDIVKMQTVNDDELRKTSLTGLDADLARMKKTLGMVYERLDHLNVRAPADG 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
+LG LD +GQN+ G++IGQIN L+D+KIEA IDEHYIDRVK L ATFER G +EL
Sbjct: 241 QLGFLDAEIGQNIGQGERIGQINVLTDFKIEADIDEHYIDRVKRDLNATFERNGQEYELR 300
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
+RKVYPEVR G+F+ D VFTG++P+NIR+GQ+Y I LQLG+ ++++++PKG+FFQSTGG
Sbjct: 301 LRKVYPEVRSGRFKVDLVFTGDKPENIRAGQSYNIKLQLGESSDALLLPKGSFFQSTGGQ 360
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
WIFV++++G +A RR IRIG+QN +YYEVLEGLE GE+V+ S+Y S+ +E ++L
Sbjct: 361 WIFVVNQNGGEALRRDIRIGKQNSRYYEVLEGLEPGEQVITSNYASFGEAEKIVL 415
>gi|153808108|ref|ZP_01960776.1| hypothetical protein BACCAC_02394 [Bacteroides caccae ATCC 43185]
gi|149129011|gb|EDM20227.1| hypothetical protein BACCAC_02394 [Bacteroides caccae ATCC 43185]
Length = 415
Score = 387 bits (995), Expect = e-106, Method: Composition-based stats.
Identities = 204/416 (49%), Positives = 309/416 (74%), Gaps = 3/416 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFN 59
MD +E+K GI +KHL Y++GGIAF++ +V + IF + S++ V+ ++I V +FN
Sbjct: 1 MDTPIERKPGITRKHL-YVIGGIAFVIAVVLYFIFRDTTSSMTVEKERLTIATVNRGEFN 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
D++RV GQV P ++ + EGG V+E++ EEGA V+ GD+I+RLSN L++ I+ +EA+
Sbjct: 60 DYIRVIGQVMPNRIIYMDAVEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEAD 119
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQA 179
LA ++N LRNT+++MEQ+RLR K E++ L+ D +QR Y Q +L E+LIA ED+ A
Sbjct: 120 LAYQENELRNTRISMEQERLRLKQERIGLNKDRLVKQRRYEQYSRLIKEQLIAEEDYRLA 179
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQID 239
KE+Y+ +++ +I ER+ QD+I+R Q++ +++N+ NM++++ L+RER ENL V++ ID
Sbjct: 180 KEEYDAAKEQLDVIDERIRQDNIFRESQVNSLDENIRNMKQSLALVRERIENLKVKAPID 239
Query: 240 GELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
G++G LD +GQ+++ G+ IGQI SD K++A IDEHY++RV GL A F R G +++L
Sbjct: 240 GQVGNLDAQIGQSIAAGEHIGQIIT-SDLKVQAQIDEHYVERVVPGLPADFTRDGVSYKL 298
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
V K YPEV++G+FRTD FT RP+NIR+GQTY+INLQLG P ++I++P+G FFQ +GG
Sbjct: 299 EVTKPYPEVKEGQFRTDLQFTAGRPENIRAGQTYHINLQLGDPAQAILVPRGGFFQISGG 358
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
W++V+D+ GK A R+ IRIGRQNPQYYEV EGL+ G+RV++S YE + ++E LIL
Sbjct: 359 RWMYVVDESGKFAIRQPIRIGRQNPQYYEVTEGLKPGDRVIVSGYELFGDNEKLIL 414
>gi|150006027|ref|YP_001300771.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
gi|149934451|gb|ABR41149.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
Length = 416
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 202/417 (48%), Positives = 307/417 (73%), Gaps = 1/417 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MD +E+KK + + G + L+ V + IF + S++ +D I+I VT +FND
Sbjct: 1 MDTLIERKKRFTPRRIYGGAGVLFILVFVFYFIFRDTGSSMTIDKSRITIATVTENEFND 60
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
+VRV GQV P ++ L EGG V+E++ EEGA V++GD+I+RLSN L++ I+ +EA+L
Sbjct: 61 YVRVIGQVLPSRMIYLDAIEGGRVEERLHEEGAMVKKGDVILRLSNPLLNIGIMQSEADL 120
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
A ++N LRNT+++MEQ+RL K +++ + + ++R Y Q ++L + +LIARED+LQA
Sbjct: 121 AYQENELRNTRISMEQERLSLKQDRIGIQKEFIIKKRRYGQYKRLMEGQLIAREDYLQAT 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
E+YE V+++ +++ ER+ QDS++R Q+ +++N+ NM+R++ L+RER ENL V++ IDG
Sbjct: 181 EEYEAVKEQLSVLDERIRQDSLFRLTQISSLDENIMNMKRSLALVRERLENLKVKAPIDG 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
++G L+ +GQ++S G+ IGQI +D K++ALIDEHY++RV L A F R G N++L
Sbjct: 241 QVGNLEAQIGQSISAGEHIGQIIT-ADLKVQALIDEHYVERVVQELPADFTRDGENYKLE 299
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
V KVYPEV+DG+FRTDF FT RP+NIR+GQTY+INLQLG P ++++IP+G FFQ TGG
Sbjct: 300 VTKVYPEVKDGQFRTDFRFTTGRPENIRAGQTYHINLQLGDPVKAVLIPRGGFFQITGGR 359
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILILSK 417
WI+V+D+ GK A RR I+IGRQNPQ+YEV +GL +GE+V+IS YE + ++E LIL++
Sbjct: 360 WIYVVDESGKFAVRRPIKIGRQNPQFYEVTDGLASGEKVIISGYELFGDNEKLILNE 416
>gi|29346877|ref|NP_810380.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|29338774|gb|AAO76574.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
Length = 415
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 204/416 (49%), Positives = 311/416 (74%), Gaps = 3/416 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAF-LLLVGWMIFGNHASTLRVDARGISIGHVTHEQFN 59
MD +E+K GI +KHL Y +GG+A + ++ + IF + AS++ V+ ++I V +FN
Sbjct: 1 MDTPVERKPGINRKHL-YTIGGVALGIAVILYFIFRDTASSMTVEKDRLTIATVKQAEFN 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
D++RV GQV P ++ + EGG V+E++ EEGA V+ GD+I+RLSN L++ I+ +EA+
Sbjct: 60 DYIRVIGQVMPSRIIYMDAIEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEAD 119
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQA 179
LA ++N LRNT+++MEQ+RL+ K E++ L+ ++T ++R Y Q +L +E+LIAREDF QA
Sbjct: 120 LAYQENELRNTRISMEQERLQLKQERIGLNKELTLKKRRYEQYRRLVEEQLIAREDFRQA 179
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQID 239
+E+YE +++ A+I ER+ QD+I+R Q+ +++N+ NM+R++ L+RER ENL +++ ID
Sbjct: 180 EEEYEAAKEQLAVIDERIRQDNIFRESQISSLDENIRNMKRSLTLVRERLENLKIKAPID 239
Query: 240 GELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
G++G L+ +GQ++S G+ IGQI D K++A IDEHY++RV GL A F R GG ++L
Sbjct: 240 GQVGNLNAQVGQSISAGEHIGQIIT-PDLKVQAQIDEHYVERVLPGLPADFTRDGGTYKL 298
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
V K YPEV++G+FRTD F ERP+NIR+GQTY+INLQLG P ++I++P+G FFQ TGG
Sbjct: 299 EVTKPYPEVKEGQFRTDLAFISERPENIRAGQTYHINLQLGDPAQAILVPRGGFFQITGG 358
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
W++++D+ GK A RR ++IGRQNPQYYEV EGL +GE+V+IS YE + ++E LIL
Sbjct: 359 RWMYIVDESGKFATRRPVKIGRQNPQYYEVTEGLSSGEKVIISGYELFGDNEKLIL 414
>gi|156108074|gb|EDO09819.1| hypothetical protein BACOVA_04196 [Bacteroides ovatus ATCC 8483]
Length = 415
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 199/415 (47%), Positives = 304/415 (73%), Gaps = 1/415 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MD +E+K GI +K L ++ G + L ++ + IF + AS++ V+ ++I V +F+D
Sbjct: 1 MDTLIERKPGINRKRLYWVGGVMLGLAVIAYFIFRDTASSMAVEKDRLTIATVEQAEFSD 60
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
++RV GQV P ++ + EGG V+E++ EEGA V+ GD+I+RLSN L++ I+ +EA+L
Sbjct: 61 YIRVIGQVMPSRIIYMDAIEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEADL 120
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
A ++N LRNT+++MEQ+RL+ K E++ L+ ++ +QR Y Q ++L +E+LIARED+ QA+
Sbjct: 121 AYQENELRNTRISMEQERLQLKQERIGLNKELIGKQRRYEQYKRLVNEQLIAREDYRQAE 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
E+Y +++ A+I ER+ QD I+R Q+ +++N+ NM+R++ L+RER ENL V++ IDG
Sbjct: 181 EEYIAAKEQLAVIDERIRQDHIFRESQIGSLDENIRNMKRSLALVRERLENLKVKAPIDG 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
++G L+ +GQ++S G+ IGQI SD K++A IDEHY++RV GL A F R GG ++L
Sbjct: 241 QVGNLNAQIGQSISAGEHIGQIIT-SDLKVQAQIDEHYVERVLPGLPADFTRDGGTYKLE 299
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
V K YPEV+DG+FRTD F ERP+NIR+GQTY+INLQLG P ++I++P+G FFQ TGG
Sbjct: 300 VTKPYPEVKDGQFRTDLNFISERPENIRAGQTYHINLQLGDPAQAILVPRGGFFQITGGR 359
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
W++V+D+ G A RR ++IGRQNP YYEV +GL GE+V+IS YE + ++E LIL
Sbjct: 360 WMYVVDESGTFATRRPVKIGRQNPLYYEVTDGLSPGEKVIISGYELFGDNEKLIL 414
>gi|154490029|ref|ZP_02030290.1| hypothetical protein PARMER_00258 [Parabacteroides merdae ATCC
43184]
gi|154089471|gb|EDN88515.1| hypothetical protein PARMER_00258 [Parabacteroides merdae ATCC
43184]
Length = 420
Score = 381 bits (978), Expect = e-104, Method: Composition-based stats.
Identities = 198/415 (47%), Positives = 314/415 (75%), Gaps = 1/415 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MD ++E+K +KKH+ ++G LL + W++F + +S+L+V+ I+I V +FND
Sbjct: 6 MDTRIERKSRFKKKHIYSLIGIAVGLLCLLWLLFRDTSSSLKVEKERITIATVQKGEFND 65
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
++RV GQV P ++ L EGG V+E+++EEGAQVR GD+I+RLSN L++ IL +EA+L
Sbjct: 66 YIRVIGQVLPDRIIYLDAIEGGRVEERLIEEGAQVRAGDVILRLSNPLLNIGILQSEADL 125
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
A ++N LRNT+++MEQ+ LR K +++ L ++ +++R +RQ E+LY + L+ARED+LQA+
Sbjct: 126 AYQENELRNTRLSMEQEHLRLKQDRIGLSKELVQKERRFRQYERLYKKNLLAREDYLQAE 185
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
EDYE + A++ ER+ QD ++RS Q+ +++N+ NM++++ L+R R ENL V++ +DG
Sbjct: 186 EDYEAALGQLAVVDERIKQDDLFRSSQLQSLDENIRNMKKSLALVRGRLENLKVKAPVDG 245
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
+LG L+ +GQ+++ G++IGQ+ + K+EA IDEHY++RV GL A+FER+G +++
Sbjct: 246 QLGNLEAQIGQSIAQGERIGQVIT-PELKVEAKIDEHYVERVMPGLPASFEREGKKYDME 304
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
V KVYPEVR+G+FRTD F RP+NIR+GQTY++NLQLG P ++I+P+G+F+Q++GG
Sbjct: 305 VTKVYPEVREGQFRTDLHFVSGRPENIRAGQTYHLNLQLGDPVPAVIVPRGSFYQASGGE 364
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
+++V+D++GK A RR +RIGRQNPQYYEV+EGL+ GE+V+IS Y+ + +E LIL
Sbjct: 365 YMYVVDEEGKTARRRPVRIGRQNPQYYEVVEGLQPGEKVIISGYDLFGENERLIL 419
>gi|53712886|ref|YP_098878.1| ABC transporter permease [Bacteroides fragilis YCH46]
gi|52215751|dbj|BAD48344.1| ABC transporter permease [Bacteroides fragilis YCH46]
Length = 415
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 200/415 (48%), Positives = 302/415 (72%), Gaps = 1/415 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MD +E+K G+++KH + G + + LV + IF + +S++ V+ ++I VT +F+D
Sbjct: 1 MDTMIERKPGMKRKHYYAVAGAVVLVGLVFYFIFRDTSSSMNVEKDRLTIATVTRGEFSD 60
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
++RV GQV P ++ + EGG V+E++ EEGA V+ GD+I+RLSN L++ I+ +EA+L
Sbjct: 61 YIRVIGQVMPNRIIYMDAIEGGRVEERLKEEGAIVKAGDVILRLSNPLLNIGIMQSEADL 120
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
A ++N LRNT+++MEQ+ LR K E++ L+ ++ +QR Y Q +L E+LIA+E+F A
Sbjct: 121 AYQENELRNTRISMEQEHLRLKQERIGLNKELAVKQRRYEQYSRLIKEQLIAQEEFRLAA 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
E+YE + + +I ER+ QD+ +R Q+ +++N+ NM+R++ L+RER ENL V++ IDG
Sbjct: 181 EEYEAARAQLEVIDERIRQDNFFRESQVHSLDENIRNMKRSLALVRERVENLKVKAPIDG 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
++G LD +GQ+++ G+ IGQI D K++A IDEHY++RV GL A F R GGN++L
Sbjct: 241 QVGNLDAQIGQSIAAGEHIGQIIT-PDLKVQAQIDEHYVERVVPGLPADFTRDGGNYKLE 299
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
V K YPEV++G+FRTD FT RP+NIR+GQTY+INLQLG P ++I++P+G FFQ TGG
Sbjct: 300 VTKPYPEVKEGQFRTDLQFTAGRPENIRAGQTYHINLQLGDPAQAILVPRGGFFQITGGR 359
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
W++V+D+ GK A RR IRIGRQNPQYYEV EGL+ G+RV+IS YE + ++E LIL
Sbjct: 360 WMYVVDESGKFATRRPIRIGRQNPQYYEVTEGLKPGDRVIISGYELFGDNEKLIL 414
>gi|60681104|ref|YP_211248.1| putative HlyD-family transporter component [Bacteroides fragilis
NCTC 9343]
gi|60492538|emb|CAH07309.1| putative HlyD-family transporter component [Bacteroides fragilis
NCTC 9343]
Length = 415
Score = 377 bits (967), Expect = e-103, Method: Composition-based stats.
Identities = 199/415 (47%), Positives = 301/415 (72%), Gaps = 1/415 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MD +E+K G+++KH + G + + LV + IF + +S++ V+ ++I VT +F+D
Sbjct: 1 MDTMIERKPGMKRKHYYAVAGAVVLVGLVFYFIFRDTSSSMNVEKDRLTIATVTRGEFSD 60
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
++RV GQV P ++ + EGG V+E++ EEGA V+ GD+I+RLSN L++ I+ +EA+L
Sbjct: 61 YIRVIGQVMPNRIIYMDAIEGGRVEERLKEEGAIVKAGDVILRLSNPLLNIGIMQSEADL 120
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
A ++N LRNT+++MEQ+ LR K E++ L+ ++ +QR Y Q +L E+LIA E+F A
Sbjct: 121 AYQENELRNTRISMEQEHLRLKQERIGLNKELAVKQRRYEQYSRLIKEQLIAEEEFRLAA 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
E+YE + + +I ER+ QD+ +R Q+ +++N+ NM+R++ L+RER ENL V++ IDG
Sbjct: 181 EEYEAARAQLEVIDERIRQDNFFRESQVHSLDENIRNMKRSLALVRERVENLKVKAPIDG 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
++G LD +GQ+++ G+ IGQI D K++A IDEHY++RV GL A F R GGN++L
Sbjct: 241 QVGNLDAQIGQSIAAGEHIGQIIT-PDLKVQAQIDEHYVERVVPGLPADFTRDGGNYKLE 299
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
V K YPEV++G+FRTD FT RP+NIR+GQTY+INLQLG P ++I++P+G FFQ TGG
Sbjct: 300 VTKPYPEVKEGQFRTDLQFTAGRPENIRAGQTYHINLQLGDPAQAILVPRGGFFQITGGR 359
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
W++V+D+ GK A RR IRIGRQNPQYYEV EGL+ G+RV++S YE + ++E LIL
Sbjct: 360 WMYVVDESGKFATRRPIRIGRQNPQYYEVTEGLKPGDRVIVSGYELFGDNEKLIL 414
>gi|124005830|ref|ZP_01690668.1| ABC transporter permease [Microscilla marina ATCC 23134]
gi|123988513|gb|EAY28154.1| ABC transporter permease [Microscilla marina ATCC 23134]
Length = 417
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 167/417 (40%), Positives = 262/417 (62%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MD ++KK+ KK G LLL+ + FGN ++ L V I+I V F +
Sbjct: 1 MDKVIQKKQWTLKKVFSLGGAGGLLLLLLIYSFFGNSSAKLNVSQGKITIASVQKANFQE 60
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
F+ VDG QPI V L EGG V++ VE+G QV++GD I++ +N+ L + +N E++L
Sbjct: 61 FIVVDGVAQPIKTVFLDIIEGGRVEKIFVEDGYQVKKGDSILKFTNTALQIDFMNRESQL 120
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
+ N + TQ+ M Q+ L+ E ++ + + +R +R+ +L K IA++ + +K
Sbjct: 121 LDMINERQTTQINMRQNELQTLNELADIEYRLKQAKRNHRRDSQLIKGKAIAKQVYFTSK 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
++Y+ Q+K L + Q+++ R+ +++Q++ ++ M+RN+ L + +NL V + I G
Sbjct: 181 DNYDYQQRKFELAKRSIKQNTMLRAERLNQLDASIQRMQRNIGLSQRTLDNLYVIAPISG 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
+L L +G++ SPG+ IGQI++L YKI IDEHYI +V GL TFE +G N+EL
Sbjct: 241 QLSTLKAEVGESKSPGENIGQIDNLDGYKINVGIDEHYISKVYTGLKGTFELEGKNYELV 300
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
V+KVYPEV+ G+F+ D F P IR GQT I LQL ++++IP+G F+Q+TGG
Sbjct: 301 VKKVYPEVQSGEFKVDMEFLKTIPAKIRRGQTLQIKLQLSSSQQAVLIPRGGFYQATGGG 360
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILILSK 417
WIFV++ +G KA +R I++GRQNP YYEV +GL+ GE+VV+SSYE Y+N + L+L K
Sbjct: 361 WIFVVNPNGDKAVKRNIKLGRQNPHYYEVTQGLKLGEKVVVSSYEGYENIDQLVLQK 417
>gi|86141783|ref|ZP_01060307.1| efflux transporter, MFP component, RND family protein
[Flavobacterium sp. MED217]
gi|85831346|gb|EAQ49802.1| efflux transporter, MFP component, RND family protein
[Leeuwenhoekiella blandensis MED217]
Length = 417
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 158/416 (37%), Positives = 253/416 (60%), Gaps = 2/416 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHAST-LRVDARGISIGHVTHEQFN 59
MDI LEKK+ K L IVG ++ + L+ ++I + L V ISI T F
Sbjct: 1 MDIPLEKKRFTTSKIL-MIVGAVSIVALILFVILSTTGNAKLNVQKERISIATATQGVFQ 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
+ + V+G V PIT + L EGG V+EK VE+GA +++G+ I+RLSN++L+L ++N E +
Sbjct: 60 ENIPVNGVVMPITTIYLDALEGGRVEEKFVEDGAIMKKGEPILRLSNTDLELSLVNQETQ 119
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQA 179
+ ++ +Q Q+ + + ++ + +R Y +KLYD+ IAR+D +++
Sbjct: 120 VYNLLTQMQISQNAARQNTINKLNQYTDVENSLIEAKRLYELNKKLYDKDAIARQDLIKS 179
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQID 239
+ DY +++ L + L QDSI + +Q+ + + + L+R + +L V++ +D
Sbjct: 180 QNDYNYQKERMQLAKQILEQDSIAVKQEKNQVSSSYQRTQNALELMRRKVADLVVKAPVD 239
Query: 240 GELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
G+L LD +GQ+ + G+++GQI+ LS YK+ IDEHYI R+ G +F+ G N+ L
Sbjct: 240 GQLTSLDAEIGQSKNKGERLGQIDVLSGYKVRVDIDEHYISRIYTGQTGSFDFDGKNYTL 299
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
++KVY +V +G+F+ D F E P+ IR GQT I + L Q ++++IPKG FFQ TGG
Sbjct: 300 VIKKVYTQVTNGRFQVDMEFESEVPEGIRRGQTLQIRVALSQEKQALLIPKGGFFQETGG 359
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
NWIF + +DG AY+ I +G QN +YYEVL GLE G+RV+ SSY++YK + L+L
Sbjct: 360 NWIFKVSEDGASAYKADISLGSQNTEYYEVLSGLEPGDRVITSSYDNYKEVQELVL 415
>gi|126648417|ref|ZP_01720904.1| ABC transporter permease [Algoriphagus sp. PR1]
gi|126575301|gb|EAZ79633.1| ABC transporter permease [Algoriphagus sp. PR1]
Length = 415
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 153/417 (36%), Positives = 254/417 (60%), Gaps = 3/417 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMI-FGNHASTLRVDARGISIGHVTHEQFN 59
MD +++KK +K + +I GG+ + + + I F +H ST+ V+ +S+ V +F
Sbjct: 1 MDRKIKKKTWTPRK-IAWIAGGVILVAGIIYQIGFADHRSTMNVEQDRLSVATVKTGEFT 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
D++ V GQ++P L EGG+V E V E GA V GD I+ ++NSNL L ++ E
Sbjct: 60 DYILVSGQIEPAQTFYLDAVEGGMVAEIVRESGALVDVGDTILMMANSNLQLDVMQRETM 119
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQA 179
L E+ N LR T++ ++Q+ L + + ++D I+ + Y++ ++L+++KL++ +F +
Sbjct: 120 LYEQINNLRQTRLFLDQNDLSQQGQLAEIDYQISLLEPQYKRFKELHEKKLVSDREFEEV 179
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQID 239
KE YE ++ L DSI RS Q+ Q+ + M ++ + NL +++ I
Sbjct: 180 KEQYEYNLKRKELTYASYRSDSIARSYQLQQLRQSENRMNASLDGVGNILNNLVIKAPIS 239
Query: 240 GELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
G+L + + +GQ ++ G++ GQI+ L ++K+ IDE Y+ R+ GL F G + EL
Sbjct: 240 GQLAMEQIEVGQAINSGERYGQIDVLDEFKVRVPIDELYLPRIGQGLKGKFTLSGVDHEL 299
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
+ K+YP + +G+F D FTGE P IR GQ+ I L+LG +S+++P G FF+ TGG
Sbjct: 300 EIMKIYPTITNGRFEVDMKFTGESPQGIRRGQSVRIRLELGDSEQSLLLPTGGFFKDTGG 359
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILILS 416
NW+FVL+ G A +R IR+GR+NP+YYEVLEGL GE+V++S YE++ ++EIL L+
Sbjct: 360 NWVFVLNSSG-NAEKRNIRLGRKNPEYYEVLEGLVEGEKVIVSGYENFGDNEILNLN 415
>gi|120435075|ref|YP_860761.1| HlyD family secretion protein [Gramella forsetii KT0803]
gi|117577225|emb|CAL65694.1| HlyD family secretion protein [Gramella forsetii KT0803]
Length = 416
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 152/417 (36%), Positives = 255/417 (61%), Gaps = 2/417 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHA-STLRVDARGISIGHVTHEQFN 59
MDI L+KK+ KK + I G + + L+ ++I + S L V+ I+I V + F
Sbjct: 1 MDIPLKKKRFTPKK-IAIIAGSVLIIALILFVILSSTGNSKLNVEKERITISEVKNGNFQ 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
+ + V+G V PI + L EGG V+EK VE+G +++G+ I+RLSN++L+L ++N E +
Sbjct: 60 ENIPVNGVVLPIKTIYLDAMEGGRVEEKFVEDGTMMKKGEPIIRLSNTDLELSLVNQETQ 119
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQA 179
+ ++ +Q Q+ + + ++ ++ +R Y +KLY++ + R+D++++
Sbjct: 120 VYNLLTQMQISQNAARQNTINKRNNFTDVENNLIEARRKYELNKKLYEKGAVGRQDYMES 179
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQID 239
+ +Y Q+KH L E L QDS+ + Q ++ R+ + L+R + +L V++ +D
Sbjct: 180 ENNYNYQQEKHQLAREVLEQDSLSSKQETQQARESYERTRKALELMRRKVGDLVVKAPVD 239
Query: 240 GELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
G+L LD +GQ+ G+++GQI+ +S YK+ A IDEHYI R+ G F G +EL
Sbjct: 240 GQLTALDAEIGQSKQKGERLGQIDVISGYKVRAEIDEHYISRIFNGQRGAFSFNGEEYEL 299
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
++KVY +V +G+F+ D F P+NIR GQ+ I L L Q E++++ KG FFQ TGG
Sbjct: 300 EIKKVYTQVSNGRFQVDMHFVEGVPENIRRGQSLQIKLALSQEKEAVLVSKGGFFQQTGG 359
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILILS 416
NWIF + +DG+ AY+ IR+G QN +YYEVLEG++ GE+V+ SSY ++ + E L+L+
Sbjct: 360 NWIFKVSEDGETAYKTPIRLGSQNTEYYEVLEGIKPGEQVITSSYSNFGDIEELVLN 416
>gi|88806509|ref|ZP_01122026.1| efflux transporter, MFP component, RND family protein
[Robiginitalea biformata HTCC2501]
gi|88783341|gb|EAR14513.1| efflux transporter, MFP component, RND family protein
[Robiginitalea biformata HTCC2501]
Length = 417
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 157/416 (37%), Positives = 252/416 (60%), Gaps = 2/416 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHA-STLRVDARGISIGHVTHEQFN 59
MDI +EKK+ +K + YI GGI + L+ +++ + L V ISI V F
Sbjct: 1 MDIPIEKKRFDSRK-IAYIAGGILLIALITYVVIATSGGAKLNVQTERISISTVQRGAFQ 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
+ + V+G V PIT + L EGG V+EK VE+GA +++G+ I+RLSN++L+L ++N E +
Sbjct: 60 ENIPVNGVVLPITTIYLDALEGGRVEEKFVEDGAMMQQGEPILRLSNTDLELSLVNQETQ 119
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQA 179
+ ++ +Q Q+ + + ++ + +R Y ++LY++ I R++ + A
Sbjct: 120 VYNLLTQMQISQNAARQNTINRLNQYTDVENSLIEARRLYELNKRLYEKDAIGRQELIIA 179
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQID 239
+ DY+ +++ L E L QDS+ S + Q+ ++ A + + L+R + +L VR+ ID
Sbjct: 180 ENDYKYQKERMELAEEILRQDSLSVSQEERQIANSYARTQNALELMRRKVADLVVRAPID 239
Query: 240 GELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
G+L LD +GQ+ G+++GQI+ LS +K+ A IDEHYI R+ G +F G L
Sbjct: 240 GQLTSLDAEIGQSKVKGERLGQIDVLSGFKVRADIDEHYISRIYTGQRGSFSFNGERHVL 299
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
++KVY +V +G+F+ D F GE P+ IR GQ+ I L L + E+++IPKG FFQ TGG
Sbjct: 300 EIKKVYTQVTNGRFQVDMEFAGEAPEGIRRGQSLQIRLALSEEKEALLIPKGGFFQKTGG 359
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
NWIF + + G AYR I +G QN +YYEVL GL+ G+RVV SSY++Y + + L+L
Sbjct: 360 NWIFKVSEGGGTAYRTDITLGSQNTEYYEVLSGLQPGDRVVTSSYDNYGDIQELVL 415
>gi|90019977|ref|YP_525804.1| ABC transporter permease [Saccharophagus degradans 2-40]
gi|89949577|gb|ABD79592.1| Secretion protein HlyD [Saccharophagus degradans 2-40]
Length = 434
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 148/390 (37%), Positives = 248/390 (63%), Gaps = 4/390 (1%)
Query: 27 LLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQE 86
+LV ++ + +L VD++ I+ G V+ F DF+ + +V P + L EGG V+
Sbjct: 46 VLVATLLSVSGGRSLNVDSQRIATGVVSKGSFEDFIPLRARVTPAKTLYLDAVEGGRVER 105
Query: 87 KVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKL 146
+VE+GAQ++ GD+IV LSN++L L +L+ EA++AE+ N +R+ ++++EQ+RL++K
Sbjct: 106 VLVEDGAQLQAGDLIVELSNASLQLSVLSNEAQVAEQLNNMRSIELSLEQNRLQHKRNLA 165
Query: 147 QLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSI 206
+D I R + ++KL + + +++ F + Q + L +E D+ +
Sbjct: 166 DIDYQIKMLTRQLQAEQKLLETQSLSQSQFDNTHDTLNWYQARKQLTLESQASDAKMQEA 225
Query: 207 QMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLS 266
Q+ +++ ++ ++ L R+ +N+NVR+ + G+L DV +GQ++ G+++GQI+ +
Sbjct: 226 QLIFLQETSERLQNSLALSRQNLDNMNVRAPVAGKLSGFDVEVGQSIGRGERLGQIDTPN 285
Query: 267 DYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDN 326
D+K+ ALID+ Y+ RV G A+FE +EL++ K+YP+V++G+F DF F GE+ N
Sbjct: 286 DFKLSALIDQFYLGRVDIGQRASFE----GYELTISKIYPQVQNGQFEVDFTFVGEQASN 341
Query: 327 IRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQY 386
IR GQT + L LG TE+++IP G F+Q TGGNWIFV+ +G A +R +R+GR+N Q+
Sbjct: 342 IRRGQTIQLKLVLGDATEALLIPNGAFYQDTGGNWIFVISPNGDHAIKRNVRLGRRNSQF 401
Query: 387 YEVLEGLEAGERVVISSYESYKNSEILILS 416
EVLEGLE GERVV S Y SY++ + L LS
Sbjct: 402 IEVLEGLEEGERVVTSPYSSYQDLQKLNLS 431
>gi|154491994|ref|ZP_02031620.1| hypothetical protein PARMER_01625 [Parabacteroides merdae ATCC
43184]
gi|154088235|gb|EDN87280.1| hypothetical protein PARMER_01625 [Parabacteroides merdae ATCC
43184]
Length = 416
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 140/409 (34%), Positives = 244/409 (59%), Gaps = 1/409 (0%)
Query: 8 KKGIRKKHLPYIVGGIAFLLLVGWM-IFGNHASTLRVDARGISIGHVTHEQFNDFVRVDG 66
KK + ++ +I GGIAF++L+ ++ I + LR DA + IG T ++F ++V V+G
Sbjct: 7 KKPVYYRYRWHIAGGIAFIVLLIYVGIAASGGRKLRTDAENLIIGEATSDKFLEYVDVEG 66
Query: 67 QVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNL 126
VQPI +Q++ E G V + EEG + +GD I+ L+N +L I + + E ++
Sbjct: 67 VVQPILTIQINTREAGSVDRIIAEEGTMMNKGDTILTLNNPDLIRAIEDQQDEWEKQLIS 126
Query: 127 LRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELV 186
+ ++ MEQ + + + LQ ++ R +++Y E+ ++ + ++ A+++++
Sbjct: 127 YQEKEIEMEQKSIDLQQKTLQTTYELNRLKKSYALDEEEFNMGVKSKAQLEVARDEFDYK 186
Query: 187 QQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLD 246
+ AL +E L DS ++ + M+++L R+ +RER E+L VR+ + G+L +
Sbjct: 187 TRSTALQLEGLRHDSAATILRRELMKNDLERERKKFERVRERMEDLVVRAPLSGQLSFVK 246
Query: 247 VVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYP 306
V GQ V + I +I L +KI + E+YIDR+ GL AT Q + L + KV P
Sbjct: 247 VTPGQQVQSTEAIAEIKVLDQFKIHTSLSEYYIDRITTGLPATITWQNKKYPLRITKVVP 306
Query: 307 EVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLD 366
EV+D F D VFT P+N+R G+++ + ++LGQP E+++IP+G FFQ+TGG WI+ L+
Sbjct: 307 EVKDRNFDVDLVFTEASPENVRIGKSFRVQIELGQPEEALVIPRGDFFQATGGQWIYKLN 366
Query: 367 KDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
+ G KA + + IGRQNPQ YE+ GL+ G++V+++ Y ++ ++E LIL
Sbjct: 367 ESGTKARKTPVSIGRQNPQQYEITGGLQPGDKVIVTGYSTFGDAEELIL 415
>gi|91218185|ref|ZP_01255133.1| efflux transporter, RND family, MFP subunit [Psychroflexus torquis
ATCC 700755]
gi|91183643|gb|EAS70038.1| efflux transporter, RND family, MFP subunit [Psychroflexus torquis
ATCC 700755]
Length = 416
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 149/416 (35%), Positives = 246/416 (59%), Gaps = 2/416 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHA-STLRVDARGISIGHVTHEQFN 59
MD+ L+KKK +K L I G +A + L+ ++I S L V+ ISI V F
Sbjct: 1 MDVPLKKKKFSNQK-LGLIGGVLAIIALILYVILQTSGGSKLNVETERISIHTVNKAIFQ 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
+ + V+G V PIT + L EGG V+EK VE+GA + +G I+RLSN++L+L ++N E
Sbjct: 60 ENIPVNGIVLPITTIYLDALEGGRVEEKFVEDGAILEQGQPILRLSNTDLELSLINQETS 119
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQA 179
+ ++ +Q Q+ + + + ++ + +R Y ++LYD I R D+ +
Sbjct: 120 VYNLLTQMQISQNAARQNTINRQNQFTDVENSLIEAKRVYNLNKRLYDNGAIGRMDYESS 179
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQID 239
++E +++ L L +D+I ++ +Q +++ + + L+R++ +L VR+ ID
Sbjct: 180 HNNFEYQKERMKLAKRVLSEDTISTQVENNQAKNSYIRTQSALELMRKKVGDLVVRAPID 239
Query: 240 GELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
G+L LD +GQ+++ G ++GQ++ YK+ IDEHYI R+ G TF N+ L
Sbjct: 240 GQLTSLDAEIGQSITKGTRLGQVDVTIGYKVRVDIDEHYISRIYNGQTGTFTLNNKNYTL 299
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
+++KV+ +V +G+F+ D F G+ P IR GQ I + L E++++ KG FFQ TGG
Sbjct: 300 TIKKVFTQVTNGRFQVDMKFEGDVPKGIRRGQNLQIRVALSAEKEALLVSKGGFFQKTGG 359
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
NWIF + ++G AY+ IR+G QN +YYEVLEGL G++VV SSY+S+ ++E LIL
Sbjct: 360 NWIFKISEEGSTAYKVNIRLGSQNTEYYEVLEGLNPGDKVVTSSYDSFGDTEELIL 415
>gi|71280414|ref|YP_271346.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
gi|71146154|gb|AAZ26627.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
Length = 431
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 142/389 (36%), Positives = 229/389 (58%), Gaps = 5/389 (1%)
Query: 26 LLLVGWMIFGNH-ASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIV 84
++ G+MI L VD + I VT F DF+ + G+V P V L EGG V
Sbjct: 44 VVFAGYMIASKSTGKVLSVDNSRVVISKVTSGVFEDFIPIRGRVTPAKTVYLDAIEGGRV 103
Query: 85 QEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTE 144
++ +VE+GA + G++IV LSN++L L +L E +AE+ N +R+ ++ +EQ+RL++K
Sbjct: 104 EKILVEDGASLTAGNLIVELSNASLQLSVLGNETRVAEQLNNMRSIELNLEQNRLQHKRN 163
Query: 145 KLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYR 204
+ + I R + + L I + ++ Q + AL IE D+ +
Sbjct: 164 IVDIKHQIKLLTRQVDRSQSLIATGAITKSKMEDTEDTLTWYQDRLALTIESQQSDARMQ 223
Query: 205 SIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQIND 264
Q+ + + N+ + R+ +N+NV++ + G+L +V +GQ+++ G+++GQI+
Sbjct: 224 GEQLTFLRYTSRRLESNLAISRQNLDNMNVKAPVAGKLSGFNVEVGQSIARGERLGQIDT 283
Query: 265 LSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERP 324
+DYK+ A IDE Y+ RV G AT++ N+ L + KVYP+V++G+F DF FT E+P
Sbjct: 284 PNDYKLTAFIDEFYLGRVDIGQTATYK----NYSLVIAKVYPQVQNGQFEVDFKFTSEQP 339
Query: 325 DNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNP 384
IR GQT I L LG +E+++IP G FFQ TGG W+FV+ +G +A +R +R+GR+N
Sbjct: 340 KGIRRGQTIQIKLTLGDASEALLIPNGAFFQDTGGKWMFVVSPNGSEAVKRNVRLGRRNN 399
Query: 385 QYYEVLEGLEAGERVVISSYESYKNSEIL 413
Q+ EV+EGLE GE+VV S Y SY+ + L
Sbjct: 400 QFIEVIEGLELGEQVVTSPYSSYQEMQRL 428
>gi|53713659|ref|YP_099651.1| probable ABC transporter permease [Bacteroides fragilis YCH46]
gi|60681932|ref|YP_212076.1| hypothetical protein BF2452 [Bacteroides fragilis NCTC 9343]
gi|52216524|dbj|BAD49117.1| probable ABC transporter permease [Bacteroides fragilis YCH46]
gi|60493366|emb|CAH08152.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
Length = 416
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 148/417 (35%), Positives = 240/417 (57%), Gaps = 4/417 (0%)
Query: 1 MDIQLEKKKG-IRKKHLPYIVGGIAFL-LLVGWMIFGNHASTLRVDARGISIGHVTHEQF 58
MDI++EKK IR K YI GGIAF+ LV +I LR+++ I I V ++F
Sbjct: 1 MDIKIEKKPWYIRYKF--YIAGGIAFVAFLVYVIILSAGPRKLRIESENIQIAEVKDDKF 58
Query: 59 NDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
++V V+G +QPI ++++ E G V+ + EEG+ +++GD I+ LSN +L I +
Sbjct: 59 MEYVDVEGLIQPILTIKVNTREAGSVERIIAEEGSLLQKGDTILTLSNPDLLRSIEDQRD 118
Query: 119 ELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQ 178
+ +++ + ++ MEQ L K + L+ + ++ R ++++ ++ + + ++
Sbjct: 119 DWEKQRITYQEKEIEMEQKSLSLKQQTLETNYELARLKKSFTLDKEEFRMGIKSKAQLEV 178
Query: 179 AKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQI 238
++++Y + L E L DS I+ D + ++ R+ ER NL V++ I
Sbjct: 179 SEDEYNYKVKNAELQREGLRHDSAVTIIRKDLIRTDMERERKKYERATERLGNLVVKAPI 238
Query: 239 DGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFE 298
G+L + V GQ V + I +I L YKI + E+YIDR+ GL AT QG +
Sbjct: 239 SGQLSFVKVTPGQQVGSSESIAEIKVLDQYKIHTSLSEYYIDRITTGLPATVNYQGKKYP 298
Query: 299 LSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTG 358
L + KV PEV+D F D VFTGE PDN+R G+++ + ++LGQP ++I+IP+G F+Q+TG
Sbjct: 299 LRITKVVPEVKDRMFDVDLVFTGEMPDNVRVGKSFRVQIELGQPEQAIVIPRGNFYQATG 358
Query: 359 GNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
G WI+ + KA R I IGRQNPQ YE+ GLE G+ VV + Y+++ +E LIL
Sbjct: 359 GQWIYKANASKTKAVRTPITIGRQNPQQYEITGGLEPGDYVVTTGYDTFGEAEELIL 415
>gi|29346268|ref|NP_809771.1| hypothetical protein BT_0858 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338163|gb|AAO75965.1| putative ABC transporter permease [Bacteroides thetaiotaomicron
VPI-5482]
Length = 416
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 148/417 (35%), Positives = 238/417 (57%), Gaps = 4/417 (0%)
Query: 1 MDIQLEKKKG-IRKKHLPYIVGGIAFL-LLVGWMIFGNHASTLRVDARGISIGHVTHEQF 58
MDI+LEKK IR ++ Y++GG+ F L+ ++ LR+DA I I V + F
Sbjct: 1 MDIKLEKKPWYIRYRY--YLIGGLLFAAFLIYVIVLSLGPRKLRIDAENIQIAEVKEDNF 58
Query: 59 NDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
++V V+G +QPI ++++ E G V+ V EEG+ + +GD I+ LSN +L I +
Sbjct: 59 MEYVDVEGLIQPILTIKINTREAGSVESIVGEEGSLLYQGDTIIVLSNPDLLRSIEDQRD 118
Query: 119 ELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQ 178
E ++ + ++ MEQ L K + L + ++ R +++ + + + ++
Sbjct: 119 EWEKQMITYQEQEIEMEQKSLNLKQQALTNNYELERLKKSIALDREEFQMGVKSKAQLQV 178
Query: 179 AKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQI 238
A+++Y + AL E L DS I+ + + ++ R+ ER NL V + I
Sbjct: 179 AEDEYNYKLKNAALQQESLRHDSAVTMIRKELIRNDRERERKKYERTHERLNNLVVTAPI 238
Query: 239 DGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFE 298
G+L + V GQ VS G+ I +I L YKI + E+YIDR+ GL AT QG +
Sbjct: 239 KGQLSFVRVTPGQQVSSGESIAEIKVLDQYKIHTSLSEYYIDRITTGLPATVNYQGKKYP 298
Query: 299 LSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTG 358
L + KV PEV+D F D VFTG+ PDN+R G+++ + ++LGQP ++IIP+G F+QSTG
Sbjct: 299 LKITKVVPEVKDRMFDVDLVFTGDMPDNVRVGKSFRVQIELGQPERALIIPRGNFYQSTG 358
Query: 359 GNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
G WI+ ++ KA R + IGRQNPQ YE+ EGL+ G+ V+ + Y+++ ++E LIL
Sbjct: 359 GQWIYKVNASKTKAIRVPLSIGRQNPQQYEITEGLQTGDWVITTGYDTFGDAEELIL 415
>gi|153806346|ref|ZP_01959014.1| hypothetical protein BACCAC_00605 [Bacteroides caccae ATCC 43185]
gi|149131023|gb|EDM22229.1| hypothetical protein BACCAC_00605 [Bacteroides caccae ATCC 43185]
Length = 416
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 148/417 (35%), Positives = 239/417 (57%), Gaps = 4/417 (0%)
Query: 1 MDIQLEKKKG-IRKKHLPYIVGGIAFL-LLVGWMIFGNHASTLRVDARGISIGHVTHEQF 58
MDI+LEKK IR ++ Y+ GG+ F+ L+ ++ LRVDA I I V F
Sbjct: 1 MDIKLEKKPWYIRYRY--YLTGGLLFISFLIYVIVLSLGPRKLRVDAENIQIAEVKDADF 58
Query: 59 NDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
++V V+G +QPI ++++ E G V+ V EEG+ +++GD I+ LSN +L I +
Sbjct: 59 MEYVDVEGLIQPILTIKVNTREAGSVESIVGEEGSLLQQGDTILILSNPDLLRNIEDQRD 118
Query: 119 ELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQ 178
E ++ + ++ MEQ L K + L + ++ R +++ + Y + ++
Sbjct: 119 EWEKQMITYQEQEIEMEQKSLNLKQQALTNNYELERLKKSIALDREEYQMGVKSKAQLQV 178
Query: 179 AKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQI 238
A+++Y Q+ AL E L DS I+ + + ++ R+ + ER NL V + I
Sbjct: 179 AEDEYNYKQKNAALQQESLRHDSAVTMIRKELIRNDRERERKKYERVHERLNNLVVTAPI 238
Query: 239 DGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFE 298
G+L + V GQ VS G+ I +I L YKI + E+YIDR+ GL AT QG +
Sbjct: 239 KGQLSFVKVTPGQQVSSGESIAEIKVLDQYKIHTSLSEYYIDRITTGLPATINYQGKKYP 298
Query: 299 LSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTG 358
L + KV PEV+D F D VFT + PDN+R G+++ + ++LGQP +++IIP+G F+Q+TG
Sbjct: 299 LRITKVVPEVKDRMFDVDLVFTDDMPDNVRVGKSFRVQIELGQPEQTLIIPRGNFYQATG 358
Query: 359 GNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
G WI+ ++ KA R + +GRQNPQ YE+ EGL G+ V+ + Y+++ ++E LIL
Sbjct: 359 GQWIYKVNASKTKAVRVPLSVGRQNPQQYEITEGLRPGDWVITTGYDTFGDAEELIL 415
>gi|150005683|ref|YP_001300427.1| hypothetical protein BVU_3173 [Bacteroides vulgatus ATCC 8482]
gi|149934107|gb|ABR40805.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 416
Score = 248 bits (632), Expect = 8e-64, Method: Composition-based stats.
Identities = 141/417 (33%), Positives = 249/417 (59%), Gaps = 4/417 (0%)
Query: 1 MDIQLEKKKG-IRKKHLPYIVGGIAFLLLVGWMI-FGNHASTLRVDARGISIGHVTHEQF 58
MDI++EKK IR ++ Y++ +AF++ + ++I LR++ I I V ++F
Sbjct: 1 MDIKIEKKPWYIRYRY--YMIAALAFIIFLIYVISLSLGPRKLRIETDNIQIAEVKDDKF 58
Query: 59 NDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
++V V+G VQPI ++++ E G V V EEG +++GD ++ L+N +L I +
Sbjct: 59 MEYVDVEGLVQPILTIKVNTREAGSVDRIVGEEGNMMKQGDTLLILTNPDLIRSIEDQRD 118
Query: 119 ELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQ 178
E +++ + ++ MEQ L K + LQ ++ R ++++ ++ + + ++ +
Sbjct: 119 EWEKQRITYKEKEIEMEQKSLTLKQQTLQAQYEMERLRKSFGLDKEEFKMGIKSKAELQV 178
Query: 179 AKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQI 238
++++Y+ + AL +E L DS I+ + ++++L + + ER E+L +++ I
Sbjct: 179 SEDEYKYKLKNTALQMESLKHDSSVTLIRKELLKNDLERESKKLKRAEERLEDLIIKAPI 238
Query: 239 DGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFE 298
G+L + V GQ V+ G+ I +I L YKI + E+YIDR+ GL AT QG +
Sbjct: 239 GGQLSFVKVTPGQQVASGESIAEIKVLDQYKIHTSLSEYYIDRITTGLPATVNYQGKRYP 298
Query: 299 LSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTG 358
L + KV PEV+D F D VFTGE P+N+R G+++ + ++LGQP ++I+IP+G F+QSTG
Sbjct: 299 LRITKVVPEVKDRMFDVDLVFTGEMPENVRVGKSFRVQIELGQPEQAIVIPRGNFYQSTG 358
Query: 359 GNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
G WI+ ++ KA + + IGRQNP YE+ EGL+ GE V+I+ Y+++ ++E LIL
Sbjct: 359 GQWIYKINPSKTKAVKVPLNIGRQNPLQYEITEGLQPGEFVIITGYDTFGDAEELIL 415
>gi|156110333|gb|EDO12078.1| hypothetical protein BACOVA_02583 [Bacteroides ovatus ATCC 8483]
Length = 416
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 149/419 (35%), Positives = 242/419 (57%), Gaps = 8/419 (1%)
Query: 1 MDIQLEKKKG-IRKKHLPYIVGGI---AFLLLVGWMIFGNHASTLRVDARGISIGHVTHE 56
MDI+LEKK IR ++ Y++GG+ AFL+ V + G LR+DA I I V
Sbjct: 1 MDIKLEKKPWYIRYRY--YLIGGLLFAAFLIYVITLSLG--PRKLRIDAENIQIAEVKES 56
Query: 57 QFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNA 116
F ++V V+G +QPI ++++ E G V+ V EEG+ +++GD I+ LSN +L I +
Sbjct: 57 DFMEYVDVEGLIQPILTIKINTRETGSVERIVGEEGSLLQQGDTILILSNPDLLRNIEDQ 116
Query: 117 EAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDF 176
E ++ + ++ MEQ L K + L ++ R +++ + + + ++
Sbjct: 117 RDEWEKQMITYQEQEIEMEQKSLNLKQQALTNSYELERLKKSIALDREEFQMGVKSKAQL 176
Query: 177 LQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRS 236
A+++Y Q+ AL E L DS I+ + + ++ R+ RER +L V +
Sbjct: 177 QVAEDEYCYKQKNAALQQESLRHDSAVTMIRKELIRNDRERERKKYERTRERLNSLVVTA 236
Query: 237 QIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN 296
+ G+L + V GQ VS G+ I +I L YKI + E+YIDR+ GL AT QG
Sbjct: 237 PLKGQLSFVKVTPGQQVSSGESIAEIKVLDQYKIHTSLSEYYIDRITTGLPATVNYQGNK 296
Query: 297 FELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQS 356
+ L + KV PEV+D F D +FTG+ PDN+R G+++ + ++LGQP +++IIP+G F+Q
Sbjct: 297 YPLKITKVVPEVKDRMFDIDLIFTGDMPDNVRVGKSFRVQIELGQPEQALIIPRGNFYQF 356
Query: 357 TGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
TGG WI+ ++ KA R + IGRQNPQ YE++EGL+ G+ V+ + Y+++ ++E LIL
Sbjct: 357 TGGQWIYKVNASKTKAVRVPLNIGRQNPQQYEIVEGLQPGDWVITTGYDTFGDAEELIL 415
>gi|149275740|ref|ZP_01881885.1| efflux transporter, MFP component, RND family protein [Pedobacter
sp. BAL39]
gi|149233168|gb|EDM38542.1| efflux transporter, MFP component, RND family protein [Pedobacter
sp. BAL39]
Length = 414
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 132/376 (35%), Positives = 224/376 (59%), Gaps = 2/376 (0%)
Query: 42 RVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDII 101
R D+ +++ V + F D V ++ V P+T V +S EGG V E E GA V +G +
Sbjct: 41 RADSDKVTVSTVQYGDFEDVVLLNASVVPLTSVIVSSPEGGTVAEIYTENGASVVKGTPL 100
Query: 102 VRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQ 161
+R+ N N ++E + E+ N LR ++ +EQ++ + + ++ + R Y+
Sbjct: 101 LRIINPNALSNYTSSETSITEQINQLRKLRLDLEQNQRMMSQDMMDIENSLRTASRKYKL 160
Query: 162 QEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRN 221
LY +K+I RE+F + +DYE + L+ + + ++ R +Q+ Q++ ++ M +
Sbjct: 161 DSTLYAKKVITREEFNTSSQDYEYYMGRRKLLKQAVVIENQGRVMQLKQIDISIGRMNES 220
Query: 222 VLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDR 281
+ IR+ EN+ +++ + G L D V G++ P + +G+I+ + YK++A +DE+YI+R
Sbjct: 221 LETIRQNIENMTIKAPVSGRLSSYDPVTGKSYGPNEMLGKIDVMQGYKLQAGVDEYYINR 280
Query: 282 VKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQ 341
VK G +A E G ++L+VRKV PEV G+F+ + VF G P +R G + I L L
Sbjct: 281 VKEGQSANCEFNGKTYQLTVRKVIPEVTSGQFQVELVFEGPSPQELRRGLSLQIKLTLSD 340
Query: 342 PTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
++S+++ +G FFQSTGG W+FV+ KDG KA RR ++IGR+N YYEVL GL+ GE V+
Sbjct: 341 NSKSLLVSQGQFFQSTGGTWVFVV-KDG-KATRRNVKIGRKNYLYYEVLAGLQKGEEVIT 398
Query: 402 SSYESYKNSEILILSK 417
SSY+ + +++ LSK
Sbjct: 399 SSYDQFSQYDVVELSK 414
>gi|88706289|ref|ZP_01103995.1| ABC transporter permease [gamma proteobacterium KT 71]
gi|88699440|gb|EAQ96553.1| ABC transporter permease [Congregibacter litoralis KT71]
Length = 426
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 131/388 (33%), Positives = 220/388 (56%), Gaps = 1/388 (0%)
Query: 31 WMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVE 90
W +++++ +D + I VT + D++ + V+P V L EGG V+ +VE
Sbjct: 39 WFATRDYSTSFTLDGQRIRTDTVTTGTYEDYIPLRAIVEPGRSVFLDAIEGGRVERLLVE 98
Query: 91 EGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDL 150
EGA V G +V LSN+ L L ++ EAE++E+ N LRNT++ +EQ+RL K + +++D
Sbjct: 99 EGATVAAGQPLVELSNTTLQLDVIAREAEVSEQLNNLRNTELAIEQNRLSLKGDLVEIDY 158
Query: 151 DITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQ 210
+TR R ++ +L ++ I+R ++ A ++ E ++ + + QD R QM Q
Sbjct: 159 QMTRLGRLVKRYTELEGKEFISRNEYENALDELEYWSKRREITLASQAQDERIRVAQMQQ 218
Query: 211 MEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKI 270
++ +++ + +N+ L R ENL + + G L D +G++ + G+++GQI+D+ +K
Sbjct: 219 LQASVSQLEQNLTLARANLENLLIVAPRSGLLSSFDAEIGESKARGERLGQIDDVDHFKA 278
Query: 271 EALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSG 330
AL++E Y++RV G A E G + L + K+YPEV +F D F + P NIR G
Sbjct: 279 SALVNEFYLNRVSVGQRARLELDGKAYTLELSKIYPEVSGAQFEVDLRFLDDTPGNIRRG 338
Query: 331 QTYYINLQLGQPTE-SIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEV 389
QT + L LG E + ++ G F TGG W+FVL D A RR +++GR+NP EV
Sbjct: 339 QTLQLRLMLGDTEEQATLVSNGAFLIDTGGAWVFVLSPDRSVATRRDVQLGRRNPNQIEV 398
Query: 390 LEGLEAGERVVISSYESYKNSEILILSK 417
+ GL G+ V+ SSY S+ N + L + +
Sbjct: 399 VSGLLPGDVVITSSYSSFINVDRLFIDR 426
>gi|71280743|ref|YP_270181.1| efflux transporter, RND family, MFP subunit subfamily [Colwellia
psychrerythraea 34H]
gi|71146483|gb|AAZ26956.1| efflux transporter, RND family, MFP subunit subfamily [Colwellia
psychrerythraea 34H]
Length = 421
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 125/378 (33%), Positives = 228/378 (60%), Gaps = 1/378 (0%)
Query: 40 TLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGD 99
T V+ + + + V F +F+ + G VQP + + +GG V+E V+EGA V++G
Sbjct: 43 TYNVEKQNLVLDTVKQSTFTEFLPLRGLVQPEETIFIDTIDGGRVEEVFVQEGALVKQGQ 102
Query: 100 IIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTY 159
I++LSN+NL L +L EAE++E+ N +RNT++ +EQ++L K + ++LD + R Q+ +
Sbjct: 103 AILKLSNTNLQLNVLAREAEVSEQINNMRNTRLALEQNQLSLKRDVIELDFSVLRLQKDF 162
Query: 160 RQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMR 219
+ + L ++K+I+++ F + +++ + + E +++I +S Q+ Q+E ++ ++
Sbjct: 163 NRHKALIEKKIISQQAFERVEDELAFQIKYRETVKESQEKEAILQSQQLAQLEQSIQTLQ 222
Query: 220 RNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYI 279
N+ + R + L +R+ G+L LD +G++ G+++GQ++ + YK+ A +DE Y+
Sbjct: 223 SNLAISRSSLDKLIIRAPKAGQLTFLDARVGESKRDGERLGQVDLIDQYKVSAQVDEFYV 282
Query: 280 DRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGER-PDNIRSGQTYYINLQ 338
RV G A+FE +++L V KVYP + +G F+ DF ++ +R GQ+ +
Sbjct: 283 SRVAKGQIASFESGQKSYQLIVSKVYPGINNGTFKVDFKLQSQQIAQTLRLGQSLQMKFN 342
Query: 339 LGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGER 398
L +++ G F QS+ G+W FV+D G A +R IR+GR+NPQ EV+ GL AG+R
Sbjct: 343 LSSSESKLLLANGGFIQSSAGSWAFVVDPSGATASKRTIRLGRKNPQSIEVISGLLAGDR 402
Query: 399 VVISSYESYKNSEILILS 416
V+ SSY S+ +++ L LS
Sbjct: 403 VITSSYASFADAQQLNLS 420
>gi|88860685|ref|ZP_01135322.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
gi|88817280|gb|EAR27098.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
Length = 418
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 125/379 (32%), Positives = 223/379 (58%), Gaps = 2/379 (0%)
Query: 36 NHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQV 95
N + + ++I V F D + + GQV P T + L GG V+E++VE+G V
Sbjct: 38 NSGRSQNIALTSLTISTVKQGAFKDALSLRGQVVPKTSIYLDSIAGGQVEERLVEQGEYV 97
Query: 96 RRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRR 155
+G +VRLSN++L L +++ EA++ E+ N LRNTQ+ ME +RL + + L++DL I+
Sbjct: 98 EQGQPLVRLSNTSLQLDVMSREAQVTEQLNFLRNTQMNMETNRLNLRRDLLEIDLQISHL 157
Query: 156 QRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNL 215
R +Q E L + ++A++ K+D Q + L +ER Q++ R +Q+ Q+ D+
Sbjct: 158 SRKLKQTEPLVSKGVVAQDTLDALKQDLSYYQARKELTLERQKQENSIREVQVAQLADSA 217
Query: 216 ANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALID 275
+ +N+ R+ +NL V++ + G L LDV +G++ + G ++GQI+ ++YK+ +D
Sbjct: 218 KMLEKNLQFARDNLDNLLVKAPVAGYLSELDVEIGESKNRGARLGQIDIPNEYKLVVRLD 277
Query: 276 EHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYI 335
E Y+++V+ +A E +G E V K+ V+ +F+ + V ++ GQ+ +
Sbjct: 278 EFYLNQVQRDMAVMVELEGSIVEAKVSKIDSRVQQSQFQIE-VDLPTNTKGVKRGQSIDV 336
Query: 336 NLQLG-QPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLE 394
L LG ++++ +G FF ++GGNW +VL++ KA RR IR+G++N Y+EVL GL+
Sbjct: 337 ELMLGDNKNNALLLSRGAFFTNSGGNWAYVLEQGSDKAVRRDIRLGKKNQDYFEVLAGLQ 396
Query: 395 AGERVVISSYESYKNSEIL 413
G++VV SSY ++ ++ L
Sbjct: 397 VGDKVVTSSYSNFDKADQL 415
>gi|146299091|ref|YP_001193682.1| efflux transporter, RND family, MFP subunit [Flavobacterium
johnsoniae UW101]
gi|146153509|gb|ABQ04363.1| efflux transporter, RND family, MFP subunit [Flavobacterium
johnsoniae UW101]
Length = 412
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 126/404 (31%), Positives = 218/404 (53%), Gaps = 4/404 (0%)
Query: 12 RKKHLPYIVGGIAFLLLVGWMIFG--NHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQ 69
+ + Y+ I L + ++F N +L V A +S+ V F DFV +V+
Sbjct: 8 KNRKFRYLTIAIGVFLALAVIVFFSFNSKRSLNVKADELSVQKVEKAFFEDFVVFQAKVE 67
Query: 70 PITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRN 129
P+ V+ ++ EGG V+E VE GA V +G + RL N N +L L E + E+ N L
Sbjct: 68 PLNVMLVNVTEGGSVKEIFVENGATVTKGQSLARLYNPNTELNYLTQETAIIEQINNLNT 127
Query: 130 TQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQK 189
++ + L + + ++ D +R Y KL+ + +I++ D+ KE +++
Sbjct: 128 GKLNIRNQELNLTKDLVLIEHDYNDAKRLYDVNAKLFAKDVISKNDWNTFKESLRFQEER 187
Query: 190 HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVL 249
I + + ++ +Q+ Q+ ++ M +++ ++R K+N + + G L + VL
Sbjct: 188 RKTIQQSIQKEKQSNQLQISQINRSIQTMEKSLDILRNNKKNFLITAPESGRLTSFEPVL 247
Query: 250 GQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVR 309
G+ G+ IG+I+ YK+ A +DE Y+++++ GL E +G E+ V KV PEV+
Sbjct: 248 GKTFQAGESIGRIDSKQGYKLSANVDEFYLEKIREGLKGQVEFKGKTLEVVVTKVIPEVK 307
Query: 310 DGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDG 369
+G F + FT + ++ G ++ + L L + + +++ KG+F Q T G WIFV+ G
Sbjct: 308 NGHFIVELAFTSKENIVLQDGLSFGVKLILSEKNKILVVQKGSFNQETAGKWIFVV--KG 365
Query: 370 KKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEIL 413
KA +R I++GR+NP YYEVL+GL+ GE VVISSY YK+ E L
Sbjct: 366 NKAEKRNIKLGRENPSYYEVLDGLKEGESVVISSYSDYKDIEEL 409
>gi|77978814|ref|ZP_00834238.1| COG0845: Membrane-fusion protein [Yersinia intermedia ATCC 29909]
Length = 420
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 105/417 (25%), Positives = 196/417 (47%), Gaps = 4/417 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHAS--TLRVDARGISIGHVTHEQF 58
MDI++EK + I+G L+ + I+ S TL V V E+F
Sbjct: 1 MDIKIEKNAYTNLRIKLIIIGVSLILIACCFYIYSLFTSQNTLLVARENTIFITVKPEEF 60
Query: 59 NDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
D + P +S E GG V E + V +GD+IVRLSN + L+ + A
Sbjct: 61 QDVLITRAITVPKESTIISSERGGKVIEIAKKAFEAVNKGDVIVRLSNYDFMLETTSRMA 120
Query: 119 ELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQ 178
++ E+ N LRN ++ +EQD K + I + + + L + +IA+ +
Sbjct: 121 DITEQINNLRNMKMQLEQDNRDTKLNLQEAQHQIEVVSKNLIRHQVLDTKSMIAKSELEN 180
Query: 179 AKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQI 238
K+ + + K +++E +++ Q++ + D++ + R + +I + L + + I
Sbjct: 181 QKDILKNWKTKREILLEHNNKNQKSLPKQLNNINDSILLLERMMGMIETGIDQLVITAPI 240
Query: 239 DGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFE 298
DG L +LD+ LGQ + PG+KI +++ + Y + E+Y+D++K + G +
Sbjct: 241 DGSLSVLDIELGQQIKPGEKIAVVDNFNSYYFNVFLSEYYLDKIKPQTRVIAKINGQDIG 300
Query: 299 LSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQST- 357
L + V + +GKF+ T ++ GQ+ I + L E I++ S
Sbjct: 301 LLIESVSTVIDNGKFKAKLTPTQLNKFPLKRGQSIEIEISLQDEKEKILLVPNESITSDK 360
Query: 358 -GGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEIL 413
GGN++++ + A + K+ I R+N + E+ GL +G+R++I SY + I+
Sbjct: 361 YGGNYLYIYQQKHDHAIKTKVEIKRRNAEKTEITAGLNSGQRIIIPSYSNSNEYNII 417
>gi|51595851|ref|YP_070042.1| hypothetical protein YPTB1514 [Yersinia pseudotuberculosis IP
32953]
gi|51589133|emb|CAH20753.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
Length = 420
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 112/423 (26%), Positives = 202/423 (47%), Gaps = 16/423 (3%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFG--NHASTLRVDARGISIGHVTHEQF 58
MDI+LEKK I + I+ + L L + I+ S L V E +
Sbjct: 1 MDIKLEKKININSREKIVILSVLLILFLSCFFIYYLFTKESALLVPRERAIFYTAQFEPY 60
Query: 59 NDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
D + P V LS E GG + E V + V +GD+I RLSN + L+ + A
Sbjct: 61 QDVLVTRAITVPNESVILSSERGGKIIEIVKQSAENVIKGDVIARLSNYDFTLEATSRMA 120
Query: 119 ELAEKQNLLRNTQVTMEQD----RLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIARE 174
++ E+ N LRN ++ +EQD +L + + Q+D+ I++ + Y K+ DEKL+ +
Sbjct: 121 DIMEQINSLRNMRMRLEQDSRDTQLSLQEAQHQIDI-ISKDLKRY----KVLDEKLLIAK 175
Query: 175 DFLQAKEDYELVQQKHALIIERLHQDSIYRSI--QMDQMEDNLANMRRNVLLIRERKENL 232
L+ + D L+ K I + H +S Q +++++ + + + +I E L
Sbjct: 176 SELERQAD-RLINWKTKSNILQKHNSRNQKSFPSQFKNIDESIILLEKMMKMIEVGIEQL 234
Query: 233 NVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFER 292
+ + IDG L +LD+ LGQ + G+KI I++L+ Y E+YID++K +
Sbjct: 235 VIIAPIDGTLSVLDIELGQQIKSGEKISVIDNLNSYYFNVYFSEYYIDKIKPNTQIIAQI 294
Query: 293 QGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIII--PK 350
G + +L + V V +GKF+ +++ GQ+ I + L + +++ +
Sbjct: 295 NGQDTQLLIESVSAIVDNGKFKAKLRPIESGIAHLKRGQSIEIRIALQEENNHVLLVPTE 354
Query: 351 GTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
F S G ++I++ +A + K+ + R+N E+ GL+ +R+V +S K +
Sbjct: 355 SVFSNSNGDHFIYIYQDKYDRAIKTKVEVKRRNSIKTEITSGLQPSQRIVKMPDDSDKTA 414
Query: 411 EIL 413
I+
Sbjct: 415 NII 417
>gi|153948431|ref|YP_001401446.1| efflux transporter, RND family, MFP subunit [Yersinia
pseudotuberculosis IP 31758]
gi|152959926|gb|ABS47387.1| efflux transporter, RND family, MFP subunit [Yersinia
pseudotuberculosis IP 31758]
Length = 420
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 111/423 (26%), Positives = 201/423 (47%), Gaps = 16/423 (3%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFG--NHASTLRVDARGISIGHVTHEQF 58
MDI+LEKK I + I+ + L L + I+ S L V E +
Sbjct: 1 MDIKLEKKININSREKIVIIFVLLILFLSCFFIYYLFTKESALLVPRERAIFYTAQFEPY 60
Query: 59 NDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
D + P V LS E GG + E V + V +GD+I RLSN + L+ + A
Sbjct: 61 QDVLVTRAITVPNESVILSSERGGKIIEIVKQSAENVIKGDVIARLSNYDFTLEATSRMA 120
Query: 119 ELAEKQNLLRNTQVTMEQD----RLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIARE 174
++ E+ N LRN ++ +EQD +L + + Q+D+ I++ R Y K+ D+K + +
Sbjct: 121 DIMEQINSLRNMRMRLEQDSRDTQLSLQEAQHQIDI-ISKDLRRY----KILDKKFLIAK 175
Query: 175 DFLQAKEDYELVQQKHALIIERLHQDSIYRSI--QMDQMEDNLANMRRNVLLIRERKENL 232
L+ + D L+ K I + H +S Q +++++ + + + +I E L
Sbjct: 176 SELERQAD-RLINWKVKSDILQKHNSRNKKSFPSQFKNIDESIILLEKMMKMIEVGIEQL 234
Query: 233 NVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFER 292
+ + IDG L +LD+ LGQ + G+KI I++L+ Y E+YID++K +
Sbjct: 235 VIIAPIDGTLSVLDIELGQQIKSGEKISVIDNLNSYYFNVYFSEYYIDKIKPNTQIIAQI 294
Query: 293 QGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIII--PK 350
G + +L + V V +GKF+ +++ GQ+ I + L + +++ +
Sbjct: 295 NGQDTQLLIESVSAIVDNGKFKAKLRPIESGIAHLKRGQSIEIRIALQEENNHVLLVPTE 354
Query: 351 GTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
F S G ++I++ +A + K+ + R+N E+ GL+ +R+V +S K +
Sbjct: 355 SVFSNSNGDHFIYIYQDKYDRAIKTKVEVKRRNSIKTEITSGLQPSQRIVKMPDDSDKTA 414
Query: 411 EIL 413
I+
Sbjct: 415 NII 417
>gi|16121771|ref|NP_405084.1| hypothetical protein YPO1498 [Yersinia pestis CO92]
gi|22126549|ref|NP_669972.1| hypothetical protein y2670 [Yersinia pestis KIM]
gi|45441213|ref|NP_992752.1| hypothetical protein YP_1388 [Yersinia pestis biovar Microtus str.
91001]
gi|108806791|ref|YP_650707.1| hypothetical protein YPA_0794 [Yersinia pestis Antiqua]
gi|108812641|ref|YP_648408.1| hypothetical protein YPN_2480 [Yersinia pestis Nepal516]
gi|145598762|ref|YP_001162838.1| hypothetical protein YPDSF_1478 [Yersinia pestis Pestoides F]
gi|149366419|ref|ZP_01888453.1| putative exported protein [Yersinia pestis CA88-4125]
gi|21959551|gb|AAM86223.1|AE013869_8 hypothetical [Yersinia pestis KIM]
gi|45436073|gb|AAS61629.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|108776289|gb|ABG18808.1| hypothetical protein YPN_2480 [Yersinia pestis Nepal516]
gi|108778704|gb|ABG12762.1| hypothetical protein YPA_0794 [Yersinia pestis Antiqua]
gi|115347250|emb|CAL20144.1| putative exported protein [Yersinia pestis CO92]
gi|145210458|gb|ABP39865.1| hypothetical protein YPDSF_1478 [Yersinia pestis Pestoides F]
gi|149290793|gb|EDM40868.1| putative exported protein [Yersinia pestis CA88-4125]
Length = 420
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 96/366 (26%), Positives = 180/366 (49%), Gaps = 14/366 (3%)
Query: 56 EQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILN 115
E + D + P V LS E GG + E V + V +GD+I RLSN + L+ +
Sbjct: 58 EPYQDVLVTRAITVPNESVILSSERGGKIIEIVKQSAENVIKGDVIARLSNYDFTLEATS 117
Query: 116 AEAELAEKQNLLRNTQVTMEQD----RLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLI 171
A++ E+ N LRN ++ +EQD +L + + Q+D+ I++ R Y K+ D+K +
Sbjct: 118 RMADIMEQINSLRNMRMRLEQDSRDTQLSLQEAQHQIDI-ISKDLRRY----KILDKKFL 172
Query: 172 AREDFLQAKEDYELVQQKHALIIERLHQDSIYRSI--QMDQMEDNLANMRRNVLLIRERK 229
+ L+ + D L+ K I + H +S Q +++++ + + + +I
Sbjct: 173 IAKSELERQAD-RLINWKVKSDILQKHNSRNQKSFPSQFKNIDESIILLEKMMKMIEVGI 231
Query: 230 ENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAAT 289
E L + + IDG L +LD+ LGQ + G+KI I++L+ Y E+YID++K
Sbjct: 232 EQLVIIAPIDGTLSVLDIELGQQIKSGEKISVIDNLNSYYFNVYFSEYYIDKIKPNTQII 291
Query: 290 FERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIII- 348
+ G + +L + V V +GKF+ +++ GQ+ I + L + +++
Sbjct: 292 AQINGQDTQLLIESVSAIVDNGKFKAKLRPIESGIAHLKRGQSIEIRIALQEENNHVLLV 351
Query: 349 -PKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESY 407
+ F S G ++I++ +A + K+ + R+N E+ GL+ +R+V +S
Sbjct: 352 PTESVFSNSNGDHFIYIYQDKYDRAIKTKVEVKRRNSIKTEITSGLQPSQRIVKMPDDSD 411
Query: 408 KNSEIL 413
K + I+
Sbjct: 412 KTANII 417
>gi|123443039|ref|YP_001007013.1| hypothetical protein YE2824 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090000|emb|CAL12857.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 420
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 100/411 (24%), Positives = 188/411 (45%), Gaps = 18/411 (4%)
Query: 1 MDIQLE--KKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGH-VTHEQ 57
MDI +E K K I K + + V +A + + ++ + + A + +R ++ H + E
Sbjct: 1 MDINIEQRKNKNITAKIIIFFVL-LAVIACLYYIYYLSTAQRSLLISRENTVFHTIESEV 59
Query: 58 FNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAE 117
+ + + P + +S E GG V E + V +GD+I+RLSN + L+ +
Sbjct: 60 YQEVLTTRAIAVPKESIIVSSERGGKVTEVAKQAFDTVAKGDVIIRLSNYDFMLEATSRI 119
Query: 118 AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
+ E+ N LRN ++ +EQD K + IT + + + L + +IA+ +
Sbjct: 120 VNITEQINNLRNMKIQLEQDNRETKLNLQEAQHQITTISKDLARHQVLDMKSMIAKSELE 179
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
+ + K ++ E +++ Q ++D++ + + +I E L + +
Sbjct: 180 NQVGMLKNWKIKSEILKEHDNKNKKSFPTQFKSIDDSILLLEGMMDIIENGMEQLVITAP 239
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNF 297
IDG L +LDV GQ + PG+KI I++L Y E+Y++++K G
Sbjct: 240 IDGVLSILDVEPGQQIKPGEKIAIIDNLQSYYFNVYFSEYYLNKIKPQSQILATINGQET 299
Query: 298 ELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQ--------PTESIIIP 349
L + V V +GKF+ + ++ GQ+ I + L + PT+SII
Sbjct: 300 PLLIESVSTIVENGKFKAKLMPLHASTTLLKRGQSIEIKIPLQEENNAVLMAPTDSII-- 357
Query: 350 KGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
F G ++I++ + A + KI I R+NP E+ G++ GE ++
Sbjct: 358 ----FDDNGNSFIYIYHPEDDFAIKSKIEIKRRNPMKTEITAGIKVGEIII 404
>gi|109898555|ref|YP_661810.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
atlantica T6c]
gi|109700836|gb|ABG40756.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
atlantica T6c]
Length = 421
Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 107/418 (25%), Positives = 193/418 (46%), Gaps = 42/418 (10%)
Query: 24 AFLLLVGWMIFGNHAST-LRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQL-SPEEG 81
A L+ V W N +S + R + + VT + F + V G+V +L SP +G
Sbjct: 22 AALIYVFWSTVRNWSSADTSLSMRNVRVATVTVKDFVRDLSVQGRVVAAVSPRLYSPAQG 81
Query: 82 GIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRN 141
I E V+ G +V +G ++ + + L Q+ E+ L + +E DR R
Sbjct: 82 TITFE--VDAGDKVMKGQLLATIESPELTNQLKQEESSLQRNK---------LELDRQRI 130
Query: 142 KTEKLQLD---------LDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ--KH 190
+ +KL L+ + +R R+ + Y I++ DF +A++D + Q KH
Sbjct: 131 QGKKLALEKQKAADLAKVATVAAEREKRRADNAYATHAISQIDFEKAQDDLKNAQLVLKH 190
Query: 191 ALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERK---ENLNVRSQIDGELGLLDV 247
AL L Q+S+ ++ Q+ ++R L + E K + L VRS +DG +G L V
Sbjct: 191 ALQDASLDQESLDFELKTQQLL-----VQRQALQVSETKRQVDQLQVRSPVDGIVGNLAV 245
Query: 248 VLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPE 307
VS Q I + DLS+++++ I E Y D + G+ A + + + PE
Sbjct: 246 QQKNQVSKNQPILSVVDLSEFELDVDIPESYADDLAIGMDAQVSLNSQQYAAVLVTISPE 305
Query: 308 VRDGKFRTDFVFTGE--------RPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
+ + + F E +P+ +R Q + + + + +P+G F QS G
Sbjct: 306 IENNQVAGRVRFAKENHQGEALKQPEGLRQNQRLSTRILMENKSSVLTLPRGQFLQSDNG 365
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILILSK 417
+ +V+ + A R+ I IG ++ E+L GL G++V+ISS ++ +E ++L++
Sbjct: 366 RFAYVIKDN--MALRQPITIGARSLSEVEILAGLTEGDQVIISSTDALDGAESVLLAR 421
>gi|21244363|ref|NP_643945.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
gi|21110020|gb|AAM38481.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
Length = 423
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 97/399 (24%), Positives = 177/399 (44%), Gaps = 18/399 (4%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
+ +A L +GW + A + DA + I VT + DG+V L
Sbjct: 29 IATVAVLAGIGWAVTAWSAGSRSFDASRVRIATVTQGDLVRDIAADGRVIAANSPVLYAI 88
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA--EKQNLLRNTQVTMEQD 137
G V VV G V++G + R+ + L ++ +A LA E ++ T+ +
Sbjct: 89 SAGTVTLSVVA-GDVVKQGQELARIDSPELRSKLAQEQATLAGLEAESSRAALDATLARA 147
Query: 138 RLRNKTEKLQLD-----LDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
T++ Q+D D+ R QR + E A++ + D + Q+ AL
Sbjct: 148 NASKLTDQAQIDKQAAARDLERYQRGFDGGAVPQVELAKAQDTLKKTDIDLQHAQRDAAL 207
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQN 252
+ DS + + D+ +A ++R V + L +RS DG++G + V
Sbjct: 208 KSQGADLDSRNKRLLADRQRAVVAEVQRQV-------DALTLRSPFDGQVGQVQAVQHTQ 260
Query: 253 VSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN-FELSVRKVYPEVRDG 311
V+ I + DLS +++E + E + + G+ A G F +V V PEV +G
Sbjct: 261 VAANAPILGVVDLSKFEVEIKVPESFARDLAIGMPAQLTSGSGEPFAGAVSAVSPEVVNG 320
Query: 312 KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKK 371
+ FT ++P +R Q + + + + +G F + +GG++ +V+ DG
Sbjct: 321 EVTARIRFTDKQPPGLRQSQRMSARVLMDTRRNVLKVERGPFLEQSGGSYAYVM--DGNT 378
Query: 372 AYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
A RR +R+G + +VL GL+ G+RVV+S +++ ++
Sbjct: 379 AVRRPVRMGVSSLGEVQVLSGLQVGDRVVVSGADNFGDA 417
>gi|113949004|ref|ZP_01434658.1| Secretion protein HlyD [Shewanella baltica OS195]
gi|113908612|gb|EAU27263.1| Secretion protein HlyD [Shewanella baltica OS195]
Length = 435
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 106/410 (25%), Positives = 191/410 (46%), Gaps = 22/410 (5%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP ++GG A L+ + W G + + + I+ + V G++
Sbjct: 33 KRLKLPLLIGGCALLVSALVWASLGTDSVSKSLSRSDITTAKLFVGTLTRDVATTGKIVA 92
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V +GD++ +L + L Q+ AE+ LA Q+ L
Sbjct: 93 ANAPILYSTEEGTVT-LLSNPGDSVNKGDVVAKLDSPRLTNQLEQAESILAGMQSALERA 151
Query: 131 QVTMEQDRLR-NKT-EKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ 188
++ +D+L+ N+T + +DL+ R+R R+ E L KLI+ D+ + K+D +
Sbjct: 152 KLDARRDQLQVNQTLDMAAVDLEAADRER--RRGELLIKNKLISEIDYEKGKDDLHKAKL 209
Query: 189 K--HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE---RKENLNVRSQIDGELG 243
K HA L +D++ I+ +E + R +L + E + E LN+++ + G +G
Sbjct: 210 KFAHAEQEVALTKDTLTFEIKNKALE-----VERQILAVHELERQVEALNIKAPVGGIIG 264
Query: 244 LLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SV 301
+S Q I + DLS Y+ E + E Y D + GL E G+ +L +
Sbjct: 265 NWITEQKTRLSANQPILTVVDLSAYEAELAVPESYADDL--GLGMEVELSFGSVKLMGKL 322
Query: 302 RKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNW 361
+ PEVR+ + F + +R Q + L + +++ +G F S GG+
Sbjct: 323 SSISPEVRNREVTARVQFVQDNSLKLRQNQRISARVLLEHRPDVLMVKRGAFMTSGGGDE 382
Query: 362 IFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
++ + +G A RR I++G + EVL+G +AG+ V SS E + ++E
Sbjct: 383 VYQI--EGDLASRRAIKLGSTSLSQVEVLDGGKAGDEWVTSSVEPFNHAE 430
>gi|78049311|ref|YP_365486.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78037741|emb|CAJ25486.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 423
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 96/399 (24%), Positives = 175/399 (43%), Gaps = 18/399 (4%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
V + L +GW + A + DA + I VT + DG+V L
Sbjct: 29 VAAVTVLAGIGWAVTAWSAGSRSFDASRVRIATVTRGDLVRDIAADGRVIAANSPVLYAI 88
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA--EKQNLLRNTQVTMEQD 137
G V VV G V++G + R+ + L ++ +A LA E ++ T+ +
Sbjct: 89 SAGTVTLSVVA-GDVVKQGQELARIDSPELRSKLAQEQATLAGLEAESSRAALDATLARA 147
Query: 138 RLRNKTEKLQLD-----LDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
T++ Q+D D+ R QR Y E A++ + D + Q+ AL
Sbjct: 148 NASKLTDQAQIDKQAAARDLERYQRGYDGGAVPQVELAKAQDTLKKTDIDLQHAQRDAAL 207
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQN 252
+ DS + + D+ +A ++R V + L +RS DG++G + V
Sbjct: 208 KSQGADLDSRNKRLLADRQRAVVAEVQRQV-------DALTLRSPFDGQVGQVQAVQHTQ 260
Query: 253 VSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN-FELSVRKVYPEVRDG 311
V+ I + DLS +++E + E + + G+ A G F ++ V PEV +G
Sbjct: 261 VAANAPILGVVDLSKFEVEIKVPESFARDLAIGMPAQLTSGSGQPFAGAISAVSPEVVNG 320
Query: 312 KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKK 371
+ FT ++P +R Q + + + + +G F + +GG++ +V+ DG
Sbjct: 321 EVTARIRFTDKQPPGLRQSQRMSARVLMDTRRNVLKVERGPFVEQSGGSYAYVM--DGNT 378
Query: 372 AYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
A RR + +G + +VL GL+ G+RVV+S +++ ++
Sbjct: 379 AARRPVTLGVSSLGEVQVLSGLQVGDRVVVSGADNFGDA 417
>gi|85711130|ref|ZP_01042190.1| ABC transporter permease [Idiomarina baltica OS145]
gi|85695043|gb|EAQ32981.1| ABC transporter permease [Idiomarina baltica OS145]
Length = 423
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 91/381 (23%), Positives = 186/381 (48%), Gaps = 15/381 (3%)
Query: 43 VDARGISIGHVTHEQFNDFVRVDGQV-QPITVVQLSPEEGGIVQEKVVEEGAQVRRGDII 101
V++ + V F V + G+V ++ +P EG I V G V +G +
Sbjct: 52 VESSELRYATVEQGNFTRDVSIQGKVVAAVSPTLYAPAEGVITYH--VGAGDAVEQGQAL 109
Query: 102 VRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQ 161
+ + L ++ +A LA + L ++ ++ L N+ + +T R R+
Sbjct: 110 ATIESPELKSKLEQEQASLASLKMELDRQRINSKKAALENQKLVDLAHVTLTAADREKRR 169
Query: 162 QEKLYDEKLIAREDFLQAKEDYELVQ--QKHALIIERLHQDSIYRSIQMDQMEDNLANMR 219
++ ++++ I+ D+ +A+++ + Q KHA+ +L+ +S+ IQ Q++ +
Sbjct: 170 ADRAWEKQAISEIDYEKAQDELDNAQVVYKHAVQDAKLNSESLAFDIQSLQLK-----VD 224
Query: 220 RNVLLIRERK---ENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDE 276
R LL+ E + + L + S ++G +G L+V V+ Q + + DLS++++E I E
Sbjct: 225 RQQLLVNELQRQVDGLTIASPVNGIVGNLEVDQKNQVAKNQAVLGVVDLSEFEVELGIPE 284
Query: 277 HYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYIN 336
Y D + G+AA G + ++ V PE+R+ + F+ + P +R Q
Sbjct: 285 SYADDLAIGMAAEINYNGQLHKATLVAVSPEIRNNEVIGTLRFSEDTPAGLRQNQRLTSR 344
Query: 337 LQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAG 396
+ L Q + + + +G F Q+ GG +V+ DG A + I+ G + E++ GL+ G
Sbjct: 345 IILDQKDDVMTLQRGPFLQNQGGRVAYVV-SDG-IALKTPIQTGASSLSKVEIISGLKVG 402
Query: 397 ERVVISSYESYKNSEILILSK 417
+RV+IS +S+ +E +++++
Sbjct: 403 DRVIISDTQSFNGAESVVINQ 423
>gi|58580368|ref|YP_199384.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58424962|gb|AAW73999.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 462
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 94/399 (23%), Positives = 176/399 (44%), Gaps = 18/399 (4%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
+ +A L +GW + A + DA + I V+ + DG+V L
Sbjct: 68 LAAVAVLAGIGWAVTAWSAGSRSFDASRVRIATVSQGDLVRDIAADGRVIAANSPVLYAI 127
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA--EKQNLLRNTQVTMEQD 137
G V VV G V++G + R+ + L ++ +A LA E ++ T+ +
Sbjct: 128 SAGTVTLSVVA-GDVVKQGQELARIDSPELRSKLAQEQATLAGLEAESSRAALDATLARA 186
Query: 138 RLRNKTEKLQLDL-----DITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
T++ ++D D+ R QR Y E A++ + D + Q+ AL
Sbjct: 187 NASKLTDQAKVDRQAAARDLERYQRGYDSGAVPQVELAKAQDTLKKTDIDLQHAQRDAAL 246
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQN 252
+ D+ + + D+ +A ++R V + L + S DG++G + V
Sbjct: 247 KSQGADLDARNKRLLADRQRAVVAEVQRQV-------DALTLLSPFDGQVGQVQAVQHTQ 299
Query: 253 VSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN-FELSVRKVYPEVRDG 311
V+ I + DLS +++E + E + + G+ A G F ++ V PEV +G
Sbjct: 300 VAANAPILGVIDLSKFEVEIKVPESFARDLAIGMPAQLTSGSGEPFPGAMSAVSPEVVNG 359
Query: 312 KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKK 371
+ FT ++P +R Q + + + + +G F + +GG++ +V+D G
Sbjct: 360 EVTARIRFTDKQPPGLRQSQRMSARVVMDTRRNVLKVERGPFVEQSGGSYAYVMD--GNT 417
Query: 372 AYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
A RR +RIG + +VL GL+ G+RVV+S +++ ++
Sbjct: 418 AVRRPVRIGVSSLGDVQVLSGLQVGDRVVVSGADNFGDT 456
>gi|84622334|ref|YP_449706.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84366274|dbj|BAE67432.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 423
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 94/399 (23%), Positives = 176/399 (44%), Gaps = 18/399 (4%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
+ +A L +GW + A + DA + I V+ + DG+V L
Sbjct: 29 LAAVAVLAGIGWAVTAWSAGSRSFDASRVRIATVSQGDLVRDIAADGRVIAANSPVLYAI 88
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA--EKQNLLRNTQVTMEQD 137
G V VV G V++G + R+ + L ++ +A LA E ++ T+ +
Sbjct: 89 SAGTVTLSVVA-GDVVKQGQELARIDSPELRSKLAQEQATLAGLEAESSRAALDATLARA 147
Query: 138 RLRNKTEKLQLDL-----DITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
T++ ++D D+ R QR Y E A++ + D + Q+ AL
Sbjct: 148 NASKLTDQAKVDRQAAARDLERYQRGYDSGAVPQVELAKAQDTLKKTDIDLQHAQRDAAL 207
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQN 252
+ D+ + + D+ +A ++R V + L + S DG++G + V
Sbjct: 208 KSQGADLDARNKRLLADRQRAVVAEVQRQV-------DALTLLSPFDGQVGQVQAVQHTQ 260
Query: 253 VSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN-FELSVRKVYPEVRDG 311
V+ I + DLS +++E + E + + G+ A G F ++ V PEV +G
Sbjct: 261 VAANAPILGVIDLSKFEVEIKVPESFARDLAIGMPAQLTSGSGEPFPGAMSAVSPEVVNG 320
Query: 312 KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKK 371
+ FT ++P +R Q + + + + +G F + +GG++ +V+D G
Sbjct: 321 EVTARIRFTDKQPPGLRQSQRMSARVVMDTRRNVLKVERGPFVEQSGGSYAYVMD--GNT 378
Query: 372 AYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
A RR +RIG + +VL GL+ G+RVV+S +++ ++
Sbjct: 379 AVRRPVRIGVSSLGDVQVLSGLQVGDRVVVSGADNFGDT 417
>gi|114570243|ref|YP_756923.1| efflux transporter, RND family, MFP subunit [Maricaulis maris
MCS10]
gi|114340705|gb|ABI65985.1| efflux transporter, RND family, MFP subunit [Maricaulis maris
MCS10]
Length = 421
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 88/396 (22%), Positives = 179/396 (45%), Gaps = 26/396 (6%)
Query: 19 IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSP 78
I+ + +L +I+ + +DA + +G E F V V G V +T L
Sbjct: 23 IIAAVGLVLAGALIIWRSGLFVATLDADRVVLGQARSELFAPEVTVPGVVIDMTNTALPS 82
Query: 79 EEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQI-----------LNAEAELAEKQNLL 127
E G V E G V G++++ L N L+ +I L EA++A+ +
Sbjct: 83 SESGSVSEIHFRNGDPVTSGEVVLLLRNPALEREIADSLVRLGRDSLAIEAQIADLNRRV 142
Query: 128 RNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQ 187
+ + + + R + + +L+ ++ QR + ++ +L F A+E +
Sbjct: 143 SDARSQLREISFRKRQAETELERNLVLEQRGFASPARM--ARLRDEVAFYAAEE----LD 196
Query: 188 QKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDV 247
+ L RL D RS +++ + L + ++ I +R + L +R+ DG++ L +
Sbjct: 197 ASNVLNAARLDADR--RSERLNAAQARLERLSQS---IADRLDGLAIRAPGDGQISGLAL 251
Query: 248 VLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPE 307
+G+ V G + + + ++ A + E + + GL A R+ + EL + + P+
Sbjct: 252 SVGEPVVAGDVLFTLTEGRPDRVTAQVMESAVHNLSVGLNARL-REPHSGELRIEAIDPQ 310
Query: 308 VRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDK 367
RDG +F P N+R+GQ + ++ +P +I +P F + G + ++V +
Sbjct: 311 ARDGIVDVRLIFVSAVPGNLRAGQMVQVAIETEEPRMAITVP---FGELVGPDTVWVYND 367
Query: 368 DGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISS 403
+A R +R+GR+ E+++GL E +++S+
Sbjct: 368 QSGEAVPRAVRVGRRAGSRIEIVDGLSGDETILVSA 403
>gi|149114595|ref|ZP_01841347.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
OS223]
gi|146865716|gb|EDK51013.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
OS223]
Length = 435
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 103/410 (25%), Positives = 190/410 (46%), Gaps = 22/410 (5%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP ++GG A L+ + W G + + + I+ + V G++
Sbjct: 33 KRLKLPLLIGGCALLVSALVWASLGTDSVSKSLSRSDITTATLFVGTLTRDVATTGKIVA 92
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V +GD++ +L + L Q+ A++ LA Q+ L
Sbjct: 93 ANAPILYSTEEGTVT-LLSNPGDSVNKGDVVAKLDSPRLSNQLDQAKSILAGMQSALERA 151
Query: 131 QVTMEQDRLR-NKT-EKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ 188
++ + +L+ N+T + +DL+ R+R R+ E L KLI+ D+ + K++ +
Sbjct: 152 KLDARRGQLQVNQTLDMAAVDLEAANRER--RRGELLIKNKLISEIDYEKGKDELHKAKL 209
Query: 189 K--HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE---RKENLNVRSQIDGELG 243
K HA L +D++ ++ +E + R L + E + E LN+++ + G +G
Sbjct: 210 KFAHAEQEVALTKDTLTFEVKNKALE-----VERQTLAVHELERQVEALNIKAPVGGIIG 264
Query: 244 LLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SV 301
+S Q I + DLS Y+ E + E Y D + GL E G+ +L +
Sbjct: 265 NWITEQKTRLSANQPILTVVDLSAYEAELAVPESYADDL--GLGMEVELSFGSVKLMGKL 322
Query: 302 RKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNW 361
+ PEVR+ + F + +R Q + L + +++ +G F S GG+
Sbjct: 323 SSISPEVRNREVTARVQFVQDNSLKLRQNQRISARVLLEHRPDVLMVKRGAFMTSGGGDE 382
Query: 362 IFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
++ ++ G A RR I++G + EVL+G +AG+ VISS E + ++E
Sbjct: 383 VYQIE--GDLASRRAIKLGSTSLSQVEVLDGGKAGDEWVISSVEPFNHAE 430
>gi|126175541|ref|YP_001051690.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
OS155]
gi|125998746|gb|ABN62821.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
OS155]
Length = 435
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 103/410 (25%), Positives = 190/410 (46%), Gaps = 22/410 (5%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP ++GG A L+ + W G + + + I+ + V G++
Sbjct: 33 KRLKLPLLIGGCALLVSALVWASLGTDSVSKSLSRSDITTAKLFVGTLTRDVATTGKIVA 92
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V +GD++ +L + L Q+ A++ LA Q+ L
Sbjct: 93 ANAPILYSTEEGTVT-LLSNPGDSVNKGDVVAKLDSPRLSNQLDQAKSILAGMQSALERA 151
Query: 131 QVTMEQDRLR-NKT-EKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ 188
++ + +L+ N+T + +DL+ R+R R+ E L KLI+ D+ + K++ +
Sbjct: 152 KLDARRGQLQVNQTLDMAAVDLEAANRER--RRGELLIKNKLISEIDYEKGKDELHKAKL 209
Query: 189 K--HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE---RKENLNVRSQIDGELG 243
K HA L +D++ ++ +E + R L + E + E LN+++ + G +G
Sbjct: 210 KFAHAEQEVALTKDTLTFEVKNKALE-----VERQTLAVHELERQVEALNIKAPVGGIIG 264
Query: 244 LLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SV 301
+S Q I + DLS Y+ E + E Y D + GL E G+ +L +
Sbjct: 265 NWITEQKTRLSANQPILTVVDLSAYEAELAVPESYADDL--GLGMEVELSFGSVKLMGKL 322
Query: 302 RKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNW 361
+ PEVR+ + F + +R Q + L + +++ +G F S GG+
Sbjct: 323 SSISPEVRNREVTARVQFVQDNSLKLRQNQRISARVLLEHRPDVLMVKRGAFMTSGGGDE 382
Query: 362 IFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
++ ++ G A RR I++G + EVL+G +AG+ VISS E + ++E
Sbjct: 383 VYQIE--GDLASRRAIKLGSTSLSQVEVLDGGKAGDEWVISSVEPFNHAE 430
>gi|114048652|ref|YP_739202.1| efflux transporter, RND family, MFP subunit [Shewanella sp. MR-7]
gi|113890094|gb|ABI44145.1| efflux transporter, RND family, MFP subunit [Shewanella sp. MR-7]
Length = 420
Score = 99.8 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 97/408 (23%), Positives = 184/408 (45%), Gaps = 18/408 (4%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP ++GG L+ + W FG+ + + ++ + V G++
Sbjct: 18 KRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATLYVGTLTRDVATTGKIVA 77
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V +GD++ +L + L Q+ A++ LA ++ L
Sbjct: 78 ANAPILYSTEEGTVT-LLSNPGDSVSKGDVVAKLDSPRLTNQLEQAKSLLAGLESALERA 136
Query: 131 QVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ-- 188
++ +++L+ +D+ R R+ + L KLI++ D+ + K+D +
Sbjct: 137 KLDARRNQLQVNQTLDMASVDLEAADRESRRGDLLIQSKLISQIDYEKGKDDLHKAKLKF 196
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE---RKENLNVRSQIDGELGLL 245
KHA L +D++ ++ +E M R L ++E + + LN+++ + G +G
Sbjct: 197 KHAEQEVALTKDTLTFEVKNKALE-----MERQSLAVKELERQVDALNIKAPVSGIIGNW 251
Query: 246 DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SVRK 303
+S Q I + DLS Y+ E + E Y D + GL E G +L +
Sbjct: 252 LTEQKTRLSANQPILTVVDLSAYEAELAVPESYADEL--GLGMEVELSFGEVKLMGKLSS 309
Query: 304 VYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIF 363
+ PEVR+ + F +R Q + L +++ +G F S GG+ ++
Sbjct: 310 ISPEVRNREVTARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFMTSGGGDEVY 369
Query: 364 VLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
+ +G A RR+I++G + EV+EG +AG+ VISS E + ++E
Sbjct: 370 QV--EGDIATRREIKLGSTSMSQVEVIEGGKAGDEWVISSVEPFNHAE 415
>gi|152999530|ref|YP_001365211.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
OS185]
gi|151364148|gb|ABS07148.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
OS185]
Length = 435
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 102/410 (24%), Positives = 190/410 (46%), Gaps = 22/410 (5%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP ++GG A L+ + W G + + + I+ + V G++
Sbjct: 33 KRLKLPLLIGGCALLVSALVWASLGTDSVSKSLSRSDITTATLFVGTLTRDVATTGKIVA 92
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V +GD++ +L + L Q+ A++ LA Q+ L
Sbjct: 93 ANAPILYSTEEGTVT-LLSNPGDSVDKGDVVAKLDSPRLSNQLEQAKSILAGMQSALERA 151
Query: 131 QVTMEQDRLR-NKT-EKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ 188
++ + +L+ N+T + +DL+ R+R R+ E L KLI+ D+ + K++ +
Sbjct: 152 KLDARRGQLQVNQTLDMAAVDLEAANRER--RRGELLIKNKLISEIDYEKGKDELHKAKL 209
Query: 189 K--HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE---RKENLNVRSQIDGELG 243
K HA L +D++ ++ +E + R L + E + + LN+++ + G +G
Sbjct: 210 KFAHAEQEVALTKDTLTFEVKNKALE-----VERQTLAVHELERQVDALNIKAPVGGIIG 264
Query: 244 LLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SV 301
+S Q I + DLS Y+ E + E Y D + GL E G+ +L +
Sbjct: 265 NWITEQKTRLSANQPILTVVDLSAYEAELAVPESYADDL--GLGMEVELSFGSVKLMGKL 322
Query: 302 RKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNW 361
+ PEVR+ + F + +R Q + L + +++ +G F S GG+
Sbjct: 323 SSISPEVRNREVTARVQFVQDNSLKLRQNQRISARVLLEHRPDVLMVKRGAFMTSGGGDE 382
Query: 362 IFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
++ ++ G A RR I++G + EVL+G +AG+ VISS E + ++E
Sbjct: 383 VYQIE--GDLASRRAIKLGSTSLSQVEVLDGGKAGDEWVISSVEPFNHAE 430
>gi|24375191|ref|NP_719234.1| hypothetical protein SO_3694 [Shewanella oneidensis MR-1]
gi|24349974|gb|AAN56678.1|AE015803_9 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 419
Score = 98.6 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 105/410 (25%), Positives = 191/410 (46%), Gaps = 23/410 (5%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP I+GG L+ + W F + + + ++ + V G++
Sbjct: 18 KRLKLPLIIGGCTLLVSALVWASFSSDKVSQSISRSELTTATLHVGTLTRDVATTGKIVA 77
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V RGD++ +L + L + A++ LA Q+ L
Sbjct: 78 ANAPILYSTEEGTVT-LLSNPGDNVARGDVVAKLDSPRLTNALEQAQSVLAGMQSALERA 136
Query: 131 QVTMEQDRLR-NKT-EKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ 188
++ + +L+ N+T + ++DL+ R+R R+ E L KLI + D+ + K+D +
Sbjct: 137 KLDARRSQLQANQTLDMAKVDLEAAERER--RRGELLIQSKLIGQIDYEKGKDDLHKAKL 194
Query: 189 K--HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE---RKENLNVRSQIDGELG 243
K HAL L +D++ ++ +E + R L +RE + E LN+++ ++G +G
Sbjct: 195 KFEHALQEVALTKDTLTFEVKNKALE-----VERQQLAVRELERQVEALNIKAPVNGIIG 249
Query: 244 LLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SV 301
++S Q I + DLS Y+ E + E Y D + GL E G +L +
Sbjct: 250 NWLTEQKNHLSANQPILTVVDLSAYEAELAVPESYADEL--GLGMEVELSFGEVKLIGKL 307
Query: 302 RKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNW 361
+ PEVR+ + FT +R Q + L +++ +G F S GG+
Sbjct: 308 SSISPEVRNREVTARVQFTQNDSLKLRQNQRISARVLLEHRDNVLMVKRGAFMTS-GGDE 366
Query: 362 IFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
++ + +G A RR+I++G + EV+EG +A + VISS E + ++E
Sbjct: 367 VYQV--EGDIATRRQIKLGSTSMSQVEVVEGGKASDVWVISSVEPFNHAE 414
>gi|113969205|ref|YP_732998.1| efflux transporter, RND family, MFP subunit [Shewanella sp. MR-4]
gi|113883889|gb|ABI37941.1| efflux transporter, RND family, MFP subunit [Shewanella sp. MR-4]
Length = 420
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 97/406 (23%), Positives = 184/406 (45%), Gaps = 14/406 (3%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP ++GG L+ + W FG+ + + ++ + V G++
Sbjct: 18 KRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATLYVGTLTRDVATTGKIVA 77
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V +GD++ +L + L Q+ A++ LA ++ L
Sbjct: 78 ANAPILYSTEEGTVT-LLSNPGDSVSKGDVVAKLDSPRLTNQLEQAKSLLAGLESALERA 136
Query: 131 QVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ-- 188
++ +++L+ +D+ R R+ + L KLI++ D+ + K+D +
Sbjct: 137 KLDARRNQLQVNQTLDMASVDLEAADRESRRGDLLIQSKLISQIDYEKGKDDLHKAKLKF 196
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERK-ENLNVRSQIDGELGLLDV 247
KHA L +D++ ++ +E ++ N L ER+ + LN+++ + G +G
Sbjct: 197 KHAEQEVALTKDTLTFEVKNKALEVERQSLAVNEL---ERQVDALNIKAPVSGIIGNWLT 253
Query: 248 VLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SVRKVY 305
+S Q I + DLS Y+ E + E Y D + GL E G +L + +
Sbjct: 254 EQKTRLSANQPILTVVDLSAYEAELAVPESYADEL--GLGMEVELSFGEVKLMGKLSSIS 311
Query: 306 PEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVL 365
PEVR+ + F +R Q + L +++ +G F S GG+ ++ +
Sbjct: 312 PEVRNREVTARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFMTSGGGDEVYQV 371
Query: 366 DKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
+G A RR+I++G + EV+EG +AG+ VISS E + ++E
Sbjct: 372 --EGDIATRREIKLGSTSMSQVEVIEGGKAGDEWVISSVEPFNHAE 415
>gi|117921700|ref|YP_870892.1| efflux transporter, RND family, MFP subunit [Shewanella sp. ANA-3]
gi|117614032|gb|ABK49486.1| efflux transporter, RND family, MFP subunit [Shewanella sp. ANA-3]
Length = 420
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 96/408 (23%), Positives = 183/408 (44%), Gaps = 18/408 (4%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP ++GG L+ + W FG+ + + ++ + V G++
Sbjct: 18 KRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATLYVGTLTRDVATTGKIVA 77
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V +GD++ +L + L Q+ A++ LA ++ L
Sbjct: 78 ANAPILYSTEEGTVT-LLSNPGDSVSKGDVVAKLESPRLTNQLEQAKSLLAGLESALERA 136
Query: 131 QVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ-- 188
++ +++L+ +D+ R R+ + L KLI++ D+ + K+D +
Sbjct: 137 KLDARRNQLQVNQTLDMASVDLEAADRESRRGDLLIQSKLISQIDYEKGKDDLHKAKLKF 196
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE---RKENLNVRSQIDGELGLL 245
KHA L +D++ ++ +E + R L ++E + + LN+++ + G +G
Sbjct: 197 KHAEQEVALTKDTLTFEVKNKALE-----VERQSLAVKELERQVDALNIKAPVSGIIGNW 251
Query: 246 DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SVRK 303
+S Q I + DLS Y+ E + E Y D + GL E G +L +
Sbjct: 252 LTEQKTRLSANQPILTVVDLSAYEAELAVPESYADEL--GLGMEVELSFGEVKLMGKLSS 309
Query: 304 VYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIF 363
+ PEVR+ + F +R Q + L +++ +G F S GG+ ++
Sbjct: 310 ISPEVRNREVTARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFMTSGGGDEVY 369
Query: 364 VLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
+ +G A RR I++G + EV+EG +AG+ VISS E + ++E
Sbjct: 370 QV--EGDIATRRDIKLGSTSMSLVEVIEGGKAGDEWVISSVEPFNHAE 415
>gi|21230043|ref|NP_635960.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769963|ref|YP_244725.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. 8004]
gi|21111564|gb|AAM39884.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66575295|gb|AAY50705.1| ABC transporter permease [Xanthomonas campestris pv. campestris
str. 8004]
Length = 423
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 92/399 (23%), Positives = 176/399 (44%), Gaps = 18/399 (4%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
+ +A L + W + A + DA + I V+ + DG+V L
Sbjct: 29 IAALAVLAGISWAVNAWSAGSRSFDAARVRIATVSQGDLVRDIAADGRVIAANSPVLYAI 88
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA--EKQNLLRNTQVTMEQD 137
G V VV G V++G + R+ + L ++ +A LA E ++ T+ +
Sbjct: 89 SAGTVTLSVVA-GDVVKQGQELARIDSPELRSKLAQEQATLAGLEAESSRAALDATLARA 147
Query: 138 RLRNKTEKLQLD-----LDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
T++ ++D D+ R QR Y E A++ + D + Q+ AL
Sbjct: 148 SASKLTDEAKIDKQAAVRDLERYQRGYDGGAVPQVELAKAQDTLKKTDIDLQHAQRDAAL 207
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQN 252
+ DS + + D+ +A ++R V + L + S DG++G + V
Sbjct: 208 KGQGADLDSRNKRLLADRQRAVVAEVQRQV-------DALTLLSPFDGQVGQVQAVQHTQ 260
Query: 253 VSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN-FELSVRKVYPEVRDG 311
V+ I + DLS +++E + E + + G+ A G F ++ V PEV +G
Sbjct: 261 VAANAPILGVVDLSKFEVEIKVPESFARELAIGMPAQLTSGSGEPFAGAISAVSPEVVNG 320
Query: 312 KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKK 371
+ FT ++P +R Q + + + + +G F + +GG++ +V+ +G
Sbjct: 321 EVTARIRFTDKQPPGLRQSQRMSARVVIDTRRNVLKVERGPFVEQSGGSYAYVM--EGST 378
Query: 372 AYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
A RR +++G + +VL GL+AG+RVV+S +++ ++
Sbjct: 379 AARRPVKLGVSSLGEVQVLSGLQAGDRVVVSGADNFGDA 417
>gi|94967397|ref|YP_589445.1| Secretion protein HlyD [Acidobacteria bacterium Ellin345]
gi|94549447|gb|ABF39371.1| Secretion protein HlyD [Acidobacteria bacterium Ellin345]
Length = 437
Score = 95.5 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 79/339 (23%), Positives = 157/339 (46%), Gaps = 1/339 (0%)
Query: 74 VQLSPEEGGIVQEKVVE-EGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQV 132
V+L P E ++V+ G+ V ++V +SN ++ + ++A +L + +N +V
Sbjct: 94 VRLIPAETDATVLRIVKLSGSPVNSDTVLVEMSNPQVEQEAVDANLQLKAAEAEYQNLKV 153
Query: 133 TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
++ D + K + D ++ QR + LYD +I+ + ++ + + ++ L
Sbjct: 154 KLDADLMTQKAGAATVGADYSQAQRQASTDKALYDLGVISGLAYKASQGKADELTTRNDL 213
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQN 252
++L + QM + + MR L + + + L VR+ IDG L + + +GQ
Sbjct: 214 EGQKLTINQKAIVSQMAVQQAKVEQMRALAQLKQRQLDKLKVRAGIDGLLVDMPLQVGQR 273
Query: 253 VSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGK 312
V G + +I + I E V+ G A+ + G + SV +V P V +G
Sbjct: 274 VLAGAVLAKIVQPNRLMASLKIPETQARDVQIGEPASVDTHNGVVQGSVMRVDPAVVNGT 333
Query: 313 FRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKA 372
D TG+ P R + + L + +++ + + F Q +F LD DGK A
Sbjct: 334 VTVDVKLTGDLPKGARPDLSVDGTIDLERLDKTVYVGRPAFGQENSTISLFRLDPDGKGA 393
Query: 373 YRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
R +++GR + +V+EGL+ G+ V++S + +++
Sbjct: 394 SRVPVKVGRTSVNTIQVIEGLKPGDTVILSDMSRWDSND 432
>gi|120597784|ref|YP_962358.1| efflux transporter, RND family, MFP subunit [Shewanella sp.
W3-18-1]
gi|124546307|ref|ZP_01705412.1| efflux transporter, RND family, MFP subunit [Shewanella
putrefaciens 200]
gi|146294082|ref|YP_001184506.1| efflux transporter, RND family, MFP subunit [Shewanella
putrefaciens CN-32]
gi|120557877|gb|ABM23804.1| efflux transporter, RND family, MFP subunit [Shewanella sp.
W3-18-1]
gi|124510259|gb|EAY54330.1| efflux transporter, RND family, MFP subunit [Shewanella
putrefaciens 200]
gi|145565772|gb|ABP76707.1| efflux transporter, RND family, MFP subunit [Shewanella
putrefaciens CN-32]
Length = 435
Score = 95.1 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 98/408 (24%), Positives = 181/408 (44%), Gaps = 18/408 (4%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
++ LP ++ G A L+ + W G+ + + + I+ + V G++
Sbjct: 33 KRLKLPLLISGCALLVSALVWASLGSDSVSKSLSRSDITTATLYVGTLTRDVATTGKIVA 92
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G V + G V +GD++ +L + L Q+ A++ LA ++ L
Sbjct: 93 ANAPILYSTEEGTVT-LLSNPGDTVNKGDVVAKLDSPRLTNQLEQAKSVLAGMESALERA 151
Query: 131 QVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQK- 189
++ +D+L+ +D+ +R R+ E L +LI + D+ + K+D + K
Sbjct: 152 KLDARRDQLQAYQTLDMATVDLEAAERESRRGELLIQSQLIGQIDYEKGKDDLHKAKLKF 211
Query: 190 -HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE---RKENLNVRSQIDGELGLL 245
HA L +D++ ++ +E + R L +RE + E LN+ + ++G +G
Sbjct: 212 KHAEQEVALTKDTLTFEVKNKALE-----VERQTLAVRELERQVEALNIVAPVNGIIGNW 266
Query: 246 DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SVRK 303
+S Q I + DLS Y+ E + E Y D + GL E G+ +L +
Sbjct: 267 ITEQKTRLSANQPILTVVDLSAYEAELAVPESYADDL--GLGMEVELSFGSIKLMGKLSS 324
Query: 304 VYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIF 363
+ PEVR+ + F +R Q + L +++ +G F S GG +
Sbjct: 325 ISPEVRNREVTARVQFDQNDSLKLRQNQRISARVLLEHRPNVLMVKRGAFMTSGGGEETY 384
Query: 364 VLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
++ G A RR I++G + EVL+G +AG+ VISS + + +E
Sbjct: 385 QVE--GDLATRRAIKLGSTSLSQVEVLDGGKAGDEWVISSLDPFNRAE 430
>gi|90019958|ref|YP_525785.1| HlyD family secretion protein [Saccharophagus degradans 2-40]
gi|89949558|gb|ABD79573.1| Secretion protein HlyD [Saccharophagus degradans 2-40]
Length = 416
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 96/428 (22%), Positives = 180/428 (42%), Gaps = 26/428 (6%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFL--LLVG----WMIFGNHASTLRVDARGISIGHVT 54
MDI + +KK K YI G+ L LL+G W++ + ++ ++ G V
Sbjct: 1 MDIAIARKKPAYGK---YIALGVVVLTALLIGVRALWVL---SLADFSLERSKLTFGQVQ 54
Query: 55 HEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQIL 114
F VR +G + P + L+ E V +V++ G V +GD+I L+N L +
Sbjct: 55 QGDFTVSVRGNGVLVPENIQWLAAETEATVIRRVLKAGHIVSKGDLIAELANPQLVQLLA 114
Query: 115 NAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIARE 174
+ EL + L+ QV E + L K+ L+ R Q Y Q L +++
Sbjct: 115 ETQWELTATEEELKAAQVQQETELLSQKSIVENAKLNFERSQLEYVAQTDLIKTGAVSKI 174
Query: 175 DFL-------QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE 227
F Q ++ + Q+++ + + L + R ++ QM++ L + ++
Sbjct: 175 AFQRTQLETSQFEQRWHTSQEQYLKMQQNLLAQNRARQARLSQMKNRLERL-------QQ 227
Query: 228 RKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLA 287
R + L VR+ D + + + GQ + G I ++ E + E I+ V G
Sbjct: 228 RVDGLQVRATFDSIVLDVPIEAGQRIQAGANIAKLAQQDALYAELSVPELKINDVAVGQK 287
Query: 288 ATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESII 347
+ + V ++ P V +G + D VFT P + R + + ++
Sbjct: 288 VLIDTRNTVVNGKVARIDPTVINGNVQVDVVFTQPLPSDARPDLSVDGEIITAHIENTLY 347
Query: 348 IPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESY 407
+ + QS ++ + D + A R + +G +P ++LEGL AG+ +V+S +
Sbjct: 348 VTRPLLSQSNSRAALYKVRDDNQFAERVHVSLGASSPNRIQILEGLNAGDTIVVSDPSLF 407
Query: 408 KNSEILIL 415
+ I L
Sbjct: 408 QTYNIFRL 415
>gi|71279929|ref|YP_268844.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
gi|71145669|gb|AAZ26142.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
Length = 418
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 100/429 (23%), Positives = 194/429 (45%), Gaps = 29/429 (6%)
Query: 1 MDIQLEK-KKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFN 59
MDI ++K KK + K+ P + + + + F A + +D + G V F+
Sbjct: 1 MDIAVKKQKKTLLKRVWPLALVIAILAIALNYSAFLLQADYV-IDDDTLVYGEVKQGPFS 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNL---------D 110
VR G + P + L+ G V+ VV+ G V++G++I+ LSN L +
Sbjct: 60 ISVRGAGLLVPDKIKWLAASVDGHVERVVVKPGKSVKKGELIIELSNPRLKQLQEETKWE 119
Query: 111 LQILNAE--AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDE 168
L+ + AE A AE+++ L + M +L ++ KL+LD Q +L++
Sbjct: 120 LEAIIAESKASQAEQKSGLLFQKARMLDAKLNYQSSKLKLD-----------AQRELFNN 168
Query: 169 KL--IAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIR 226
K +++ D+ + K + + Q+ + E L + +Q + + MR+ +
Sbjct: 169 KTGAVSKIDYEKTKLETQQFNQRWKIQEEVLVSMTDNIVVQDNAHNSRINKMRKTLERAE 228
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
++ ++L + + +D + + V GQ V+ G + ++ E + E I V G
Sbjct: 229 QQVKDLMIYASLDSVVQDVSVEPGQRVNMGSNLAKLAQQDSLIAELQVAELLIGEVSIGQ 288
Query: 287 AATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESI 346
T + + V +V P V +G + D FT P + R + + + +++
Sbjct: 289 LVTIDTRNNTVSGIVARVDPAVVNGNVQVDVTFTEALPSDARPDLSVDGEIMITDIADTL 348
Query: 347 IIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI---SS 403
+ + F Q I+ L++DG A R ++++G+ + +V+EGL G+RV+I SS
Sbjct: 349 YVSRPIFSQRQSNTTIYKLNQDGNLAQRTQVKLGKGSINQIQVIEGLAVGDRVIISDSSS 408
Query: 404 YESYKNSEI 412
++ YK I
Sbjct: 409 WQKYKKVRI 417
>gi|108763190|ref|YP_635260.1| efflux transporter, RND family, MFP subunit [Myxococcus xanthus DK
1622]
gi|108467070|gb|ABF92255.1| efflux transporter, RND family, MFP subunit [Myxococcus xanthus DK
1622]
Length = 414
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 99/411 (24%), Positives = 174/411 (42%), Gaps = 2/411 (0%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
MDI KK R+K +GG LLLV + + V+ + + V
Sbjct: 1 MDIPKAKKP--RRKPWVLAIGGACVLLLVTVGLSRLRPAAPTVERASVWLDTVKRGPMVR 58
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
V+ G + P + L+ + G V+ V GA V +++ LSN ++ LQ L AE +L
Sbjct: 59 QVKGAGTLVPEYIRWLTADTAGRVERIHVRPGATVTADTLLLELSNPDVQLQALEAERQL 118
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
A + L ++ +E RL + L + R E L+ + I + QA+
Sbjct: 119 ASVEADLIQVRMELETQRLAQEAMVAALINESAEAGRRSDANEALHQKAHIGDLEMQQAR 178
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
E + ++ L ++L + Q+ + + ++ R + E++ V + DG
Sbjct: 179 EKAAELSRRLELERKKLQVVASSMKEQLTAQQGQVERLKAVARFRRAQVESMKVLAGEDG 238
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
L L + LGQ V+PG + ++ K E I E ++ GL A + + G E
Sbjct: 239 VLQDLPLELGQWVTPGVLLAKVVKPERLKAELRIAETQARDIQPGLKALVDTRNGVVEGQ 298
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
V +V P G R + E P R T ++L + + + + + Q
Sbjct: 299 VARVAPAASQGTVRVEVSLPAELPRGARPDLTVEGTVELERLGDVLSVGRPAGAQPNATM 358
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
+F L +A R +++GR + EVL+GL+ G++VV+S ++ E
Sbjct: 359 ALFRLMPGSDEAVRVPVQLGRGSVNAVEVLQGLQEGDQVVLSDMAAWDAVE 409
>gi|119878373|ref|ZP_01645311.1| efflux transporter, RND family, MFP subunit [Stenotrophomonas
maltophilia R551-3]
gi|119819107|gb|EAX21759.1| efflux transporter, RND family, MFP subunit [Stenotrophomonas
maltophilia R551-3]
Length = 443
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 88/399 (22%), Positives = 178/399 (44%), Gaps = 17/399 (4%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
+G IA L +GW + ++ D+ + I V + DG+V L
Sbjct: 50 LGAIALLAGIGWAVHAWSNASRSFDSSRVRIAEVKRGDLVRDIAADGRVIAANSPILYAI 109
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRL 139
G V KVV G V++G + + + L ++ +A LA + + R
Sbjct: 110 SAGTVDLKVVA-GDVVKKGQELAVIDSPELRSKLAQEQATLAGLEAESSRAALDATLARA 168
Query: 140 RNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQ 199
+++ E Q ++ R ++ ++ YD + + D +AK+ +K + +
Sbjct: 169 KSRKETDQATIERQAADRDLQRYQRGYDGGAVPQIDLAKAKDSL----KKADITLANATT 224
Query: 200 DSIYRSIQMDQMEDN---LANMRRNVLLIRERK-ENLNVRSQIDGELGLLDVVLGQNVSP 255
D+ +S D N LA+ ++ V+ +R+ + L +R+ DG++G + + N++
Sbjct: 225 DAHLQSQGADLDARNKRLLADRQKAVVAEVQRQVDALTLRAPFDGQVGQVQAIQSTNLAA 284
Query: 256 GQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN---FELSVRKVYPEVRDGK 312
+ + DLS +++E + E + + G+ A GGN F + V PEV +G+
Sbjct: 285 NAPVLGVVDLSKFEVEIKVPESFARDLAIGMPAQL--TGGNGKPFPGEISAVSPEVVNGE 342
Query: 313 FRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKA 372
F +P+ +R Q + + L + + + +G F + G +V+D G+ A
Sbjct: 343 VNARVRFASAQPEGLRQSQRMSVRVLLDTRKDVLKVERGPFVEQ-GNGIAYVMD--GRTA 399
Query: 373 YRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
RR + +G + E+ G++ G+R+V+S + +K++E
Sbjct: 400 VRRPVELGVSSLGEVEIKSGVQPGDRIVVSGSDLFKDAE 438
>gi|109898720|ref|YP_661975.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
atlantica T6c]
gi|109701001|gb|ABG40921.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
atlantica T6c]
Length = 443
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 87/395 (22%), Positives = 185/395 (46%), Gaps = 23/395 (5%)
Query: 37 HASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQL-SPEEGGIVQEKVVEEGAQV 95
+S + A+ I +G V + V G+V +L SP +G I +V+ G V
Sbjct: 58 QSSDTSISAKRIHLGKVVRGDLVRDLSVQGRVVAAVSPRLYSPAQGTI--NLLVDAGDSV 115
Query: 96 RRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRR 155
+G ++ + + L ++ E+ L + + L ++ ++ L+N+ ++ +
Sbjct: 116 IKGQVVASVDSPELTNELQQEESSLQKLKMELDRQRIQAKKQALKNQKAVDLANVALVAA 175
Query: 156 QRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ--KHALIIERLHQDSIYRSIQMDQMED 213
R R+ +K + + I++ DF +A+++ E + +HA L ++S+ +Q Q+
Sbjct: 176 GREKRRADKAFGTQSISQIDFEKAQDELENAKLVFQHAKQDAALSKESLAFEVQSKQLL- 234
Query: 214 NLANMRRNVLLIRE---RKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKI 270
++R LL+ + + + L+VRS + G +G L V+ Q I + DLS++++
Sbjct: 235 ----VKRQALLVSDLARKVDTLDVRSPVSGIVGNLAAQQKNQVAKNQAILSVVDLSEFEL 290
Query: 271 EALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGE-------- 322
E I E Y D + ++A G ++ + PE+ + + F +
Sbjct: 291 EVDIPESYADDLAINMSAIVNINGDEHLATLVTISPEIENNQVTGRVRFANKDAQGNALI 350
Query: 323 RPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQ 382
+P +R Q + + + +++ +G F +S G +V+ +G A R I G +
Sbjct: 351 QPQGLRQNQRLTTRILMDKRPNVLMLSRGQFLESGSGRIAYVV--EGNLAKRTNIVTGVR 408
Query: 383 NPQYYEVLEGLEAGERVVISSYESYKNSEILILSK 417
+ EVL GL A ++V+ISS E + +++ +++++
Sbjct: 409 SLSNVEVLSGLTADQQVIISSTEQFNDAQTVLITQ 443
>gi|116625535|ref|YP_827691.1| efflux transporter, RND family, MFP subunit [Solibacter usitatus
Ellin6076]
gi|116228697|gb|ABJ87406.1| efflux transporter, RND family, MFP subunit [Solibacter usitatus
Ellin6076]
Length = 423
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 84/361 (23%), Positives = 160/361 (44%), Gaps = 6/361 (1%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
VR G + P + + G VQ ++ G V+ +++ L++ L+ +LNAE L
Sbjct: 63 VRGLGTLVPEETMLVPATTEGRVQRIIIRPGTPVKADSVVMILTSPELETDLLNAEYALK 122
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ N +VT+++ +L K+ Q+ D + + L E L + D +
Sbjct: 123 AAEADYANLKVTLQKLQLDMKSTVAQVGADFNTSKLQADRDSALAKEGLFSEVDAKISAV 182
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
+ + + + ER++ + Q+ + + +R L + + E L VR+ DG
Sbjct: 183 KAQELGNRLDIEKERINISASAEEAQLASQKVKVDQLRGQFNLKKSQVEQLKVRAGFDGV 242
Query: 242 LGLLD--VVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL 299
L L V +GQ V+ G +G+I S K E I E + V G A + + G E
Sbjct: 243 LQQLPTPVEVGQKVAAGTPLGKIAQPSKLKAELKIAETQVKDVTIGQHAVIDTRNGLIEG 302
Query: 300 SVRKVYPEVRDGKFRTDFVF----TGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQ 355
V ++ P + +G D G +R + ++L + + + + + F Q
Sbjct: 303 RVSRIDPSILNGTVTVDVALLPTKDGPPAGVLRPDLSVDGTIELERLNDVVFVGRPVFGQ 362
Query: 356 STGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
+F L+ DGK A + K+ +GR + E+ +GL+ G++V++S +Y + E + L
Sbjct: 363 QDSTVTLFKLEPDGKYANKIKVVLGRSSVNTIEIKDGLKVGDQVILSDMSAYDSYERIKL 422
Query: 416 S 416
+
Sbjct: 423 N 423
>gi|37520841|ref|NP_924218.1| hypothetical protein glr1272 [Gloeobacter violaceus PCC 7421]
gi|35211836|dbj|BAC89213.1| glr1272 [Gloeobacter violaceus PCC 7421]
Length = 420
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 96/394 (24%), Positives = 163/394 (41%), Gaps = 34/394 (8%)
Query: 26 LLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQ 85
++L W++ + V+ + I V VR G + P + + G V+
Sbjct: 30 VVLATWVVANLKPAAPTVERSTVWIDTVRRGALIRQVRGLGTLVPEQIRWIPALSEGRVE 89
Query: 86 EKVVEEGAQVRRGDIIVRLSNSNLD-------LQILNAEAELAE------KQNLLRNTQV 132
V GA V ++V L+N L+ LQ+ AEAELA Q L + +
Sbjct: 90 RIAVRPGAVVNPRTVLVELANPELEQSALDARLQLKAAEAELANLRVQTTSQLLTQRAAL 149
Query: 133 TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYD---EKLIAREDFLQAKEDYELVQQK 189
Q R + Q++ D+ R+ Q KL E+L R D + + + L ++
Sbjct: 150 AAVQSDFRQAELQRQVNDDLARQGLIGSLQAKLSTVKAEELATRSDLEKQRSEIALEARR 209
Query: 190 HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERK-ENLNVRSQIDGELGLLDVV 248
L ++ S +++Q+ R + +RE + L VR+ + G L L +
Sbjct: 210 AQLSVQ---------STKVEQL--------RTLTRLRESQVAALKVRAGMSGVLQQLPLE 252
Query: 249 LGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEV 308
+GQ V+PG + ++ D K E I E + G A + G VR++ P V
Sbjct: 253 VGQRVAPGTNLARVADPKTLKAEVKIAETQAKDILLGQPALIDTHNGTAAGRVRRIDPAV 312
Query: 309 RDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKD 368
++G + G P R + ++L + + + I + F +F L D
Sbjct: 313 QNGTVTVEVGLVGTLPKGARPDLSVDGTIELERAADVLYIGRPAFGGEASAVSLFKLTAD 372
Query: 369 GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
G +A R +R+GR + EVL GL GER ++S
Sbjct: 373 GTEAVRVPVRLGRGSVSTIEVLSGLTVGERAILS 406
>gi|127511655|ref|YP_001092852.1| efflux transporter, RND family, MFP subunit [Shewanella loihica
PV-4]
gi|126636950|gb|ABO22593.1| efflux transporter, RND family, MFP subunit [Shewanella loihica
PV-4]
Length = 420
Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 80/353 (22%), Positives = 168/353 (47%), Gaps = 32/353 (9%)
Query: 77 SPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQ 136
+PE+G + + G +V +G ++ + + +L L ++Q LL Q ++E+
Sbjct: 85 APEKGTVTL--IANPGDKVEQGQVVATIESHSL-------TNNLKQQQALLEGMQSSLER 135
Query: 137 DRLRNKTEKLQ----LDL---DITRRQRTYRQQEKLYDEKLIAREDFLQAKED------- 182
RL + ++L+ LD+ D+ R R+ ++L + LI++ D+ ++K++
Sbjct: 136 ARLDARRDQLKAIQTLDMAKVDLEAADRESRRGDQLIESSLISKIDYEKSKDELHKAKLL 195
Query: 183 YELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGEL 242
Y QQ+ L+ + L + ++ ++D+ +A + R V LN+ + + G +
Sbjct: 196 YAHAQQEAELMKDTLSFELKNKASEVDRQALVVAELERQV-------AALNITAPVGGII 248
Query: 243 GLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVR 302
G + Q I + DLS ++ E + E Y D + G+ G +
Sbjct: 249 GNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGIGMDVELNFGGQLVMGKLS 308
Query: 303 KVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWI 362
+ PEVR+ + T F + ++R Q + L + +++ +G F S GG +
Sbjct: 309 AISPEVRNREVTTRVRFEQQAALHLRQNQRLSARVLLENRPDVLMVKRGPFVNSGGGTLV 368
Query: 363 FVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
+ + D A R +I++G ++ + EV+ G E G++ +ISS +++KN+E +++
Sbjct: 369 YAVKND--LAERTEIQLGARSMSHIEVVSGGEVGDQWIISSTDAFKNAEQVLI 419
>gi|88860790|ref|ZP_01135427.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
gi|88817385|gb|EAR27203.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
Length = 421
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 90/413 (21%), Positives = 189/413 (45%), Gaps = 7/413 (1%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFG--NHASTLRVDARGISIGHVTHEQF 58
MDI+ K + + I G+A ++++ ++FG S + + A + I V F
Sbjct: 1 MDIETTLKSNGQNGYRRKIGWGLAAVVIM-LLLFGLKKWLSPVSMAASQLQIAEVISGDF 59
Query: 59 NDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
VR G+++ L+ + V+ V G +V++ +I+ L+N ++ A
Sbjct: 60 TVKVRGFGRLKAKYQRYLTNADVATVEAIHVYPGTRVQKDTVILSLTNPAQTQRLSVARL 119
Query: 119 ELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQ 178
ELA ++ + ++ + L + L ++ Q + +L D+ +++ D+ +
Sbjct: 120 ELARQKAQVNEQKINQKSQVLEREAGLTLLQSELENAQLRAEAESQLIDQGIVSSLDYKR 179
Query: 179 AKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQI 238
+ + ++Q+ A+ +RL Q + + ++ L N + ++ L VR+ I
Sbjct: 180 SLLTVKQLKQRVAIEQQRLVQLQAMQLERSKVQQELLHQFELNFNVQQQAFNELQVRAGI 239
Query: 239 DGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFE 298
DG L L+V LGQN+SPG ++G + + K E LI + +++ +AA +
Sbjct: 240 DGMLQELNVELGQNLSPGTRLGVVGSDASLKAELLIQQADAEKIALNMAAKVNTFSAEVD 299
Query: 299 LSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTY--YINLQLGQPTESIIIPKGTFFQS 356
+V ++ P V +G+ + G P N R + Y+ Q+ I +P+G ++
Sbjct: 300 ATVTRIDPIVTEGRVMIELALQGALPANARPDLSIEGYVISQVIPNALVISLPQGV--KA 357
Query: 357 TGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKN 409
N +F L+ + A+ + I G + ++L+G GE+++IS +++
Sbjct: 358 YSKNTLFKLNTNTHLAHPQPIEFGTLSDNKIQLLQGAAVGEQLIISDLSKWQH 410
>gi|71279598|ref|YP_267322.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
gi|71145338|gb|AAZ25811.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
Length = 423
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 85/393 (21%), Positives = 171/393 (43%), Gaps = 30/393 (7%)
Query: 37 HASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVR 96
++S +D + I+I V + V G+ QL E G + + + G V
Sbjct: 45 YSSIPTIDRKSINIETVILGDLIRDIVVSGKAVAANAPQLYSTEIGKIT-LLAKPGEAVA 103
Query: 97 RGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQ 156
I+ RL + LD A + ++Q+ L + + L +K +L L+ ++ Q
Sbjct: 104 LNQIVARLMSPELD-------ALIKQQQSTLEQLSINANRGVLADKEAQLDLESNMNAAQ 156
Query: 157 -------RTYRQQEKLYDEKLIAREDFLQ-------AKEDYELVQQKHALIIERLHQDSI 202
R +++ E Y +++I+ D+L+ AK +E +++ + +ERL +
Sbjct: 157 SKLNVAKREFQRAEISYGKQIISEVDWLKSQDAVADAKRLFEHAKKRVSFSVERLQFEKQ 216
Query: 203 YRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQI 262
+R + + + L + R R + L +++ + G +G V ++ I I
Sbjct: 217 HRDFLVQKEKLILEELSR-------RHDELAIKAPVKGVVGNWLVAQKNTIAANTAIMTI 269
Query: 263 NDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGE 322
DLS+Y+ E + E Y D + GL + + G + + + PEV+ +
Sbjct: 270 VDLSEYEAELSVPEFYADDLGIGLEVSMKISGVSVRGEIIAISPEVKGNQVTVRAKIKNS 329
Query: 323 RPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQ 382
+ +R Q ++ + +++ +G F S GG +IF L +D A + I G
Sbjct: 330 QNIQLRQNQRINARIEFEKKENVLMVKRGAFMGSLGGKFIFKLSED-NYADKTAITTGTS 388
Query: 383 NPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
+ +Y E+ G++ G++V+ S Y + +E + L
Sbjct: 389 SVEYIEITSGIDVGQQVITSDYVDFNKAEQIYL 421
>gi|114562075|ref|YP_749588.1| efflux transporter, RND family, MFP subunit [Shewanella
frigidimarina NCIMB 400]
gi|114333368|gb|ABI70750.1| efflux transporter, RND family, MFP subunit [Shewanella
frigidimarina NCIMB 400]
Length = 419
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 93/404 (23%), Positives = 179/404 (44%), Gaps = 15/404 (3%)
Query: 12 RKKHLPYIVGGIAFLL-LVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
RK LP ++G A L+ + W ++ VD + + +T + G++
Sbjct: 18 RKLRLPLMIGCGAILMSALVWASLSRDSNQRSVDGADLRLATLTRGTLVRDIATTGKIVA 77
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
L E G+V + + G +V G ++ ++ + L ++ ++ L Q L
Sbjct: 78 ANAPILYSTEEGVVT-LLSQPGDEVELGQVVAKIESPRLQSELQQQQSMLEGMQGSLERA 136
Query: 131 QVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQ--Q 188
++ +++LR +D+ R R+ ++L + LI++ DF ++K+D +
Sbjct: 137 KLDARREQLRVSQILDMAKVDLEAADRESRRGDQLIESSLISKIDFEKSKDDLHKAKLLH 196
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE--RKEN-LNVRSQIDGELGLL 245
KHA L +D++ I+ +E ++R L++RE R+ N L++ + + G +G
Sbjct: 197 KHAQQEVELMRDTLSFEIKNRTLE-----VQRQALVVRELTRQANALSIIAPVSGIIGNW 251
Query: 246 DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVY 305
V ++ Q I + DLS ++ E + E Y D + G+ N + +
Sbjct: 252 LVEQKARIAASQPILTVVDLSAFEAELAVPESYADELGLGMDVELSFGNVNVVGQLSSIS 311
Query: 306 PEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVL 365
PEVR+ + F ++R Q + L +I+ +G F G V
Sbjct: 312 PEVRNREVTARVRFADSNTLSLRQNQRLSARVLLENRPNVLIVKRGDFLNMGGEVAYQVS 371
Query: 366 DKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKN 409
D A+++ +++G ++ EVLEG EAG+ VIS E++KN
Sbjct: 372 D---AVAHKKVVKLGARSMSQVEVLEGGEAGDVWVISGTETFKN 412
>gi|56461157|ref|YP_156438.1| Membrane-fusion protein homolog [Idiomarina loihiensis L2TR]
gi|56180167|gb|AAV82889.1| Membrane-fusion protein homolog [Idiomarina loihiensis L2TR]
Length = 422
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 95/414 (22%), Positives = 183/414 (44%), Gaps = 24/414 (5%)
Query: 9 KGIRKKHLPYIVGGIAFLLLVGWMIFGN--HASTLRVDARGISIGHVTHEQFNDFVRVDG 66
K ++ LP V ++ LL++ IF + +++L + + V + V G
Sbjct: 17 KSTLRRFLPS-VAAVSLLLVLAVAIFQSFGQSASLTLPRNQMQFATVQRGDLVRDISVQG 75
Query: 67 QVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNL 126
++ L +E G VQ + G V++GD++ +++ L + EA LA Q+
Sbjct: 76 KIVAANAPTLYSQEIGQVQ-LFKQPGEAVKQGDLLATITSPALQNDLQQQEAVLAGMQSE 134
Query: 127 LRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE----- 181
++ + +L + +++ QR ++ + + +I + DF A++
Sbjct: 135 AERAELAAREQQLDTEQVMNTAQVNLLAAQRELQRAHQAIEFGVIRQLDFNIAEDNLATS 194
Query: 182 --DYELVQQKHALIIERL--HQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
++E ++K L ++L Q S +SI Q+ V ++ + LN+ +
Sbjct: 195 ELEFEHAKRKVELARDKLSFEQSSRVQSIHRQQLV---------VDELQRKVRALNITAP 245
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNF 297
+ G+LG V +V PGQ + + DLS Y+ E I E Y + AG A +
Sbjct: 246 VTGQLGNWLVEQQSHVLPGQALLTVIDLSQYEAELSIPESYARDLLAGQAVEVQLGRQQL 305
Query: 298 ELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQST 357
++ + PEVRD + F+ +R Q + L + ++I +G F S
Sbjct: 306 RGAISYIAPEVRDNQVSARVRFSEADSSQLRQSQRVTARVVLEHKEDVLMIARGDFVSSG 365
Query: 358 GGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
GG + + D +A R+ +++G + Q+ E+LEG GE+ VIS+ +K +
Sbjct: 366 GGREAYQVIDD--QAVRKPVQLGALSVQWVEILEGGTEGEQWVISNLSEFKGQD 417
>gi|88859559|ref|ZP_01134199.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
gi|88818576|gb|EAR28391.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
Length = 416
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 78/334 (23%), Positives = 149/334 (44%), Gaps = 14/334 (4%)
Query: 76 LSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTME 135
LS + VQE V++ GA V +IVRL N L Q+ NA+ ELA+ + LR +
Sbjct: 75 LSAKTAATVQEIVLKPGAIVAADSVIVRLDNPELQQQLDNAKQELAKLRANLRQLTLNNT 134
Query: 136 QDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDF-------LQAKEDYELVQQ 188
++ L Q++ + + + L + +++ ++ Q K+ E+ +Q
Sbjct: 135 REVLNETATFAQINAEYENAKLNLAAETTLMKQGVVSSLNYQRSILNEAQLKQRLEIAKQ 194
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVV 248
+ A+ ++ +HQ++ ++ + L N + L ++L VR+ G L L V
Sbjct: 195 R-AVQLKAVHQEAENIQLEWINQQQGLVNTAKRKL------DSLTVRAGFAGVLQNLAVE 247
Query: 249 LGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEV 308
LGQ+++PGQ+I I + + ++ +D+V G A + + V ++ P V
Sbjct: 248 LGQSLAPGQEIALIGSTKELIALINVSQNQVDQVAVGQAVEVDTRLAKVMGQVTRINPVV 307
Query: 309 RDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKD 368
+ + + P+N R N+ + T I + +S ++ +D
Sbjct: 308 INNTVEVEVSLPEQLPENARPQLNIDANILVASLTNVRYIERPANIKSNSQAQLYRIDAA 367
Query: 369 GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
KA I GRQ ++ E+ +GLE +++IS
Sbjct: 368 QNKALLTDIEFGRQAGRFIEIKQGLELNSQLIIS 401
>gi|91202210|emb|CAJ75270.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 336
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 7 KKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDG 66
KKK + LP ++G + +L WM G V E + V G
Sbjct: 8 KKKIVLLMLLPIVIGIVIYLYAESWM------------------GRVKDE-----IDVSG 44
Query: 67 QVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNL 126
++ +T V +S G V+E++V+EG V G II RL ++ L ++L AE+ + +
Sbjct: 45 NIE-VTDVAVSFRISGWVEERLVDEGETVSAGQIIARLESTELAQEVLLYRAEVNAARAV 103
Query: 127 LRNTQV---TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDY 183
+ T E + + ++DLD R Y++QE+LY EK+I+ +F AK DY
Sbjct: 104 FEELETGYRTEEIEEWEAVVRRTRVDLD--RLAADYKRQERLYAEKIISTSEFDAAKADY 161
Query: 184 ELVQQKHALIIERLHQ-DSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGEL 242
+ + ++ + +RL R ++D+ +L R + L + R ++S I G +
Sbjct: 162 DAEEARYREVNKRLVLFKKGPRKEKIDKARADLQRTRAALRLAKTRLGYTTIKSSISGIV 221
Query: 243 GLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG 285
+V G+ VSPG + I +L+D + A I+E + R+K G
Sbjct: 222 LSKNVEPGEYVSPGTPVVIIGNLNDIWLRAYINETDLGRIKVG 264
>gi|78187549|ref|YP_375592.1| Secretion protein HlyD [Pelodictyon luteolum DSM 273]
gi|78167451|gb|ABB24549.1| Secretion protein HlyD [Pelodictyon luteolum DSM 273]
Length = 360
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 96/392 (24%), Positives = 160/392 (40%), Gaps = 77/392 (19%)
Query: 19 IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSP 78
I G F+L V +++ T+ VDA V + + V G V+ V LS
Sbjct: 13 IALGALFILTVTYLLL--KGGTVEVDAV-----RVEYRELVQAVYATGYVEADAVANLSA 65
Query: 79 EEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDR 138
E G V EG V G I+ + + + A A L E++ +++ +
Sbjct: 66 EYSGTVSFIGAREGEMVEAGQSILSFESPRPEFAVKEARAALREQEAAMKDAE------- 118
Query: 139 LRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK----EDYELVQQKHALII 194
LD +R+ E L+ E ++R+DF +A+ + EL QK
Sbjct: 119 -----------LDFSRK-------ENLFREGAVSRQDFDRAEKVRVQARELKSQKE---- 156
Query: 195 ERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVS 254
++ +ED+L + L VR+ G L L DV G VS
Sbjct: 157 -----------FRLKMVEDDL--------------KKLTVRAPFRGVLTLQDVKTGDYVS 191
Query: 255 PGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATF------ERQGGNFELSVRKVYPEV 308
G + + D S Y + IDE + R++ G A ER+ F SV +V P
Sbjct: 192 SGTLVATVVDTSGYAVVVEIDELDVPRIRPGQKAAVVFDAYPERR---FSASVSRVVPMT 248
Query: 309 RDGKFRTDFVFTGERPDN-IRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDK 367
+ + P ++ G T N+ +++++PKG+ F+ ++++ LD+
Sbjct: 249 DRVTKTSKIYLVADMPKGAVQGGMTATANIIYNVKQKALLVPKGSVFRDGADSYVWKLDE 308
Query: 368 DGKKAYRRKIRIGRQNPQYYEVLEGLEAGERV 399
+ ++ IRIG + Y EVLEGL+ G+ V
Sbjct: 309 G--RLRKQPIRIGASDLTYVEVLEGLKDGDLV 338
>gi|119775997|ref|YP_928737.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
gi|119768497|gb|ABM01068.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
Length = 418
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 18/303 (5%)
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLD--LDITR-----RQRTYRQQEKLYDEKLIA 172
LA++Q L + +E+ L + E+L LD R +R R+ + L ++LI+
Sbjct: 118 LAQEQARLAGLEGEVERATLSARREQLSARQVLDTARVELEAAERESRRGDLLIAKELIS 177
Query: 173 REDFLQAKEDYELVQQKHALIIERLHQD-SIYRSIQMDQMEDNLANMRRNVLLI---RER 228
R DF + K+DY+ Q L + Q+ ++ Q ++++ ++R L++ R +
Sbjct: 178 RIDFEKVKDDYKKAQ----LRFDHAEQEVALMADTQAFELKNKALELKRQQLVVDDLRRQ 233
Query: 229 KENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAA 288
L V + +DG +G +S GQ I + DLS ++ E + E Y D + G+A
Sbjct: 234 VAALEVTAPVDGIIGNWLTEQKARLSRGQAILTVVDLSAFEAELAVSESYADELGLGMAV 293
Query: 289 TFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIII 348
+ G ++ + PEV G+ T F +R Q + L +++
Sbjct: 294 ELDLGGVKTTGTLASISPEVSRGEVLTRVRFDNVDGLKLRQNQRLSARILLENLENVLMV 353
Query: 349 PKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
+G+F S GGN ++ + G A R I++G ++ + +VLEG EAG+ +IS + K
Sbjct: 354 RRGSFV-SDGGNHVYCI--KGDIASRTPIKLGARSVSHVQVLEGGEAGDEWIISGSDKMK 410
Query: 409 NSE 411
+E
Sbjct: 411 QAE 413
>gi|150379701|ref|ZP_01918798.1| efflux transporter, RND family, MFP subunit [Shewanella sediminis
HAW-EB3]
gi|150255115|gb|EDM92812.1| efflux transporter, RND family, MFP subunit [Shewanella sediminis
HAW-EB3]
Length = 420
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 73/333 (21%), Positives = 152/333 (45%), Gaps = 12/333 (3%)
Query: 88 VVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQ 147
+ + G +V +GD++ + + L + EA L ++ L ++ + +L+ +
Sbjct: 94 LAKPGDRVEKGDVVATIESHKLTNSLKQQEALLEGMKSALERARLDARRQQLKAQQTIDM 153
Query: 148 LDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQ--QKHALIIERLHQDSIYRS 205
+D+ R R+ ++L KLI++ DF + K+D + HA L +D++
Sbjct: 154 AKVDLAAADRESRRGDELIHNKLISKIDFEKGKDDLHKAKLLSAHAKQEAELMKDTLTFE 213
Query: 206 IQMDQMEDNLANMRRNVLLIRERKEN---LNVRSQIDGELGLLDVVLGQNVSPGQKIGQI 262
I+ + A + R L++ E + L++ + + G +G V+ Q I +
Sbjct: 214 IK-----NKAAEVNRQALVVTELERQVGALSIEAPVGGIIGNWLTDQKARVAQSQPILTV 268
Query: 263 NDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGE 322
DLS ++ E + E Y D + G+ + + PEVR+ + F +
Sbjct: 269 VDLSAFEAELAVPESYADELGLGMDVELSFGSVTLMGQLSSISPEVRNREVTARVRFEQD 328
Query: 323 RPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQ 382
++R Q + L +++ +G F + GG ++V+ G A + I++G +
Sbjct: 329 ERLHLRQNQRLSARVLLENRPNVLMVKRGAFVSTGGGREVYVM--SGDIAEQTSIQLGAR 386
Query: 383 NPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
+ + EVL+G +AG+ VISS + +K +E +++
Sbjct: 387 SMSHIEVLQGGKAGDVWVISSIQPFKKAEQVLV 419
>gi|150008585|ref|YP_001303328.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503]
gi|149937009|gb|ABR43706.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503]
Length = 470
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 158/333 (47%), Gaps = 21/333 (6%)
Query: 96 RRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRL--RNKTEKLQLDLDIT 153
++G V + L L +L+AE + ++ + + ++ ++Q R+ RNK ++++ L ++
Sbjct: 145 KKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKRLQLDQLRIQNRNKLSEMEMQLKVS 204
Query: 154 RRQRTYRQQEKLYDEKLI------AREDFLQAKEDY-----ELVQQKHALIIERLHQDSI 202
R + R++ +L +E+ + + Q + DY +L + + E+ D+
Sbjct: 205 RMELN-RKEVELRNERYLDSLGAGTTDKVRQVELDYNVSVLKLKEDEQKYENEKSLTDAD 263
Query: 203 YRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQI 262
Y+ ++D L R+++ + E+ +RS L ++ +G VS G ++ +
Sbjct: 264 YKVKELD-----LNIFRKSLAETKRTLEDAQIRSPRKAILTYVNNEVGAQVSQGSRVAIV 318
Query: 263 NDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGE 322
+DLS +KIE I + Y DR+ AG A + + V V P ++G +
Sbjct: 319 SDLSHFKIEGEIADTYGDRIAAGSKAVVKIGNDKLDGVVSDVTPLSKNGVISFTVQLEED 378
Query: 323 RPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQ 382
+RSG + + + + I +F+ G +FV+ +G + +RK+++G
Sbjct: 379 NHRRLRSGLKTDVYVMNAIKDDVLRISNASFYVGKGEYELFVV--NGDQLIKRKVQLGDS 436
Query: 383 NPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
N +Y EV+ GLE G+ VV+S S+K L L
Sbjct: 437 NFEYVEVVGGLEPGDEVVVSDMTSFKEKNKLKL 469
>gi|91794203|ref|YP_563854.1| Secretion protein HlyD [Shewanella denitrificans OS217]
gi|91716205|gb|ABE56131.1| Secretion protein HlyD [Shewanella denitrificans OS217]
Length = 419
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 91/395 (23%), Positives = 178/395 (45%), Gaps = 32/395 (8%)
Query: 31 WMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVE 90
W F + VDA + +T + G++ L E G+V +
Sbjct: 38 WASFSGDKAATSVDASELRFASLTRGTLVRDIATTGKIVAANAPILYSTEEGVVTLLSLP 97
Query: 91 EGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKL---- 146
G V G ++ + + NL ++L ++Q L + ++E+ +L + + L
Sbjct: 98 -GDDVALGQVVATIESPNL-------VSQLKQQQALHEGMKSSLERAKLDARRQTLLVSQ 149
Query: 147 QLDL---DITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQ--QKHALIIERLHQDS 201
LD+ D+ +R R+ ++L + KLI++ DF + K+D + KHA+ L +D+
Sbjct: 150 TLDMASVDLDAAERESRRGDQLIEAKLISKIDFEKGKDDLHKAKLIHKHAIEEVELLKDT 209
Query: 202 IYRSIQMDQMEDNLANMRRNVLLIRERKENLN---VRSQIDGELGLLDVVLGQNVSPGQK 258
+ +Q ++E + R L++ E + L+ +++ + G +G V ++P Q
Sbjct: 210 LSFELQNSELE-----VDRQALVVVELERQLDALQIKAPVAGIIGNWLVEQKARIAPSQP 264
Query: 259 IGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SVRKVYPEVRDGKFRTD 316
+ + DL+ ++ E + E Y D + GL E + GN L + + PEVR+ +
Sbjct: 265 LLTVVDLTAFEAELAVPEAYADEL--GLGMDVELKLGNVTLVGKLSSISPEVREREVSAR 322
Query: 317 FVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRK 376
F +R Q + L + +++ +G F + GGN ++ L G+ A +
Sbjct: 323 VRFENSDKLALRQNQRLSARVLLEHRPDVLMVKRGDFL-TRGGNSVYKL--QGELALLTE 379
Query: 377 IRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
I +G ++ EVL G E G+ VI+ E++K ++
Sbjct: 380 IELGARSMSQVEVLAGGEEGDVWVITGSEAFKQAD 414
>gi|153808633|ref|ZP_01961301.1| hypothetical protein BACCAC_02931 [Bacteroides caccae ATCC 43185]
gi|149128955|gb|EDM20172.1| hypothetical protein BACCAC_02931 [Bacteroides caccae ATCC 43185]
Length = 415
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 95/407 (23%), Positives = 181/407 (44%), Gaps = 16/407 (3%)
Query: 7 KKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRV--DARGISIGHVTHEQFNDFVRV 64
++K KK + Y G+A +++V +I S +RV + + + V V
Sbjct: 10 RQKERNKKIIRYSAIGVAGVIVVSVLI-----SLMRVGVEEKDLVFSTVDKGVIEVSVSA 64
Query: 65 DGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQ---ILNAEAELA 121
G+V P ++ + E + G V G I++L + + Q +L+ E
Sbjct: 65 SGKVVPAFEEIINSPINSRILEIYKKGGDSVEIGTPILKLDLQSTETQYQKLLDEEQMRR 124
Query: 122 EKQNLLR-NTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
K + LR N+Q + ++ K ++L +R + R + L + QA+
Sbjct: 125 YKLDQLRVNSQTKLSDMAMQIKVSAMKL----SRMKVELRNEHYLDSLGAGTTDKVRQAE 180
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
Y + Q ++ + ++ + + ++ E + R+++ ++ E+ +RS
Sbjct: 181 LSYNVAQLEYEQLQQQFKNEQEVAAAELKVQELDFNIFRKSLAEMKRTFEDAQIRSPRKA 240
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
L ++ +G +S G+++ I+DLS +K+E I + Y DRV AG A + E +
Sbjct: 241 ILTFINNQIGAQISQGEQVAVISDLSHFKVEGEIADTYGDRVSAGGKAIVKIGSDKLEGT 300
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
V V P ++G + +RSG + + + + I G+F+ G
Sbjct: 301 VSSVTPLSKNGVISFSVQLKEDNHRRLRSGLKTDVYVMNAVKEDVMRIANGSFYVGRGEY 360
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESY 407
+FV D D + +RK+++G N +Y EVL GL+ G+RVV+S SY
Sbjct: 361 ELFVCDSD-SELVKRKVQLGDSNFEYVEVLSGLKLGDRVVVSDMNSY 406
>gi|156108152|gb|EDO09897.1| hypothetical protein BACOVA_04274 [Bacteroides ovatus ATCC 8483]
Length = 415
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 98/416 (23%), Positives = 183/416 (43%), Gaps = 22/416 (5%)
Query: 7 KKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLR--VDARGISIGHVTHEQFNDFVRV 64
++K KK + Y G+A ++ +G +I S LR V+A+ + V V
Sbjct: 10 RQKERNKKIIRYSSIGVASIIAIGVLI-----SVLRAGVEAKDLVFSTVDKGVIEVSVSA 64
Query: 65 DGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQ 124
G+V P ++ + E + G V G I++L DLQ E + +
Sbjct: 65 SGKVVPAFEEIINSPINSRIIEVYKKGGDSVDVGTPILKL-----DLQSTEIEYKKLLDE 119
Query: 125 NLLRNTQVTMEQDRLRNKTEKLQLDLDI-------TRRQRTYRQQEKLYDEKLIAREDFL 177
+R Q ++Q R+ N+T+ + + I +R + R + L +
Sbjct: 120 EQMR--QYKLDQLRVNNQTKLSDMAMQIKVSAMKLSRMKVELRNEHYLDSLGAGTTDKVR 177
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
QA+ Y + Q ++ + ++ + + ++ E + R+++ + ++ +RS
Sbjct: 178 QAELSYNVAQLEYEQLQQQYKNEKEVAAAELKVQELDFNIFRKSLSEKKRTLDDAQIRSP 237
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNF 297
L ++ +G +S G ++ I+DLS +K+E I + Y DRV AG A +
Sbjct: 238 RKAILTYINNQIGAQISEGGQVAIISDLSHFKVEGEIADTYGDRVAAGGKAIVKIGSDKL 297
Query: 298 ELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQST 357
E +V V P ++G + +RSG + + + + I G+F+
Sbjct: 298 EGTVSSVTPLSKNGVISFTVQLKEDNHRRLRSGLKTDVYVMNAVKEDVMRIANGSFYVGR 357
Query: 358 GGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEIL 413
G +FV + D + +RKI++G N +Y EVL GL+ G++VV+S +YKN L
Sbjct: 358 GEYELFVCNSD-NELVKRKIQLGDSNFEYVEVLSGLQPGDKVVVSDMSAYKNKNKL 412
>gi|118071791|ref|ZP_01539984.1| efflux transporter, RND family, MFP subunit [Shewanella woodyi ATCC
51908]
gi|118023695|gb|EAV37506.1| efflux transporter, RND family, MFP subunit [Shewanella woodyi ATCC
51908]
Length = 420
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 73/334 (21%), Positives = 158/334 (47%), Gaps = 14/334 (4%)
Query: 88 VVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQ 147
+ + G +V GD++ + + L + EA L Q+ L ++ +++L+ +
Sbjct: 94 LAKPGDKVELGDVVATIESHQLTNSLKQQEALLEGMQSSLERARLDARREQLKAQQTLDM 153
Query: 148 LDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDS-IYRSI 206
+D+ R R+ ++L + KLI++ DF + K+D K L+ Q++ + R
Sbjct: 154 AKVDLEAADRESRRGDELIENKLISKIDFEKGKDDL----HKAKLLSAHAQQEAELTRDT 209
Query: 207 QMDQMEDNLANMRRNVLLIRERKEN---LNVRSQIDGELGLLDVVLGQNVSPGQKIGQIN 263
++++ + + R L++ E + LN+++ + G +G + Q I +
Sbjct: 210 LAFEIKNKASEVNRQKLVVSELERQVAALNIKAPVGGIIGNWLTEQKARIGQSQPILTVV 269
Query: 264 DLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SVRKVYPEVRDGKFRTDFVFTG 321
DLS ++ E + E Y D + GL E + G L + + PEVR+ + F
Sbjct: 270 DLSAFEAELAVPESYADEL--GLGMDVELKFGELTLMGELSSISPEVRNREVTARVRFEQ 327
Query: 322 ERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGR 381
+ ++R Q + L +++ +G F + GG ++ + +G A + +I++G
Sbjct: 328 DDRLHLRQNQRLSARVLLENRPNVLMVKRGAFVSTGGGREVYTM--NGDIAEQTEIQLGA 385
Query: 382 QNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
++ + EVL+G +AG+ VISS + + ++ +++
Sbjct: 386 RSMSHIEVLQGGKAGDIWVISSVQPFNQAQQVLV 419
>gi|88857561|ref|ZP_01132204.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
gi|88820758|gb|EAR30570.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
Length = 419
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 100/431 (23%), Positives = 187/431 (43%), Gaps = 31/431 (7%)
Query: 1 MDIQLEKKKGIRKKHLPYI-VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFN 59
MDIQL KK I K + + +G + G + + AS+ V I I V F
Sbjct: 1 MDIQLAKKSSINFKKIAVVFIGCVVVASAYGAKHYLSDASSW-VAQDKIRIATVEQGTFA 59
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
VR G+++ + +S G V + + + G V+ GDII L+N L+ ++ A
Sbjct: 60 INVRGLGKLKTDQIYFVSTPVQGKVSQILRKAGNIVQEGDIIAVLTNPQLNEALIQA--- 116
Query: 120 LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDE--KLIAREDFL 177
Q+LL T + D + + L ++ I + Y+ + D KLI+ +
Sbjct: 117 ----QSLLAKTNAQNKADLAQLGAQLLDVEASIVAAELDYQANQLELDAQTKLISTGNST 172
Query: 178 QAKEDYE-------------LVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLL 224
+K DY+ L+QQK + HQ+ I Q N+ ++ +V+
Sbjct: 173 VSKIDYQRTEFAVKRSKNNWLIQQKRLI----KHQEKI--DAQAAAQHANIDALQADVIR 226
Query: 225 IRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKA 284
++ NL V++ + G + + + LGQ + +I +I D + E +DE ++
Sbjct: 227 HQQNINNLVVKAPVAGIVQAMPLALGQALMQSDEIAKIADSTRLLAEIQVDELQAGLIEL 286
Query: 285 GLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTE 344
G T + + F+ SV ++ P V +G+ D + P R + + +
Sbjct: 287 GQHVTLDTRQSQFKGSVSRIDPRVINGQVTIDVLPDEALPSEARPDLSVEGVISIVSVAN 346
Query: 345 SIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSY 404
S+ I ++ + F+++ +G A ++ GR + + E+ GL AG++++IS
Sbjct: 347 SLFIRTPRDARANKTSMQFLVEPNGHLASATEVEFGRMSVNHIEIKSGLSAGQKLIISDI 406
Query: 405 ESYK-NSEILI 414
+ + +ILI
Sbjct: 407 APFTAHQQILI 417
>gi|154490990|ref|ZP_02030931.1| hypothetical protein PARMER_00907 [Parabacteroides merdae ATCC
43184]
gi|154088738|gb|EDN87782.1| hypothetical protein PARMER_00907 [Parabacteroides merdae ATCC
43184]
Length = 442
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/336 (22%), Positives = 152/336 (45%), Gaps = 31/336 (9%)
Query: 96 RRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRL--RNKTEKLQLDLDIT 153
+RG V + L L + +AE E ++ + + + +EQ R+ NK +++++L ++
Sbjct: 116 KRGGDSVDVGTPILKLDLQSAETEYNKQLDEEQMKSLQLEQQRVTNHNKLSEMEMNLKVS 175
Query: 154 R----RQRTYRQQEKLYDEKLIARED------------FLQAKEDYELVQQKHALIIERL 197
R R+ + E+ D D L+ KED + + + AL
Sbjct: 176 RMELDRKAVELRNERYLDSLGAGTTDKVRQVELDYNVSILKLKEDEQKYKNEQALA---- 231
Query: 198 HQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQ 257
D + ++++ +LA RR + E+ +RS L ++ +G + G
Sbjct: 232 EADLKVKELELNIFRKSLAETRRTL-------EDAQIRSPRKAILTYVNNEIGSQIGQGA 284
Query: 258 KIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDF 317
K+ ++DLS +KIE I + Y DR+ AG A + + +V V P ++G
Sbjct: 285 KVAIVSDLSHFKIEGEIADTYGDRIAAGSKAVIKIGSEKLDGTVSDVTPLSKNGVISFTV 344
Query: 318 VFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKI 377
+ +RSG + + + + I +++ G +FV+ +G + +RK+
Sbjct: 345 QLEEDNHKRLRSGLKTDVYVMNAVKDDVLRIANSSYYVGKGEYELFVV--NGNQLLKRKV 402
Query: 378 RIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEIL 413
++G N +Y EV+ GL+ G++V++S +YK+ L
Sbjct: 403 QLGDSNFEYVEVVSGLQEGDQVIVSDMNAYKDKNKL 438
>gi|86140725|ref|ZP_01059284.1| membrane fusion efflux protein, putative [Flavobacterium sp.
MED217]
gi|85832667|gb|EAQ51116.1| membrane fusion efflux protein, putative [Leeuwenhoekiella
blandensis MED217]
Length = 419
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 100/421 (23%), Positives = 176/421 (41%), Gaps = 97/421 (23%)
Query: 30 GWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVV 89
GW FG V+ + I++ V + V G++QP T V++S E G + E V
Sbjct: 27 GW--FGKTGEFKPVETQEIALATVV-----ETVAATGKIQPETEVKISSEVSGEIIELPV 79
Query: 90 EEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLD 149
EG QV +GD++VR+ N DL ++ L + Q L+N + Q K K
Sbjct: 80 VEGQQVEKGDLLVRI---NPDL----IQSALTQAQASLQNVKANQAQSEAALKVAKAN-- 130
Query: 150 LDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMD 209
Y + +KL+++ +I+R ++ Q+ DYE+ Q ++ + + + ++
Sbjct: 131 ---------YERNQKLFEKGVISRSEWDQSISDYEIAQAN----VKSAYYNVQSAAANVN 177
Query: 210 QMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIG-----QIND 264
Q DNL+ ++ + I G + LDV LG+ V Q++ ++ D
Sbjct: 178 QSRDNLSRT--------------SIYAPISGTISKLDVELGERVVGTQQMAGTEMMRVAD 223
Query: 265 LSDYKIEALIDEHYIDRVKAGLAATFE--------------------------RQGGNFE 298
L + ++E ++E+ I ++ G + E Q NF+
Sbjct: 224 LGNMEVEVDVNENDIVKINIGDSTRVEVDAYLKKRFRGEVTEIANSAESNLTADQVTNFK 283
Query: 299 LSVR---KVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTF-- 353
+ VR + Y ++ +GK E R G T +++ + E+I +P
Sbjct: 284 VKVRILEESYKDLTEGK--------PEAYSPFRPGMTATVDIITNRANEAISVPISAIVI 335
Query: 354 --------FQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYE 405
F T +FV K G KA ++I+ G Q+ V EGLE G+ V+ Y
Sbjct: 336 KNDTASVGFGETQYEAVFV--KSGDKAALKRIKTGIQDDSNIVVSEGLEVGDEVITGPYN 393
Query: 406 S 406
+
Sbjct: 394 T 394
>gi|34540125|ref|NP_904604.1| efflux transporter, MFP component, RND family [Porphyromonas
gingivalis W83]
gi|34396437|gb|AAQ65503.1| efflux transporter, MFP component, RND family [Porphyromonas
gingivalis W83]
Length = 416
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 83/383 (21%), Positives = 166/383 (43%), Gaps = 21/383 (5%)
Query: 43 VDARGISIGHVTHEQFNDFVRVDGQVQP-ITVVQLSPEEGGIVQEKVVEEGAQVRRGDII 101
+ A + +G V + G+V P + SP + ++ + G V RG+ +
Sbjct: 43 ISAASLRLGRVDKGEVQIATSASGEVVPAFEEIITSPVQARLIA-VLKHAGDSVHRGEPL 101
Query: 102 VRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDI----TRRQR 157
+ L DLQ + E E + + ++ TQ+ ++ +LR + + +L + R+R
Sbjct: 102 LEL-----DLQSVRTEFEKLQDELRMKQTQLHRQEVQLRGELNAKRRELKVKAMQNDRRR 156
Query: 158 TYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL----IIERLHQDSIYRSIQMDQMED 213
Q E+ D D ++ + EL + AL ++E L + +
Sbjct: 157 AELQSERYLDSIGAGTTDKVR---EIELANRVAALEYEGMVENLRDREATAAAEQATARL 213
Query: 214 NLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEAL 273
+ R+ + R + ++ + S DG L + +G + G ++ ++D ++I+A
Sbjct: 214 EIEIFRKTLEEKRRQLDDARIASPRDGVLTFVLSEVGTLIGAGSQVATVSDPKHFRIQAD 273
Query: 274 IDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTY 333
I + Y R+ G A G E +V + P ++G R + + +RSG
Sbjct: 274 IADDYAQRLSVGAKAVVNLDGRRIEGTVTNITPAAKNGVVRFYVGLSADETYALRSGLKV 333
Query: 334 YINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGL 393
+ + E + IP G ++ G ++V + G RR++R+G + EV+ GL
Sbjct: 334 SVYVLTALRNECVRIPFGNYYHGEGLYEMYV--RRGSTLVRREVRLGGSGESFVEVMSGL 391
Query: 394 EAGERVVISSYE-SYKNSEILIL 415
E GE VV+ + + +++NS+ + L
Sbjct: 392 EPGEEVVLQTLDAAFRNSKKIKL 414
>gi|37520344|ref|NP_923721.1| hypothetical protein gll0775 [Gloeobacter violaceus PCC 7421]
gi|35211337|dbj|BAC88716.1| gll0775 [Gloeobacter violaceus PCC 7421]
Length = 448
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 89/414 (21%), Positives = 169/414 (40%), Gaps = 21/414 (5%)
Query: 8 KKGIRKKHLPYIVGGIAFLLLVGWMIFGN-HASTLRVDARGISIGHVTHEQFNDFVRVDG 66
KK R+ + I G + L W++FG R V E V G
Sbjct: 6 KKRDRRLNWLIIAGVVLAALTTAWLLFGRAEQPAERAQELARQTAPVVREDVVLSVSAAG 65
Query: 67 QVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNL 126
V+P+T V +SP++ G + V++G V++G ++ R+ N++L Q+L A+ LA Q
Sbjct: 66 IVKPLTPVNISPKQPGRLAALYVDQGQAVKKGQVLARMDNTDLQGQLLQAQGTLAAAQAN 125
Query: 127 LRNTQVTMEQDRLRNKTEKLQ-LDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYEL 185
LR Q +R + L+ + + + TY +L+ ++R ++ YE
Sbjct: 126 LRKLQAGNRTQEIRQAEQNLRDAEAQLIGARSTYESNAQLFASGAVSRNALDVSRSQYES 185
Query: 186 VQQKHALIIERLH-QDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGL 244
+Q + + ++ + +R +D + + I+ + + +R+ G +
Sbjct: 186 LQARIGALRQQADLSKAGFRPEDIDTARAQVLQAEGALKTIQTQVNDTAIRAPFAGVITQ 245
Query: 245 LDVVLGQNVSPGQKIGQINDLSDYKIEAL---------IDEHYIDRVKAGLAATFERQ-- 293
G V+P + + I A+ + E + + G + T +
Sbjct: 246 KFANPGSFVTPTTSASATSSATSSSILAMAGELEAVASVAESDVRNIYPGQSVTLQVDAY 305
Query: 294 -GGNFELSVRKVYPEVRDGKFRTDFVFTGE--RPDN--IRSGQTYYINLQLGQPTESIII 348
G +F+ VR V PE + T F PD ++SG ++G+ ++++I
Sbjct: 306 PGRSFKGQVRLVAPEAVVVQNVTSFEVRVRITDPDRRLLKSGMNLTAVFRVGERKDALLI 365
Query: 349 PKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
P G N +++ G+K + I IG +V+ GL G+RV I+
Sbjct: 366 PTTAVVSEAGRNGVYL--PGGEKPRFKPIEIGATVGTQTQVIGGLAEGDRVYIT 417
>gi|118756232|ref|ZP_01604013.1| efflux transporter, RND family, MFP subunit [Shewanella pealeana
ATCC 700345]
gi|118692286|gb|EAV98521.1| efflux transporter, RND family, MFP subunit [Shewanella pealeana
ATCC 700345]
Length = 420
Score = 75.9 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 76/353 (21%), Positives = 161/353 (45%), Gaps = 26/353 (7%)
Query: 74 VQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVT 133
V SPE+G + + + G +V G+++ + + L L ++Q +L + +
Sbjct: 82 VLYSPEQGSVTL--IAKPGDKVELGEVVATIESHKL-------TNSLKQQQAVLEGMKSS 132
Query: 134 MEQDRLRNKTEKLQ----LDL---DITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELV 186
+E+ RL + ++L+ LD+ D+ R R+ ++L + KLI++ DF ++K+D
Sbjct: 133 LERARLDARRQQLKAQQTLDMAKVDLEAADRESRRGDQLIESKLISKIDFEKSKDDL--- 189
Query: 187 QQKHALIIERLHQDSIYRSIQMD-QMEDNLANMRRNVLLIRERKEN---LNVRSQIDGEL 242
K L+ Q+++ + ++++ + R L+++E + LN+ + + G +
Sbjct: 190 -HKAKLLFAHAGQEALLMKDTLTFELKNTSLEVDRQALVVKELERQVAALNIIAPVAGII 248
Query: 243 GLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVR 302
G + Q I + DLS ++ E + E Y D + G+ +
Sbjct: 249 GNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGIGMVVELSFGSEKVMGELS 308
Query: 303 KVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWI 362
+ PEVR+ + F +R Q + L + +++ +G+F S GG +
Sbjct: 309 SISPEVRNREVSARVRFEQNDRLQLRQNQRLAARVLLEHRPDVLMVKRGSFVNSGGGQEV 368
Query: 363 FVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
+V+ G A + I++G ++ + EV+ G + G+ V SS E + + +I+
Sbjct: 369 YVM--HGDIAEQTPIQLGARSMSHIEVILGGQEGDIWVTSSIEPFNKAAQVIV 419
>gi|149276412|ref|ZP_01882556.1| ABC transporter permease [Pedobacter sp. BAL39]
gi|149232932|gb|EDM38307.1| ABC transporter permease [Pedobacter sp. BAL39]
Length = 416
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 74/353 (20%), Positives = 154/353 (43%), Gaps = 10/353 (2%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
+ G+V P L+ G ++ +++ GAQV+ G ++ L S + +
Sbjct: 62 INATGEVLPEFEEILTSPIQGALRNVLMDAGAQVKAGQSVLTLDKSAAQTEYEKLRFLIE 121
Query: 122 EKQNLLRNTQVTMEQD----RLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
KQN + ++ +++ R NK ++L+ I+ + E+L RED
Sbjct: 122 SKQNEINKLRLDLDKSFYDIRSNNKIKQLR----ISNFKDAVASAERLLKAGGGTREDVE 177
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
QA+ + + + + + + I++ + E +LA + + ++ + + +
Sbjct: 178 QAELNLSVAELEKQQLENEIRNKQQTMKIEIREAELSLAIQKNDGQALKRKLALAEIIAT 237
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNF 297
G + ++ +G ++S G+ + +I +LS YKI I ++ +DR+ G+ A
Sbjct: 238 RPGVITWVNKNIGASISEGESLVRIANLSSYKIAGSISDNLMDRLHTGMPAIVRINDVQL 297
Query: 298 ELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQST 357
V + P V + D T + +R + L ++ + I G F+ +
Sbjct: 298 RGQVMSISPSVSNAIGSFDVQLTEKNNKLLRPNMKVDVFLITNAHSKVLRITNGPAFKGS 357
Query: 358 GGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
+FV+ + KA RR ++ G N + E+L GL+AG+R++ S Y+ S
Sbjct: 358 DLQDVFVMQQG--KALRRTVKTGLSNFDFVEILSGLKAGDRIITSDMSKYEFS 408
>gi|110597863|ref|ZP_01386146.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
gi|110340588|gb|EAT59071.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
Length = 360
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 82/390 (21%), Positives = 168/390 (43%), Gaps = 69/390 (17%)
Query: 19 IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSP 78
I G+ F++ V ++I +T+ ++A G VT+ + + G V+ ++ L+
Sbjct: 13 IALGVLFVITVFFLI--TRGNTVDIEA-----GEVTNAELVQAIYATGFVEAESIANLNT 65
Query: 79 EEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDR 138
E G V +EG V+RG I+ + + A + +AE+ R ++ +++ R
Sbjct: 66 EFSGTVSHIGAKEGESVKRGQNIISFDSPQPQFAVSEARSSVAEQDAQARESRAQLKRKR 125
Query: 139 LRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLH 198
LY E I+R+D +A++
Sbjct: 126 -------------------------NLYHEGAISRQDLDEAEK----------------- 143
Query: 199 QDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLN---VRSQIDGELGLLDVVLGQNVSP 255
+S+Q D++ +++ L ++ R+++LN V++ DG L L +V G +
Sbjct: 144 -----KSVQADEL------LQQKALQLKMRQDDLNKLSVKAPFDGVLTLQNVKQGDYLPA 192
Query: 256 GQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATF---ERQGGNFELSVRKVYPEVRDGK 312
G + ++ D + Y I +DE I R++ G AT V ++ P+
Sbjct: 193 GTLVARVVDPAGYLISVEVDELDIPRIRNGQKATVVFDAYPDQRLSAVVSRIVPQTDKIT 252
Query: 313 FRTDFVFTGERP-DNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKK 371
+ T ++P I++G T N+ ++++ K + F+ N+++ ++K K
Sbjct: 253 KTSKIYLTIDKPAGTIQAGMTATANIIYNVRQNALLVRKSSVFEENHQNYVWKIEKGRLK 312
Query: 372 AYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
++ IR G + + EVL+GL+ G++V +
Sbjct: 313 --KQPIRQGASDLTFVEVLQGLKKGDKVAL 340
>gi|148358371|ref|YP_001249578.1| hypothetical protein LPC_0235 [Legionella pneumophila str. Corby]
gi|148280144|gb|ABQ54232.1| hypothetical protein LPC_0235 [Legionella pneumophila str. Corby]
Length = 399
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 90/409 (22%), Positives = 177/409 (43%), Gaps = 51/409 (12%)
Query: 13 KKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISI--GHVTHEQFNDFVRVDGQVQP 70
KK + Y + + F +V W F +H +GIS+ V ++ F ++ D + +
Sbjct: 9 KKLIGYFLAIVIFFSVVLW--FLSH--------QGISVERAKVKYDHFIQYIEDDAKTRA 58
Query: 71 ITVVQL-SPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRN 129
I + + SP G +++ + E G +V++ D+I + + L + A+ EL + L
Sbjct: 59 IKIYSIVSPVSGELLRINLTE-GDKVKKDDVIATIKSKIPALLDIRAKQELEHE---LGT 114
Query: 130 TQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQK 189
+ EQ K E ++ + + Q ++++E L + ++ + A+ +Y+L Q++
Sbjct: 115 AEALYEQ----AKAESIRAEAALETAQSDFKRKEPLAKKGFVSETELEHAQLEYQLRQKE 170
Query: 190 HALIIERLHQDSIY---RSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLD 246
H + +LH Y + E + A+ +++ + +RS + G + +
Sbjct: 171 HNAALRKLHAAEHYILKVKASLSASEGSEAS----------QQDKIEIRSPVTGSILRVI 220
Query: 247 VVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS--VRKV 304
V PG KI I D+ ++ A I ++ +R GG + L VR V
Sbjct: 221 EKSSTTVEPGTKIMDIADVVGLEVVADILSDDAAKIPPYARVIIKRWGGPYPLEGRVRIV 280
Query: 305 YP-----------EVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTF 353
P E + D E N+ G + + L + ++++P
Sbjct: 281 EPSGYTKISALGVEEQRVNVIIDITTPYELWKNLGDGYRVDVEIILFESNHALVVPMSAL 340
Query: 354 FQSTGGNW-IFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
F+ G +W +FV+ G +AY++K+ I NP Y + GLE G+ V++
Sbjct: 341 FRD-GEDWAVFVVK--GHRAYKKKLTIKYHNPDYAVIERGLELGDEVIL 386
>gi|118746818|ref|ZP_01594733.1| efflux transporter, RND family, MFP subunit [Geobacter lovleyi SZ]
gi|118680271|gb|EAV86754.1| efflux transporter, RND family, MFP subunit [Geobacter lovleyi SZ]
Length = 376
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 85/361 (23%), Positives = 145/361 (40%), Gaps = 40/361 (11%)
Query: 47 GISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSN 106
G+++ V + + V G V+ T +S G V V EG +VR+G ++
Sbjct: 38 GLTVTAVKVSDLPETLDVVGTVRARTSALVSARISGTVSVLHVREGDRVRKGQLL----- 92
Query: 107 SNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLY 166
+L K+NL + T D + E+ Q + T+ + ++LY
Sbjct: 93 -----------GQLDSKENLAQATGAVAAIDEAKRGLEEAQARQKLA--DSTFGRFKRLY 139
Query: 167 DEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIR 226
DE+ + R++F + + EL Q A RL Q + + +A+ + V I
Sbjct: 140 DEQALTRQEFDTRQTERELAHQAVARAEARLRQTQ-----EASRAAGAMADYTKIVAPI- 193
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG- 285
+ V Q D LG V PGQ + I+D Y++E I E + V AG
Sbjct: 194 ---SGIIVAKQAD---------LGSTVFPGQPLMTIDDEGSYQLELAIPESQVRAVHAGT 241
Query: 286 -LAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTE 344
+ + G +F V +V P D RT +RSG ++ LG +
Sbjct: 242 PVQVQIDATGSSFSTRVTEVVPS-SDPASRTYTAKVAVPQKGVRSGMFGRGSIALGSSVK 300
Query: 345 SIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSY 404
+ +P+ F+ ++ + D + R ++ GR E+L GL G+R+V +
Sbjct: 301 GVRVPRSAVFERGALTAVWSVGTD-EVIRMRLVKTGRIAGDSIEILSGLSDGDRIVTAGM 359
Query: 405 E 405
E
Sbjct: 360 E 360
>gi|119469565|ref|ZP_01612469.1| hypothetical protein ATW7_06898 [Alteromonadales bacterium TW-7]
gi|119447100|gb|EAW28370.1| hypothetical protein ATW7_06898 [Alteromonadales bacterium TW-7]
Length = 417
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 85/352 (24%), Positives = 158/352 (44%), Gaps = 30/352 (8%)
Query: 77 SPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQ 136
SPE G + V+ G V +GD + L + L EL ++Q++L+ + +++
Sbjct: 84 SPERGFVSLH--VKAGDTVTKGDELAVLHSPEL-------TNELKQQQSVLQRLEGELKR 134
Query: 137 DRLRNKTEKLQL-------DLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQ-- 187
L+++ + L L +++ QR R+ + + LI++ D +A +D Q
Sbjct: 135 QHLQSRRDTLTLTKTLDMASVELNAAQREDRRAKLSIKKHLISQIDLEKAIDDLSRAQLT 194
Query: 188 QKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE--RKEN-LNVRSQIDGELGL 244
KHA L +D++ +Q + +++ R L++ E RK N L++R+ + G +G
Sbjct: 195 YKHAQQEVALAKDTLAFELQAAK-----SDVERQQLIVDELHRKVNELSIRATVTGIVGN 249
Query: 245 LDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKV 304
L V V+ Q + + DLS ++ + + E Y + + G+ + + +
Sbjct: 250 LLVQQKAAVTQSQPLMTLVDLSHFEAQLQVPESYANELGLGMDVELKFGNETIMGVLSAI 309
Query: 305 YPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFV 364
PEV + + T F G +NIR Q + L + + +G F Q G I
Sbjct: 310 SPEVNNREVTTRVRFKGNS-NNIRQNQRLTARILLDNRQNVLQVKRGAFMQQGG---IIA 365
Query: 365 LDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILILS 416
DG A R I +G + E+L GL + ++ISSY + + L+L+
Sbjct: 366 YKIDGNFARRIPISVGATSINAVEILSGLNENDEIIISSYNQFNQVDTLLLN 417
>gi|29346946|ref|NP_810449.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|29338844|gb|AAO76643.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
Length = 415
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 92/417 (22%), Positives = 182/417 (43%), Gaps = 24/417 (5%)
Query: 7 KKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLR--VDARGISIGHVTHEQFNDFVRV 64
+ K KK + Y G+A ++++G +I S +R V+ + + + V V
Sbjct: 10 RNKERNKKIIRYSSIGVAGIVVIGVLI-----SVMRTGVEKKDLVLSTVDKGMIEVSVSA 64
Query: 65 DGQVQP-ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEK 123
G+V P + SP + ++VE R+G V + L L + + E E +
Sbjct: 65 SGKVVPAFEEIINSP-----INSRIVE---VYRKGGDSVEIGTPILKLDLQSTETEYKKL 116
Query: 124 QNLLRNTQVTMEQDRLRNKTEKLQLDLDI-------TRRQRTYRQQEKLYDEKLIAREDF 176
+ + ++Q R+ N+T+ + + I +R + R + L +
Sbjct: 117 LDEEQMRCYKLDQLRVNNQTKLSDMAMQIKVSAMKLSRMKVELRNEHYLDSLGAGTTDKV 176
Query: 177 LQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRS 236
QA+ Y + Q ++ + ++ + + ++ E + R+++ ++ ++ +RS
Sbjct: 177 RQAELSYNVAQLEYEQLQQQYKNEKEVAAAELKVQELDFNIFRKSLAEMKRTLDDAQIRS 236
Query: 237 QIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN 296
L ++ +G +S G ++ I+DLS +K+E I + Y DRV AG A +
Sbjct: 237 PRKAILTYINNQIGAQISQGGQVAIISDLSHFKVEGEIADTYGDRVAAGGKAVVKIGNDK 296
Query: 297 FELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQS 356
E +V V P ++G + +RSG + + + + + +F+
Sbjct: 297 LEGTVSSVTPLSKNGVISFTVQLKDDNNHRLRSGLKTDVYVMNAVKEDVMRMANASFYVG 356
Query: 357 TGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEIL 413
G +FV D + +RK+++G N +Y EV+ GL+ G+ VV+S SYKN L
Sbjct: 357 RGEYDLFVRTSD-DELVKRKVQLGDSNFEYVEVVSGLQPGDVVVVSDMSSYKNKNKL 412
>gi|118754846|ref|ZP_01602640.1| hypothetical protein SpeaDRAFT_3388 [Shewanella pealeana ATCC
700345]
gi|118693553|gb|EAV99775.1| hypothetical protein SpeaDRAFT_3388 [Shewanella pealeana ATCC
700345]
Length = 423
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 84/369 (22%), Positives = 155/369 (42%), Gaps = 13/369 (3%)
Query: 50 IGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNL 109
+ V + N + G+ P T ++ GG + E + G V G+II+ L+N L
Sbjct: 50 VSSVKNASLNITISGYGKFVPRTQRGINALSGGHIVEVFKKPGNLVEEGEIILSLNNPKL 109
Query: 110 DLQILNAE-----AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEK 164
L++L E A +Q ++ + +E R + + K++L L +K
Sbjct: 110 -LRLLETSELALLEEQANQQRVMAESAQELEDQRGKIRLAKVRLAL----ADAELIAHKK 164
Query: 165 LYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLL 224
L D ++I+ D +A +E + + R R D L + L
Sbjct: 165 LKDNQVISTLDLHKALVAWEQEDAMLQMELSRFQTLKKTRKAIEDSTRYRLEKAIKQQEL 224
Query: 225 IRERKENLNVRSQIDGELGLL--DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRV 282
+ E L+VR+ + G L L ++ +G++V G+ +G I DLS Y I + V
Sbjct: 225 LLSEVEQLDVRASMAGMLTELADELEIGRHVEEGRAVGMIADLSSYYARINITAADAEYV 284
Query: 283 KAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQP 342
L A + +G + V +V P V +G D F+G+ P +R + + +
Sbjct: 285 SPSLVAQVQFKGVEIKGLVSRVDPTVNNGSVEIDISFSGDLPAAVRPNIDVTARVDIAEH 344
Query: 343 TESIIIPKGTFFQSTGGNW-IFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
++++ + + +FVLD+ RR + +G +VL+GL G+ V++
Sbjct: 345 HNTLVVDRPVGVVRAHREYPMFVLDQTHSHFQRRHVLVGDIAGDQMQVLDGLYLGDTVLL 404
Query: 402 SSYESYKNS 410
+ + NS
Sbjct: 405 NVPKHLVNS 413
>gi|119356317|ref|YP_910961.1| efflux transporter, RND family, MFP subunit [Chlorobium
phaeobacteroides DSM 266]
gi|119353666|gb|ABL64537.1| efflux transporter, RND family, MFP subunit [Chlorobium
phaeobacteroides DSM 266]
Length = 363
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 93/405 (22%), Positives = 163/405 (40%), Gaps = 71/405 (17%)
Query: 13 KKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPIT 72
+K LP +A + V +T+ V+A G VT+ + + G V+
Sbjct: 5 QKVLPKYTIALALVFFVTVAYLLTRGNTVDVEA-----GEVTYAELVQAIYATGFVEAEA 59
Query: 73 VVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQV 132
V LS E G V EG QV G I+ L N+ + + A+A E+Q + N +
Sbjct: 60 VANLSSELSGTVNYIGALEGQQVTAGQTIISLDNAQPGISVREAQAAFLEQQAV--NQEK 117
Query: 133 TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK----EDYELVQQ 188
TM+ R RN L+ E +AR+D +AK + EL++Q
Sbjct: 118 TMKYSRARN-----------------------LFREGALARQDLDEAKRISSQAEELLEQ 154
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVV 248
K +Q+ ED L + + + + G L L V
Sbjct: 155 KR---------------LQLKSREDEL--------------KKIAITAPFAGVLTLQSVK 185
Query: 249 LGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG---GNFELSVRKVY 305
G V+ + ++ D S Y + IDE + R++ G AA ++ V ++
Sbjct: 186 KGDYVTANMLVARVVDTSKYVVSVEIDELDVPRIRPGQAAVVVLDALPTERYDAVVSRIV 245
Query: 306 PEVRDGKFRTDFVFTGERP--DNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIF 363
P+ D +T V+ R I++G T N+ ++++ K + F ++++
Sbjct: 246 PQT-DTITKTSRVYLTFRKAVTGIQAGMTITANIVYHIKPHTLLVRKSSVFDDNHKSYVW 304
Query: 364 VLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
++K K ++ I G + + EVL GL+ G+RV + E ++
Sbjct: 305 EIEKG--KLKKQLIVTGASDLTFVEVLSGLQQGDRVALLPEERFR 347
>gi|145220284|ref|YP_001130993.1| efflux transporter, RND family, MFP subunit [Prosthecochloris
vibrioformis DSM 265]
gi|145206448|gb|ABP37491.1| efflux transporter, RND family, MFP subunit [Prosthecochloris
vibrioformis DSM 265]
Length = 367
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 91/397 (22%), Positives = 165/397 (41%), Gaps = 69/397 (17%)
Query: 19 IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSP 78
I G FLL V ++I +R ++ + G V +++ V G V+ +V LS
Sbjct: 13 IALGALFLLTVAYLI-------VRGNSIEVESGEVRYQELVQAVYATGFVEATSVASLSA 65
Query: 79 EEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDR 138
E G + EG VR+G I+ + + A A LAE++ L++ ++
Sbjct: 66 EYSGTIDFVGAREGEAVRKGQKILSFQSPRPVFAVSEARAALAEQRAALKDAELN----- 120
Query: 139 LRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLH 198
Y ++ L+ + ++R+D A++ + +E L
Sbjct: 121 --------------------YARKSNLFGQGAVSRQDVDGAEKSRDQA-------VEMLR 153
Query: 199 QDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQK 258
Q R ++ +ED+L L VR+ G L L DV G VS G
Sbjct: 154 Q----REFRLRMVEDDLGK--------------LTVRAPFAGMLTLQDVKKGDYVSAGTV 195
Query: 259 IGQINDLSDYKIEALIDEHYIDRVKAGLAATF------ERQGGNFELSVRKVYPEV-RDG 311
+ + D + Y I +DE + RV+ G A ER+ F V +V P R
Sbjct: 196 VATVVDTTGYVISVEVDELDVPRVRVGQKAVIAFDAWPERR---FSSVVSRVVPMTDRVT 252
Query: 312 KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKK 371
K ++ + D I+ G T N+ + ++++ KG+ F+ +G ++++ + + K
Sbjct: 253 KTSKVYLTPTDTLDLIQEGMTATANIVYNVKSRALLVRKGSVFKESGRSFVWGIVEGRLK 312
Query: 372 AYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
++ I G + + EV+ GL G+RV + E ++
Sbjct: 313 --KQPIATGASDLAFVEVVGGLREGDRVALVPEERFR 347
>gi|126736695|ref|ZP_01752434.1| efflux transporter, RND family, MFP subunit [Roseobacter sp. CCS2]
gi|126713810|gb|EBA10682.1| efflux transporter, RND family, MFP subunit [Roseobacter sp. CCS2]
Length = 366
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 82/369 (22%), Positives = 151/369 (40%), Gaps = 44/369 (11%)
Query: 45 ARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRL 104
A G+ + V + V V +V ++ G V+ +V G++V GD++V L
Sbjct: 24 AAGVGVQEVEMRALAETVPVFAEVTTARDGNVAGRVAGNVERVIVLAGSRVAEGDLLVEL 83
Query: 105 SNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEK 164
++ L +Q+ +EA+LAE +E R R ++ LD R + Q +
Sbjct: 84 NDDLLTIQVAQSEAQLAE-------AAAGIETARARVDRARIGLDRIEALRGGSSFSQGR 136
Query: 165 LYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLL 224
D A+ DFL+A+ + Q + RL +
Sbjct: 137 FDD----AQADFLEAEAQFVEAQAREKSAQSRLAE------------------------- 167
Query: 225 IRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKA 284
R + E +R+ G + ++ + G + G + ++ D ++++A + Y +
Sbjct: 168 TRYQLERSKIRAPFSGVVLEVNTIPGAFIQAGTPVVRLLDTDAFEVQANVPSRYTSFLSP 227
Query: 285 GLAATFERQ-GGNFELSVRKVYPEVRDGKFRTDFV-FTGERPDNIRS---GQTYYINLQL 339
G T + G L +R V P + + RT V F+ ++ + GQ+ + + +
Sbjct: 228 GQMVTASTEFGTELTLQLRAVLP-IENPSTRTRAVLFSAPALSDLSTAAVGQSLTVEIPV 286
Query: 340 GQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERV 399
G+ E + +PK Q GG +FV D +A R + +G YEV+ GL G+ V
Sbjct: 287 GEAREVLSVPKDALVQGRGGWTVFVAADD--QAQPRPVTLGVPLGDRYEVVSGLAPGDLV 344
Query: 400 VISSYESYK 408
V+ E +
Sbjct: 345 VVRGNERLR 353
>gi|86132021|ref|ZP_01050617.1| membrane fusion efflux protein, putative [Cellulophaga sp. MED134]
gi|85817355|gb|EAQ38535.1| membrane fusion efflux protein, putative [Dokdonia donghaensis
MED134]
Length = 426
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 87/398 (21%), Positives = 166/398 (41%), Gaps = 103/398 (25%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G++QP V+LS E G + + ++EG V++GD++V+++ + Q+ ++A L
Sbjct: 52 VAATGKIQPEIEVKLSSEVSGEIIDLPIKEGQDVKKGDLLVKINPDLVQAQVSQSQAALQ 111
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ L + T+ Q +L T+ + + L+D+ +I++ DF +A+
Sbjct: 112 NSRAGLSQAEATLNQAKL------------------TFERNKPLFDKGVISKADFERAES 153
Query: 182 DYELVQQKHALIIERLHQDSIYR----SIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
DY++ Q Q + Y + Q+ Q DNL R ++ R
Sbjct: 154 DYQIAQANR--------QSAFYNVQSVAAQVKQATDNLG--RTSIFAPR----------- 192
Query: 238 IDGELGLLDVVLGQNV-----SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFE- 291
DG + +L+V LG+ V G +I ++ +L + ++E ++E+ I +++ G + E
Sbjct: 193 -DGTISMLNVELGERVVGTAQMAGTEIVRVANLQNMEVEVDVNENDIVKIQVGDSTIVEV 251
Query: 292 -------------------------RQGGNFELSVR---KVYPEVRDGKFRTDFVFTGER 323
Q NF++ VR + Y ++ +GK T F
Sbjct: 252 DAYLKKKFAGVVTEIANSAQATLTADQVTNFKVKVRILEESYKDLLEGKKDTYSPF---- 307
Query: 324 PDNIRSGQTYYINLQ-------LGQPTESIIIPKGTFFQ----------STGGNWIFVLD 366
R G T +++ L P +I++ T ++ + V
Sbjct: 308 ----RPGMTATVDIITKKRNDILAAPISAIVVKSDTSATKRSSAIASDVTSDEKFECVFI 363
Query: 367 KDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSY 404
KDG A + + G Q+ E+L GLE G+ ++ Y
Sbjct: 364 KDGDTAKLKVVTTGIQDDSKIEILSGLEEGDEIITGPY 401
>gi|150004880|ref|YP_001299624.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
gi|149933304|gb|ABR40002.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
Length = 415
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 95/425 (22%), Positives = 184/425 (43%), Gaps = 37/425 (8%)
Query: 1 MDIQLEKK---KGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQ 57
MD ++ K+ K +KK + Y G+A ++ + +I +S R D + V +
Sbjct: 1 MDREIPKEVRDKERKKKFIKYGAIGVAAVVCIAVLISFMRSSVNRKD---LVFSEVDNGT 57
Query: 58 FNDFVRVDGQVQP-ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNA 116
V G+V P + SP + ++VE R+G V + L L + +
Sbjct: 58 IEVSVSASGKVVPAFEEIINSP-----INTRIVE---VYRKGGDSVDVGTPILKLDLQST 109
Query: 117 EAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDIT-RRQRTYRQQEKLYDEKLI---- 171
E E + + + + +EQ ++ N T L + + + R + +L +E+ +
Sbjct: 110 ETEYKKLLDEEQMKRYQLEQLKVNNNTYLSDLSMQVKISAMKLNRMEVELRNERYLDSLG 169
Query: 172 ---------AREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNV 222
A +F K + E ++Q++A + D + ++ + +LA M+R +
Sbjct: 170 SGTTDKVRQAELNFNTGKLELEQLRQQYANESKVKEADLKVKELEFNIFSKSLAEMKRTL 229
Query: 223 LLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRV 282
++ +RS L ++ +G V+ G ++ I+DLS +K+E I + Y DRV
Sbjct: 230 -------DDAQIRSPRKAILTYINNQVGAQVAEGSQVAIISDLSHFKVEGEIADTYGDRV 282
Query: 283 KAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQP 342
AG A + E +V V P ++G + +RSG + +
Sbjct: 283 AAGGRAIVKIGNEKLEGTVSSVTPLSKNGVISFIVQLNEDNNKRLRSGLKTDVYVMNAVK 342
Query: 343 TESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+ + +++ G +FV D + +RK+++G N +Y EV+ GL+ G++VV+S
Sbjct: 343 EGVLRLANASYYVGRGEYELFVQDSK-DEIVKRKVQLGDSNFEYVEVVSGLKPGDKVVVS 401
Query: 403 SYESY 407
SY
Sbjct: 402 DMSSY 406
>gi|71278458|ref|YP_267523.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
gi|71144198|gb|AAZ24671.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
Length = 418
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 87/432 (20%), Positives = 187/432 (43%), Gaps = 40/432 (9%)
Query: 1 MDIQLEK-KKGIRKKH---LPYIVGGIAFLLLVGWM----IFGNHASTLRVDARGISIGH 52
MDIQ E +K + KK+ LP F+LL+G + GN ++ ++ +
Sbjct: 1 MDIQREAVQKPLWKKYWFVLP------VFILLIGTYSLRNVLGN--ASYFIERSAVVTAK 52
Query: 53 VTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQ 112
V F VR G ++P+ + +S + G ++ +V+ GA+V +GD++V+LSN L
Sbjct: 53 VEQGDFRVNVRATGVLKPLNIRWVSSQVSGRAEQVLVKAGAKVNKGDVLVQLSNPELHRN 112
Query: 113 ILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEK--L 170
+ A EL K+ V +E ++ + L+ + + +Y+ + D + L
Sbjct: 113 LEKARWELEAKKAESHVAFVMLE-------SQMVDLENSVLSAEYSYQSAKLKLDAETAL 165
Query: 171 IAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMR----------- 219
+A+ + + +Y Q+ L +++ Q + + ++M+ N+A +
Sbjct: 166 LAQGNATVSALEY----QRSQLTVKQQMQYWRAQQQKTEKMKANMAATKIAQQARIGLVE 221
Query: 220 RNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYI 279
N ++E+ L VRS G + + + LG+ G + + D + E + E +
Sbjct: 222 NNYQRVQEQVAALQVRSSTSGVVQQVSLELGERAQVGDSVALVADQNTLFAELQVQEVRV 281
Query: 280 DRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQL 339
+ G T + + V ++ P V+ G D G+ P R T + +
Sbjct: 282 RDIALGQLVTIDTRTTEIIGEVTRIDPAVKSGMVLVDVKLIGDLPAEARPELTVDGLIAI 341
Query: 340 GQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERV 399
++ + + + ++ L +D + A + + +G+ + ++++GL G+ +
Sbjct: 342 SNIENALYVKRPVYAPRHTKVGLYKLSQDQQFASKYSVGLGQSSVNKIQIIDGLMLGDEI 401
Query: 400 VISSYESYKNSE 411
+IS S++ +
Sbjct: 402 IISDTSSWQEHQ 413
>gi|114567228|ref|YP_754382.1| Multidrug resistance efflux pump-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114338163|gb|ABI69011.1| Multidrug resistance efflux pump-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 392
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 74/327 (22%), Positives = 153/327 (46%), Gaps = 33/327 (10%)
Query: 84 VQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKT 143
V+E +V G +V G ++++LS+ L + +A ++LA + L+ + M+ RL K
Sbjct: 67 VRELLVASGDKVMPGQLLMKLSSPELTAETASARSQLARTEAELQAAGLKMQSLRLELK- 125
Query: 144 EKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIY 203
Q + D+ R++ L +AR ++ +A+ L +++L +
Sbjct: 126 ---QAENDLARKK-------NLLQSGALARAEYEEAE-----------LEVDQLRKTISQ 164
Query: 204 RSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQIN 263
+ + + +A++ + + E++ L V S + G + L V +GQ V+PG + Q+
Sbjct: 165 QEAGVSGLSQQVASLSEMLNGLEEKRGQLQVTSPVSGIILDLPVKVGQVVAPGTLLAQLG 224
Query: 264 DLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL---SVRKVYPEVRDG-------KF 313
+++ + I RVK G + E+ + K+YP + +
Sbjct: 225 SAGQLEVKTELLSDEIRRVKIGQSTRITAPVLGEEVLNGQISKIYPRAYEKTSALGVIQR 284
Query: 314 RTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAY 373
R + E+ N++ G + ++ + I++P+ + GN+ L K+G+ A
Sbjct: 285 RVPVIINLEQIANLQPGYEVRVAIETLRKEGVILLPRESVRLDEKGNYRLWLVKEGRIA- 343
Query: 374 RRKIRIGRQNPQYYEVLEGLEAGERVV 400
+R I++G +N Q+ EV++G++AGE VV
Sbjct: 344 QRSIQVGEKNQQWVEVIKGIKAGETVV 370
>gi|88857314|ref|ZP_01131957.1| hypothetical protein PTD2_02101 [Pseudoalteromonas tunicata D2]
gi|88820511|gb|EAR30323.1| hypothetical protein PTD2_02101 [Pseudoalteromonas tunicata D2]
Length = 418
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 93/431 (21%), Positives = 192/431 (44%), Gaps = 39/431 (9%)
Query: 2 DIQLEKKKGIRKKHLPY--IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFN 59
D+ ++K K + L IVGG+ V I N ++ L + + + V
Sbjct: 9 DVMVKKPKQTLRNSLIALAIVGGV---FAVSMNIEQNSSNALSIQTSKVQLATVLRGDLT 65
Query: 60 DFVRVDGQVQPITVVQL-SPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA 118
V +G++ Q+ SPE+G + + +V+ G +V G +I ++S+ L+
Sbjct: 66 RDVAANGRIVAANAPQVYSPEQGYV--DLLVQPGDKVSLGQVIAQVSSPELN-------N 116
Query: 119 ELAEKQNLLRNTQVTMEQDRLRNKTEKLQL-------DLDITRRQRTYRQQEKLYDEKLI 171
+L +++++L+ +E+ +L + + L L +++T R R+ + LI
Sbjct: 117 KLKQQESVLQRLSGELERQKLDARRQSLALTKTLDLAQVELTAADRESRRAHLSIAKSLI 176
Query: 172 AREDFLQAKEDYELVQQK----HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE 227
++ D L+A +D L + K HA L +D++ ++ Q E + R L++ E
Sbjct: 177 SQID-LEAADD-NLARAKLSFTHAEQEVLLAKDTLAFELKAAQSE-----VERQQLVVDE 229
Query: 228 RKE---NLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKA 284
NL++++ ++G +G V V+P Q + + DL+ ++ E + E Y + +
Sbjct: 230 LSRQVMNLDIKASVNGIVGNHLVQQKSAVAPSQALMTLVDLTAFEAELQVPESYANELGL 289
Query: 285 GLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTE 344
G+ + + + + PEV + T F + N+R Q + L
Sbjct: 290 GMDVELQIGAEHIVGKLSAISPEVSGREVTTRVRFNDQIDLNLRQNQRVSARILLENREN 349
Query: 345 SIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSY 404
+++ +G F Q G + A R +I G + E+ G++ G+ +++SSY
Sbjct: 350 VLMVKRGAFMQQGG---FIAYKVENNVATRIEIATGATSIAAVELSAGVKEGDTLIVSSY 406
Query: 405 ESYKNSEILIL 415
E + N++ ++L
Sbjct: 407 EQFANADNILL 417
>gi|126662947|ref|ZP_01733945.1| cation efflux system protein/acriflavin resistance protein B family
[Flavobacteria bacterium BAL38]
gi|126624605|gb|EAZ95295.1| cation efflux system protein/acriflavin resistance protein B family
[Flavobacteria bacterium BAL38]
Length = 387
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 80/377 (21%), Positives = 156/377 (41%), Gaps = 72/377 (19%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
++ V F ++ + G + + + PE G++ + V+ G V +G I+ R+ +
Sbjct: 75 VTTATVKDTMFTHYIDIQGNIDTKQNLIIYPEFAGVLNQVYVKAGQNVTKGQILARIDDG 134
Query: 108 NLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYD 167
L Q+ E TQ T+ + T+ +Q+ L+D
Sbjct: 135 GLSNQLAQME------------TQATLAKT--------------------TFERQKNLWD 162
Query: 168 EKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE 227
+K+ + FLQAK +YE + A QM+ +A
Sbjct: 163 QKIGSEIQFLQAKTNYEAQMKAVA------------------QMKAQVAKT--------- 195
Query: 228 RKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG-- 285
V++ G + + + GQ V+PGQ + +I +L+D + + I E +I ++K G
Sbjct: 196 -----TVKAPFSGVIDEVIIDKGQVVAPGQPLMRIVNLADMYVTSNIPESFIGKIKVGAF 250
Query: 286 LAATFERQGGNFELSVRKV--YPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPT 343
+ + G ++ VR+V Y + F + V +R Q + ++ +
Sbjct: 251 VDVYVKSIGKTYKGKVRQVGNYINPNNRNFSIE-VAVPNTDKLLRPNQVAVLKIEDYKKP 309
Query: 344 ESIIIPKGTFFQSTGG-NWIFVLDKDGK--KAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
+I++P+ ++ G I+ +D K KA ++ I++G + EV GL GE ++
Sbjct: 310 NAILVPESIVTENAAGEKIIYTIDSSSKEPKAVKKTIQVGLISGANIEVKSGLNKGEIII 369
Query: 401 ISSYESYKNSEILILSK 417
I S +N +I+ + K
Sbjct: 370 IDGARSVQNGDIVEIIK 386
>gi|60680939|ref|YP_211083.1| putative ABC transporter component protein [Bacteroides fragilis
NCTC 9343]
gi|60492373|emb|CAH07139.1| putative ABC transporter component protein [Bacteroides fragilis
NCTC 9343]
Length = 415
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 138/305 (45%), Gaps = 19/305 (6%)
Query: 109 LDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDE 168
LD +N++ +L++ ++ +++ + + ++ + E+ L + RQ E Y+
Sbjct: 127 LDQAKVNSQTKLSDMAMQIKVSEMKLARMKVELRNEQYLDSLGAGTTDKV-RQAELSYN- 184
Query: 169 KLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRER 228
+R + Q K+ Y +Q A ++ L D ++ LA M+R +
Sbjct: 185 --TSRLELEQLKQQYTNEKQIAAADLKVLELD-------LNMFRKGLAEMKRTL------ 229
Query: 229 KENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAA 288
++ +RS L ++ +G + G ++ I+DLS +K++ I + Y DRV AG A
Sbjct: 230 -DDAQIRSPRKAILTYINNQIGAQIPQGGQVAIISDLSHFKVDGEIADTYGDRVAAGGKA 288
Query: 289 TFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIII 348
+ E V V P ++G + +RSG + + + + I
Sbjct: 289 IVKIGSEKLEGIVSSVTPLSKNGVISFSVQLKEDNNKRLRSGLKTDVYVMNAVKEDVLRI 348
Query: 349 PKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
+++ G +FV+ D + +RKI++G N ++ EV+ GL G++VV+S +YK
Sbjct: 349 ANASYYVGRGEYDLFVMTSD-DEIVKRKIQLGDSNFEFVEVVSGLNPGDKVVVSDMTNYK 407
Query: 409 NSEIL 413
N L
Sbjct: 408 NKNKL 412
>gi|156858281|gb|EDO51712.1| hypothetical protein BACUNI_04260 [Bacteroides uniformis ATCC 8492]
Length = 415
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 71/319 (22%), Positives = 144/319 (45%), Gaps = 8/319 (2%)
Query: 96 RRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDI-TR 154
R+G V + L L + +AE + + + + ++Q +L N+T+ L + I
Sbjct: 89 RKGGDSVDVGTPILKLDLQSAETDYKKMLDEEQMRSYKLKQLKLDNQTKLTDLQMKIKVS 148
Query: 155 RQRTYRQQEKLYDEKLI------AREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQM 208
+ R + +L +E+ + + QA+ Y + Q ++ + ++ + + +
Sbjct: 149 AMKLDRMKVELRNEQYLDSLGSGTTDKVRQAELSYNVAQLEYEQLQQQYANEKEVLAAEY 208
Query: 209 DQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDY 268
E + + ++ + + ++ VRS L ++ +G V G +I I+DLS +
Sbjct: 209 QVQELDFSMFQKTLAETKRTLDDAQVRSPRKAILTYINNQIGAQVPEGSQIAVISDLSHF 268
Query: 269 KIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIR 328
K+E I + Y DRV AG A + E SV V P ++G + +R
Sbjct: 269 KVEGEIADTYGDRVAAGGKAIVKIGSEKLEGSVSSVTPLSKNGVISFTVQLNEDNNRRLR 328
Query: 329 SGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYE 388
SG + + + + I +++ G +FV + D K+ +RK+++G N ++ E
Sbjct: 329 SGLKTDVYVMNAVKEDVMRIANASYYVGRGEYELFVRNSD-KEIVKRKVQLGDSNFEFVE 387
Query: 389 VLEGLEAGERVVISSYESY 407
V+ GL+ G+ VV+S +Y
Sbjct: 388 VVSGLQPGDEVVVSDMSNY 406
>gi|83814818|ref|YP_444862.1| putative HlyD-like secretion protein [Salinibacter ruber DSM 13855]
gi|83756212|gb|ABC44325.1| putative HlyD-like secretion protein [Salinibacter ruber DSM 13855]
Length = 370
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 83/377 (22%), Positives = 148/377 (39%), Gaps = 82/377 (21%)
Query: 39 STLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRG 98
+ +RVDA + G VT +R G ++ V+L+ E G V + +EG +V G
Sbjct: 58 APMRVDATALQPGTVTER-----IRTSGTLRADESVELTAETAGKVTDIRFDEGDRVDEG 112
Query: 99 DIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRT 158
++VR++++ L E+DRL ++ L L R QR
Sbjct: 113 ALLVRINDAELQ-----------------------AEKDRLEHR-----LSLATDRAQR- 143
Query: 159 YRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANM 218
Q++L DE +++E++ D + + +
Sbjct: 144 ---QKELLDEGGVSQEEY--------------------------------DATVNEVEVL 168
Query: 219 RRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHY 278
R + L+ R +R+ G +GL +V G VSP I + K++ + Y
Sbjct: 169 RAELDLVEARIGKTQIRAPFSGVVGLREVSTGAYVSPQTTIATLQRTDPIKLDFSVSAQY 228
Query: 279 IDRVKAGLAATFERQG------GNFELSVRKVYPEVRDGKFRTDFVFTGERPDN-IRSGQ 331
RV+ G + TF +G G S +V + R + R PD +R G
Sbjct: 229 AARVQTGQSVTFRVRGLERTLEGTVYASNTQVSTDTRTLRLRA----RAPNPDGALRPGM 284
Query: 332 TYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLE 391
+ + LGQ T++I++P + G +FV + A R + +G + +V +
Sbjct: 285 FADVTVPLGQMTDAIVVPSFAVVPTLDGQRVFV--AENGVAQPRNVTLGVRTDSTVQVTD 342
Query: 392 GLEAGERVVISSYESYK 408
GL + V+ S + +
Sbjct: 343 GLSLRDTVITSGIQGLR 359
>gi|53712790|ref|YP_098782.1| ABC transporter permease [Bacteroides fragilis YCH46]
gi|52215655|dbj|BAD48248.1| ABC transporter permease [Bacteroides fragilis YCH46]
Length = 415
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/305 (22%), Positives = 138/305 (45%), Gaps = 19/305 (6%)
Query: 109 LDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDE 168
LD +N++ +L++ ++ +++ + + ++ + E+ L + RQ E Y+
Sbjct: 127 LDQAKVNSQTKLSDMAMQIKVSEMKLARMKVELRNEQYLDSLGAGTTDKV-RQAELSYN- 184
Query: 169 KLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRER 228
+R + Q K+ Y +Q A ++ L D ++ LA M+R +
Sbjct: 185 --TSRLELEQLKQQYTNEKQIAAADLKVLELD-------LNMFRKGLAEMKRTL------ 229
Query: 229 KENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAA 288
++ +RS L ++ +G + G ++ I+DLS +K++ I + Y DRV AG A
Sbjct: 230 -DDAQIRSPRKAILTYINNQIGAQIPQGGQVAIISDLSHFKVDGEIADTYGDRVAAGGKA 288
Query: 289 TFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIII 348
+ E V V P ++G + +RSG + + + + I
Sbjct: 289 IVKIGSEKLEGIVSSVTPLSKNGVISFSVQLKEDNNKRLRSGLKTDVYVMNAVKEDVLRI 348
Query: 349 PKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
+++ G +FV+ D + +RK+++G N ++ EV+ GL G++VV+S +YK
Sbjct: 349 ANASYYVGRGEYDLFVMTSD-DEIVKRKVQLGDSNFEFVEVVSGLNPGDKVVVSDMTNYK 407
Query: 409 NSEIL 413
N L
Sbjct: 408 NKNKL 412
>gi|54293172|ref|YP_125587.1| hypothetical protein lpl0218 [Legionella pneumophila str. Lens]
gi|53753004|emb|CAH14447.1| hypothetical protein [Legionella pneumophila str. Lens]
Length = 392
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 88/409 (21%), Positives = 180/409 (44%), Gaps = 45/409 (11%)
Query: 13 KKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISI--GHVTHEQFNDFVRVDGQVQP 70
KK + Y + + F +V W F +H +GIS+ V ++ F ++ D + +
Sbjct: 9 KKLIGYFLIIVIFFSVVLW--FLSH--------QGISVERAKVKYDHFIQYIEDDAKTRA 58
Query: 71 ITVVQL-SPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRN 129
I + + SP G +++ + E G +V++ D+I + + L + A+ EL + L
Sbjct: 59 IKIYSIVSPVSGELLRINLTE-GDKVKKDDVIATIKSKIPALLDIRAKQELEHE---LGT 114
Query: 130 TQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQK 189
+ EQ K E ++ + + ++++E L + ++ + A+ +Y+L Q++
Sbjct: 115 AEALYEQ----AKAESIRAEAALETAHSDFKRKEPLAKKGFVSETELEHAQLEYQLRQKE 170
Query: 190 HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVL 249
H + +LH Y + +++ +L+ + + +++ + +RS + G + +
Sbjct: 171 HNAALRKLHAAEHY----ILKVKASLSASEGSEAI---QQDKIEIRSPVTGSILRVIEKS 223
Query: 250 GQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS--VRKVYP- 306
V G KI I D+ ++ A I ++ +R GG + L VR V P
Sbjct: 224 STTVESGTKIMDIADVVGLEVVADILSDDAAKIPPYARVIIKRWGGPYPLEGRVRIVEPS 283
Query: 307 ----------EVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQS 356
E + D E N+ G + + L + ++++P F+
Sbjct: 284 GYTKVSALGVEEQRVNVIIDITTPYELWKNLGDGYRVDVEIILFESNHALVVPMSALFRD 343
Query: 357 TGGNW-IFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSY 404
G +W +FV+ G +AY++K+ I NP Y + GLE G+ V +S +
Sbjct: 344 -GEDWAVFVVK--GHRAYKKKLTIKYHNPDYAVIESGLELGDEVTLSQF 389
>gi|78356009|ref|YP_387458.1| Secretion protein HlyD [Desulfovibrio desulfuricans G20]
gi|78218414|gb|ABB37763.1| Secretion protein HlyD [Desulfovibrio desulfuricans G20]
Length = 405
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 84/361 (23%), Positives = 154/361 (42%), Gaps = 45/361 (12%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
++I V +F D + G ++ LSP+ G V +V+ G +V G+++++L +
Sbjct: 44 VTIASVVPHEFADEISAVGTLKARDTSPLSPKVAGTVSRVLVDIGERVNAGEVVIKLDRT 103
Query: 108 NLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYD 167
N DL + A A LA + + + EQ ++ YR+ +L
Sbjct: 104 NYDLGVKQARAALAAAEAAVPQAEAHFEQ------------------AEKEYRRAIELLK 145
Query: 168 EKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE 227
EK+I + F ++ ++ K A+ R +D +++ E
Sbjct: 146 EKVIPQSRFDASEAAFK--SAKEAVFYARAQRDQAKAALET----------------ALE 187
Query: 228 RKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLA 287
++ ++RS I G + +V +GQ V+PG ++ I D + ++ + E I R+ G
Sbjct: 188 HLKDADIRSPIGGAVVERNVEIGQAVAPGGRLLLIVDQTSLNLDVDLPEADIGRIVVGTV 247
Query: 288 ATFERQ---GGNFELSVRKVYPEVRDGKFRTDFVFTGERPD---NIRSGQTYYINLQLGQ 341
A G + V + P V D K RT F E P+ + G + L +
Sbjct: 248 ALITTDAFPGHEYSGKVTVINPLV-DRKTRT-FRMRIEVPNPSGKLVDGMYARVKLS-AE 304
Query: 342 PTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
S+ +P+ T + G +V +G KA++R + I + Q+ EV+ GL ++VV
Sbjct: 305 KRRSLAVPRETLQRLPGSGTYYVFVVEGNKAHKRTVEIRAMDDQFAEVMGGLVENDKVVT 364
Query: 402 S 402
S
Sbjct: 365 S 365
>gi|109897361|ref|YP_660616.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
atlantica T6c]
gi|109699642|gb|ABG39562.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
atlantica T6c]
Length = 354
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 15/242 (6%)
Query: 169 KLIAREDFLQAKE-DYELVQQKHALI-IERLHQDSIYRSIQMDQMEDNLANMRRNVLLIR 226
KL RE+ + E D L + K L I+ L Q S+ + +D+ E N+ ++ + + +
Sbjct: 97 KLSDREERARLNELDINLQEAKRQLKRIDNLAQKSVASAQLLDEQEANVKALKAQLEVAK 156
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
+ E L +R+ G LG+ V LG V PG I ++DL K++ I E ++ V+ G
Sbjct: 157 AQLEELELRAPFGGLLGVRQVSLGALVMPGDLIATLDDLHVIKMDFTIAESHLPSVRKGQ 216
Query: 287 ---AATFERQGGNFELSV----RKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQL 339
A + G FE + +V P R + R + +R G I+L+
Sbjct: 217 QVSATSVAYPGETFEGEISSIASRVDPVTRAIQIRA---IIDNKELKLRPGMLLQIHLE- 272
Query: 340 GQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERV 399
+ E++ IP+G ++FV++ + K R+++++G + P ++ GL+ GE+V
Sbjct: 273 KEILETLTIPEGALVPIEDKQFVFVIEDN--KVTRKEVKVGLRKPGIAQITSGLKEGEQV 330
Query: 400 VI 401
VI
Sbjct: 331 VI 332
>gi|83645035|ref|YP_433470.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
gi|83633078|gb|ABC29045.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
Length = 372
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 95/421 (22%), Positives = 160/421 (38%), Gaps = 100/421 (23%)
Query: 16 LPYIVGGIAFLLLVGWM---IFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPIT 72
L + GGI + L G++ + G + + + +S E++ F G V +
Sbjct: 12 LAVVFGGIFYFL--GYLKPKMMGEYFANFQPPPVTVSSESARTERWTPFYSSIGNVIAVQ 69
Query: 73 VVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLD---LQILNAEAELAEKQNLLRN 129
V ++ EE G+++ + GA+V GD++V+L ++++D ++ + A AELAE
Sbjct: 70 QVTVTSEEAGVIKSMPISSGAKVEAGDLLVQL-DTDVDVAEIKGMQASAELAEA------ 122
Query: 130 TQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQK 189
TY++ +KL + + + DF ++
Sbjct: 123 ----------------------------TYKRDQKLLERNVASSLDFETSRA-------- 146
Query: 190 HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVL 249
L N + V R R ++R+ G LG+ V L
Sbjct: 147 ------------------------QLKNAQAQVESQRARINKKSIRAPFKGTLGIRKVNL 182
Query: 250 GQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG------LAATFERQ-GGNFELSVR 302
G+ V PG I + DLS + + E +V+ G +AA ER G
Sbjct: 183 GEYVQPGTPIVTLQDLSRVYVNFALPEQLFSQVRNGQQVEAKVAAFPERTFNGKVTAIDA 242
Query: 303 KVYPEVRDGKFRTDFVFTGERPDN-IRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNW 361
+V + R+ + F E PD +R G + L LG E +P G
Sbjct: 243 RVDQQTRNFTIQATF----ENPDQALRPGMFAEVKLLLGSEREVTTVPATALESKLYGTS 298
Query: 362 IFVLDK---DGKKAY----------RRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
+FV+ K DG+ A RR + G + E+ +GLE GE VV + +
Sbjct: 299 VFVISKAPADGQAASEDAQENLVVERRYVETGLSQNNWTEITKGLEPGESVVTAGQLKLQ 358
Query: 409 N 409
N
Sbjct: 359 N 359
>gi|146282860|ref|YP_001173013.1| membrane fusion protein [Pseudomonas stutzeri A1501]
gi|145571065|gb|ABP80171.1| membrane fusion protein [Pseudomonas stutzeri A1501]
Length = 394
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 93/395 (23%), Positives = 165/395 (41%), Gaps = 37/395 (9%)
Query: 19 IVGGIAFLLLVGWMIF----GNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVV 74
++ IA L L GW+I+ G R++AR + V G+V ++
Sbjct: 11 VILAIALLALGGWLIWRQLQGPELPAYRLEARPLV----------QRVVASGEVDSQSLA 60
Query: 75 QLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTM 134
Q+ E G+V + V EG V GD+++ L + ++ AEA L Q L+ +T+
Sbjct: 61 QVGSEITGVVAARHVREGDAVNAGDLLLELRDDEQRARLREAEAAL---QQLIDSTR-PQ 116
Query: 135 EQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALII 194
Q LR L+ + R +++E L++ KL+A E QA+ + A ++
Sbjct: 117 AQATLREAQHNLE------QASRELQRRETLFERKLLASEPLEQARR-----AELTARVV 165
Query: 195 ERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVS 254
+ + + E L R+ + + R + +Q+DG + DV G V
Sbjct: 166 RDRARFAAAALAEGGSEEQVL---RQRLEVARANLARTRIHAQVDGIVQSRDVEPGDLVQ 222
Query: 255 PGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVY---PEVRDG 311
PG+ + I +I +DE + ++ G +A + KV P V
Sbjct: 223 PGRTLLTIARSGSSEILLPLDEKSLAPIEHGQSARIIADAYPDRVLTAKVSFIAPSVDTA 282
Query: 312 KFRTDFVFTGERPDN-IRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGK 370
+ D + P +R G T +N++ G+ +++++P G + +DG
Sbjct: 283 RGTIDVHLDLQEPAVFLRQGMTVSVNIETGRREQALVLPNDALRARDGSRAQVLRVRDG- 341
Query: 371 KAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYE 405
R +R+G E+ EGLEAG+ V+I E
Sbjct: 342 VVERVGVRLGMLGTALSEISEGLEAGDLVLIGDAE 376
>gi|106895032|ref|ZP_01362141.1| Secretion protein HlyD [Clostridium sp. OhILAs]
gi|106773691|gb|EAT30266.1| Secretion protein HlyD [Clostridium sp. OhILAs]
Length = 409
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 88/394 (22%), Positives = 176/394 (44%), Gaps = 29/394 (7%)
Query: 40 TLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGD 99
T R A +++G ++V G V+ + G V + V+ G ++++GD
Sbjct: 22 TNRSTAVEVNMGAAIRGDIWEYVEELGVVKSKNNANVYANAVGTVTDVFVDIGDEIKKGD 81
Query: 100 IIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDL-DITRRQRT 158
++V+L L QI AEL +++ + ++ EKL L++ +I +R RT
Sbjct: 82 VLVKLDGEKLSRQI----AELESQRSAILAQYNEAKKPTDSRAIEKLDLEIKEIEKRIRT 137
Query: 159 ----YRQQEKLYDEKLIAREDFLQAKEDYELVQ---QKHALIIERLHQDSIYRSIQMDQM 211
R ++ LYD I+ E++ A E +K L +E + + ++ +
Sbjct: 138 AEEVVRNKKVLYDAGAISNEEYQNALRSLETEGNNLEKVKLDLELMKKPVSENTVIQYEA 197
Query: 212 EDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIE 271
+ +++R L + EN + + IDG + V G + PG + +I +++ IE
Sbjct: 198 QLKQLDLQRQAL--EKSGENFTIVAPIDGTVVSKLVEKGNYLQPGTPVMEIGNMNQLYIE 255
Query: 272 ALIDEHYIDRVKAGLAATFERQG---GNFELSVRKVYPE---------VRDGKFRTDFVF 319
+ I I +V + N E V K++P ++ + + D +
Sbjct: 256 SDILVGDIAKVHENAKVVISNKDLGIENLEGVVEKIHPNAFSKISNLGLQQKRVKVD-IE 314
Query: 320 TGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRI 379
E +N++ + + + +++IP+ F + IFV++KD KA R+++
Sbjct: 315 MKEAVNNLKPEYDLDVKIIADSKSNTVLIPENAVFNLDEKDCIFVVEKD--KAVIREVKQ 372
Query: 380 GRQNPQYYEVLEGLEAGERVVISSYESYKNSEIL 413
G ++ + E+L GLE G+RV++S ++ K I+
Sbjct: 373 GIKSGRQVEILSGLEEGDRVILSPDKTIKEGIIV 406
>gi|154250632|ref|YP_001411456.1| efflux transporter, RND family, MFP subunit [Parvibaculum
lavamentivorans DS-1]
gi|154154582|gb|ABS61799.1| efflux transporter, RND family, MFP subunit [Parvibaculum
lavamentivorans DS-1]
Length = 353
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 205 SIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQIND 264
+ Q+++ + L N R + + + +G +GL ++ +G V+PG I ++D
Sbjct: 121 TAQLEERQAALREAEANRDAAASRLADREIHAPFEGVVGLRNISVGTLVTPGTTITTLDD 180
Query: 265 LSDYKIEALIDEHYIDRVKAGL---AATFERQGGNFELSVRKVYPEV-RDGKFRTDFVFT 320
L K++ + Y+ ++ GL A T F VR V +V R + T
Sbjct: 181 LDPIKLDFTVPAAYLSTIRPGLEIAATTSALPDRIFRGEVRSVSTQVDRVSRSITARALV 240
Query: 321 GERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIG 380
+ ++ G + L + P E+++IP+ S N++FV+ G A RR++R G
Sbjct: 241 DNKDQVLKPGLLMVVEL-MKNPREAVVIPEEALVPSGTQNFVFVV--AGDVAARREVRTG 297
Query: 381 RQNPQYYEVLEGLEAGERVV 400
+ P E+L GL AGERVV
Sbjct: 298 ARRPGEVEILSGLAAGERVV 317
>gi|32034728|ref|ZP_00134859.1| COG0845: Membrane-fusion protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126207875|ref|YP_001053100.1| probable macrolide-specific efflux protein [Actinobacillus
pleuropneumoniae L20]
gi|126096667|gb|ABN73495.1| probable macrolide-specific efflux protein [Actinobacillus
pleuropneumoniae L20]
Length = 393
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 86/368 (23%), Positives = 148/368 (40%), Gaps = 68/368 (18%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G V+ ++ + G + V G QV++GD++ + +SN + AEA L+
Sbjct: 48 VLATGSVRASKRTEVGAQVSGKIINLYVTLGQQVKKGDLLAEIDSSNQSNSLSTAEATLS 107
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
Q L++ QV +E Q + + KLY ++ ++ DF AK
Sbjct: 108 SYQAQLKSAQVALEV------------------AQSNFNRLNKLYKQQSASQSDFETAK- 148
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLN---VRSQI 238
+ L R D++ I+ Q+ N A K NLN + S +
Sbjct: 149 --------NTLASARATVDNVKAQIKSAQISVNDA------------KTNLNYTQIVSPM 188
Query: 239 DGELGLLDVVLGQNVSPGQK---IGQINDLSDYKIEALIDEHYIDRVKAGLA---ATFER 292
DG + + V +GQ V+ Q I + DLS ++ I E I +VKAG A T
Sbjct: 189 DGTIVSIPVSVGQTVNANQTSPTIVHVADLSKMLVKLEISEGDIAQVKAGQAIRFTTLAE 248
Query: 293 QGGNFELSVRKVYPEV--------------RDGKFRTDFVFTGERPDN----IRSGQTYY 334
+ V P + + G + + +N +R G T
Sbjct: 249 PNHTHNSKIDSVDPALTTLSDDNASNKYAEKSGNTEAIYYYANSLVENSEQRLRIGMTVQ 308
Query: 335 INLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLE 394
+ + + +I+P + + +I VL+ + ++ +K+ IG + QY EVL GL
Sbjct: 309 GQVDIVKRENVLIVPTSALKKKSNAVFINVLENN--QSIEKKVEIGLADSQYTEVLSGLN 366
Query: 395 AGERVVIS 402
GE+V+ +
Sbjct: 367 EGEKVITA 374
>gi|88705198|ref|ZP_01102909.1| HlyD family secretion protein [gamma proteobacterium KT 71]
gi|88700288|gb|EAQ97396.1| HlyD family secretion protein [Congregibacter litoralis KT71]
Length = 365
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 225 IRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKA 284
+R R ++ +R+ DG +GL + +G ++PG I +++D++ K++ + EHY+ ++
Sbjct: 150 LRSRIDDRTIRAPFDGVIGLRRISVGALLTPGTVIAELDDINPMKLDFTLPEHYLSQISI 209
Query: 285 G-------LAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINL 337
G A E G +V P R R +R G +N+
Sbjct: 210 GDSVNAVSTAWDGEVFAGQVTQIGSRVDPATRAFSVRA---LIDNAEARLRPGMLMAVNV 266
Query: 338 QLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGE 397
LG+ I++ + QS + +FV+D++ A R + IGR+ P E+ GL G+
Sbjct: 267 SLGE-APGIVVSETALVQSGAKSSVFVVDEE-SVARRVTVEIGRRMPGLIEIRSGLSPGD 324
Query: 398 RVV 400
RVV
Sbjct: 325 RVV 327
>gi|154248146|ref|YP_001419104.1| efflux transporter, RND family, MFP subunit [Xanthobacter
autotrophicus Py2]
gi|154162231|gb|ABS69447.1| efflux transporter, RND family, MFP subunit [Xanthobacter
autotrophicus Py2]
Length = 426
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 81/344 (23%), Positives = 140/344 (40%), Gaps = 19/344 (5%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQN 125
G V+ V + + G V+E +VEEG VR+G +V L + L+ ++ AE +A+
Sbjct: 76 GHVETPYRVSIGSQITGTVKEVLVEEGQSVRQGQPLVSLDATELESAVVQAEGAVAQADA 135
Query: 126 LLRN-TQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYE 184
+R ++T K + LD R +KL QA D
Sbjct: 136 RMRQLRELTKPAADEAQKQARANLDNARAAFDRA---------DKLAKSGAGTQATLDEA 186
Query: 185 LVQQKHALIIERLHQDSIYRSIQMDQ----MEDNLANMRRNVLLIRERKENLNVRSQIDG 240
AL + R + +Y S E L+ + N+ R R + + DG
Sbjct: 187 TRALNVALTLARTAELQVYTSSPGGSDYVIAETQLSQAKANLATARARLGYATITAPRDG 246
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG---LAATFERQGGNF 297
L V G V G+ + + D ++ IDE + +K G LA+ F
Sbjct: 247 VLITRSVERGAVVQAGKTLLVLAPAGDTQLVVQIDEKNLSLLKLGQSALASADAYPDQRF 306
Query: 298 ELSVRKVYPEVRDGKFRTDFVFT-GERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQS 356
S+ + P V + + T E P +R T +++ + + +++++P T
Sbjct: 307 PASLTYINPSVDITRASVEVKLTVPEPPVYLRQDMTVSVDIAVDRRPDAVVVPARTVHSP 366
Query: 357 TGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
T ++ +DG +A +K+R+G + +VLEGL GE V+
Sbjct: 367 TSAAPFVLVARDG-RAREQKVRLGLRAGDQVQVLEGLTPGEAVL 409
>gi|110678663|ref|YP_681670.1| efflux transporter, RND family, MFP subunit [Roseobacter
denitrificans OCh 114]
gi|109454779|gb|ABG30984.1| efflux transporter, RND family, MFP subunit [Roseobacter
denitrificans OCh 114]
Length = 375
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 84/333 (25%), Positives = 139/333 (41%), Gaps = 44/333 (13%)
Query: 81 GGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLR 140
G V E +V EGA V +G+++ L LD+ A+A LAE + + + Q R
Sbjct: 68 AGTVDEIMVLEGASVDQGEMLATLDTELLDILARQAQARLAEAR-----AGIVIAQTR-- 120
Query: 141 NKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQD 200
+ R + E L + + F A+ D + + + L+ E
Sbjct: 121 -----------VNRAANALARIEGLRNTASFSTSRFDDAQSD---LFEANGLLAEA---- 162
Query: 201 SIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIG 260
++ E LA R L R R + + G + + + G+ ++ G +
Sbjct: 163 ----EARVQTAEATLAETRYQ--LDRAR-----ITAPYAGIVLEVQINPGEFIASGAAVV 211
Query: 261 QINDLSDYKIEALIDEHYIDRVKAGLAATFERQGG-NFELSVRKVYPEVRDGKFRTDFV- 318
+ D+ +IEA + Y+ ++ G A + G +L+VR + P V D RT V
Sbjct: 212 TLLDVQSMEIEASVPSKYVSVLQPGQAVAGSTETGVPLDLNVRVLLP-VEDTATRTRPVR 270
Query: 319 FTGE---RPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRR 375
FT D + GQ+ IN+ + P E + +PK Q+ GG W + DG A R
Sbjct: 271 FTSSDLASLDRLAIGQSITINIPISAPREVLSVPKDALVQARGG-WTVFVAADG-TAQPR 328
Query: 376 KIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
++IG +EVL+GL G+ VV E +
Sbjct: 329 TVQIGVALGDRFEVLDGLSEGDVVVTRGNERLR 361
>gi|150017763|ref|YP_001310017.1| efflux transporter, RND family, MFP subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149904228|gb|ABR35061.1| efflux transporter, RND family, MFP subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 420
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 85/337 (25%), Positives = 148/337 (43%), Gaps = 37/337 (10%)
Query: 88 VVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA--EKQNLLRNTQVTMEQDRLRNKTEK 145
+VE G V GD I L + ++ I A+A++A EKQ + + + Q L EK
Sbjct: 86 LVENGQYVNAGDTIATLDDQDIQNSIKTAQAQIAVNEKQVEVAEQSLNVSQAAL----EK 141
Query: 146 LQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRS 205
+++LD QR Y +Q+ L+D I++ D LQA E L + DS S
Sbjct: 142 YKINLD--DAQRNYERQKTLFDGGAISQTD-LQAAEK--------TLNSAKADYDSGNAS 190
Query: 206 IQMDQ--MEDNLANMR-RNVLLIRERKE--NLNVRSQIDGELGLLDVVLGQNVSPGQKIG 260
IQ Q +E + AN+ + V L + + + N+ +++ I G + + +GQ S G +
Sbjct: 191 IQSSQASIETSKANLEAQKVALAKNQSDLANIVIKAPISGVISGKSMNIGQMASTGTALA 250
Query: 261 QINDLSDYKIEALIDEHYIDRVKAGLAATFERQG------GNFELSVRKVYPEVR--DGK 312
+ND+S + + I VK G AT +G G + P R + K
Sbjct: 251 IVNDVSSVYATIQVPQEKISEVKIGQGATVIVEGSDQTHNGTIQTIDAAADPTSRVFNCK 310
Query: 313 FRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKA 372
+ D ++ G + L Q E I +P + G ++F+ D A
Sbjct: 311 VKID-----NSDKSLLPGIYGKVTLVSDQNNEIITVPVNALVGNEGEYYVFI--NDNGTA 363
Query: 373 YRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKN 409
+ K+ IG N E+ G++ G++++ S+ + ++
Sbjct: 364 KKTKVTIGETNGNNVEMTSGIKDGDQIICSNTSTLQD 400
>gi|153093636|gb|EDN74598.1| possible Acr family acridine efflux pump AcrA [Mannheimia
haemolytica PHL213]
Length = 387
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 84/370 (22%), Positives = 153/370 (41%), Gaps = 58/370 (15%)
Query: 53 VTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQ 112
VT + N V G V+ ++ + G +Q+ VE G V++GD+I + +SN
Sbjct: 39 VTRAEINKNVLATGSVRANKRTEVGAQVSGKIQKLYVELGQSVKQGDLIADIDSSNQSNT 98
Query: 113 ILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIA 172
+ A+A L+ + L + QV +E Q Y + KLY +
Sbjct: 99 LSTAQARLSSYKAQLTSAQVALEV------------------AQSNYNRLNKLYRANSAS 140
Query: 173 REDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENL 232
D A K+ L + D+I Q+ E ++ + + N+ +
Sbjct: 141 LNDLETA---------KNTLASAKATVDNI--KAQLKSAEISVNDAKTNLTYTQ------ 183
Query: 233 NVRSQIDGELGLLDVVLGQNVSPGQ---KIGQINDLSDYKIEALIDEHYIDRVKAGLA-- 287
+ S +DG + + V +GQ V+ Q I Q+ DLS I+ I E I +VK G
Sbjct: 184 -IISPMDGVIVSVPVSVGQTVNSNQTSPTIVQVADLSKMLIKLEISEGDIAQVKVGQKVK 242
Query: 288 -ATFERQGGNFELSVRKVYPEV----------RDGKFRTDFVFTGERPDN----IRSGQT 332
+T + ++ V P + + G + + DN +R G T
Sbjct: 243 FSTLAEPNREYSATIDSVDPALTTLTDNNYTEQSGNTEAVYYYANVSVDNADNSLRIGMT 302
Query: 333 YYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEG 392
+ + + + +++P + N++ VL+ + ++ RKI+IG + Q EVL G
Sbjct: 303 TQAQITIDKREQVLVVPTSVIKKRGKENYVLVLENE--QSVERKIQIGISDTQNTEVLAG 360
Query: 393 LEAGERVVIS 402
L G++V+++
Sbjct: 361 LNEGDQVIVT 370
>gi|39997916|ref|NP_953867.1| HlyD family secretion protein [Geobacter sulfurreducens PCA]
gi|39984861|gb|AAR36217.1| HlyD family secretion protein [Geobacter sulfurreducens PCA]
Length = 329
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 7/231 (3%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
VRV G ++ +T V+L + G V+E++V+EG V G ++ RL + L L++ +
Sbjct: 33 VRVSGNIE-VTDVELGFKIPGTVRERLVDEGVMVETGQVVARLDDDELRLEVAREGRQAE 91
Query: 122 EKQNLLRNTQVTMEQDRLRNK---TEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQ 178
LR + ++ + ++ Q D D R + + +QE L+ ++I+R D+
Sbjct: 92 ALAAQLRELETGFRREEIAQADAAVKRAQADAD--RLEADFARQEALFRREVISRRDYDA 149
Query: 179 AKEDYELVQ-QKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
AK + Q Q H + + R Q+D L R + L R R + + +
Sbjct: 150 AKAARDASQAQLHEVQARQELMHRGPRREQIDAARARLNQAREALALARTRLSHATLAAP 209
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAA 288
++G + V G+ V+ G I I DLS+ + A I E + R+K G A
Sbjct: 210 LNGLVLSKHVEPGEQVAAGTPIITIGDLSNTWLRAYIPETDLGRIKVGQKA 260
>gi|94967339|ref|YP_589387.1| secretion protein HlyD [Acidobacteria bacterium Ellin345]
gi|94549389|gb|ABF39313.1| secretion protein HlyD [Acidobacteria bacterium Ellin345]
Length = 421
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 69/334 (20%), Positives = 145/334 (43%), Gaps = 10/334 (2%)
Query: 76 LSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRN-TQVTM 134
++P+ V++ V+ GA+V RG ++ RL + ++ +A + ++ + TQ +
Sbjct: 59 ITPKVSAPVRKFFVQRGARVHRGQLLARLESRDVSAAAEDARGGFQQAESSYKTATQAAV 118
Query: 135 EQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALII 194
++ + + + Q ++ +Q+ + ++KL+ E I D A+ LVQ +
Sbjct: 119 PEEYQKAELDYEQAKTNLDVQQKIFDARQKLFQEGAIPGRDLDTAR--LNLVQAQSQFNE 176
Query: 195 ERLHQDS---IYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQ 251
H +S + R M E L + R + + +RS IDG + G+
Sbjct: 177 ASKHLESAKAVTREQSMRNAEGQLQSARGKLQVAEASVSYTEIRSPIDGVVTDRPFFDGE 236
Query: 252 NVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFEL--SVRKVYPEVR 309
+PG + + + S +A + + ++K G AT QG + V V P +
Sbjct: 237 MTTPGTPLITVMETSSLLAKAHLPQAEAQQLKPGDDATVTVQGLEKPVPGKVTMVSPALD 296
Query: 310 DGKFRTD-FVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKD 368
G + +V + ++ G + + +++ IP + G FV+ +
Sbjct: 297 PGSTTVEVWVKVENKEGALKPGTAARVAIAARTLKDALTIPSSAVLKDDSGK-AFVMVVE 355
Query: 369 GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
A +R ++IG + +++EGL+AGE+V+ +
Sbjct: 356 NAMARKRDVQIGITDGDDVQIVEGLKAGEQVITT 389
>gi|149369682|ref|ZP_01889534.1| membrane fusion efflux protein, putative [unidentified eubacterium
SCB49]
gi|149357109|gb|EDM45664.1| membrane fusion efflux protein, putative [unidentified eubacterium
SCB49]
Length = 426
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 106/454 (23%), Positives = 190/454 (41%), Gaps = 113/454 (24%)
Query: 11 IRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARG--ISIGHVTHEQFNDFVRVDGQV 68
++K L +I+ + FL+L+ I+G A + +G + I VT + V G++
Sbjct: 1 MKKNTLIWII--VIFLVLIAGFIYGKKAGWFGNEDQGKVVEITEVTPLTITETVAATGKI 58
Query: 69 QPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLR 128
QP V LS E G V + V+EG V +G ++V++ N DL +A+L++ Q L+
Sbjct: 59 QPEIEVSLSSEVSGEVIDLQVKEGQLVEKGQLLVKI---NPDL----IQAQLSQSQAGLQ 111
Query: 129 N--TQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELV 186
N Q+T + L+N + Y + + LYD+ +I+R D+ + DYE+
Sbjct: 112 NVRAQLTNAEASLKNA-------------KANYDRSKLLYDKGVISRSDWDRVVADYEMA 158
Query: 187 QQKHALIIERLHQDSIYRSIQ-----MDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
Q + S Y ++Q + Q +DNL+ R E + + + G
Sbjct: 159 QAS---------KTSAYYNVQSSSANVKQSQDNLS-----------RTE---IYAPMTGT 195
Query: 242 LGLLDVVLGQNV-----SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFE----- 291
+ + V LG+ V G +I ++ +L + ++E ++E+ I +V G + E
Sbjct: 196 ISKMSVELGERVVGTAQMAGTEIIRVANLDNMEVEVDVNENDIVKVAVGDSTIVEVDAWT 255
Query: 292 ---------------------RQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDN---I 327
Q NF++ VR + +D T +P N
Sbjct: 256 KREFKGLVTEIANSAESTLTVDQVTNFKVKVRILPESYKD--------LTEGKPKNYSPF 307
Query: 328 RSGQTYYINLQLGQPTESIIIPKG-----TFFQSTGGNWIF-VLDKDGKK---------- 371
R G T +++ + + I +P T S+ +++ V+ D KK
Sbjct: 308 RPGMTATVDVITNKKQDIIAVPISAVVIKTDTSSSKKSYVKEVVTADTKKFECVFVENDG 367
Query: 372 -AYRRKIRIGRQNPQYYEVLEGLEAGERVVISSY 404
A R + G Q+ E+ GLE G++V+ Y
Sbjct: 368 IAKLRVVETGIQDNSNIEIRSGLEKGDKVITGPY 401
>gi|34540353|ref|NP_904832.1| efflux transporter, MFP component, RND family [Porphyromonas
gingivalis W83]
gi|34396665|gb|AAQ65731.1| efflux transporter, MFP component, RND family [Porphyromonas
gingivalis W83]
Length = 350
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 230 ENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAAT 289
EN +RS I G + + G SP + I + ++ K+ + E Y R+K G+ AT
Sbjct: 156 ENTVLRSPISGVITARNYDSGDMASPTKPIYVVEQIAPVKLRIDVSEQYFSRLKKGMPAT 215
Query: 290 FE---RQGGNFELSVRKVYPEVRDGKFRTDF-VFTGERPDNIRSGQTYYINLQLGQPTES 345
QG FE + VYP V + R +R G +NL G + +
Sbjct: 216 ITVDALQGQTFEGKISLVYPAVDASTHTIGVEIQIANRDQLLRPGMYARVNLDFGHKS-A 274
Query: 346 IIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+++ + G FV + KA RR +++G + YE++EGL GE VV +
Sbjct: 275 VMVEDLAVVKQVGSGEFFVFVVENGKAVRRMVKVGARQNDSYEIIEGLNVGETVVTA 331
>gi|148253371|ref|YP_001237956.1| Putative efflux transporter [Bradyrhizobium sp. BTAi1]
gi|146405544|gb|ABQ34050.1| Putative efflux transporter [Bradyrhizobium sp. BTAi1]
Length = 421
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 87/393 (22%), Positives = 163/393 (41%), Gaps = 28/393 (7%)
Query: 23 IAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGG 82
+A +LL+G FG S V + + V + V G V+ V++ + G
Sbjct: 31 LAVMLLLG---FGGWQSVRAVLGPAVVVDLVRRGDLVETVVASGHVETPYRVEIGSQITG 87
Query: 83 IVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNK 142
V + +V+EG +V +G ++ L L +L A+ +A+ + +R + + L +
Sbjct: 88 TVDDVLVQEGQRVTKGQPLISLEARELKAAVLQAQGAVAQAEARMRQ----LAELTLPSA 143
Query: 143 TEKL-QLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE--DYELVQQKHA----LIIE 195
E L Q + Q+TY + +L R +A++ D L Q++ A
Sbjct: 144 KEALRQAQATLLNAQQTYDRTSQLASNGYATRAALDEAQKTLDVALAQKRAAEFQVFTAS 203
Query: 196 RLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSP 255
DS+ Q++Q NL + R + + DG L +V G P
Sbjct: 204 PGGSDSVMAETQLNQARANLDTAQ-------SRLGYATILAPRDGVLITRNVEKGAVAQP 256
Query: 256 GQKIGQINDLSDYKIEALIDEHYIDRVKAG---LAATFERQGGNFELSVRKVYPEVRDGK 312
G+ + + D ++ IDE + ++ G LA+ F V + P V +
Sbjct: 257 GKALLVLAPAGDVQLVLQIDERNLGKLALGQTALASADAYPDRRFAAVVSYINPGVDISR 316
Query: 313 FRTDFVFT-GERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN-WIFVLDKDGK 370
T + PD +R T +++++ +++ +P + T G W+ + KDG+
Sbjct: 317 ASVQVKLTVKDPPDYLRQDMTVSVDIEVAARRDTLELPVRSVHDLTSGQPWVLGV-KDGR 375
Query: 371 KAYRRKIRIGRQNPQYYEVLEGLEAGERVVISS 403
A + +R+G + + E++ GL AG+ V S
Sbjct: 376 AA-KIPVRVGIRGNSHVEIVAGLSAGDVAVPQS 407
>gi|78188536|ref|YP_378874.1| Secretion protein HlyD [Chlorobium chlorochromatii CaD3]
gi|78170735|gb|ABB27831.1| Secretion protein HlyD [Chlorobium chlorochromatii CaD3]
Length = 360
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 77/372 (20%), Positives = 153/372 (41%), Gaps = 56/372 (15%)
Query: 42 RVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDII 101
R + + +G V+ + G V+ TV +L E G V EG QVR G I
Sbjct: 29 RANTVDVEVGEVSPSDLVQAIYATGFVEADTVAELHTEASGRVIAVGALEGEQVRAGQTI 88
Query: 102 VRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQ 161
V+L + L + A A LAE+Q ++ + +RLR RRQ +R
Sbjct: 89 VQLDATRAQLAVREARAALAEQQAIVND-------NRLR-----------FARRQALFR- 129
Query: 162 QEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRN 221
E I+R++ +++ RL + + + Q+
Sbjct: 130 ------EGAISRQELEESER-------------SRLQSEELLQQRQL------------Q 158
Query: 222 VLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDR 281
+ + E ++ + G L L + +G + Q+ D + + + +DE + R
Sbjct: 159 IGMKAEEARKSSILAPFSGTLTLQSLKVGDYAPANTLVAQVVDSNGFMVVVEVDELDMPR 218
Query: 282 VKAGLAATFERQG---GNFELSVRKVYPEV-RDGKFRTDFVFTGERPDNIRSGQTYYINL 337
++ G AAT ++ V ++ P R K ++ E P +I+ G T N+
Sbjct: 219 LRVGQAATVAFDALPDKRYKAVVSRLVPHTDRITKTSRLYLTLQELPASIQEGMTATANI 278
Query: 338 QLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGE 397
+++++ K ++++ ++K K + ++ +G + + EVL G+ AG+
Sbjct: 279 VYNVRPQALLVRKNALVDEQRKSYVWKIEKGALK--KVEVELGASDISFVEVLRGVRAGD 336
Query: 398 RVVISSYESYKN 409
+VV+S ++ ++
Sbjct: 337 KVVLSPAKTLRD 348
>gi|84502248|ref|ZP_01000396.1| hypothetical protein OB2597_19631 [Oceanicola batsensis HTCC2597]
gi|84389608|gb|EAQ02327.1| hypothetical protein OB2597_19631 [Oceanicola batsensis HTCC2597]
Length = 417
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 75/354 (21%), Positives = 139/354 (39%), Gaps = 58/354 (16%)
Query: 58 FNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAE 117
D VR+ G + P + + E G V E + G G+++VR+ D++ L +
Sbjct: 103 LQDTVRITGSLSPANHLGIPAEVSGRVDEVLKRPGDAADEGEVLVRI-----DIETLRNQ 157
Query: 118 AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
+EQ R + QL+ ++ +RT E L D + A
Sbjct: 158 ----------------LEQSRATADATRAQLEFARSQLERT----ESLVDRGIAASSTL- 196
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
DS ++Q Q++ NLA + R V + + + +
Sbjct: 197 ----------------------DSNVANVQ--QLQSNLAALERQVATAEQALDKATITAP 232
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG--- 294
G + +V G V+PG + + D++ ++E + Y R++ G T +G
Sbjct: 233 FSGMISQRNVDPGTYVAPGTALMTLVDITSLELEGAVPVLYAPRIRTGQTVTITVEGLGA 292
Query: 295 GNFELSVRKVYPEVRDG-KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTF 353
+F +V ++ P G + + G +R G L LG+ ++I IP+
Sbjct: 293 QSFSGTVERIAPVAATGTRMLPIYATFGNDDGTLRGGMFASGRLVLGEKADAIGIPRDAL 352
Query: 354 FQSTGGNWIFVLDKDGKKAYRRKIRIGR--QNPQYYEVLEGLEAGERVVISSYE 405
+ G FVL +G + R+ + + R + E+ EGL+ G+ +V + E
Sbjct: 353 REDDEGR--FVLRIEGDRVERQPVTVARMWDRGRMVEISEGLDPGDTIVSAPLE 404
>gi|77635161|ref|ZP_00797249.1| COG0845: Membrane-fusion protein [Yersinia pestis Angola]
gi|89105508|ref|ZP_01178026.1| COG0845: Membrane-fusion protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|108806651|ref|YP_650567.1| putative HlyD family secretion protein [Yersinia pestis Antiqua]
gi|108812777|ref|YP_648544.1| HlyD family secretion protein [Yersinia pestis Nepal516]
gi|145599604|ref|YP_001163680.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
gi|108776425|gb|ABG18944.1| HlyD family secretion protein [Yersinia pestis Nepal516]
gi|108778564|gb|ABG12622.1| putative HlyD family secretion protein [Yersinia pestis Antiqua]
gi|145211300|gb|ABP40707.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
Length = 370
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 86/394 (21%), Positives = 171/394 (43%), Gaps = 52/394 (13%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
+ IA LL+ G+ I + + + V+ + + V H V G++ + V + +
Sbjct: 11 LAAIAVLLIGGFFIARHLMAPVPVNYQTVK---VVHRDLQQNVLATGKLDAVRKVDVGAQ 67
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRL 139
G +++ VE G V+RG ++ + QI EA L Q+L
Sbjct: 68 VSGQLEKLYVEIGDHVKRGQLLAMIDPQQAQNQIKEVEATL---QDL------------- 111
Query: 140 RNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQ 199
+++Q ++ T +Q+ L ++++R+D QA D + K I
Sbjct: 112 --NAQRIQAKAELHLATVTLGRQQNLAKLQVVSRQDLDQAVTDLAVKNAKVGTI------ 163
Query: 200 DSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQK- 258
Q+++ + +L + N+ + + + +DG++ + + GQ V Q+
Sbjct: 164 -----DAQINKAKASLDTAKINL-------DYTQISAPMDGDVVQITTLQGQTVIAAQQA 211
Query: 259 --IGQINDLSDYKIEALIDEHYIDRVKAGLAATFE---RQGGNFELSVRKVYP---EVRD 310
I + D+S ++A + E + +K G+ A+F G F ++ + P +V D
Sbjct: 212 PNILTLADMSTMLVQAQVSEADVINLKPGMKASFTVLGDPGKRFSGVLKDILPTPEKVND 271
Query: 311 GKFRTDFVFTGERPDNI-RSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN-WIFVLDKD 368
F + F PD + R T +++QL ++++IP G N + + K+
Sbjct: 272 AIFYSA-RFEVPNPDRLLRLQMTAQVSIQLANVDQAVVIPLAALGDELGSNRYQVTVLKE 330
Query: 369 GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
GK+ +R++ IG +N +V+ GL GE V++S
Sbjct: 331 GKEE-KREVTIGIRNNVDAQVISGLSVGEDVIVS 363
>gi|16121644|ref|NP_404957.1| putative HlyD family secretion protein [Yersinia pestis CO92]
gi|22126691|ref|NP_670114.1| hypothetical protein y2814 [Yersinia pestis KIM]
gi|51595730|ref|YP_069921.1| putative HlyD family secretion protein [Yersinia pseudotuberculosis
IP 32953]
gi|149366621|ref|ZP_01888655.1| putative HlyD family secretion protein [Yersinia pestis CA88-4125]
gi|17368301|sp|P58411|MACA_YERPE Probable macrolide-specific efflux protein macA precursor
gi|21959708|gb|AAM86365.1|AE013884_12 putative membrane protein [Yersinia pestis KIM]
gi|51589012|emb|CAH20630.1| putative HlyD family secretion protein [Yersinia pseudotuberculosis
IP 32953]
gi|115347123|emb|CAL20016.1| putative HlyD family secretion protein [Yersinia pestis CO92]
gi|149290995|gb|EDM41070.1| putative HlyD family secretion protein [Yersinia pestis CA88-4125]
Length = 371
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 86/394 (21%), Positives = 171/394 (43%), Gaps = 52/394 (13%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
+ IA LL+ G+ I + + + V+ + + V H V G++ + V + +
Sbjct: 12 LAAIAVLLIGGFFIARHLMAPVPVNYQTVK---VVHRDLQQNVLATGKLDAVRKVDVGAQ 68
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRL 139
G +++ VE G V+RG ++ + QI EA L Q+L
Sbjct: 69 VSGQLEKLYVEIGDHVKRGQLLAMIDPQQAQNQIKEVEATL---QDL------------- 112
Query: 140 RNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQ 199
+++Q ++ T +Q+ L ++++R+D QA D + K I
Sbjct: 113 --NAQRIQAKAELHLATVTLGRQQNLAKLQVVSRQDLDQAVTDLAVKNAKVGTI------ 164
Query: 200 DSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQK- 258
Q+++ + +L + N+ + + + +DG++ + + GQ V Q+
Sbjct: 165 -----DAQINKAKASLDTAKINL-------DYTQISAPMDGDVVQITTLQGQTVIAAQQA 212
Query: 259 --IGQINDLSDYKIEALIDEHYIDRVKAGLAATFE---RQGGNFELSVRKVYP---EVRD 310
I + D+S ++A + E + +K G+ A+F G F ++ + P +V D
Sbjct: 213 PNILTLADMSTMLVQAQVSEADVINLKPGMKASFTVLGDPGKRFSGVLKDILPTPEKVND 272
Query: 311 GKFRTDFVFTGERPDNI-RSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN-WIFVLDKD 368
F + F PD + R T +++QL ++++IP G N + + K+
Sbjct: 273 AIFYSA-RFEVPNPDRLLRLQMTAQVSIQLANVDQAVVIPLAALGDELGSNRYQVTVLKE 331
Query: 369 GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
GK+ +R++ IG +N +V+ GL GE V++S
Sbjct: 332 GKEE-KREVTIGIRNNVDAQVISGLSVGEDVIVS 364
>gi|56476637|ref|YP_158226.1| cation efflux system transmembrane protein [Azoarcus sp. EbN1]
gi|56312680|emb|CAI07325.1| cation efflux system transmembrane protein [Azoarcus sp. EbN1]
Length = 519
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 22/238 (9%)
Query: 184 ELVQQKHAL-IIERLHQDSIYRSIQMDQMEDNLANMRR------NVLLIRERKENLNVR- 235
EL+ L I ERL +DS + LAN R V RE K + R
Sbjct: 169 ELLSASEELRIAERLQRDSATTDPIASEAARRLANATRERLQNWQVAAAREGKGEIAQRQ 228
Query: 236 ---SQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFER 292
S +G + + V G PG+ + +I DLS + A I E + RV+ G A+
Sbjct: 229 TFHSPANGVVLEKNAVQGARFMPGEAVYRIADLSKVWVIADIFERDLARVRVGQPASVTL 288
Query: 293 QG---GNFELSVRKVYP----EVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTES 345
F+ V +YP E R + R + R +R G ++ L G PT
Sbjct: 289 DAFPDRRFDAKVGYLYPTLNVETRSTRIRLEL---DNREGLLRPGMFAHVELASGSPTPR 345
Query: 346 IIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISS 403
+ +P G + ++ D + + +R+G + + EVLEG+EAG+RVV S+
Sbjct: 346 VTVPTSAVIDD-GVRQVVLIALDEGRFKPQPVRLGERGTDHVEVLEGVEAGDRVVTSA 402
>gi|88857051|ref|ZP_01131694.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
gi|88820248|gb|EAR30060.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
tunicata D2]
Length = 413
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 73/393 (18%), Positives = 164/393 (41%), Gaps = 4/393 (1%)
Query: 13 KKHLPYIVGGIAFLLLVG---WMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQ 69
KKH PY+ + +L+G W++ +A R+ + G V V G+++
Sbjct: 8 KKHTPYLKVLVLAAVLMGAFVWLMMQPNAQQ-RIASSDFWSGQVQQGDLQLQVSGYGRLK 66
Query: 70 PITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRN 129
T L+ + V+E V++ GA V +I+RLS+ + ++ A+ L + N
Sbjct: 67 SKTPRLLTAQSNATVEEIVLKPGALVTPDSVILRLSDPLVSQALIEAKRLLNQSNNQFLQ 126
Query: 130 TQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQK 189
++ +++ L + + L + Q +L +++ +F ++ + + ++
Sbjct: 127 LKINQQRELLAQQAQLETLRSALESADLQVNAQSQLIANGIVSNIEFQRSLLEQRQLTRR 186
Query: 190 HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVL 249
+ +R+ Q + + + N + + + ++E L V + I G + L V L
Sbjct: 187 LEIEQQRIAQLAQLHQANLAIAQSNTEAQQAVLAQAQTQQERLTVTAGITGVVQSLHVDL 246
Query: 250 GQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVR 309
GQ VS GQ++ + +D + + + +V+ G T + G +V ++ P +
Sbjct: 247 GQTVSFGQQLVLVGSTTDLYALLNVPQATMQQVELGQVVTINTRAGVISGAVSRIDPVIN 306
Query: 310 DGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDG 369
+G + + T N R ++ G + I K +F+L+++
Sbjct: 307 NGSVQVEVALTSLLTANARPELNIEGIIETGVRRNVLFIDKPVNVSPFSEATLFLLNEEK 366
Query: 370 KKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
A ++ G Q E++ G + ++ ++S
Sbjct: 367 DSAMATHVQFGEQTNDKIEIVAGAKLADQFILS 399
>gi|37519915|ref|NP_923292.1| hypothetical protein gll0346 [Gloeobacter violaceus PCC 7421]
gi|35210907|dbj|BAC88287.1| gll0346 [Gloeobacter violaceus PCC 7421]
Length = 442
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 102/427 (23%), Positives = 170/427 (39%), Gaps = 44/427 (10%)
Query: 13 KKHLPYIVGGIAFLLLVGWMIF--GNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
K+ LP+++G F +I+ G + + ++I V V+ G VQP
Sbjct: 6 KRPLPWLIGLAIFGTGAAAVIYVLGAQSGLSQAQVAAMTIP-VATTNLGQQVQASGLVQP 64
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
I LSP + G + +V+EG QV++G+++ ++ + + Q+ AEA LA Q L
Sbjct: 65 IRKTNLSPRQAGRIGRLLVDEGRQVKQGELVAQMESRLPEAQVRQAEASLARAQAELLQK 124
Query: 131 QVTMEQDRLRNKTEKLQLDLDITRRQ---RTYRQQEKLYDEKLIAREDFL--QAKEDY-- 183
+ + +R +L L + RQ R R E+L + +A E A DY
Sbjct: 125 RRGARPEEIREAQARL-LSAEAAVRQGAARLERTGEELARYRRLAGEGATSQNALSDYVN 183
Query: 184 -------ELVQQK-----HALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKEN 231
L Q+ A ++ RL + + R ++ Q E +A + + R + E
Sbjct: 184 REREAAANLAGQRSQLEAQAQVLARLRKGT--RIEEIRQAEAGVALAQAQLDYFRTQLEE 241
Query: 232 LNVRSQIDGELGLLDVVLGQNVSP--------GQKIGQINDL-SDYKIEALIDEHYIDRV 282
V + G + G V+P G I +L S ++EA + E + ++
Sbjct: 242 TRVYAPFAGVISRRFAQQGDYVTPSTAASTSDGASSTSIVELVSGLEVEAKVPEASLAQI 301
Query: 283 KAGLAATFERQ---GGNFELSVRKVYPE-VRDGKFRTDFV----FTGERPDNIRSGQTYY 334
G A G F+ VR V P VR+ T V +G+ +R G
Sbjct: 302 YPGQAVQIRTDAYPGAVFKGRVRLVTPRAVREENVTTIRVKVTLLSGQ--GQLRPGLNVK 359
Query: 335 INLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLE 394
+N IP G ++ G +A R +R+G ++LEGL
Sbjct: 360 VNFTAATLAGVSTIPLAAVISKQDGQTGVLVPTAGNRAQFRPVRLGTSAGSKVQILEGLR 419
Query: 395 AGERVVI 401
GERV +
Sbjct: 420 PGERVFL 426
>gi|88806246|ref|ZP_01121764.1| hypothetical protein RB2501_11887 [Robiginitalea biformata
HTCC2501]
gi|88783855|gb|EAR15026.1| hypothetical protein RB2501_11887 [Robiginitalea biformata
HTCC2501]
Length = 338
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 77/355 (21%), Positives = 149/355 (41%), Gaps = 48/355 (13%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V VQP ++ ++ GI+++ +V EG V+ G ++++++ + +L NA ++
Sbjct: 12 VYASATVQPDSMYKVHAAVSGILEKNLVREGDLVQTGTPLLKITDRSPELSRENARLQME 71
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ + + + R +T +L D +R+QEKL+ +++ +R F K
Sbjct: 72 LAASNYQGSTTPLRDLASRIETARLAYIDDSV----NFRRQEKLWSQQIGSRATFENRKL 127
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKEN---------- 231
YE + Q+DQ++ A + R + E+ N
Sbjct: 128 AYERSRN------------------QLDQLQTEYARLERELRTKMEQARNSYRSYQANAD 169
Query: 232 -LNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG---LA 287
VRS IDG++ L G+ V P + + + + +E L+DE I R++ G L
Sbjct: 170 EFTVRSFIDGKVYALFKEPGELVVPNEPLATLGKPDSFVVELLVDEVDIVRLRTGQEVLV 229
Query: 288 ATFERQGGNFELSVRKVYPE--VRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTES 345
+ F + ++YP+ R+ F + F P+ + G + N+ + + +
Sbjct: 230 SLDAYPDEVFRAGLTRIYPQKDSRNQTFLAEARFKAP-PNQLYPGLSGEANIVIDRRENA 288
Query: 346 IIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
+ IP+ VL +DG K K+ G Q E+ GL+AG ++
Sbjct: 289 LTIPRNLLLAGDS-----VLTEDGMK----KVVTGLQTLDRVEIRSGLDAGTNIL 334
>gi|153949946|ref|YP_001401576.1| macrolide-specific efflux protein MacA [Yersinia pseudotuberculosis
IP 31758]
gi|152961441|gb|ABS48902.1| macrolide-specific efflux protein MacA [Yersinia pseudotuberculosis
IP 31758]
Length = 370
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 86/394 (21%), Positives = 171/394 (43%), Gaps = 52/394 (13%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPE 79
+ IA LL+ G+ I + + + V+ + + V H V G++ + V + +
Sbjct: 11 LAAIAVLLIGGFFIARHLMAPVPVNYQTVK---VVHRDLQQNVLATGKLDAVRKVDVGAQ 67
Query: 80 EGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRL 139
G +++ VE G V+RG ++ + QI EA L Q+L
Sbjct: 68 VTGQLEKLYVEIGDHVKRGQLLAMIDPQQAQNQIKEVEATL---QDL------------- 111
Query: 140 RNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQ 199
+++Q ++ T +Q+ L ++++R+D QA D + K I
Sbjct: 112 --NAQRIQAKAELHLATVTLGRQQNLAKLQVVSRQDLDQAVTDLAVKNAKVGTI------ 163
Query: 200 DSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQK- 258
Q+++ + +L + N+ + + + +DG++ + + GQ V Q+
Sbjct: 164 -----DAQINKAKASLDTAKINL-------DYTQISAPMDGDVVQITTLQGQTVIAAQQA 211
Query: 259 --IGQINDLSDYKIEALIDEHYIDRVKAGLAATFE---RQGGNFELSVRKVYP---EVRD 310
I + D+S ++A + E + +K G+ A+F G F ++ + P +V D
Sbjct: 212 PNILTLADMSTMLVQAQVSEADVINLKPGMKASFTVLGDPGKRFSGVLKDILPTPEKVND 271
Query: 311 GKFRTDFVFTGERPDNI-RSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN-WIFVLDKD 368
F + F PD + R T +++QL ++++IP G N + + K+
Sbjct: 272 AIFYSA-RFEVPNPDRLLRLQMTAQVSIQLANVDQAVVIPLAALGDELGSNRYQVTVLKE 330
Query: 369 GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
GK+ +R++ IG +N +V+ GL GE V++S
Sbjct: 331 GKEE-KREVTIGIRNNVDAQVISGLSVGEDVIVS 363
>gi|68548838|ref|ZP_00588307.1| Secretion protein HlyD [Pelodictyon phaeoclathratiforme BU-1]
gi|68244396|gb|EAN26588.1| Secretion protein HlyD [Pelodictyon phaeoclathratiforme BU-1]
Length = 360
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 83/398 (20%), Positives = 162/398 (40%), Gaps = 69/398 (17%)
Query: 13 KKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPIT 72
+K LP +A L L + +T+ I + VT+ + + G V+
Sbjct: 5 QKFLPKYTIALALLFLATVIFLMTRGNTV-----DIEVDQVTNAELVQAIYATGFVEAEA 59
Query: 73 VVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQV 132
V LS E G V+ EG V G I++ S+ + + A+A LAE+Q + ++
Sbjct: 60 VANLSAETSGTVRSVGALEGEHVTAGQKILQFSSPQPEFAVREAKAALAEQQAQTHDNKL 119
Query: 133 TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK----EDYELVQQ 188
RR R +E L+ E I+R++ +A+ + EL++Q
Sbjct: 120 ---------------------RRTR----KENLFREGAISRQELDEAEKMSIQGEELLRQ 154
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVV 248
K ++Q+ ED+L + L V + G L L V
Sbjct: 155 K---------------ALQLQMREDDL--------------KKLTVSAPFAGILTLQSVK 185
Query: 249 LGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG---GNFELSVRKVY 305
G V+ + ++ D S Y + +DE I R++ G A T F+ +V ++
Sbjct: 186 EGDYVAANSLVARVVDPSAYVVTVEVDELDIPRIRFGQATTVAFDAWPDKRFKATVSRIV 245
Query: 306 PEV-RDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFV 364
+ R K ++ +I++G T N+ ++++ K + F+ + ++
Sbjct: 246 QQTDRVTKTSRIYLKLDHPATDIQAGMTATANIIYNIRPNALLVRKSSLFEENAQSTVWK 305
Query: 365 LDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+ K ++ +R G + + E+L+GL+ G+++ ++
Sbjct: 306 IANG--KLKKQPVRTGASDLTFVEILQGLKKGDKIALA 341
>gi|83646481|ref|YP_434916.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
gi|83634524|gb|ABC30491.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
Length = 364
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 79/360 (21%), Positives = 147/360 (40%), Gaps = 84/360 (23%)
Query: 53 VTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVV----EEGAQVRRGDIIVRLSNSN 108
V + D + G V V ++P+ + EKVV ++GA V+RGD++++L +
Sbjct: 38 VQSAPYYDKIEALGTVNANESVNITPK----ITEKVVSVHFDDGASVKRGDLLIKLDDE- 92
Query: 109 LDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDE 168
E+Q LR+T + R+ YR+ ++LY+
Sbjct: 93 -------------EEQANLRSTLAVQAE------------------RESAYRRAQELYNR 121
Query: 169 KLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRER 228
++ + D A+ ++DQ + + IR R
Sbjct: 122 RVGSEADLDAARA-------------------------RVDQSQAEIE-------AIRTR 149
Query: 229 KENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL-- 286
+ + +G LGL + +G V P + ++DLS K++ I ++ +K GL
Sbjct: 150 IAAHQITAPFNGVLGLRHISVGALVEPSDVLTTLDDLSVVKVDFAIPSVFLANLKPGLKV 209
Query: 287 -AATFERQGGNFELSVRKVYPEV----RDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQ 341
A T G F ++ + P V R + R F G + +G ++LQ +
Sbjct: 210 EAETSAYPGQTFTGELKSISPRVDPVTRTVQARAAFNNPGRM---LLTGMLLQLDLQ-SR 265
Query: 342 PTESIIIPKGTFFQSTGGNWIFVLDK-DGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
P +++IP+ +++F++ + KA RR++ IG + E+L+GL G+ VV
Sbjct: 266 PRTALVIPESAISTVGTSHYVFLVTAGETSKAQRRQVDIGSRKAGKVEILQGLNEGDLVV 325
>gi|78221879|ref|YP_383626.1| Secretion protein HlyD [Geobacter metallireducens GS-15]
gi|78193134|gb|ABB30901.1| Secretion protein HlyD [Geobacter metallireducens GS-15]
Length = 335
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 53 VTHEQFND--FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLD 110
VT ND V V G ++ +T V++S + G V+E++V+EG V+ G ++ RL + +L
Sbjct: 22 VTRRTGNDSSTVAVSGTIE-LTEVEVSFKIPGRVRERLVDEGELVKAGQVVARLDDDDLR 80
Query: 111 LQILNAEAELAEKQNLLRNTQVTM-EQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEK 169
L++ E + LR + ++D +R ++ + R + + +QE L+
Sbjct: 81 LEVAQRERDTEAMAANLRELETGFRKEDIVRADAAVNRVKAETDRLKADFARQEALFRRD 140
Query: 170 LIAREDFLQAKEDYELVQQKHALIIERLHQDSIY----RSIQMDQMEDNLANMRRNVLLI 225
+I+R D+ AK +E Q A + E + Q + R Q+D R + L
Sbjct: 141 VISRRDYDAAKAAHESSQ---AALREAVAQQELMHRGPRKEQIDAARARFGQARETLELA 197
Query: 226 RERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG 285
R R + + + G + V G+ V+ G I + D+ + + A I E + RVK G
Sbjct: 198 RTRLGYTTLAAPMAGLVLAKHVEPGEQVAAGTPIISVGDMPNTWMRAYIAETDLGRVKVG 257
Query: 286 LAA 288
A
Sbjct: 258 QKA 260
>gi|67939290|ref|ZP_00531796.1| Secretion protein HlyD [Chlorobium phaeobacteroides BS1]
gi|67914495|gb|EAM63837.1| Secretion protein HlyD [Chlorobium phaeobacteroides BS1]
Length = 390
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 88/404 (21%), Positives = 177/404 (43%), Gaps = 47/404 (11%)
Query: 20 VGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQ--VQPITVVQLS 77
+G IAFL++ +I S L+VD+ + G + + +DG+ + ++
Sbjct: 9 IGAIAFLVVAAILIVVMRPSPLQVDSESVFRGEL-------IITLDGEGSTRVRDSYTVA 61
Query: 78 PEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQD 137
G V+ +EEG VR+ ++ R+++ L+ + E E Q R+ + +E
Sbjct: 62 SPVNGRVERIRLEEGEVVRKNSVVARVTSPPLNAR------EFEEAQARARSAEALLEAV 115
Query: 138 RLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERL 197
R + Q+++D+ + +R +++ LY + ++ E + A+ ++++Q+++ RL
Sbjct: 116 RAGER----QVEIDLRQAERKFKRYSNLYRKGAVSSETYEDARTAWQVLQKQYQ--AARL 169
Query: 198 HQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQ 257
+ +S + + R+ + E ++++ + G + + + V G
Sbjct: 170 NVESARYDL----------DAARSAINQSESGTSVDISAPDSGRVLRIFEKSERVVPAGT 219
Query: 258 KIGQINDLSDYKIEALIDEHYIDRVKA--GLAATFERQGGNFEL--SVRKVYPEVRDG-- 311
+ +I D + IE +ID D VK G+ E GG L VR V P
Sbjct: 220 PLFEIGDSRN--IEVVIDVLSADAVKVEPGMQVQVEEWGGGTVLFGKVRTVEPAAFTKIS 277
Query: 312 ----KFRTDFVFTGERPDNIRSGQTYYINLQ--LGQPTESIIIPKGTFFQSTGGNWIFVL 365
+ + + D ++ G + + + L + + + +P + F+ G +F++
Sbjct: 278 ALGIEEKRVNIIVDLADDEVKLGDNFRVQAKIVLWKGEDILQVPVSSIFRGNEGWNVFMI 337
Query: 366 DKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKN 409
+ G +A I IGR+ Y EVL+GLE GE VVI N
Sbjct: 338 N--GSRAEIVPITIGRRGAYYAEVLDGLEEGEEVVIHPTNDLDN 379
>gi|83591143|ref|YP_431152.1| Secretion protein HlyD [Moorella thermoacetica ATCC 39073]
gi|83574057|gb|ABC20609.1| Secretion protein HlyD [Moorella thermoacetica ATCC 39073]
Length = 399
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 82/360 (22%), Positives = 148/360 (41%), Gaps = 41/360 (11%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V V G + P + + G V + G +VR G ++V + L Q+ AEA +
Sbjct: 50 VEVTGALVPARTANVVSKLSGQVTAVKADVGDRVRAGQVLVEIDTKELQAQLQQAEAAVR 109
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLI-------ARE 174
Q+ ++ M+ R+ K+ LD Q+ Y + + L D A+
Sbjct: 110 SVQDQAEQARIGMDSARVAIANAKVALD----AAQKYYDRIKALADAGAASQSQLDDAQT 165
Query: 175 DFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNV 234
QAK YE +++ ++ S LA V +I+ N ++
Sbjct: 166 KLDQAKNGYEAANKQYEAAQKQYETAS----------GSGLAQAEAAVNIIKVNMSNASI 215
Query: 235 RSQIDGELGLLDVVLGQNVSPG--------QKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
S I G VV +N++PG Q + I D S K++ + + + + G
Sbjct: 216 TSPITG------VVTNRNINPGEMAAPTSPQPLLTIADTSTLKLQGTVGQEAVPLLSTGQ 269
Query: 287 AATFERQ---GGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPT 343
T G F +V +V P R + P +++G T +L P
Sbjct: 270 KVTVTLDALPGREFTGTVTQVGPVAATTGQRFPVEISLPNPGELKAGMTARAVFKLAAP- 328
Query: 344 ESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISS 403
E +++P G +++FV+ K+G RR++ +G +N + +L+GL+AGE+V +++
Sbjct: 329 EGVVVPLAAVRTDNGQDYVFVV-KNGT-VERRQVVLGLKNDEQVMILKGLQAGEQVAVTN 386
>gi|148266239|ref|YP_001232945.1| efflux transporter, RND family, MFP subunit [Geobacter
uraniumreducens Rf4]
gi|146399739|gb|ABQ28372.1| efflux transporter, RND family, MFP subunit [Geobacter
uraniumreducens Rf4]
Length = 371
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 84/362 (23%), Positives = 143/362 (39%), Gaps = 41/362 (11%)
Query: 46 RGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLS 105
+G+S VT + + G V+ ++ GIV+ +EG +V RG ++ L
Sbjct: 40 KGLSTEKVTESDIPELLEAVGTVKSKNTALIAARISGIVRTISAKEGDRVARGKHLITLE 99
Query: 106 NSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKL 165
+ A A + E + R + + +L + T + + KL
Sbjct: 100 ANESSAAAEAASAAVEEAR---RGIDEALARKKLADTT---------------FDRFHKL 141
Query: 166 YDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLI 225
YDE+ + R++F + + EL Q A + E LA R N
Sbjct: 142 YDEQAVTRQEFDGRQTEKELAAQGLA------------------RAEARLAQARGNAKAA 183
Query: 226 RERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG 285
+ + I G + V +G V PG + + + +Y+++ + E + RVK G
Sbjct: 184 DAVAGYAKIAAPIAGIVTAKAVDVGMTVLPGMPLITVEEEGNYRLDVAVPETMLGRVKIG 243
Query: 286 LAATFERQGGNFELSVR--KVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPT 343
A +G + E S R +V P V D RT +RSG Y L
Sbjct: 244 DAVRVAIEGSDAETSGRVVEVVPTV-DPMSRTFIAKIDLAAKGLRSG-VYGRALFATGKR 301
Query: 344 ESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISS 403
+ ++IPK + ++V+DK+ + R ++ G+ E+L GL AGE VV +
Sbjct: 302 KGVLIPKSAVVERGALTLVWVVDKEHRVGMRL-VKTGKGVADKVEILSGLSAGELVVTAG 360
Query: 404 YE 405
E
Sbjct: 361 VE 362
>gi|150026154|ref|YP_001296980.1| Probable membrane fusion efflux protein [Flavobacterium
psychrophilum JIP02/86]
gi|149772695|emb|CAL44178.1| Probable membrane fusion efflux protein [Flavobacterium
psychrophilum JIP02/86]
Length = 445
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 100/456 (21%), Positives = 175/456 (38%), Gaps = 108/456 (23%)
Query: 14 KHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARG--ISIGHVTHEQFNDFVRVDGQVQPI 71
K YIV GIA ++G I+ + + +G + I +T + V G++QP
Sbjct: 3 KKTKYIVLGIAVTAIIG-AIYLKKSGAIGDSNKGKEVEIATITQRTVTETVSGTGKIQPE 61
Query: 72 TVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQ 131
V++S E G + V+EG V++GD++V++ N L Q LN + Q L NT+
Sbjct: 62 IEVKISSEVSGEIIALPVKEGQTVKKGDLLVQV-NPKLYTQGLN------KSQAGLSNTK 114
Query: 132 VTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHA 191
+ Q D + +Y + +KLYD+ +I+R ++ ++ YE Q
Sbjct: 115 AGLSQT-----------DAQFKEAKASYERSKKLYDKGIISRAEWDKSVATYESAQAA-- 161
Query: 192 LIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLN---VRSQIDGELGLLDVV 248
+ N++ + E KENL + + +DG + L V
Sbjct: 162 -------------------KQAAYYNVQSASATVNESKENLGKTAIYAPVDGTISKLGVE 202
Query: 249 LGQNV-----SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFE------------ 291
LG+ V G ++ ++ DL++ ++E ++E+ I ++ G A E
Sbjct: 203 LGERVLGTQQMAGTEMMRVADLNNMEVEVDVNENDIVKISIGDLAKVEVDAYLKKEFRGI 262
Query: 292 --------------RQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINL 337
Q NF++ VR + +D F+ RP G T +++
Sbjct: 263 VTSISNSASTALTADQVTNFKVKVRIIKDSYQDLMSGKPASFSPFRP-----GMTATVDI 317
Query: 338 QLGQPTESIIIPKGTFFQSTGGN---------------------------WIFVLDKDGK 370
+ I +P T + + V K G
Sbjct: 318 ITTRKENVIAVPISAVVMRTDTSASRKVLMVKDDNSDNSEQEPEVKNEKRYECVFVKMGD 377
Query: 371 KAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYES 406
K R + G Q+ Y EVL GL+ GE ++ Y +
Sbjct: 378 KVKLRIVTTGIQDDSYIEVLSGLKKGETIITGPYTT 413
>gi|37522064|ref|NP_925441.1| HlyD family secretion protein [Gloeobacter violaceus PCC 7421]
gi|35213063|dbj|BAC90436.1| HlyD family secretion protein [Gloeobacter violaceus PCC 7421]
Length = 433
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 88/368 (23%), Positives = 158/368 (42%), Gaps = 45/368 (12%)
Query: 62 VRVDGQVQPITVVQLSPEEGGI-VQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
+ V G + + + E G+ + + +VEEG +VRRG +V L++ L Q+ AEA L
Sbjct: 99 LEVTGSISAWDPLAIGAEASGLRIDQVLVEEGDRVRRGQTLVVLNDDILRAQLSQAEARL 158
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQR--TYRQQEKLYDEKLIAREDFLQ 178
A + +VT+ Q R + + QR + +Q + ++++ARE Q
Sbjct: 159 A-------SARVTVSQRRAALAKAQATANEARANLQRYQSLGKQGAISSQEVLARETLGQ 211
Query: 179 -AKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
A+ D + Q L I + Q+ Q+ LA R + +
Sbjct: 212 GAQADLDQAQ----LAITSAEASAQENQAQIAQLRAQLAQTR--------------ILAP 253
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN- 296
DG + D LG+ VS G+ + + + ++ A + E + +V AG +
Sbjct: 254 DDGLVAKRDARLGEIVSSGKVLFTLVRDNRLELRAQVPEMDLPKVTAGQSVLVTSDADRQ 313
Query: 297 --FELSVRKVYPEV----RDGKFRTDF-VFTGERPDNIRSGQTYYINLQLGQPTESIIIP 349
VR++ P++ R G R D +G RP GQ ++LG +++++P
Sbjct: 314 IVVTGRVRQITPQIDERTRLGVVRIDVPSVSGLRPGMFVRGQ-----VRLGS-QKALLVP 367
Query: 350 KGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKN 409
+ +FVL G++A R + G +N E+ GL+ GERV+++ K+
Sbjct: 368 AQAVLSGEDSSQVFVL--VGEQARTRTVSAGARNGDSVEIKSGLKPGERVIVAGAGYLKD 425
Query: 410 SEILILSK 417
+ + L K
Sbjct: 426 GDYVRLPK 433
>gi|67938718|ref|ZP_00531239.1| Secretion protein HlyD [Chlorobium phaeobacteroides BS1]
gi|67915076|gb|EAM64403.1| Secretion protein HlyD [Chlorobium phaeobacteroides BS1]
Length = 360
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 92/395 (23%), Positives = 158/395 (40%), Gaps = 65/395 (16%)
Query: 19 IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSP 78
I G+ FL+ + ++I R + + + V + V G V + LS
Sbjct: 13 IALGVIFLITIVYLI-------TRGNTVSVEVHPVRKMELARAVYATGYVDADAMADLSS 65
Query: 79 EEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDR 138
E G V G V +G I+ L L A A AE+
Sbjct: 66 ELSGTVGFVGALAGEWVTKGSAILEFDERQLQLAFEEAGAAYAEQ--------------- 110
Query: 139 LRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLH 198
R++TE L++ +R+R+ L I+R+D +A+++Y Q K L L
Sbjct: 111 -RSETEDLRI-----KRERS----RNLLQAGAISRQDLEEAEKEY--FQAKKLLRQREL- 157
Query: 199 QDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQK 258
Q++ ++R+ + VRS I+G L L + G ++
Sbjct: 158 -----------QLKSRQNDLRKKI-----------VRSPINGVLTLQNAKAGDYIAANTL 195
Query: 259 IGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG---GNFELSVRKVYPEVRDGKFRT 315
+ ++ D + Y I +DE + R+K G A F V +V P+ D +T
Sbjct: 196 VARVVDTTSYMINVEVDELDVLRLKTGQRAAIALDALPEKRFSAKVSRVVPQT-DKITKT 254
Query: 316 DFVFTG--ERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAY 373
V+ E + I+ G T N+ +++P + F+ G + FV +K
Sbjct: 255 SRVYIKLEEHVEGIQIGMTATANIIYSVRNGVLLVPVSSVFEEAGSD--FVWKIVNRKLQ 312
Query: 374 RRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
++KI G + +Y EVLEGL G+ VV++ E ++
Sbjct: 313 KQKIVRGASDIRYIEVLEGLAEGDSVVVTPEERFR 347
>gi|110638901|ref|YP_679110.1| cation efflux system protein/acriflavin resistance protein B family
[Cytophaga hutchinsonii ATCC 33406]
gi|110281582|gb|ABG59768.1| cation efflux system protein/acriflavin resistance protein B family
[Cytophaga hutchinsonii ATCC 33406]
Length = 371
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 75/357 (21%), Positives = 146/357 (40%), Gaps = 69/357 (19%)
Query: 52 HVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDL 111
V + F ++++ G++ V++S GG V + V +G QV++G ++ +
Sbjct: 70 QVKKKPFTHYLQIQGKIDSDKNVEISSSVGGSVDQVYVVKGQQVQKGALLAK-------- 121
Query: 112 QILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLI 171
+ L++ Q +Q L N+ Y +Q++L+D+++
Sbjct: 122 ---------TDGDQLMKGIQEVDKQLELLNQL---------------YDKQKRLWDQQIG 157
Query: 172 AREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKEN 231
+L AK E + + A + E+ + SI
Sbjct: 158 TEVQYLNAKNQKEAAESRKATLQEQYSKTSI----------------------------- 188
Query: 232 LNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFE 291
R+ G + + GQ ++PG ++ + D K+ A + E Y+ +VK A
Sbjct: 189 ---RAPFSGVIDEVYTKEGQMLAPGMPAFRLVNTGDLKLVAAVSESYVSKVKVNQEAIVT 245
Query: 292 RQGGNFELSVR-KVYPEVRDGKFRTDFVFTGERPDN--IRSGQTYYINLQLGQPTESIII 348
N E+ R KV +V D RT V + D +++ YI ++ I+I
Sbjct: 246 FPDINKEIKTRVKVVGDVIDPTNRTFQVDLDLKQDKNLLKANMISYIKIKDYSNPAVIVI 305
Query: 349 PKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYE 405
P ++ N+++V+ DG + +R I +G+ EVL+GL+ GE+++ Y+
Sbjct: 306 PVNLVQRNNDKNYVYVV--DGNISAKRFITLGQYYDNSVEVLDGLKEGEKLITIGYQ 360
>gi|121533334|ref|ZP_01665162.1| efflux transporter, RND family, MFP subunit [Thermosinus
carboxydivorans Nor1]
gi|121307893|gb|EAX48807.1| efflux transporter, RND family, MFP subunit [Thermosinus
carboxydivorans Nor1]
Length = 366
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 24/263 (9%)
Query: 171 IAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMED-------NLANMRRNVL 223
+A++ +A+ +Y+ VQ + + Q++I R + +D +E +L++ N+
Sbjct: 112 MAQDAVTRAQANYDNVQADYQRYLTLYQQNAISRQM-LDSVETRLKVAQADLSSAYANLS 170
Query: 224 LIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVK 283
R++ V + +DG + +GQ V+ G ++ + D+++ I++ V+
Sbjct: 171 SARQQYGYATVTAPVDGIVANKTATIGQVVAAGMQLLTVEDINNVYAVVNIEQKDAGAVR 230
Query: 284 AGLAATFERQ---GGNFELSVRKVYPEVRDGK--FRTDFVFTGERPDN----IRSGQTYY 334
G A G F V + P FRT DN ++ G
Sbjct: 231 VGQTAEITVDAYPGRTFTGKVAVINPAAGASSRMFRTKIAI-----DNAEGLLKPGMFVK 285
Query: 335 INLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLE 394
+ L G+ + +P+ FQ G +++V+D G KA RR++ IG Y E+ GL
Sbjct: 286 VQLITGEEAPVLTVPQAALFQKQGLYYVYVVD--GDKAVRRQVEIGAPLGDYIEIKSGLT 343
Query: 395 AGERVVISSYESYKNSEILILSK 417
AG+ V I++ K+ + + ++K
Sbjct: 344 AGQLVAITNVNKLKDGDAIFVAK 366
>gi|126660817|ref|ZP_01731912.1| Secretion protein HlyD [Cyanothece sp. CCY0110]
gi|126617914|gb|EAZ88688.1| Secretion protein HlyD [Cyanothece sp. CCY0110]
Length = 421
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 92/379 (24%), Positives = 164/379 (43%), Gaps = 34/379 (8%)
Query: 56 EQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILN 115
+ D + G QP+ V L + G + V+ G +V +G ++ +L +S L Q+
Sbjct: 55 DSIRDAIEYIGTTQPVQTVALRSQVEGQLLRLTVDVGDRVTQGQLLAQLDDSLLQAQVGK 114
Query: 116 AEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIARED 175
AEAELA + + + Q ++ + K+QL+ + + + ++LY+E IA +
Sbjct: 115 AEAELATLNSEVISAQGEVKSAISAVASAKVQLE----QAKNDVDRLQELYEEGAIALRE 170
Query: 176 FLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLN-- 233
A+ Y QQ L S++ +E + LI++ +E L+
Sbjct: 171 VELARTAYLTAQQT-------LSSARSEVSVRQSAVEAAKGRVIAQQSLIQQEQERLSYT 223
Query: 234 -VRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAA---- 288
+ S I G + + G V PG +I ++ D S K+ + E + +++G +
Sbjct: 224 RLNSPITGYVLQRVIETGNLVQPGSEILRLGDFSQVKVVVPVSELDLANIRSGQSVRVRL 283
Query: 289 -TFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDN-IRSGQTYYINLQLGQP-TES 345
F R +F V + P + P+ I SG + GQ ++
Sbjct: 284 DAFPRD--SFVGRVSNISPAADPTSRQVPIEVILANPEQKISSG--LLARVSFGQTGSQP 339
Query: 346 IIIPKGTFFQSTGG------NWIFVLDKDGKKAY--RRKIRIGRQNPQYYEVLEGLEAGE 397
+IIP+ T Q++G +FV+ D K A R +R+G + EVL GL GE
Sbjct: 340 VIIPE-TALQTSGNATTGERGTVFVVRGDKKNAMVTERMVRLGERIDGQVEVLGGLRPGE 398
Query: 398 RVVISSYESYKNSEILILS 416
R V S ++ K+++ + LS
Sbjct: 399 RYVSRSSDALKDNQSVKLS 417
>gi|55509027|gb|AAV52812.1| probable RND efflux membrane-fusion protein precursor [Burkholderia
glumae]
Length = 379
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 18/256 (7%)
Query: 160 RQQE---KLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQD--SIYRSIQMDQMEDN 214
RQ E +LYD+ A+ LQAK + Q + + + + S++ Q D +
Sbjct: 91 RQGEPLVQLYDDPERAQLASLQAKAVFAKSQLARSQTLAPVGAEPRSVFDQHQFDYRSAS 150
Query: 215 LANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALI 274
A+ R+ +IR++ VR+ GE+G+ V LGQ ++ G+ I + DL +
Sbjct: 151 -ADARQVEAVIRQKL----VRAPFAGEIGIRQVNLGQYLNAGEAIATLTDLDTLYANFTL 205
Query: 275 DEHYIDRVKAGLA---ATFERQGGNFELSVRKVYPEVRDGKFRTDFVFT-GERPDNIRSG 330
+ Y+ +++ G A AT G +F V + P V D T R +R G
Sbjct: 206 PQKYVGQLRVGQAVHLATDAYPGRDFVGKVTTIEPRVGDATRNVTVQATLDNRGHPLRPG 265
Query: 331 QTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAY----RRKIRIGRQNPQY 386
++ L L + + +P S G+ + V++K + RK+R G
Sbjct: 266 MYAHVTLDLPSRPDVLSVPDTAVQSSQDGDMVAVVEKPNAQGIGTVALRKVRTGIAGGGR 325
Query: 387 YEVLEGLEAGERVVIS 402
EVLEGL AGE V+ +
Sbjct: 326 IEVLEGLRAGEVVLTA 341
>gi|126647871|ref|ZP_01720376.1| hypothetical protein ALPR1_07865 [Algoriphagus sp. PR1]
gi|126576547|gb|EAZ80825.1| hypothetical protein ALPR1_07865 [Algoriphagus sp. PR1]
Length = 370
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 69/343 (20%), Positives = 158/343 (46%), Gaps = 37/343 (10%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDL-----QILNA 116
V G ++ + G +QE VEEG V G ++ + N L +I A
Sbjct: 45 VYASGNIKAVNQYDAFTNASGPIQEIFVEEGDSVSIGTPLLAVYNEREKLSRESAEINKA 104
Query: 117 EAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDF 176
A+L Q+ LR+ Q+ ++ ++ + + + L + +Q+ L+D+ + +F
Sbjct: 105 YADLQANQSKLRDLQLAIDMNKSKMQNDSL-----------LFVRQKALHDQNIGTDVEF 153
Query: 177 LQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRS 236
Q K ++E + + + R Y+ ++ ++E N N +N+ + + + + ++S
Sbjct: 154 EQKKLNWENSKTAYESALIR------YQDLKR-EIEFNSNNASKNLAISKVLESDYVLKS 206
Query: 237 QIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG---LAATFERQ 293
+I+G++ + G+ V+P + + DY +E +DE+ I ++K G + + +
Sbjct: 207 KINGKVYAILKEKGEMVTPQVALAVLGSADDYLLELQVDEYDISKIKLGQVVMVSMDSYK 266
Query: 294 GGNFELSVRKVYP--EVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKG 351
FE V+K+YP + + F+ + FT + P + + N+ ++ +IP+
Sbjct: 267 EQTFEAVVQKIYPIMDTQTKSFKVEAKFT-KAPPQLYPNLSLEANIITEVRIKAKVIPRN 325
Query: 352 TFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLE 394
+ V++++ +++G +N Q+ ++LEG++
Sbjct: 326 YLLFDS-----LVINENEDTI---PVKVGIKNYQFAQILEGID 360
>gi|153809409|ref|ZP_01962077.1| hypothetical protein BACCAC_03723 [Bacteroides caccae ATCC 43185]
gi|149127995|gb|EDM19217.1| hypothetical protein BACCAC_03723 [Bacteroides caccae ATCC 43185]
Length = 344
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 11/240 (4%)
Query: 52 HVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDL 111
H+ + ++ D +V + PI G +++ EE QVR+GD +V + ++ L
Sbjct: 32 HLGNIEYTDNAQVKQHITPINT-----RVPGFIKKICFEEYQQVRKGDTLVIIEDAEFRL 86
Query: 112 QILNAEAELAEKQNLLRNTQV---TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDE 168
++ AEA+LA + T + T + + + ++ + + QR + EKL E
Sbjct: 87 RVAQAEADLANATAGRQATTIGIATTQNNLSVSDASIEEVRVQMENAQRELNRFEKLLQE 146
Query: 169 KLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRER 228
+ ++ + YE + ++ + S+ +S Q ++ N A +R +
Sbjct: 147 DAVTKQQYDNVHTAYETAKARYEQVSRAKQSTSLVKSEQTHRLGQNEAGVRLAKAALELA 206
Query: 229 KENLN---VRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG 285
+ NL+ + + DG G +++ GQ V PGQ + I D SD + A E + ++ G
Sbjct: 207 RLNLSYTVIIAPCDGTTGKKEILEGQLVQPGQTMVDIVDSSDLWVIANYRETQLSNIREG 266
>gi|153889537|ref|ZP_02010648.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
TAV2]
gi|151584418|gb|EDN47860.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
TAV2]
Length = 453
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 41/229 (17%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G++QP V++SPE G + E EGA V++GD++ R+ N Q+ EA LA
Sbjct: 60 VSATGKIQPEVEVKISPEVAGEIIELPFREGADVKKGDLLFRIKPDNYQAQVEQQEAALA 119
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ Q LQ + + + +R+ +L+ + LI+ D L A
Sbjct: 120 DAQ------------------ARHLQAKSQLIKAEADHRRAAELFKKGLISDSDQLNAST 161
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
+ ++ + +E + Q+ + E L M R+ + V S IDG
Sbjct: 162 ELDIARTS----VEA-------AAAQIRRAEGTLKQM-------RDLLDKTTVYSPIDGT 203
Query: 242 LGLLDVVLGQNVS-----PGQKIGQINDLSDYKIEALIDEHYIDRVKAG 285
+ LL LG+ V G +I ++ +L D ++ ++E+ I VK G
Sbjct: 204 ISLLSSELGERVVGTGQFAGTEILRVANLGDMEVRVKVNENDIINVKIG 252
>gi|121533547|ref|ZP_01665375.1| secretion protein HlyD family protein [Thermosinus carboxydivorans
Nor1]
gi|121308106|gb|EAX49020.1| secretion protein HlyD family protein [Thermosinus carboxydivorans
Nor1]
Length = 342
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
D R+ G T+V +S + G V E +V+EG QV+ G II R+ N ++ A+AE
Sbjct: 44 DDARISG-----TIVNVSAKISGKVVELLVKEGDQVKAGQIIARIDNR--EILAQKAQAE 96
Query: 120 LAEKQNLLRNTQVT-----MEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLI--- 171
A R +V E ++ R ++ + +LD Q+ Y + EKLY + I
Sbjct: 97 AALAAAKARYEEVVAGARPQEIEQARAALDQARANLD--NAQKNYERMEKLYKDGAISAA 154
Query: 172 ----AREDFLQAKEDYELVQQKHALIIERLHQDSIY-RSIQMDQMEDNLANMRRNVLLIR 226
A + A+E Y +K L I +++I + Q+ Q E L NV+
Sbjct: 155 QRDNAETAYAVAREAYNAASEKLDLTIAGAREETIRAAAAQVKQAEAALEAA--NVM--- 209
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG 285
+N V + + G + L V G+ V+ GQ I I D SD + A I+E IDR+K G
Sbjct: 210 --ADNTVVVAPVSGSVALKAVNPGEVVAAGQPIVSIVDPSDLWVNARIEETKIDRIKIG 266
>gi|91975948|ref|YP_568607.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
gi|91682404|gb|ABE38706.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
Length = 421
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 74/347 (21%), Positives = 141/347 (40%), Gaps = 18/347 (5%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G ++ V++ + G V + +V EG +VR G +V + S L ++ AE +A
Sbjct: 68 VVASGHIETPYRVEIGSQITGTVADVLVREGQEVREGQKLVAIEASELQAAMVQAEGAVA 127
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ + +R + E + Q ++ + Y + KL + A +
Sbjct: 128 QAEARVRQLR---ELTKPAADQALQQAHANLLNAEAAYERASKLAASGYGTKATLDDATK 184
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQ----MEDNLANMRRNVLLIRERKENLNVRSQ 237
+ ++ + + R + +Y S + E L R N+ R R ++ +
Sbjct: 185 NLDVARTQ-----VRTAELQVYTSSPVGSDYVMAETLLGQARANLNTARARLGYASIVAP 239
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG---LAATFERQG 294
DG L V G V PG+ + + D +I IDE + ++ G LA+
Sbjct: 240 RDGVLITRKVERGSVVQPGKALLVLAPAGDSQIVVQIDEKNLGQLALGQSALASADAYPD 299
Query: 295 GNFELSVRKVYPEVRDGKFRTDFVFTGERPDN-IRSGQTYYINLQLGQPTESIIIPKGTF 353
F + + P V + + P N +R T +++ + ++I+P
Sbjct: 300 KRFAARLSYINPSVDINRASVEIKLAVTDPPNYLRQDMTVSVDIATARRENAVIVPARAV 359
Query: 354 FQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
+T +VL + +A R+ +R+G + YEV+EGL G+RV+
Sbjct: 360 NDAT--TVPYVLKAENGRAIRQPVRLGLRGVGAYEVIEGLVPGDRVI 404
>gi|124003345|ref|ZP_01688195.1| secretion protein HlyD [Microscilla marina ATCC 23134]
gi|123991443|gb|EAY30874.1| secretion protein HlyD [Microscilla marina ATCC 23134]
Length = 439
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G++QP V++SP+ G + E +VEEG V +G +++++ NL + N++A L
Sbjct: 38 VSASGKIQPEIEVKISPDVSGEIMEVLVEEGDSVVKGQLLLKIRPDNLQAALDNSQAIL- 96
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
N + + E + K E +L L+ R +KLY++K+I+ DF A+
Sbjct: 97 ---NSRKASTAQAEAAYYQRKAEYGRLKLEFER-------SKKLYEQKVISEADFQLAEA 146
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
++ + +Q+ + + + NL N+ R +V S ++G
Sbjct: 147 NFNVAKQQLTSAKQNIEATKFNAQSAAANVTQNLDNLSRT-----------SVFSPVNGT 195
Query: 242 LGLLDVVLGQNV-----SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFE 291
+ L+V G+ V G ++ +I +L++ +++ ++E+ I RV+ A E
Sbjct: 196 ISKLNVEKGEKVVGTAQMAGTEMLRIANLNNMEVQVDVNENDIVRVELKDTAVIE 250
>gi|146299432|ref|YP_001194023.1| efflux transporter, RND family, MFP subunit [Flavobacterium
johnsoniae UW101]
gi|146153850|gb|ABQ04704.1| efflux transporter, RND family, MFP subunit [Flavobacterium
johnsoniae UW101]
Length = 429
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 100/452 (22%), Positives = 188/452 (41%), Gaps = 100/452 (22%)
Query: 11 IRKKHLPYIVGGIAFLLLVGWMIFGNHASTL--RVDARGISIGHVTHEQFNDFVRVDGQV 68
+ KK + + VGG L+L+ ++ + A + + + + + VT + V G++
Sbjct: 1 MSKKIVYFSVGGA--LVLIALLVSLSKAGVIGNKDEGKEVETSKVTASTIVETVSATGKI 58
Query: 69 QPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLR 128
QP V+LS G + V+EG V++GD++V++ N DL E +A L
Sbjct: 59 QPEIEVKLSSMVSGEIIALNVKEGQVVKKGDLLVKI---NPDLYTSGLERSVAN----LS 111
Query: 129 NTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ 188
T+ + Q K K Y + + LYD+ +I++ D+ +A YE+ +
Sbjct: 112 GTKAGLVQSEASFKEAK-----------ANYERNKTLYDKGVISKSDWDKAISTYEVAKA 160
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVV 248
Q++ Y N+ + +V R+ + + DG + +L+V
Sbjct: 161 T--------KQNAYY----------NVQSASASVTEARDNLGRTTIYAPADGTISVLNVE 202
Query: 249 LGQNVSPGQKIG-----QINDLSDYKIEALIDEHYIDRVKAGLAATFE------------ 291
LG+ V Q++ ++ +L++ ++E ++E+ I ++K G A E
Sbjct: 203 LGERVLGTQQMAGTELLRVANLNNMEVEVDVNENDIVKIKIGDEANVEVDAYLKKKFKGV 262
Query: 292 --------------RQGGNFELSVR---KVYPEVRDGK------FR------TDFVFTGE 322
Q NF++ VR + Y ++ +GK FR D + T +
Sbjct: 263 VTSISNSASTTLTSDQVTNFKVKVRILKESYQDLLEGKPDAYSPFRPGMTATVDIITTTK 322
Query: 323 R-----PDN---IRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYR 374
P + ++S T + ++ P E PK + + V K G KA
Sbjct: 323 NNVLAVPISSVVVKSDTTAVKDFKVDDPNEKKTTPK------SDKKFECVFVKVGDKAKI 376
Query: 375 RKIRIGRQNPQYYEVLEGLEAGERVVISSYES 406
R I+ G Q+ EV+ GL++G+ V+ Y +
Sbjct: 377 RIIKTGIQDDTNIEVMSGLKSGDVVITGPYTT 408
>gi|147679121|ref|YP_001213336.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
gi|146275218|dbj|BAF60967.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
Length = 402
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 83/390 (21%), Positives = 162/390 (41%), Gaps = 47/390 (12%)
Query: 44 DARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVR 103
DA + H + V G+++ + + P+ G V VE G+QV GD++V
Sbjct: 37 DAVAVDKAMARHGKLTGGTVVTGKLEALHSANVVPKMAGKVASITVEVGSQVAEGDLLVS 96
Query: 104 LSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQE 163
L + L + A+L + RN+ + ++ + + R Y + +
Sbjct: 97 LDAAELAALVDLYAAQLDKA----RNSDLPAQKTQAELALANAEAAYKTARAD--YERSK 150
Query: 164 KLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVL 223
+L + +I+++ F QA++ Y Q + A + D + + + A +R+
Sbjct: 151 QLREAGVISQQQFEQAEKMY--TQAEAAFKAAQESLDILVNATIPQTIRQFEAQLRK--- 205
Query: 224 LIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVK 283
+ N +R+ + G + +V G+ SPGQ + I L ++A + E I+ +K
Sbjct: 206 -AQADYANSIIRAPVGGVVTARNVNPGEMASPGQPVVTIVALDPLVVQADVTEDQINYIK 264
Query: 284 AGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQP- 342
G EL VR VRD F T V N S + Y + +Q+ P
Sbjct: 265 VGQ-----------ELKVR--VSSVRDEPF-TGIVTNISLAAN-PSTKAYPVKIQISNPE 309
Query: 343 -----------------TESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQ 385
E II+P+ F++ N+++V+ DG + RR++ +G+ + +
Sbjct: 310 HVLKPGMFAEVFLNTKEEEGIIVPREAVFKAEDKNFVWVIG-DG-RVMRREVAVGQSDGR 367
Query: 386 YYEVLEGLEAGERVVISSYESYKNSEILIL 415
+ GL GE V ++ + ++ +++
Sbjct: 368 NVIISSGLAEGEEVAVTGIDDLEDGTKVVV 397
>gi|67918318|ref|ZP_00511917.1| Secretion protein HlyD [Chlorobium limicola DSM 245]
gi|67783974|gb|EAM43354.1| Secretion protein HlyD [Chlorobium limicola DSM 245]
Length = 361
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 82/400 (20%), Positives = 158/400 (39%), Gaps = 61/400 (15%)
Query: 13 KKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPIT 72
+K LP +A + L +T+ V+A VT+ + V G V+
Sbjct: 5 QKLLPKYTIALAIVFLATVTYLVTRGNTVDVEAE-----EVTYAELVQAVYATGFVEADA 59
Query: 73 VVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQV 132
V LS E G V+ EG +V G I+ L + +L + A A E+ L+ T+
Sbjct: 60 VANLSAELSGTVRSVGALEGERVSAGQTIITLDSPQPELAVREARAAYDEQLALVVGTK- 118
Query: 133 TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
++ R RN L+ E ++R+D A+++ + +
Sbjct: 119 -LKCIRARN-----------------------LFGEGAVSRQDLDDAEKNRKQAE----- 149
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQN 252
E L Q + IQ D+++ L V + DG L L + G
Sbjct: 150 --ELLEQKRLRLKIQEDELK------------------KLTVTAPFDGVLALQSLKTGDY 189
Query: 253 VSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG---GNFELSVRKVYPEVR 309
V+ + ++ D S Y + IDE + R++ G A F+ V ++ P+
Sbjct: 190 VTANTLVARVIDTSGYVVNVEIDELDVPRIRPGQKAVIVFDAMPEKRFDAIVSRIVPQTD 249
Query: 310 DGKFRTDFVFTGERP-DNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKD 368
+ P +++G T N+ + ++++ K + F ++++ ++ D
Sbjct: 250 TVTKTSKVYLQFTAPIQAVQAGMTATANIIYNTRSRALLVRKSSVFDENHVSYVWKIEND 309
Query: 369 GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
K ++ ++ G + + EV++GL G+RV+ E ++
Sbjct: 310 --KLKKQALKTGAGDLAFVEVIDGLRKGDRVIPVPQERFR 347
>gi|68551938|ref|ZP_00591331.1| Secretion protein HlyD [Prosthecochloris aestuarii DSM 271]
gi|68241061|gb|EAN23329.1| Secretion protein HlyD [Prosthecochloris aestuarii DSM 271]
Length = 371
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 85/353 (24%), Positives = 141/353 (39%), Gaps = 58/353 (16%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G V + L E G V + EG +V++GD I+ + L L + AEA L+
Sbjct: 52 VYATGYVDADIMADLRTEISGTVGKVGFLEGERVKKGDKILEFDDRQLQLLVQEAEAALS 111
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
E+Q + + + + + R ++ R RQQ L D A F+QA
Sbjct: 112 EQQAAVNDAMLKLRRSR------------NLYRMGAVSRQQ--LDD----AENTFVQADR 153
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
L+QQ R +Q + D L L V + IDG
Sbjct: 154 ---LLQQ---------------RRLQHESSLDALTK--------------LFVEAPIDGV 181
Query: 242 LGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG---GNFE 298
L L + G +S + + D S Y + IDE + ++K G AT F
Sbjct: 182 LALQNARAGDFLSSATLVATVIDTSSYVLNVEIDELDVPKLKVGQLATIALDAFSDDRFH 241
Query: 299 LSVRKVYPEVRDGKFRTDFVFTG--ERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQS 356
V ++ P+ D +T V+ E I+ G T N+ ++++PK F+
Sbjct: 242 ARVERIVPQT-DKVTKTSRVYLALQEPVRGIQVGMTATANIIYSTIEGALLVPKTAVFEE 300
Query: 357 TGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKN 409
+++ +D K ++ I G + Y+EV GL G+ VV++ E +++
Sbjct: 301 ERRQYVWKIDDGLLK--KQLITPGASDLIYFEVTNGLSGGDLVVLNPEERFRD 351
>gi|120556402|ref|YP_960753.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
VT8]
gi|120326251|gb|ABM20566.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
VT8]
Length = 365
Score = 62.0 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 80/369 (21%), Positives = 149/369 (40%), Gaps = 89/369 (24%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
IS+ E + ++ G V+ I ++++ E G+++ E G V++GD++VRL
Sbjct: 45 ISVTEAITENWQPAIKAVGSVEAINGIEVANEVPGVIESINFESGDTVKQGDVLVRLD-- 102
Query: 108 NLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYD 167
+++ LR + + QL Q+ +++ L
Sbjct: 103 ------------------------AAIDEAALRTRRAEAQL------AQQEFKRISDLLP 132
Query: 168 EKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE 227
+ +++ + +AK +Y+ + + + E
Sbjct: 133 RRAVSQSQYDEAKANYDAARAR-----------------------------------VNE 157
Query: 228 RKENLN---VRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKA 284
+ LN +++ DG+LG+ V GQ + G I +IN L ++ + E Y+ V
Sbjct: 158 AEAQLNKKVIKAPFDGKLGIRMVDQGQYIGTGTPIVEINMLHPIYVDYTLSEKYLPDVDQ 217
Query: 285 G------LAATFERQ-GGNFELSVRKVYPEVRDGKFRTDFVFTGERPDN-IRSGQTYYIN 336
G +AA +R G+ V PE R + R + E DN +R G +
Sbjct: 218 GYPVSVTVAAVPDRTFEGDVSAINTSVNPETRTVRIRA--ILNNE--DNLLRPGM--FAT 271
Query: 337 LQLGQP--TESIIIPKGTFFQSTGGNWIFVLDKDGKKAY---RRKIRIGRQNPQYYEVLE 391
+Q GQP E + +P+ +T GN++FV++++ + RR + G V
Sbjct: 272 VQTGQPRDNEVVTLPREAISYNTYGNFVFVVEENDEGQLVVSRRSVTTGEVREGRASVTS 331
Query: 392 GLEAGERVV 400
GLE+GE VV
Sbjct: 332 GLESGETVV 340
>gi|146342764|ref|YP_001207812.1| Putative efflux transporter [Bradyrhizobium sp. ORS278]
gi|146195570|emb|CAL79597.1| Putative efflux transporter [Bradyrhizobium sp. ORS278]
Length = 431
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 83/398 (20%), Positives = 163/398 (40%), Gaps = 25/398 (6%)
Query: 15 HLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVV 74
H +I+ I L L GW S + + + V + V G V+ V
Sbjct: 36 HRWFILAVILLLGLGGWQ------SVRVMLGPAVVVDQVRSGDLVETVVASGHVETPFRV 89
Query: 75 QLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTM 134
++ + G V E +V EG +V RG ++ L + L ++ A+ ++A+ + +R +
Sbjct: 90 EIGSQITGTVDEVLVLEGQRVTRGQPLISLESRELKAAVVQAQGQVAQAEARMRQ----L 145
Query: 135 EQDRLRNKTEKL-QLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALI 193
+ L + E L Q + Q+TY + L R +A++ ++ AL
Sbjct: 146 AELTLPSAKEALRQAQATLLNAQQTYDRTSLLTANGYATRASLDEAQKTLDI-----ALA 200
Query: 194 IERLHQDSIYRSI----QMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVL 249
ER + ++ + E L R + + R + + DG L +V
Sbjct: 201 QERAAEFQVFTASPGGSDYVMAETQLNQARATLDTAQSRLGYATISAPRDGVLITRNVEK 260
Query: 250 GQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG---LAATFERQGGNFELSVRKVYP 306
G PG+ + + D ++ IDE + ++ G LA+ F + + P
Sbjct: 261 GTVAQPGKALLVLAPAGDVQLVLQIDERNLGKLALGQTALASADAYPDKRFPAVLSYINP 320
Query: 307 EVRDGKFRTDF-VFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVL 365
V + + + PD +R T +++++ +++ +P + T G +
Sbjct: 321 GVDLSRASVQVKLIVKDPPDYLRQDMTVSVDIEVASRKDTLELPVRSVHDLTSGQPWVLG 380
Query: 366 DKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISS 403
+KDG+ A +R +R G + + E+++GL AG+ V +S
Sbjct: 381 EKDGR-AVKRPVRAGIRGNSHVEIVDGLSAGDIAVPAS 417
>gi|94970558|ref|YP_592606.1| secretion protein HlyD [Acidobacteria bacterium Ellin345]
gi|94552608|gb|ABF42532.1| secretion protein HlyD [Acidobacteria bacterium Ellin345]
Length = 400
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 79/357 (22%), Positives = 157/357 (43%), Gaps = 29/357 (8%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G+V+PIT V++ + GIV++ VE G +V+ G ++ L + Q+ + +A+L
Sbjct: 55 VVATGKVEPITKVEIKSKASGIVKKLYVEYGDKVKAGQLLAELDKDEIIAQVRSQKAQLE 114
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
++ + E D R+K + +DI QR Y + + + + ++++ ++
Sbjct: 115 SAESNMH----AAEADYERSKVDA--AGVDIPTLQRAYERAKSMAKDGVVSQSALDDSQR 168
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
YE+ K + ++ + + Q + ++ + + + E+ + + IDG
Sbjct: 169 AYEMATNKQNVARAQVTVNKAKEA----QAQADVQKAQATLAQLNEQLSYTTIVAPIDGI 224
Query: 242 LGLLDVVLGQNVSPGQKIGQ-------INDLSDYKIEALIDEHYIDRVKAGLAATFERQG 294
+ DV +G VS +G + D S+ ++ +DE I +V G AA + +
Sbjct: 225 VLSRDVEVGDAVSSILVLGSSATLVMTLGDTSEVYVKGKVDESDIAKVYIGEAARIKVES 284
Query: 295 ---GNFELSVRKVYPEVRDGKFRTDF---VFTGERPDNIRSGQTYYINLQLGQPTESIII 348
F+ V K+ P + T F V +++ T + L + ++I
Sbjct: 285 FKDKTFQGKVTKISPMGVEKDNVTTFEVRVSINNPGGELKAAMTANAEIILEEHKNVLMI 344
Query: 349 PKGT-FFQSTGGNWIFVLD---KDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
P+G + + D KDGKK + ++IG N EVL GL+ ++VV+
Sbjct: 345 PEGAIIYDREKKASVETPDPKAKDGKK--KVAVQIGISNGAKTEVLSGLKEKDQVVL 399
>gi|148241496|ref|YP_001226653.1| Possible membrane-fusion protein [Synechococcus sp. RCC307]
gi|147849806|emb|CAK27300.1| Possible membrane-fusion protein [Synechococcus sp. RCC307]
Length = 400
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 84/385 (21%), Positives = 150/385 (38%), Gaps = 64/385 (16%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
+S + EQF + ++ + VQL+ G V E VEEG QV +G++++RLS+
Sbjct: 35 VSTAVLQPEQFRELGDYVATLEAVNQVQLAALADGRVVELPVEEGQQVEQGEVLLRLSSE 94
Query: 108 NLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYD 167
+++ A+AEL+ ++ + Q +E+DR R YR
Sbjct: 95 ERQAELIQAQAELSRRRADVAAVQADLERDR---------------RNFERYR------- 132
Query: 168 EKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE 227
+A+E +AL ++ + +++ +D + + + R
Sbjct: 133 --YLAKEG------------AANALDLDSFKASFLASQAKLEANQDLVEAAEAGLGVART 178
Query: 228 RKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLA 287
R + VR+ I G++ L V LG V I + I +R K GL
Sbjct: 179 RLDYKTVRAPISGQVSDLSVKLGDVVKERDPFTAIVRNDRLYTQITIPVTMAERTKPGLP 238
Query: 288 ATFERQGGNFELS---VRKVYPEVRDGK----FRTDFVFTGERPDNIRSGQTYYINLQLG 340
EL+ ++ V P+V+ + +F G R +RSG + G
Sbjct: 239 VWLLDPTNGIELAKGELKFVDPDVKVATQGLLAKAEFSNPGNR---LRSGMRVRTLVGFG 295
Query: 341 QPTESIIIPKGTFFQSTGGNWIFV-----------------LDKDGKKAYRRKIRIGRQN 383
+ + +P +S G ++++V L D A +R + +G
Sbjct: 296 S-SRQLAVPFDAVIRSAGQSFVYVIGPASELNAKQRQHFKQLKDDTPVALKRAVSLGPLQ 354
Query: 384 PQYYEVLEGLEAGERVVISSYESYK 408
Y VL GLE GE+++ S S +
Sbjct: 355 NSCYPVLSGLEPGEQLISSHLLSLR 379
>gi|123441826|ref|YP_001005810.1| putative HlyD family secretion protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122088787|emb|CAL11593.1| putative HlyD family secretion protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 371
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 85/392 (21%), Positives = 173/392 (44%), Gaps = 52/392 (13%)
Query: 22 GIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEG 81
IA L++ G+ I + + V + + + + +Q V G++ + V + +
Sbjct: 14 AIAVLIIGGFFIIRHLMAPTPVQFQTVKVANRDLQQN---VLATGKLDAVRKVDVGAQVS 70
Query: 82 GIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRN 141
G +++ VE G QV++G ++ A + + QN ++ + T++ +
Sbjct: 71 GQLEKLYVEIGDQVKQGQLL--------------AMIDPQQAQNQIKEVEATLQDLNAQL 116
Query: 142 KTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDS 201
K +L L T R+Q+ L + ++R+D QA AL +++ ++
Sbjct: 117 GQAKAELQLAAV----TLRRQQDLAKLQAVSRQDLDQAIT---------ALAVKKAQVET 163
Query: 202 IYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQK--- 258
I I + + AN+ + + + +DG++ + + GQ V Q+
Sbjct: 164 INAQINKTKASLDTANINLDYT---------KISAPMDGDVVQITTLQGQTVIAAQQAPN 214
Query: 259 IGQINDLSDYKIEALIDEHYIDRVKAGLAATFE---RQGGNFELSVRKVYP---EVRDGK 312
I + D+S + A + E + +K G+ A+F G F+ +++ + P +V D
Sbjct: 215 ILTLADMSTMLVNAQVSEADVIHLKPGMKASFTVLGDPGKRFDGALKDIQPTPEKVNDAI 274
Query: 313 FRTDFVFTGERPDNI-RSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN-WIFVLDKDGK 370
F + F PD + R T +++QL ++++IP G N + + KDGK
Sbjct: 275 FYSA-RFEVPNPDRLLRLQMTAQVSIQLANIPQAMVIPLSALGDELGTNRYQVAVLKDGK 333
Query: 371 KAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+ +R++ IG +N +V+ GL GE V++S
Sbjct: 334 EE-KREVTIGIRNNVDAQVISGLNVGEEVIVS 364
>gi|89073893|ref|ZP_01160400.1| membrane-fusion protein [Photobacterium sp. SKA34]
gi|89050428|gb|EAR55929.1| membrane-fusion protein [Photobacterium sp. SKA34]
Length = 376
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 78/357 (21%), Positives = 153/357 (42%), Gaps = 78/357 (21%)
Query: 56 EQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILN 115
E + ++ G ++P+ V L+ E G++ + E G +V+ G +V + NSN+++ L
Sbjct: 60 ENWYPAIQAIGFIEPVQGVTLTSEASGVISKIAFESGQRVKAGQELVSI-NSNVEVSSL- 117
Query: 116 AEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIARED 175
++ K QL + TY++ + L+ + +++
Sbjct: 118 --------------------------QSTKAQL----PAVEATYKRYQDLFRKGSVSKSS 147
Query: 176 FLQAKEDY-ELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNV 234
+AK +Y LV Q S+ SIQ RR+++
Sbjct: 148 LDEAKANYFALVSQI----------KSLEESIQ-----------RRDIV----------- 175
Query: 235 RSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFE--- 291
+ DGE+GL +V LGQ + PG +I ++ D + + + I ++K G
Sbjct: 176 -APFDGEVGLRNVYLGQYIQPGTQIVRLEDTRTMRFRFTVPQTDISKIKIGQTVDINVDA 234
Query: 292 RQGGNFELSVRKVYPEVRDG----KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESII 347
Q +F+ + + P V + + D +G + +RSG + L ++ II
Sbjct: 235 YQDTDFKGQITAIEPAVNAQTGLIQVQADIPNSGGK---LRSGMFARARVILPTISDQII 291
Query: 348 IPKGTFFQSTGGNWIFVLDK-DGK-KAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+P+ + G+ I+VL + DGK +A + + G+ + +L G++AGE++V +
Sbjct: 292 VPQTAITYTLYGDTIYVLKEVDGKLRAIQTVVTTGQNHGNKVRILSGIKAGEQIVTT 348
>gi|90581494|ref|ZP_01237288.1| membrane-fusion protein [Vibrio angustum S14]
gi|90437355|gb|EAS62552.1| membrane-fusion protein [Vibrio angustum S14]
Length = 367
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 78/357 (21%), Positives = 153/357 (42%), Gaps = 78/357 (21%)
Query: 56 EQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILN 115
E + ++ G ++P+ V L+ E G++ + E G +V+ G +V + NSN+++ L
Sbjct: 51 ENWYPAIQAIGFIEPVQGVTLTSEASGVISKIAFESGQRVKAGQELVSI-NSNVEVSSL- 108
Query: 116 AEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIARED 175
++ K QL + TY++ + L+ + +++
Sbjct: 109 --------------------------QSTKAQL----PAVEATYKRYQDLFRKGSVSKSS 138
Query: 176 FLQAKEDY-ELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNV 234
+AK +Y LV Q S+ SIQ RR+++
Sbjct: 139 LDEAKANYFALVSQI----------KSLEESIQ-----------RRDIV----------- 166
Query: 235 RSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFE--- 291
+ DGE+GL +V LGQ + PG +I ++ D + + + I ++K G
Sbjct: 167 -APFDGEVGLRNVYLGQYIQPGTQIVRLEDTRTMRFRFTVPQTDISKIKIGQTVDINVDA 225
Query: 292 RQGGNFELSVRKVYPEVRDG----KFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESII 347
Q +F+ + + P V + + D +G + +RSG + L ++ II
Sbjct: 226 YQDTDFKGQITAIEPAVNAQTGLIQVQADIPNSGGK---LRSGMFARARVILPTISDQII 282
Query: 348 IPKGTFFQSTGGNWIFVLDK-DGK-KAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+P+ + G+ I+VL + DGK +A + + G+ + +L G++AGE++V +
Sbjct: 283 VPQTAITYTLYGDTIYVLKEVDGKLRAIQTVVTTGQNHGNKVRILSGIKAGEQIVTT 339
>gi|150017335|ref|YP_001309589.1| efflux transporter, RND family, MFP subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149903800|gb|ABR34633.1| efflux transporter, RND family, MFP subunit [Clostridium
beijerinckii NCIMB 8052]
Length = 431
Score = 61.6 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 79/349 (22%), Positives = 151/349 (43%), Gaps = 31/349 (8%)
Query: 76 LSPEEGGIVQEKV--------VEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLL 127
L + GIV K+ VE G V GD I L + ++ I A+A++ + +
Sbjct: 66 LEAYQQGIVTSKIAAKVVAVSVENGQYVNAGDTIATLDDQDIQNNIKTAQAQVEVSEQQV 125
Query: 128 RNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQ 187
+TQ + ++ +KLQ+ +D QR Y +Q+ L+D I++ D A++ +
Sbjct: 126 NSTQQQLNSSQV--TLQKLQILMD--DAQRNYDRQKTLFDGGAISKTDLESAEKALNTSK 181
Query: 188 QKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDV 247
++ + + +S SI+ + +L + N+ + N +++ I G + +
Sbjct: 182 ADYSSGLASI--ESAKASIESSKA--SLEAQKVNLQKAQNDLANTVIKAPISGVISDKTL 237
Query: 248 VLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG------GNFEL-- 299
+GQ S G + ++ND+S + + I VK G AAT G G E
Sbjct: 238 NVGQMASQGAALAKVNDISSVYATIQVPQEKITGVKIGQAATITVDGNDKTYDGTIEAMD 297
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGG 359
S V + K + D G + ++ G + L + + I +P + G
Sbjct: 298 SAADATTRVFNCKVKID---NGNK--SLLPGIFGKVQLISEEKAQVITVPISALAGNEGD 352
Query: 360 NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYK 408
+F+ D A ++KI IG N EV +G++ G++V+ ++ + +
Sbjct: 353 YSVFL--NDNGTAKKQKITIGETNENNVEVTDGIKEGDQVICTNISTLQ 399
>gi|39934718|ref|NP_946994.1| membrane permeases, predicted cation efflux pumps [Rhodopseudomonas
palustris CGA009]
gi|39648568|emb|CAE27089.1| membrane permeases, predicted cation efflux pumps [Rhodopseudomonas
palustris CGA009]
Length = 420
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 70/343 (20%), Positives = 144/343 (41%), Gaps = 10/343 (2%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G ++ V+++ + G V++ +V+EG QV +G +V + S L ++ AE +A
Sbjct: 67 VVASGHIETPYRVEIASQITGTVKDVLVKEGEQVHQGQQLVAIEASELQASVVQAEGAVA 126
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ Q +R + E + Q ++ Q Y + KL + A +
Sbjct: 127 QAQARVRQLR---ELTKPAADEALKQAQANLLNAQAAYERASKLAASGYGTKATLDDATK 183
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
+ ++ + + ++ S S E L N+ + R + + DG
Sbjct: 184 NLDVARTQVRTAELQVFTTSPGGS-DFVMAETQLGQALANLNTAQARLGYATIVAPRDGV 242
Query: 242 LGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG---LAATFERQGGNFE 298
L +V G V PG+ + + D +I IDE + ++ G +A+ F+
Sbjct: 243 LITRNVERGTVVQPGKALLVLAPAGDIQIVVQIDEKNLGQLALGQHAMASADAYPDKRFD 302
Query: 299 LSVRKVYPEVRDGKFRTDFVF-TGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQST 357
++ + P V + + + PD +R T +++ + + +I+P +
Sbjct: 303 ATLSYINPSVDINRASVEIKLKVDDPPDYLRQDMTVSVDIATARRDDVVIVPARAVNDAA 362
Query: 358 GGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
+VL G +A R+ +++G + +YEV++GL G+RV+
Sbjct: 363 AAP--YVLKASGGRAVRQPVKLGLRGVGFYEVIDGLVPGDRVI 403
>gi|45441057|ref|NP_992596.1| putative HlyD family secretion protein [Yersinia pestis biovar
Microtus str. 91001]
gi|45435916|gb|AAS61473.1| putative HlyD family secretion protein [Yersinia pestis biovar
Microtus str. 91001]
Length = 342
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 79/361 (21%), Positives = 155/361 (42%), Gaps = 49/361 (13%)
Query: 53 VTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQ 112
V H V G++ + V + + G +++ VE G V+RG ++ + Q
Sbjct: 13 VVHRDLQQNVLATGKLDAVRKVDVGAQVSGQLEKLYVEIGDHVKRGQLLAMIDPQQAQNQ 72
Query: 113 ILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIA 172
I EA L Q+L +++Q ++ T +Q+ L ++++
Sbjct: 73 IKEVEATL---QDL---------------NAQRIQAKAELHLATVTLGRQQNLAKLQVVS 114
Query: 173 REDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENL 232
R+D QA D + K I Q+++ + +L + N+ +
Sbjct: 115 RQDLDQAVTDLAVKNAKVGTI-----------DAQINKAKASLDTAKINL-------DYT 156
Query: 233 NVRSQIDGELGLLDVVLGQNVSPGQK---IGQINDLSDYKIEALIDEHYIDRVKAGLAAT 289
+ + +DG++ + + GQ V Q+ I + D+S ++A + E + +K G+ A+
Sbjct: 157 QISAPMDGDVVQITTLQGQTVIAAQQAPNILTLADMSTMLVQAQVSEADVINLKPGMKAS 216
Query: 290 FE---RQGGNFELSVRKVYP---EVRDGKFRTDFVFTGERPDNI-RSGQTYYINLQLGQP 342
F G F ++ + P +V D F + F PD + R T +++QL
Sbjct: 217 FTVLGDPGKRFSGVLKDILPTPEKVNDAIFYSA-RFEVPNPDRLLRLQMTAQVSIQLANV 275
Query: 343 TESIIIPKGTFFQSTGGN-WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
++++IP G N + + K+GK+ +R++ IG +N +V+ GL GE V++
Sbjct: 276 DQAVVIPLAALGDELGSNRYQVTVLKEGKEE-KREVTIGIRNNVDAQVISGLSVGEDVIV 334
Query: 402 S 402
S
Sbjct: 335 S 335
>gi|149279612|ref|ZP_01885741.1| membrane fusion efflux protein, putative [Pedobacter sp. BAL39]
gi|149229648|gb|EDM35038.1| membrane fusion efflux protein, putative [Pedobacter sp. BAL39]
Length = 452
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 94/424 (22%), Positives = 172/424 (40%), Gaps = 90/424 (21%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
+++ + ++ + V G++QP T V+LS E G V E +V+EG V++G ++ ++
Sbjct: 34 VTVEKASDKKVTETVTASGKIQPETEVKLSSEVSGEVTELLVKEGDVVKKGQLLCKVRPD 93
Query: 108 NLDLQILNAEAEL-AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLY 166
L A A ++K + TQ+ LR Q + + + TY++ +L+
Sbjct: 94 VLKSGYDRAVASYSSQKAGVASATQI------LR------QNEANFVNAEATYKRNVELF 141
Query: 167 DEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIR 226
+K+I+ +F AK Y + A + +D I ++Q N+ N+
Sbjct: 142 GKKVISASEFDAAKAAYLTAKTNLA----KSKEDLISSKFMLEQSGANVQEANANLAKAT 197
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
V S++ ELG D +LG G +I +I++LS ++ ++E+ I+RV G
Sbjct: 198 IFAPVDGVISKLSVELG--DRILGTAQMAGTEIMRISNLSSMEVNVDVNENDINRVNVGD 255
Query: 287 AATFE------------------------------RQGGNFELSVRKV---YPEVRDGKF 313
+A E Q NF + VR + Y ++ G
Sbjct: 256 SAVIEVDAFADKKFKGIVTEIASSSKDIGTTTTSVDQVTNFVVKVRILADSYENIKGG-- 313
Query: 314 RTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFF------------------- 354
+ P R G + +++Q + + + IP F
Sbjct: 314 ------AKDLPSPFRPGLSATVDIQ-SESVKGLSIPIQAVFTGDKNKKEEDKDKPANDDN 366
Query: 355 ---QSTGGN------WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYE 405
Q T N ++FV + DG + ++ G Q+ Q+ V GL+AG+ VV Y
Sbjct: 367 QDKQKTKLNDKTVKQFVFVFNADG-TVKQVEVTTGIQDDQFIIVKTGLKAGQDVVTGPYS 425
Query: 406 SYKN 409
+ +N
Sbjct: 426 AIQN 429
>gi|120434570|ref|YP_860263.1| HlyD family secretion protein [Gramella forsetii KT0803]
gi|117576720|emb|CAL65189.1| HlyD family secretion protein [Gramella forsetii KT0803]
Length = 426
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 95/432 (21%), Positives = 176/432 (40%), Gaps = 102/432 (23%)
Query: 30 GWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVV 89
GW FGN A+ +V+ I +T + V G++QP V+LS E G + E +
Sbjct: 27 GW--FGNSANIKQVEITEIEPIDIT-----ETVSATGKIQPEIEVKLSSEVSGEIIELPI 79
Query: 90 EEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLD 149
EG V++GD++VR++ + A+A + TQ + Q
Sbjct: 80 VEGQAVKKGDLLVRVNPDIYQSSVQRAQASYQNSKANYSQTQANLRQ------------- 126
Query: 150 LDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQ-- 207
+ Y++ + L+++ +I++ ++ +YE+ + +++S Y S+Q
Sbjct: 127 -----AEADYQRNKTLFEKGVISKAEWDGIVSNYEMAEA---------NKESSYYSMQSS 172
Query: 208 ---MDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQIND 264
+ + +DNL R N+ S++D ELG + V+G G +I ++ +
Sbjct: 173 AATVTEAQDNLG--RTNIYAPMS-----GTISKLDAELG--ERVVGTQQMAGTEILRVAN 223
Query: 265 LSDYKIEALIDEHYIDRVKAGLAATFE--------------------------RQGGNFE 298
L + ++E ++E+ I +V + E Q NF+
Sbjct: 224 LDNMEVEVDVNENDIVKVSVNDSTLVEVDAYLGKEFKGVVTEISNTADNELTTDQVTNFK 283
Query: 299 LSVR---KVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINL-------QLGQPTESIII 348
+ VR + Y ++ +GK E R G T +++ +G P +I+I
Sbjct: 284 VKVRILKESYVDLMEGK--------SENYSPFRPGMTATVDIITNKRMDVIGIPISAIVI 335
Query: 349 P------KGTFFQSTGG----NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGER 398
K ++ G + V KDG KA R + G Q+ + E+ GL+ G+
Sbjct: 336 KSDTTATKKSYGTKPSGEEDEKFECVFVKDGGKAKLRVVNTGVQDDSHIEITSGLKKGDI 395
Query: 399 VVISSYESYKNS 410
VV Y + S
Sbjct: 396 VVTGPYSTVTKS 407
>gi|77979259|ref|ZP_00834679.1| COG0845: Membrane-fusion protein [Yersinia intermedia ATCC 29909]
Length = 370
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 82/391 (20%), Positives = 170/391 (43%), Gaps = 52/391 (13%)
Query: 23 IAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGG 82
IA L++ G+ + + + V + + + + +Q V G++ + V + + G
Sbjct: 14 IAVLIMGGFFLIRHLTAPAPVQYQTVKVANRDLQQN---VLATGKLDAVRKVDVGAQVSG 70
Query: 83 IVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNK 142
+++ VE G QV++G ++ + QI EA L + L + M+ +
Sbjct: 71 QLEKLYVEIGDQVKQGQLLAMIDPQQAQNQIKEVEATLQDLNAQLAQAKAEMQLAAV--- 127
Query: 143 TEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSI 202
T R+Q+ L ++++R+D QA +L +++ ++I
Sbjct: 128 ---------------TLRRQQDLAKLQVVSRQDLDQAST---------SLAVKKAQVETI 163
Query: 203 YRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQK---I 259
I + + AN+ + + + +DG++ + + GQ V Q+ I
Sbjct: 164 NAQINKTKASLDTANINLDYT---------KISAPMDGDVVQITTLQGQTVIAAQQAPNI 214
Query: 260 GQINDLSDYKIEALIDEHYIDRVKAGLAATFE---RQGGNFELSVRKVYP---EVRDGKF 313
+ D+S + A + E + +K G+ A+F G +F+ ++ + P +V D F
Sbjct: 215 LTLADMSTMLVNAQVSEADVIHLKPGMKASFTVLGDPGKHFDGVLKDIQPTPEKVNDAIF 274
Query: 314 RTDFVFTGERPDNI-RSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN-WIFVLDKDGKK 371
+ F PD + R T +++QL ++++IP G N + + KDGK+
Sbjct: 275 YSA-RFEVPNPDRLLRLQMTAQVSIQLANVKQAMVIPLSALGDELGTNRYQVAVLKDGKE 333
Query: 372 AYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+R++ IG +N +V+ GL G+ V++S
Sbjct: 334 E-KREVTIGIRNNVDAQVISGLNVGDEVIVS 363
>gi|77974822|ref|ZP_00830360.1| COG0845: Membrane-fusion protein [Yersinia frederiksenii ATCC
33641]
Length = 370
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 89/392 (22%), Positives = 171/392 (43%), Gaps = 52/392 (13%)
Query: 22 GIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEG 81
IA L++ G+ I + + V + + + H +Q V G++ + V + +
Sbjct: 13 AIAVLVIGGFFIIRHLMAPAPVQFQTVKVAHRDLQQN---VLATGKLDAVRKVDVGAQVS 69
Query: 82 GIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRN 141
G +++ VE G QV++G ++ + QI EA L + L Q EQ
Sbjct: 70 GQLEKLYVEIGDQVKQGQLLAMIDPQQAQNQIKEVEATLQDLNAQL--VQAKAEQ----- 122
Query: 142 KTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDS 201
QL + T R+Q++L + ++R+D QA L +++ ++
Sbjct: 123 -----QL------AEVTLRRQQELAKLQAVSRQDLDQAST---------TLAVKKAQVET 162
Query: 202 IYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQK--- 258
I I + + AN+ + + + +DG++ + + GQ V Q+
Sbjct: 163 INAQINKTKASLDTANINLDYT---------KISAPMDGDVVQITTLQGQTVIAAQQAPN 213
Query: 259 IGQINDLSDYKIEALIDEHYIDRVKAGLAATFE---RQGGNFELSVRKVYP---EVRDGK 312
I + D+S + A + E + +K G+ A+F G +F+ ++ + P +V D
Sbjct: 214 ILTLADMSTMLVNAQVSEADVIHLKPGMKASFTVLGDPGKHFDGVLKDIQPTPEKVNDAI 273
Query: 313 FRTDFVFTGERPDNI-RSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN-WIFVLDKDGK 370
F + F PD + R T +++QL ++++IP G N + + K+GK
Sbjct: 274 FYSA-RFEVPNPDRLLRLQMTAQVSIQLANVPQAMVIPLSALGDELGINRYQVAVLKEGK 332
Query: 371 KAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+ +R++ IG +N +VL GL GE V++S
Sbjct: 333 EE-KREVTIGIRNNVDVQVLSGLNVGEEVIVS 363
>gi|116626959|ref|YP_829115.1| secretion protein HlyD family protein [Solibacter usitatus
Ellin6076]
gi|116230121|gb|ABJ88830.1| secretion protein HlyD family protein [Solibacter usitatus
Ellin6076]
Length = 475
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 12/248 (4%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
+ G+V + V G+V+P + + G ++E +V+EG +VRRG ++ R+ N
Sbjct: 35 VQTGNVVRQDLTSLVTASGEVKPKNYINIGANAQGELKEILVKEGDRVRRGQLLARIENV 94
Query: 108 NLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRT---YRQQEK 164
+ + A L + + ++ +T + Q+D D + T + + E
Sbjct: 95 QPEADVDAQRATLNSAEADSAAAEAGLKAADENLRTLQAQIDKDKADLEHTKADFDRSES 154
Query: 165 LYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQM---EDNLANMRRN 221
LY E L+A++D+ K +E + RL Q R + Q+ + +A +
Sbjct: 155 LYKEHLLAKQDWELKKFTFEAQRATVTQSEMRLVQARAQREQSLAQLASAQKRIAQYKAV 214
Query: 222 VLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPG------QKIGQINDLSDYKIEALID 275
++ + + N + +DG + L V +G+ V PG I I D+S E +D
Sbjct: 215 LVRFNDILQKHNAFAPLDGVVTNLPVRVGETVVPGVQNSAASTIMTIADMSLITAEVKVD 274
Query: 276 EHYIDRVK 283
E I VK
Sbjct: 275 ETDIVNVK 282
>gi|68552102|ref|ZP_00591494.1| Secretion protein HlyD [Prosthecochloris aestuarii DSM 271]
gi|68240917|gb|EAN23186.1| Secretion protein HlyD [Prosthecochloris aestuarii DSM 271]
Length = 419
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 46/257 (17%)
Query: 34 FGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGA 93
N + V + I V H +V G+++P V LSP+ G + E V EG
Sbjct: 32 LANKERVIEVSTEKVFIKEVIH-----YVTATGKIEPEIEVNLSPDVSGEITELPVSEGE 86
Query: 94 QVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDIT 153
V +G ++ ++ Q+ A L NL R+ RL + KL+ D D
Sbjct: 87 HVEKGTLLFKIQPDVYVNQVEQNRARL----NLARS-------QRLEARARKLKSDDD-- 133
Query: 154 RRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMED 213
+R+ LY+EKLI++ D+L AK + E H I ++Q+ ++Q+
Sbjct: 134 -----FRKASMLYNEKLISQSDYLTAKTNAEAAAAIHDASISTINQNQSLLDQSLEQLNK 188
Query: 214 NLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVS-----PGQKIGQINDLSDY 268
+ V+S I+G + L+ LG+ V PG ++ +I +L
Sbjct: 189 TV------------------VKSPIEGVIIALNSKLGERVVGTGQFPGTEVLRIANLDSM 230
Query: 269 KIEALIDEHYIDRVKAG 285
++E ++E+ I V G
Sbjct: 231 QVEVEVNENDIVNVNKG 247
>gi|78484587|ref|YP_390512.1| Secretion protein HlyD [Thiomicrospira crunogena XCL-2]
gi|78362873|gb|ABB40838.1| RND membrane fusion protein [Thiomicrospira crunogena XCL-2]
Length = 414
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 136/311 (43%), Gaps = 24/311 (7%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQN 125
G+V+ +V +S G+V E V+ G +G +V L++S+L+L A+A++A+ Q
Sbjct: 67 GKVESFRLVDVSSPVAGVVSELPVKAGDNFEKGMKLVALADSDLELPFQIAKADVADTQA 126
Query: 126 LLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYEL 185
L ++ + ++ R + EK L L ++R + +L + L ++ Q+KE L
Sbjct: 127 QLNLEKLAYDANQKRLEFEKKVLAL----KERDVERNTQLLKKDLASKSVLDQSKE--AL 180
Query: 186 VQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLL 245
V+Q++ ++ +L +++ Q++ L + N + E V + DG + +
Sbjct: 181 VRQQYVVVGAKLSVQE--HKVKVSQLQARLQKSQANFEQAKINLERGRVIAPYDGRIAQV 238
Query: 246 DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG------LAATFERQGGNFEL 299
V G V+ G K+ L ++ A I + V G L A E FEL
Sbjct: 239 SVAQGNRVNVGAKLLSYYALDSLELRAKIPTQQLKTVYEGMQSGDTLYAQLEMNNQQFEL 298
Query: 300 SVRKVYPEVRDGKFRTDFVFTGERPDN---IRSGQTYYINLQLGQPTESIIIPKGTFFQS 356
++++ E F PD +R G+ ++ + T +P +
Sbjct: 299 PLKRLAGEAETSGVDAFFAL----PDALKILRPGELLQVDFYGERLTNVFAVPYSALY-- 352
Query: 357 TGGNWIFVLDK 367
G + I+V++K
Sbjct: 353 -GADRIYVVEK 362
>gi|86750991|ref|YP_487487.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
gi|86574019|gb|ABD08576.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
Length = 424
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 71/347 (20%), Positives = 139/347 (40%), Gaps = 18/347 (5%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G ++ V++ + G V + +V EG VR G ++ + S L+ ++ AE +
Sbjct: 71 VVASGHIETPYRVEIGSQITGTVADVLVREGEVVREGQKLIAIEASELEAAVVQAEGAVQ 130
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ + +R + E + Q ++ + Y + KL R A
Sbjct: 131 QAEARVRQLR---ELTKPAADQSLQQAQANLLNAEAAYERASKLAAGGFGTRATLDDATR 187
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQ----MEDNLANMRRNVLLIRERKENLNVRSQ 237
+ + + + R + +Y S + E LA R + + R ++ +
Sbjct: 188 NLNVARTQ-----VRTAELQVYTSSPVGSDFVMAETQLAQARATLNTTQARLGYASITAP 242
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG---LAATFERQG 294
DG L V G V PG+ + + D +I IDE + ++ G LA+
Sbjct: 243 RDGVLITRKVERGSVVQPGKALLVLAPAGDSQIVVQIDEKNLGQLALGQHALASADAYPD 302
Query: 295 GNFELSVRKVYPEVRDGKFRTDFVFTG-ERPDNIRSGQTYYINLQLGQPTESIIIPKGTF 353
F + + P V + + + PD +R T +++ + ++++P
Sbjct: 303 KRFAARLSYINPSVDINRASVEIKLAVIDPPDYLRQDMTVSVDIATARRDNAVVVPARAV 362
Query: 354 FQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
+T +VL G +A R+ +++G + YEV+EGL G+RV+
Sbjct: 363 NDAT--TVPYVLKVAGGRAVRQPVKLGLRGVGAYEVIEGLSPGDRVI 407
>gi|89211814|ref|ZP_01190152.1| Secretion protein HlyD [Halothermothrix orenii H 168]
gi|89158583|gb|EAR78293.1| Secretion protein HlyD [Halothermothrix orenii H 168]
Length = 481
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 97/421 (23%), Positives = 177/421 (42%), Gaps = 77/421 (18%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS----NLDLQILNA- 116
V DG V + + G+V+ +EEG +V G+ I+++ NL+L L+
Sbjct: 52 VLADGNVTFENDRDIKVKVSGLVERVYIEEGDEVAEGEKIIKIDGDPLRDNLELARLSLK 111
Query: 117 --------------------EAELAE-KQNL-LRNTQVTMEQDRLRNKTEKLQLDLDITR 154
E +L E +QNL L + E++ L K + LQ +D +
Sbjct: 112 EASKNYETLVSNFKKQDKINELKLKEARQNLELARLSLNKEKESLEYKLKTLQDKIDDAK 171
Query: 155 R-----QRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERL---HQDSIYRSI 206
+ ++ + +Q+ L+ K +A + A++ Y+ Q + + E L Q +I R+I
Sbjct: 172 KALDEARKEWEKQKYLFQNKAVAEKAVKNAEKAYQTAQDNYEDLKEELKYLEQKTIPRTI 231
Query: 207 QMDQMEDNLAN-----------------------------MRRNVLLIRERKENLNVRSQ 237
++ +E A ++N+ I+E L +
Sbjct: 232 ELANLEVGKAENSLELLKNSLEKSNITENDLELARIKIDRAKKNIADIKEDLNRLETLAP 291
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAAT-----FER 292
I G + L++ G V G +G+I DL IE ++DE ++ V G + T FE
Sbjct: 292 ITGTIVSLEIREGDKVVEGTTVGKIADLESLLIEVMVDEVDVNEVAVGQSVTLTSDSFED 351
Query: 293 QGGNFELSVRKVYPEVRD-GKFRTDFVFTGERPDNI-RSGQTYYINLQLGQPTESIIIPK 350
+ + + V +V + K+RT V + P+ + + G + I +P
Sbjct: 352 KLTGEVIKIDPVATKVGNLNKYRTQIVVSD--PEGVLKPGMFVNAEIVTSYKNNVITLPP 409
Query: 351 GTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNS 410
+++V++ DG KA +R + +G QN EV +G++AGERV+I + K+
Sbjct: 410 LAVLGDE-DKYVYVVE-DG-KAVKRPVELGLQNLTKVEV-KGVKAGERVIIGPFTVLKDL 465
Query: 411 E 411
E
Sbjct: 466 E 466
>gi|121533620|ref|ZP_01665447.1| efflux transporter, RND family, MFP subunit [Thermosinus
carboxydivorans Nor1]
gi|121307611|gb|EAX48526.1| efflux transporter, RND family, MFP subunit [Thermosinus
carboxydivorans Nor1]
Length = 376
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 96/397 (24%), Positives = 159/397 (40%), Gaps = 51/397 (12%)
Query: 19 IVGGIAFLLLVGWMIFG--------NHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQP 70
+V G+ L+LVG +FG A R + + + V E DF G V+
Sbjct: 7 MVTGLIVLVLVG--LFGAGCGKIKPGTAEVRRPEVAQVVVSPVREEAVEDFYETAGTVRA 64
Query: 71 ITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNT 130
++ + G V +G VR G ++V ++ D A A Q ++
Sbjct: 65 RATGSIASKVTGTVVTVHFRQGEPVRAGQLLVTIA---ADEMAKKVAAAEAAYQEAVKAQ 121
Query: 131 QVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKH 190
+ E RL DIT YR+ +L + I+R+DF D Q+K
Sbjct: 122 AASAENRRLA----------DIT-----YRRYAQLVQDGAISRQDF-----DRVAAQKKV 161
Query: 191 ALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLG 250
A D Y Q + A V R V + DG V G
Sbjct: 162 A--------DFDYERAQAAAVRAAAALEEAKVYQGFTR-----VTAPFDGIAREKKVEEG 208
Query: 251 QNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLA--ATFERQGGNFELSVRKVYPEV 308
V PG ++ I D ++++++A +DE Y V G+ T G + +V++V P V
Sbjct: 209 STVVPGTQLAVIEDAAEFEVDAGVDERYASFVHPGMKVFVTVPAAGRQLDGTVKEVVPAV 268
Query: 309 RDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKD 368
D K R V + ++SG + L +G ++ ++P+ + ++V+ D
Sbjct: 269 -DVKSRNFLVRVSVPGEGLKSGLYAKVRLAVGD-RKTYLVPRTAVVEKGQLTGVYVVGND 326
Query: 369 GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYE 405
YR ++ G+ Q E+L GL AG++VV+S +
Sbjct: 327 NVIRYRL-VKTGKDYGQQVEILTGLAAGDQVVVSDVD 362
>gi|77917886|ref|YP_355701.1| putative MacA-like membrane transport protein [Pelobacter
carbinolicus DSM 2380]
gi|77543969|gb|ABA87531.1| putative MacA-like membrane transport protein [Pelobacter
carbinolicus DSM 2380]
Length = 417
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 81/362 (22%), Positives = 154/362 (42%), Gaps = 49/362 (13%)
Query: 67 QVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL----AE 122
+ Q +V++ G +++ +V+ G +V RG ++ R+ N + Q+ A A L AE
Sbjct: 59 KTQVGAIVKIGTRATGTIEKMLVQVGDRVSRGQLVARIDNREIRAQVAEARAGLRTDEAE 118
Query: 123 KQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQ-----RTYRQQEKLYDEKLIAREDFL 177
Q + R + +E+ Q +L +TR Q Y++ +L E ++++++
Sbjct: 119 LQRVRRIEPLNIEE---------AQAELALTRAQAEYLRSNYQRIRQLAAEGIVSQDELE 169
Query: 178 QAKEDYELVQQKHA---LIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNV 234
A++ E+ ++ A +ERL Q + E+NL + V R + + L V
Sbjct: 170 NAQQQAEVETRREAARQTALERLQQ----------EYEENLRQAQLAVQSSRAKLDALQV 219
Query: 235 R-------SQIDGELGLLDVVLGQNVSPGQKIGQ---INDLSDYKIEALIDEHYIDRVKA 284
R S IDG + + G+ + G ++ + D S ++ +DE I +V
Sbjct: 220 RLSYTDIHSPIDGIVSQVTAQEGETIVAGLQVANLITVLDTSRLEMWIYVDETDIGQVSP 279
Query: 285 GLAATFERQGGN---FELSVRKVYPE--VRDGKFRTDFVFTGERPDN--IRSGQTYYINL 337
G F F +++ VYPE +RD + +P+ +R T + +
Sbjct: 280 GQQVEFRVDAYTDKVFPGTIQTVYPEPEIRDNIVYYKALVAIPKPEAAWLRPEMTTQVQI 339
Query: 338 QLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGE 397
+ + + +P G +F+L DGK +G E+L+GL+ G+
Sbjct: 340 VVAEKDAVLRLPNAALKWVDGRQVVFLLPPDGK-VREVHPELGLTGLLESEILQGLQEGD 398
Query: 398 RV 399
RV
Sbjct: 399 RV 400
>gi|83815478|ref|YP_446939.1| membrane fusion efflux protein, putative [Salinibacter ruber DSM
13855]
gi|83756872|gb|ABC44985.1| membrane fusion efflux protein, putative [Salinibacter ruber DSM
13855]
Length = 465
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 48/268 (17%)
Query: 29 VGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKV 88
+GW FG L+V++ + V G+ QP V++SP+ G + E
Sbjct: 43 LGW--FGGGERGLQVESE-----RAERRTITEVVTAFGRAQPEVEVEISPDVSGEIVELP 95
Query: 89 VEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQL 148
V+EG V++GD++ RL + + AEA ++E + T+ Q R
Sbjct: 96 VKEGDVVQQGDLLARLKADDYRAAVERAEAGVSE-------AKATLAQRR---------- 138
Query: 149 DLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQM 208
D + +RTY +Q+KLY++++++ DF AK YE Q L R +S
Sbjct: 139 -ADSVQARRTYDRQKKLYEKEVVSASDFEDAKSTYE--QAVAQLQAARFRVES------- 188
Query: 209 DQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDV-----VLGQNVSPGQKIGQIN 263
R ++ RE+ + + + + G L L+V V+G G ++ +++
Sbjct: 189 ---------ARADLQDAREQLQKTRIYAPMSGTLTRLEVEEGERVVGTQQRAGTEMMRVS 239
Query: 264 DLSDYKIEALIDEHYIDRVKAGLAATFE 291
L ++E ++E + V + +AT E
Sbjct: 240 RLGQMELEVDVNESDVVNVASRDSATIE 267
>gi|148241814|ref|YP_001226971.1| Membrane-fusion protein [Synechococcus sp. RCC307]
gi|147850124|emb|CAK27618.1| Membrane-fusion protein [Synechococcus sp. RCC307]
Length = 399
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 88/411 (21%), Positives = 159/411 (38%), Gaps = 57/411 (13%)
Query: 3 IQLEKKKGIRKKHL---PYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHE--Q 57
+ ++ K R +HL + G+A L+ V ++ +S R IS T E Q
Sbjct: 22 VVMDPLKRSRLRHLNRRQWAAAGLAVLIAVSGLVIWRRSSA---PGRDISAYTTTVETGQ 78
Query: 58 FNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAE 117
+ + G++ V LSP++ G ++E +V+EG VR+G I R+ ++D +I
Sbjct: 79 LDGVITASGEIAAQRQVNLSPKQAGQLEELLVQEGDAVRKGQAIARMDPDDIDNKI---- 134
Query: 118 AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
AE Q L + +V M + RL + ++E L+ + ++FL
Sbjct: 135 ---AETQAGLDSARVNMSRARLE------------------FERRESLHAAGALTTDEFL 173
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
K YE + + +RL Q +++D R LLI+ +
Sbjct: 174 SFKAKYETARAELNAAEQRLEQ----------KLQD------RRDLLIKAPFAGVITNRF 217
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG--- 294
D + + + S +++A + E I R+K G A
Sbjct: 218 ADPGSYVTPTTAASASAGASSASIVQLASGLQVKAKVPESDIGRIKVGQRAKIRVDAYPE 277
Query: 295 GNFELSVRKVYPEVRDGKFRTDFVFTGERPDN----IRSGQTYYINLQLGQPTESIIIPK 350
+F V + P T F E D +R G T ++ G+ ++P
Sbjct: 278 RSFTARVSAISPRAEKNNDVTTFEVKLELQDPPAGLLRIGMTTDVDFDSGKLAAEPLVPT 337
Query: 351 GTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
G + + G + +++ +G + + +VL+GLE GE+V I
Sbjct: 338 VAIVTEEGKPGVLI-PGAGNEPKFQEVTLGNSSGRQTQVLKGLEPGEKVFI 387
>gi|86159831|ref|YP_466616.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776342|gb|ABC83179.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
Length = 443
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 34/358 (9%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G+V +Q+ G V V+EG VR GD++VRL ++ A A L+
Sbjct: 81 VVASGRVMAPARIQVGAVATGKVAAVRVDEGDAVRAGDLLVRLDDA-------EARAALS 133
Query: 122 EKQNLLRNTQVTMEQDR---LRNKTEKL-QLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
+ + + +EQ R R TE L Q +L + +R + L D
Sbjct: 134 QARAQVLQAAARLEQSRGPAARGATEALRQAELRVELAERARERARSLADAG-------- 185
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQM------DQ--MEDNLANMRRNVLLIRERK 229
+ +L + AL + R ++S DQ E LA R + R R
Sbjct: 186 -SASVAQLDDAEQALALARSARESALAQAAAAAGAGPDQRLAEAALAAARGAEEVARARL 244
Query: 230 ENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAAT 289
E+ +R+ + L +V G V+ G ++ + + ++ DE + ++ G A
Sbjct: 245 EDRQLRAPAAATVILREVEPGDTVTAGARLLVLARAGETRLSVEPDEKNLALLRVGQPAR 304
Query: 290 FERQG---GNFELSVRKVYPEVRDGKFRTDF-VFTGERPDNIRSGQTYYINLQLGQPTES 345
FE +V + P V + + + P +R T +N+++G+ ++
Sbjct: 305 AVADAFPDAPFEATVSFLAPSVDPARGTVEVRLAVPAPPPFLRPDMTVSVNVEVGRKADA 364
Query: 346 IIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISS 403
+++P + G W VL G +A RR +R+G + E+ GL AG+ V+ S
Sbjct: 365 LVVPADAVRDAGGSPW--VLAVRGGRAERRAVRLGLRGDGLVEIAGGLAAGDEVLAPS 420
>gi|71277837|ref|YP_271064.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
gi|71143577|gb|AAZ24050.1| efflux transporter, RND family, MFP subunit [Colwellia
psychrerythraea 34H]
Length = 412
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 82/416 (19%), Positives = 169/416 (40%), Gaps = 6/416 (1%)
Query: 1 MDIQLEKKKGIRKKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFND 60
M I L KK+ +K I L G+ + G +T V + +S V +
Sbjct: 1 MKIALTKKQPWKK--WVAIASFTLVLSYAGYSVSGK--ATKSVQLKDLSFQTVVQGDLDI 56
Query: 61 FVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAEL 120
+ G+ L+ G V E +V G +V II+ LSN L ++ A +L
Sbjct: 57 YANAYGEFASAKERLLTAPALGKVSEILVRPGTKVTPDTIILHLSNPKLVQEVNAANGQL 116
Query: 121 AEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
A++ + + +RL + ++ +I + + L D + ++ + +AK
Sbjct: 117 AQQLAQREAFKYEQQSERLNYQGRIADIEAEIEKAELELSVNMNLMDLGVSSKIELQRAK 176
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
+ ++ ++ Q +S Q+ Q + + V L+ ++ +++ V++ I+G
Sbjct: 177 LAVKQENKRLGFEKKKYKQFIEMQSHQLTQRDITIKQQHAQVNLLEQQLDDMKVKAGING 236
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELS 300
L L+V LGQ+V GQ + ++ + ++ D++ + Q G +
Sbjct: 237 SLQTLEVELGQSVQLGQSLAKVGSDEVLIARLRLPQNQADQIDINALVLIDTQKGIIKGH 296
Query: 301 VRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
+ ++ V +G + V + N R + + + E I + F+
Sbjct: 297 ITRIESVVNNGSVLAEAVIDEDLTSNARPALSISAQVFVRHQQEISYIEQVPGFRPRSKQ 356
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESY-KNSEILIL 415
+FV D + +R + G + + GL+ GE++V S + Y K ++LI+
Sbjct: 357 SLFVRDTN-DSLVQRDVTFGELSKNKLVITSGLKPGEQLVSSDTQKYTKYPQLLII 411
>gi|106893515|ref|ZP_01360640.1| Secretion protein HlyD [Clostridium sp. OhILAs]
gi|106775251|gb|EAT31810.1| Secretion protein HlyD [Clostridium sp. OhILAs]
Length = 412
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 73/333 (21%), Positives = 147/333 (44%), Gaps = 25/333 (7%)
Query: 84 VQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKT 143
+++ V+EG V++GD++ L +SN I A+A + + T + +L T
Sbjct: 73 IKKLYVKEGDFVKKGDVLFVLDDSNNAASIDQAKAGVEIAKINYEKMGTTAKDQQLEQVT 132
Query: 144 EKLQ-LDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDY-------ELVQQKHALIIE 195
++ L + + ++L+D I+ + QA++ Y E Q+ +A+ +
Sbjct: 133 NAIESAKLGFKEAKTNLDRMKELFDTGGISAQSLEQAQKAYDGAKLQLESAQRNYAIAEK 192
Query: 196 RLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSP 255
+ Q+ + Q+ Q E +LA R+ V ENL V ++I+GE+ + V + ++
Sbjct: 193 TVEQNILTAKEQLHQAEASLAAARKQV-------ENLEVTAEINGEVSEIYVEEDKTLAA 245
Query: 256 GQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRDGKFRT 315
G KI I + D +++ +DE ++ + G T + V + +V
Sbjct: 246 GTKIMDIVNYDDLEVKIKVDEFDLNAITEGKEVTVTIN--PLDKDVTGIVSKVSKQALNV 303
Query: 316 DFV--FTG----ERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDG 369
+ V FT E+ ++R G + + + Q + Q N FV +D
Sbjct: 304 NGVSFFTASIDLEKDKDLRVGLSAEVK-AMNQNSNKATTISMKALQFDQSNQPFVYYRDA 362
Query: 370 -KKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
K +++ +G + E+L+G+++GE V+I
Sbjct: 363 NNKVVTKQVSVGINDGNIVEILDGIKSGEVVLI 395
>gi|34498160|ref|NP_902375.1| probable membrane protein [Chromobacterium violaceum ATCC 12472]
gi|34104015|gb|AAQ60375.1| probable membrane protein [Chromobacterium violaceum ATCC 12472]
Length = 411
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 84/359 (23%), Positives = 149/359 (41%), Gaps = 48/359 (13%)
Query: 53 VTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQ 112
V + D V G +Q + V + + G ++ VE G +V++G ++ + +
Sbjct: 72 VERGELEDLVLASGMIQALRQVDVGAQTNGQLKSLKVEAGDKVKQGQLLAEIDPEDSLNA 131
Query: 113 ILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIA 172
+ AEA L R Q +Q LR ++L +Q +++ E +
Sbjct: 132 LRAAEASLDA-----RIAQRQAKQASLRQAEQELA-------------RQRRMHAEGSTS 173
Query: 173 REDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENL 232
+D L A Y ++ A + ++ QD R + LL R
Sbjct: 174 DKDLLAADTSYRTLKAGLAELQAQIRQDESQRD-------------SKRTLLGYTR---- 216
Query: 233 NVRSQIDGELGLLDVVLGQNVSPGQK---IGQINDLSDYKIEALIDEHYIDRVKAGLAAT 289
+ + +DGE+ + GQ V Q I ++ DLS + A + E + R++AGL
Sbjct: 217 -ILAPMDGEVLEIVTQQGQTVIATQTAPVILKLADLSKVTVRADVAEADVIRIQAGLPVY 275
Query: 290 FERQGG---NFELSVRKV--YPEVRDGKFRTDFVFTGERPD-NIRSGQTYYINLQLGQPT 343
F G + +R + PE + +F PD +R T +++ L +
Sbjct: 276 FTVLGAPDKRYWGKLRAILPMPEKINNAMFYKALFDVPNPDGKLRVNMTTQVSIVLSRVD 335
Query: 344 ESIIIPKGTFFQS--TGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
+++ IP + G + + V KDG+ RR +RIG + +VL+GL+AGE+VV
Sbjct: 336 KALSIPLSALGAAGKDGRHAVKVKGKDGRLQERR-VRIGLKTSTRVQVLDGLKAGEQVV 393
>gi|149927995|ref|ZP_01916244.1| secretion protein HlyD [Limnobacter sp. MED105]
gi|149823291|gb|EDM82525.1| secretion protein HlyD [Limnobacter sp. MED105]
Length = 369
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 5/178 (2%)
Query: 228 RKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLA 287
R N V + DG + LG +PGQ++ ++ + +A + + + R+ G+A
Sbjct: 179 RLRNTTVTALDDGVISARTATLGSVPAPGQELFRLVRQQRLEWQAEVTDAELARISEGMA 238
Query: 288 ATFERQGGNFELSVRKVYPEVRDGKFRTDFVFT---GERPDNIRSGQTYYINLQLGQPTE 344
VR + P V + + RT V+ G ++ G LG T
Sbjct: 239 VNVFNNDQALSGKVRTLSP-VINAQSRTGMVYVDIPGAYAKGLKPGMYLRGEFDLGAQTA 297
Query: 345 SIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
++I P+ + G + F LD+ K R K+R+ + ++ EVLEGL G++VV S
Sbjct: 298 TVI-PQTAVIERDGFTYAFTLDQASSKVQRIKLRVNKAQGEFIEVLEGLSPGDKVVKS 354
>gi|156111128|gb|EDO12873.1| hypothetical protein BACOVA_01377 [Bacteroides ovatus ATCC 8483]
Length = 344
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 52 HVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDL 111
H+ + ++ D +V + PI G +++ +E QVR+GD ++ + ++ L
Sbjct: 32 HLGNIEYTDNAQVKQHITPINT-----RVPGFIKKIYFDEYQQVRKGDTLLIIEDAEFRL 86
Query: 112 QILNAEAELAE--------------KQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQR 157
++ AEA+LA QN L + ++E+ R++ + K +L+
Sbjct: 87 RVAQAEADLANATAGRQATTIGIATTQNNLSVSDASIEEVRVQMENAKRELN-------- 138
Query: 158 TYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLAN 217
+ EKL E + ++ + YE + ++ + S+ +S Q ++ N A
Sbjct: 139 ---RFEKLLQEDAVTKQQYDNVHTAYEAAKARYEQVSRAKMSTSLVKSEQTHRLGQNEAG 195
Query: 218 MRRNVLLIRERKENLN---VRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALI 274
+R + + NL+ + + DG G +++ GQ V PGQ I I D SD + A
Sbjct: 196 VRLAEAALELARLNLSYTVIIAPCDGTTGKKEILEGQLVQPGQTIVDIVDSSDLWVIANY 255
Query: 275 DEHYIDRVKAG 285
E + +K G
Sbjct: 256 RETQLPNIKEG 266
>gi|67919446|ref|ZP_00513023.1| Secretion protein HlyD [Chlorobium limicola DSM 245]
gi|67782918|gb|EAM42320.1| Secretion protein HlyD [Chlorobium limicola DSM 245]
Length = 415
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 41/229 (17%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G+++P T V +SP+ G + E V++G QVR+GD++ ++ D+ I E +A
Sbjct: 54 VTATGKIEPETEVAMSPDVSGEIIELPVKDGQQVRKGDLLFKIQP---DVYINQVEQSMA 110
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ NL + L K+ K++ + D +R+ L+ EKLI++ DFL AK
Sbjct: 111 Q-LNLAK-------AQSLEAKSRKIKAEDD-------FRKASLLFREKLISQTDFLAAKT 155
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
+ + + Q YRS+ DQ +D MR+ V +R+ IDG
Sbjct: 156 NADAASASFEASTYAIEQ---YRSL-YDQNQD---RMRKTV-----------IRAPIDGT 197
Query: 242 LGLLDVVLGQNVS-----PGQKIGQINDLSDYKIEALIDEHYIDRVKAG 285
+ L+ G+ V PG ++ + +L ++E ++E+ I V+ G
Sbjct: 198 IIKLNSKTGERVVGTGQFPGTEVLGLANLDSMQVEVEVNENDIVNVRKG 246
>gi|148256510|ref|YP_001241095.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
gi|146408683|gb|ABQ37189.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 411
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 76/363 (20%), Positives = 149/363 (41%), Gaps = 31/363 (8%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQ- 124
G V P V ++ G + EK V G V D+++ ++ D+Q EA A +
Sbjct: 52 GTVAPARSVAVTAPYDGSIAEKKVALGDTVAERDVLIVMNAE--DIQSRGREARSATLKA 109
Query: 125 ----NLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
+ L + + E R R E + L R +R +LYD +++R +F A+
Sbjct: 110 AIALDALTHWEAGPEVTRARRGVEAARTVL--ARLERKVNDTRQLYDRGIVSRVEFEAAE 167
Query: 181 EDYE-------LVQQKHALIIERLHQDSI-YRSIQMDQMEDNLANMRRNV--LLIRERKE 230
++ + +Q + R DS ++++ + LA+++R ++R
Sbjct: 168 QERDNQAFTVATAEQDLTATLARGGADSRRLAELELENAKARLADVQRQADGTIVRAPVA 227
Query: 231 NLNVRSQIDGELGLL--DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAA 288
+ V+ G + V G V GQ + + DLS ++ +DE +++++ G +
Sbjct: 228 GVIVKPPTVNASGAVPQTVETGARVQRGQTLFSVADLSSLIVDGKVDEIDVNQIRIGQSV 287
Query: 289 TFERQ---GGNFELSVRKVYPEV------RDGKFRTDFVFTGERPDNIRSGQTYYINLQL 339
G V V E + F + + D+IR G + + ++L
Sbjct: 288 AISSDAFPGLPLRGHVVGVSSEATQDSANQTAMFNVRVLIDDTKKDDIRIGMSARMTIEL 347
Query: 340 GQPTESIIIPKGTFFQS-TGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGER 398
++ +P G + +G + ++D +A R +R+G P ++L GLE G+
Sbjct: 348 DARPGALFVPIGAVRRGPSGATTVKLIDSTSGQAQERSVRLGVTTPTSVQILSGLEDGDV 407
Query: 399 VVI 401
V +
Sbjct: 408 VAV 410
>gi|146306950|ref|YP_001187415.1| efflux transporter, RND family, MFP subunit [Pseudomonas mendocina
ymp]
gi|145575151|gb|ABP84683.1| efflux transporter, RND family, MFP subunit [Pseudomonas mendocina
ymp]
Length = 340
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 7/242 (2%)
Query: 171 IAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKE 230
I R +F QA+ + +L ++ H + L Q + +D+ + L R ++ L + R +
Sbjct: 88 ITRAEFAQARANLDLAEKNHQRA-QMLFQRGASNAQALDEAQSQLQASRASLALAQARLD 146
Query: 231 NLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG--LAA 288
+++ DG LGL +G +S GQ I + L K++ I + + +V+ G +
Sbjct: 147 KTQIKAPHDGVLGLRQASVGDYLSAGQNIVNLEVLDPLKVDFRIPQKAVAQVRLGQTVEV 206
Query: 289 TFER-QGGNFELSVRKVYPEVRD-GKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESI 346
T + G F + + P + + G+ + G +R GQ +++ L + +++
Sbjct: 207 TLDTYPGERFRGEIYALNPRLDEAGRSQAIRAHIGNDDRRLRPGQFVRVSVILEERPQAL 266
Query: 347 IIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYES 406
+IP+ G + L DG K RR++ +G++ EV EGL+ E V+ + ++
Sbjct: 267 VIPEEAVMPQ-GDKLLVNLLVDG-KVERREVILGKRFDGLVEVREGLQGDETVISAGWQR 324
Query: 407 YK 408
+
Sbjct: 325 VR 326
>gi|150009936|ref|YP_001304679.1| periplasmic component of efflux system [Parabacteroides distasonis
ATCC 8503]
gi|149938360|gb|ABR45057.1| periplasmic component of efflux system [Parabacteroides distasonis
ATCC 8503]
Length = 408
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 92/423 (21%), Positives = 164/423 (38%), Gaps = 93/423 (21%)
Query: 19 IVGGIAFLLLVGWM-IFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLS 77
I+GG+A +L+ G + +F +S + +G T + V G V+P+T V++
Sbjct: 7 IMGGVAVILIAGGVFLFTGKSSKGGIKLETAKVGRST---ITNTVTATGTVEPVTEVEVG 63
Query: 78 PEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQD 137
+ GI+ + + V+ G +I + NL ++ +AEA+LA
Sbjct: 64 TQVSGIIDKLYADYNDVVKAGQLIAEMDKINLQAELRSAEAQLAS--------------- 108
Query: 138 RLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERL 197
+KTE +Q+ Y + + L++++LI+ D+ A +YE + +
Sbjct: 109 ---SKTE-------FEYQQKNYARSKVLHEKQLISDTDYETATYNYEKAKAAY------- 151
Query: 198 HQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQ 257
DQ + ++ + RN+ E + S IDG + V GQ V+ G
Sbjct: 152 -----------DQSQASMVKVNRNL-------EYATITSPIDGVVINRAVEEGQTVAAGF 193
Query: 258 KIGQI----NDLSDYKIEALIDEHYIDRVKAGLAATFERQG---GNFELSVRKV------ 304
+ + DL+ ++ A +DE I V+ G +F FE VR++
Sbjct: 194 ETPTLFTIAADLTKMQVIADVDEADIGNVEEGQRVSFTVDAYPNDQFEGVVRQIRLGDSE 253
Query: 305 ------YPEVRDGKFRTDFVFTGERPD-NIRSGQTYYINLQ-------LGQPTESI-IIP 349
+ V T + PD ++ T I + L P +++ IP
Sbjct: 254 STSSASSSTSSSTVVTYEVVITADNPDLKLKPRLTANITIYTLERANVLTLPNKALRFIP 313
Query: 350 KGTFFQSTGGNWI-----------FVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGER 398
+ +S G V + G R+I +G N EV EGL G+
Sbjct: 314 EPAIMESLGMTVTDPNAEVQPGKRLVWSRQGNTLSPRQITVGTSNNSVTEVTEGLSEGDE 373
Query: 399 VVI 401
V +
Sbjct: 374 VAV 376
>gi|91226392|ref|ZP_01261191.1| putative cation efflux system transmembrane protein [Vibrio
alginolyticus 12G01]
gi|91189206|gb|EAS75486.1| putative cation efflux system transmembrane protein [Vibrio
alginolyticus 12G01]
Length = 572
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Query: 230 ENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAAT 289
+ + +++ DG + L+V G +SP Q + L + ++A + E +KAG AT
Sbjct: 212 QTIEIKAPADGVIASLNVREGGYLSPAQAVISAGPLDNVWVDAEVFERQAHWMKAGSQAT 271
Query: 290 FERQ---GGNFELSVRKVYPEVRDGKFRTDFV-FTGERPDN-IRSGQTYYINLQLGQPTE 344
G ++ V VYP + D K RT V PD ++ I LQ
Sbjct: 272 MTLDAIPGNEWQGVVDYVYP-ILDPKTRTLRVRLKFPNPDGALKPNMFANIALQPVTDDA 330
Query: 345 SIIIPKGTFFQSTGGNWIFVLDKDGKKAYRR-KIRIGRQNPQYYEVLEGLEAGERVVISS 403
+ IPK + +S G + + + DGK YR +I +GR+ + EVL+GL+ G+++V SS
Sbjct: 331 VLTIPKSSVIRSGGMTRVVLAEGDGK--YRSARIEVGREAGEQIEVLQGLKQGDKIVTSS 388
Query: 404 Y 404
+
Sbjct: 389 H 389
>gi|37520064|ref|NP_923441.1| hypothetical protein gll0495 [Gloeobacter violaceus PCC 7421]
gi|35211056|dbj|BAC88436.1| gll0495 [Gloeobacter violaceus PCC 7421]
Length = 436
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 83/360 (23%), Positives = 146/360 (40%), Gaps = 36/360 (10%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQI---LNAEAELAE 122
GQV P V + P+E G++ + V++G VR G ++ ++ S + ++ A A
Sbjct: 66 GQVAPNRKVNVGPKEAGLLTKLYVDQGDAVREGQVLAQMDASRIVSEVAAAKAARDLAAA 125
Query: 123 KQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIA-------RED 175
+ RN E D++R Q ++DI ++E+L+ E+ IA R +
Sbjct: 126 QYQEARNGFRPQEIDQVRADLRAAQANVDIAGNNLV--REERLFTERAIAETQVINRRLE 183
Query: 176 FLQAKEDYELVQQKHALIIERLHQDSIYRS-IQMDQMEDNLANMRRNVLLIRERKENLNV 234
F +A++ + Q+K +L + + + ++DQ E A R N R R +L +
Sbjct: 184 FSRAQDALKAAQEKFSLYKAGTRNEQVLAAKARLDQAE---ATYRNN----RTRLADLTI 236
Query: 235 RSQIDGELGLLDVVLGQNVSP-----GQKIGQINDL---SDYKIEALIDEHYIDRVKAGL 286
R+ G + G VSP G + L ++ A + E I R+K G
Sbjct: 237 RAPFSGIISQRYAQPGAFVSPTVNTSGDSANSSSILLLIDRLEVLATVAESDIARIKVGQ 296
Query: 287 A---ATFERQGGNFELSVRKVYPEVRD----GKFRTDFVFTGERPDNIRSGQTYYINLQL 339
T G F+ +VR V PE +F+ E ++S +N
Sbjct: 297 PVQITTSAYPGTVFKGTVRLVAPEAVTESGITQFQVRVRLDDEAARTLKSRLNVTVNFVA 356
Query: 340 GQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERV 399
G+ +++P G + V D Y R++ G ++L GL GE++
Sbjct: 357 GRVNGVLVVPTTALITRDGKTGVLVPDAKKGPTY-REVGTGVSLGDKTQILSGLSDGEKL 415
>gi|110598237|ref|ZP_01386513.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
gi|110340152|gb|EAT58651.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
Length = 417
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 93/435 (21%), Positives = 188/435 (43%), Gaps = 93/435 (21%)
Query: 19 IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSP 78
I+ G A LL+ G ++F LR ++ ++ V G+++P VV +SP
Sbjct: 13 ILLGCAALLIAGGVLFA--VIRLREKPVVVTTEKAFIKEVVHLVTATGKIEPELVVAMSP 70
Query: 79 EEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDR 138
+ G + E V++G V +GD++ ++ D+ I E LA+ N R+ + + +
Sbjct: 71 DVSGEIIELPVKDGQSVSQGDLLFKIQP---DIYINQVEQSLAQ-LNAARSQNLEAQSRK 126
Query: 139 LRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLH 198
L+ + + +R+ LY E+LI+ DF+ +K + + + +
Sbjct: 127 LKAEDD--------------FRKASLLYRERLISESDFIASKTNAQAARAT--------Y 164
Query: 199 QDSIYRSIQ----MDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDV-----VL 249
Q S+Y Q +DQ +D L K+++ VR+ I G + L+ V+
Sbjct: 165 QSSLYTIAQNKSLLDQNQDRL-------------KKSI-VRAPISGSIIALNSKPGERVV 210
Query: 250 GQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG--LAATFERQGGNF------ELSV 301
G PG ++ ++ +L +++ ++E+ I VKAG ++ T + G E+S
Sbjct: 211 GTGQFPGTEVLRLANLDSMQVKVEVNENDIVNVKAGNPVSITVDAYGDRIFRGIVHEISN 270
Query: 302 RKVYPEVRDGKFRTDF-----VFTGERPDNIRSGQTYYINLQLGQPTESIIIP-KGTFFQ 355
+ + T+F +F +R ++ G + +++ + +++++P + +
Sbjct: 271 SAISKAAGTQEEVTNFSVKIRIFNHDRL--LKPGMSATADIEAQRVKDALVVPIQSVTMR 328
Query: 356 STGG------------------------NWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLE 391
S+G +FV+ +G KA+ R ++ G + + V
Sbjct: 329 SSGAAAQMVKPEKSDITIISKTRAPESRQGVFVI--NGGKAWFRPVKTGTTDNTHIIVTG 386
Query: 392 GLEAGERVVISSYES 406
GL+ GE VV SY +
Sbjct: 387 GLKKGEEVVSGSYTA 401
>gi|114799816|ref|YP_760354.1| efflux transporter, RND family, MFP subunit [Hyphomonas neptunium
ATCC 15444]
gi|114739990|gb|ABI78115.1| efflux transporter, RND family, MFP subunit [Hyphomonas neptunium
ATCC 15444]
Length = 447
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 53/297 (17%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQN 125
G+V P V + + G + E +VE G V G ++ R+ + + + + A+L E Q
Sbjct: 52 GKVAPKDTVAVGAQVSGQLTELLVEAGDLVEEGQLLARIDATIAETNVEGSRAQLLELQA 111
Query: 126 LLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYEL 185
Q T+E + K+ L++ +AR DF ++ +Y +
Sbjct: 112 SRTQQQATLELAKANADRAKM------------------LFENDAVARADFEASQAEYAI 153
Query: 186 -VQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGL 244
V + A+ + Q S R++Q E N+ + I G +
Sbjct: 154 AVGRLEAINAQITRQSSSLRALQATL-------------------EFTNIYAPISGTVVS 194
Query: 245 LDVVLGQNVSPGQKIGQINDLSDYKI---EALIDEHYIDRVKAGLAATFERQGGN---FE 298
L+ V GQ ++ Q I L+D I E + E + RVK G AA F G + +E
Sbjct: 195 LEAVEGQTLNANQTAPTILTLADLTIMTVETDVSEADVLRVKPGQAAWFSTLGDSSRRWE 254
Query: 299 LSVRKVY--PEVRDGKFRTDFVFTGERPDNI----RSGQTYYINLQLGQPTESIIIP 349
SVR++ PEV + + E P+N+ + Q +++ G ++I++P
Sbjct: 255 TSVRQILPTPEVLNDVVLYKALLDIENPENLLKPEMTAQVFFVT---GSAKDAILVP 308
>gi|29654088|ref|NP_819780.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii RSA
493]
gi|29541354|gb|AAO90294.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii RSA
493]
Length = 348
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 173 REDFLQAKEDYELVQ---QKHALIIER--LHQDSIYR-SIQMDQMEDNLANMRRNVLLIR 226
+ D AK D EL + Q+ AL +++ + Q ++Y + +D+ + LA + L
Sbjct: 102 KNDLAAAKADVELSELQYQRDALALKKGLILQTTVYSDKVSLDK-DKALAQTDQTAL--- 157
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
+++ +R+ G LG LG V+PGQK+ + D K+ + H+ +++ G
Sbjct: 158 ---QDMTLRAPFSGYLGAKQFSLGDYVTPGQKLVTLVDQQKLKVVYDLPNHFAPQLQIGQ 214
Query: 287 AATFERQ---GGNFELSVRKVYPEVR-DGKFRTDFVFTGERPDNIRSGQTYYINLQLGQP 342
T G F V V P V D + + ++ GQ ++ L
Sbjct: 215 PVTVTADFLPGQRFNGKVNYVAPYVNSDSQTIETQALLNNKNGALKPGQFVTVSQTLETL 274
Query: 343 TESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
++I+IP+ + F + G+++F + K+GK A +++G + ++++GL+ G+ ++ +
Sbjct: 275 KKAILIPENSLFANMNGHYVFKV-KNGK-AISTPVKVGERLYGKVQIIDGLKPGDHIITT 332
Query: 403 SYESYKNS 410
+ S
Sbjct: 333 GQDQIYKS 340
>gi|154706493|ref|YP_001424162.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii
Dugway 7E9-12]
gi|154355779|gb|ABS77241.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii
Dugway 7E9-12]
Length = 348
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 173 REDFLQAKEDYELVQ---QKHALIIER--LHQDSIYR-SIQMDQMEDNLANMRRNVLLIR 226
+ D AK D EL + Q+ AL +++ + Q ++Y + +D+ + LA + L
Sbjct: 102 KNDLAAAKADVELSELQYQRDALALKKGLILQTTVYSDKVSLDK-DKALAQTDQTAL--- 157
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
+++ +R+ G LG LG V+PGQK+ + D K+ + H+ +++ G
Sbjct: 158 ---QDMTLRAPFSGYLGAKQFSLGDYVTPGQKLVTLVDQQKLKVVYDLPNHFAPQLQIGQ 214
Query: 287 AATFERQ---GGNFELSVRKVYPEVR-DGKFRTDFVFTGERPDNIRSGQTYYINLQLGQP 342
T G F V V P V D + + ++ GQ ++ L
Sbjct: 215 PVTVTADFLPGQRFNGKVNYVAPYVNSDSQTIETQALLNNKNGALKPGQFVTVSQTLETL 274
Query: 343 TESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
++I+IP+ + F + G+++F + K+GK A +++G + ++++GL+ G+ ++ +
Sbjct: 275 KKAILIPENSLFANMNGHYVFKV-KNGK-AISTPVKVGERLYGKVQIIDGLKPGDHIITT 332
Query: 403 SYESYKNS 410
+ S
Sbjct: 333 GQDQIYKS 340
>gi|75909070|ref|YP_323366.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
gi|75702795|gb|ABA22471.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
Length = 517
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 93/453 (20%), Positives = 176/453 (38%), Gaps = 75/453 (16%)
Query: 19 IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSP 78
IVGGI + + + + RV + V + V +G V+P V LSP
Sbjct: 35 IVGGIGYAIYYQLTVVPRQQARSRVLTQA-----VERQTLPITVSANGTVKPERSVNLSP 89
Query: 79 EEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDR 138
+ GI+++ +V+EG V++G ++ + +SNL Q+++A+ +LA+ + L+ Q
Sbjct: 90 KNSGILKQLLVKEGDVVKQGQVLAYMDDSNLRGQLISAQGQLAQAEANLQKVQAGNRPQD 149
Query: 139 LRNKTEKLQLDLDITRRQRTYRQQEKLYDEKL---IAREDFLQAKEDYELVQQKH---AL 192
+ +L L R+ T + + + + A+ QA++D QQ + A+
Sbjct: 150 IGQSQAQLDEALANLRKLETGNRPQDIAQAQARLKSAQASLTQAEDDLRRNQQLYNDGAI 209
Query: 193 IIERLHQDSIYRSIQMDQMEDNLA------------NMRRNVLLIRERKENLNV------ 234
++ ++Q R Q+ + ++ + +R+R+E L +
Sbjct: 210 ALQVVNQKRTERDSAQAQVNEAQQALALQQAGSRQEDIEQARATVRQRQEALALLKAGNR 269
Query: 235 -------RSQIDGELGLL--------DVVL---------------GQNVSPGQKIGQIND 264
R+Q+ G L D VL G V+P ++
Sbjct: 270 REDIDAARAQVTSARGSLQNTQAQINDTVLRAPFDGIVTQKYADPGAFVTPTTSGSAVSS 329
Query: 265 LSDYKIEAL---------IDEHYIDRVKAGLAATFERQ---GGNFELSVRKVYPEVRDGK 312
+ I AL + E I +++ G T G FE V ++ + +
Sbjct: 330 ATSSSILALASRNEVVANLSESNIAKIRLGQKVTITADAYPGRTFEGKVSQIAAQATVEQ 389
Query: 313 FRTDFVFTGERPDN---IRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDG 369
T F D+ +RSG Q GQ ++++P + +FV +
Sbjct: 390 NVTSFQVKVSLSDSQRLLRSGMNVSAEFQAGQLDNALVVPTAAVVRRENATGVFVSGANN 449
Query: 370 KKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+ + I+ G + EV GL+ ERV++S
Sbjct: 450 RPVF-TPIKTGATVNSFTEVQSGLKGNERVLLS 481
>gi|126656746|ref|ZP_01727960.1| Secretion protein HlyD [Cyanothece sp. CCY0110]
gi|126621966|gb|EAZ92674.1| Secretion protein HlyD [Cyanothece sp. CCY0110]
Length = 458
Score = 58.2 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 65 DGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQ 124
+G V+P +V +SP+ GI++E +EEG V++G +I ++ +SNL Q++ +E +LAE Q
Sbjct: 4 NGTVEPKKLVNVSPKNAGILRELFIEEGDYVKKGQLIAKMDDSNLLGQLIESEGKLAEAQ 63
Query: 125 NLLR---NTQVTMEQDRLRNKTEKLQLDLD--IT--RRQRTYRQQEKLYDEKLIAREDFL 177
LR N + E + K E+L+ +L IT R Q + Q +L + A+ F
Sbjct: 64 ANLRKLINGNRSQEIAQAEAKLEQLEANLKKLITGNRSQEIAQAQARLIN----AQATFE 119
Query: 178 QAKEDYE 184
QA+++++
Sbjct: 120 QAEDEFK 126
>gi|150388437|ref|YP_001318486.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
metalliredigens QYMF]
gi|149948299|gb|ABR46827.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
metalliredigens QYMF]
Length = 410
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 83/375 (22%), Positives = 163/375 (43%), Gaps = 29/375 (7%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
+ + VT +V G V+ + + G V + +V+EG QV GD++VRL +
Sbjct: 31 VEMAAVTQGNIAKYVEELGVVKTKNQASVYADTAGRVTDVLVKEGEQVNTGDVLVRLDSQ 90
Query: 108 NLDLQILNAEAE-LAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLY 166
L Q EA+ L TQ E++ + + E ++ I +R ++LY
Sbjct: 91 QLSRQKRELEAQRLGIIAQYNEATQSIDEKEIEKLELEIEVIERRIKEAKRVVENNKRLY 150
Query: 167 DEKLIAREDF------LQAKE-DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMR 219
+ I+ E++ L+A++ + E VQ LI + I +I Q E L +
Sbjct: 151 EAGAISYEEYNITVTSLEAEQSNLEGVQLDLELI-----KKPISENISA-QYEAQLRQLD 204
Query: 220 RNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYI 279
+ + + + + + + G + + V G V PG + +I D IE+ + I
Sbjct: 205 IQMEALESQSGDFVITAHMSGTVLMKAVEKGSYVQPGVPLLEIGDTEILYIESDLLIGDI 264
Query: 280 DRVKAGLAATFERQGG---NFELSVRKVYPE---------VRDGKFRTDFVFTGERPDNI 327
V+ G + + + +V K++P+ + + + D F G +
Sbjct: 265 ANVEVGAPVIISNKDLRIIDLQGTVTKIHPQAFSSVSDLGIEQKRIKVDIEFEGSVAI-L 323
Query: 328 RSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYY 387
R G +N+ + ++IP+ FQ G +++FV ++A R+I G ++ +
Sbjct: 324 RPGYDLDVNIIIESKENVLLIPENAIFQQAGRDFVFV--NVNEQAILREIEKGIESQRRV 381
Query: 388 EVLEGLEAGERVVIS 402
E++ GL+ G++V++S
Sbjct: 382 EIVSGLQKGDQVIVS 396
>gi|145300464|ref|YP_001143305.1| ABC-type macrolide transporter, membrane fusion protein [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142853236|gb|ABO91557.1| ABC-type macrolide transporter, membrane fusion protein [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 384
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 68/363 (18%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V DG +Q +V + + G ++ V G QV++GD++V + + + +AEA L
Sbjct: 50 VLADGTLQAQKLVSVGAQVSGQIKVLHVALGDQVKQGDLLVEIDDLTQQNALKDAEAALD 109
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
Q L + + T+ + L + RQR K++AR L ++
Sbjct: 110 NVQAQLASRRATLRNNGL------------VFDRQR-----------KVLARG--LGSQA 144
Query: 182 DYELVQQKHALIIER-----LHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRS 236
DY+ + LI R L ++ I +D NL R + +
Sbjct: 145 DYDSAEA--TLIATRADIRALIAQAVQARIAVDTARVNLGYTR--------------IVA 188
Query: 237 QIDGELGLLDVVLGQNVSPGQK---IGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQ 293
+ G + + V GQ V+ Q I ++ L +EA I E + RV GL F
Sbjct: 189 PMAGTIVAIPVEQGQTVNAVQSTPTIVKVARLDTMTVEAQISEADVIRVSTGLPIYFTIL 248
Query: 294 GG---NFELSVRKVYP---EVRDGKFRT-------DFVFTGERPDN-IRSGQTYYINLQL 339
G +E +R + P + D + + +F P+ +R G T ++L L
Sbjct: 249 GAPEHRYEARLRAIEPAPDSINDDTSSSTTTAVYYNGLFEVSNPEGALRIGMTAQVHLVL 308
Query: 340 GQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERV 399
+++IP + G+ + V+D GK +R ++++G N ++L GLEAGE V
Sbjct: 309 ATERNALVIPA----IALSGDRVQVVDGAGKLQWR-QVKVGLNNKVDAQILSGLEAGESV 363
Query: 400 VIS 402
V+S
Sbjct: 364 VVS 366
>gi|83951073|ref|ZP_00959806.1| HlyD family secretion protein [Roseovarius nubinhibens ISM]
gi|83838972|gb|EAP78268.1| HlyD family secretion protein [Roseovarius nubinhibens ISM]
Length = 366
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 168 EKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE 227
+ +IAR D +A+ + L + + + +L Q + ++ LA R V +
Sbjct: 104 DDVIARADLAEAQARF-LERDRVLTRLTQLRQSNAVSEAAREEAVARLAEARAQVDRAEQ 162
Query: 228 RKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLA 287
R + + G LGL +V G VS G I +++DLS+ +IE I E R+K G+
Sbjct: 163 RLAERTILAPFAGTLGLAEVDQGARVSAGTFITRLDDLSEVEIEFSIPETLFSRIKTGMK 222
Query: 288 AT-----FERQG--GNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLG 340
T F Q G ++ P R FRT V D + +G + L L
Sbjct: 223 ITATSVAFPDQEFIGTISEVDSRIDPVSR--AFRTRAVVPNP-GDTLPAGMFMSLELVLS 279
Query: 341 QPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
Q E+++ + FQ+ V+D KA R ++ G + + EGLE G++VV
Sbjct: 280 QSDETVVPEEAIVFQAAETYVFAVID---GKAQRVTVKTGPRRNGMISIREGLEPGDQVV 336
>gi|95926295|ref|ZP_01309095.1| hypothetical protein CburR_01001889 [Coxiella burnetii RSA 331]
Length = 348
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 173 REDFLQAKEDYELVQ---QKHALIIER--LHQDSIYR-SIQMDQMEDNLANMRRNVLLIR 226
+ D AK D EL + Q+ AL +++ + Q ++Y + +D+ + LA + L
Sbjct: 102 KNDLAAAKADVELSELQYQRDALALKKGLILQTTVYSDKVSLDK-DKALAQTDQTAL--- 157
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
+++ +R+ G LG LG V+PGQK+ + D K+ + H+ +++ G
Sbjct: 158 ---QDMTLRAPFSGYLGAKQFSLGDYVTPGQKLVTLVDQQKLKVVYDLPNHFAPQLQIGQ 214
Query: 287 AATFERQ---GGNFELSVRKVYPEVR-DGKFRTDFVFTGERPDNIRSGQTYYINLQLGQP 342
T G F V V P V D + + ++ GQ ++ L
Sbjct: 215 PVTVTADFLPGQRFNGKVNYVAPYVNSDSQTIETQALLNNKNGALKPGQFVTVSQTLETL 274
Query: 343 TESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
++I+IP+ + F + G+++F + K+GK A +++G + ++++GL+ G+ ++ +
Sbjct: 275 KKAILIPENSLFANMNGHYVFKV-KNGK-AISTPLKVGERLYGKVQIIDGLKPGDHIITT 332
Query: 403 SYESYKNS 410
+ S
Sbjct: 333 GQDQIYKS 340
>gi|115525949|ref|YP_782860.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
palustris BisA53]
gi|115519896|gb|ABJ07880.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
palustris BisA53]
Length = 425
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/349 (22%), Positives = 144/349 (41%), Gaps = 22/349 (6%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G ++ V++ + G V++ +V+EG QVR+G ++ + S L ++ E +A
Sbjct: 72 VVASGHIETPFRVEIGSQITGTVKDVLVKEGQQVRQGQELIAIEASELQAAVVQNEGAVA 131
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDE--KLIAREDFLQA 179
+ + +R +LR T K D + + Q E Y+ KL A +A
Sbjct: 132 QAEARVR---------QLRELT-KPAADQSLNQAQANLLNAEAAYERASKLAAGGFGTRA 181
Query: 180 KEDYELVQQKHALIIERLHQDSIYRSIQMDQ----MEDNLANMRRNVLLIRERKENLNVR 235
D A + R + +Y S + + LA + N+ R R +
Sbjct: 182 TLDEATKNLNVARTLVRTAELQVYTSSPVGSDFVMAQTQLAQAQANLTTARARLGYATIT 241
Query: 236 SQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG---LAATFER 292
+ DG L +V G V PG+ + + D +I IDE + ++ G LA+
Sbjct: 242 APRDGVLITRNVERGSVVQPGKALLVLAPAGDSQIVVQIDEKNLGQLALGQPALASADAY 301
Query: 293 QGGNFELSVRKVYPEVRDGKFRTDF-VFTGERPDNIRSGQTYYINLQLGQPTESIIIPKG 351
F ++ + P V + + + E PD +R T +++ + +I+P
Sbjct: 302 PDRRFNATLSYINPSVDINRASVEVKLAVTEPPDYLRQDMTVSVDIATARRDNVVILPAR 361
Query: 352 TFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
G FVL +A + +++G + +YEV EGL+ G+ V+
Sbjct: 362 AV--QDGSTSPFVLKVSEGRAVVQPVKLGLRGVGFYEVTEGLQPGDLVI 408
>gi|150388202|ref|YP_001318251.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
metalliredigens QYMF]
gi|149948064|gb|ABR46592.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
metalliredigens QYMF]
Length = 386
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 84/356 (23%), Positives = 156/356 (43%), Gaps = 43/356 (12%)
Query: 58 FNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAE 117
+++ + + G V P +V+LS + G+V +V EG V+ G I + + +++ ++
Sbjct: 43 YSNDLTLSGNVVPTQMVKLSFKIPGVVSNVLVNEGDVVKEGQPIATMEQGDYLIRVKASQ 102
Query: 118 AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQ---QEKLYDE---KLI 171
AEL E L T++ + ++ + + E ++ D R + + Q + DE KLI
Sbjct: 103 AEL-EAARLQIETEIPAKTNQAKAQYELTKIKYD--RVKALFEQGAVSQSQLDEISTKLI 159
Query: 172 ARED-FLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKE 230
E+ + QA + E+ + K +QM + +LAN N+
Sbjct: 160 VDENTYNQAVDAKEVAETK----------------LQMAEASLDLANA--NI-------S 194
Query: 231 NLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATF 290
+ + S IDG + V G+ S G I I +++ E + + YI+ ++ G +
Sbjct: 195 DTTIYSPIDGVILQKIVASGETTSGGHPIVVIGEVNKVWAEIGVSDEYINALRIGQKSDV 254
Query: 291 ERQGGNFELSVRKVYPEV---RDGKFRTDFV--FTGERPDNIRSGQTYYINLQLGQPTES 345
G + +V + E+ D K RT V ++ G +NL L E
Sbjct: 255 YIYG--IDKTVEGIIDEIAFLADTKTRTFPVKILLNNPNGELKPGMITKVNLNLSN-KEK 311
Query: 346 IIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVI 401
++IP + Q + G+ ++V ++ + R I G EV+EGLE E++VI
Sbjct: 312 MLIPLSSVLQLSTGSAVYVYSEETQTVSMRMIETGEIVKDKIEVIEGLELDEKIVI 367
>gi|126664701|ref|ZP_01735685.1| Secretion protein HlyD [Marinobacter sp. ELB17]
gi|126631027|gb|EBA01641.1| Secretion protein HlyD [Marinobacter sp. ELB17]
Length = 375
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 76/363 (20%), Positives = 135/363 (37%), Gaps = 77/363 (21%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
IS+ EQ+ V+ G + + + ++ E G++Q+ E G V +GD+++RL
Sbjct: 45 ISVVQSQTEQWTPTVKAVGSIVAVNGIDVANEVPGVIQQINFESGDLVSKGDVLIRLD-- 102
Query: 108 NLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYD 167
+E+ LR + + QL ++ +++ L
Sbjct: 103 ------------------------AAIEEAALRTRGAEAQL------ARQEFQRIADLLP 132
Query: 168 EKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRE 227
++ +++ + QAK +Y+ + + + A + + V
Sbjct: 133 KRAVSQSQYDQAKANYDAANAR---------------------VNEAEAQLSKKV----- 166
Query: 228 RKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL- 286
+R+ DG LG+ V GQ + G I +IN L + + E + V G
Sbjct: 167 ------IRAPFDGTLGIRLVDQGQYIGTGTPIVEINMLDPIYADYTLSEKNLPDVAVGYS 220
Query: 287 ------AATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLG 340
AA G V + R + R R +R G +N +
Sbjct: 221 VVATVAAAPNTEFKGTVSAINTSVNADTRSVRIRATL---ANRDQRLRPGMFATVNTRQP 277
Query: 341 QPTESIIIPKGTFFQSTGGNWIFVL---DKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGE 397
+ +P+ +T G++ FV+ D+ K RR +R G VLEGLEAGE
Sbjct: 278 DDITVVTVPRTAISYNTYGDFAFVVEDNDQGQKVVTRRSVRSGDARDDRVAVLEGLEAGE 337
Query: 398 RVV 400
VV
Sbjct: 338 TVV 340
>gi|156859539|gb|EDO52970.1| hypothetical protein BACUNI_03767 [Bacteroides uniformis ATCC 8492]
Length = 360
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 80/351 (22%), Positives = 141/351 (40%), Gaps = 75/351 (21%)
Query: 58 FNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAE 117
D +++ G + P V LS E G + E EEG+ V++G ++ ++++ L Q+
Sbjct: 62 LKDEIQISGSLLPDEEVDLSFETSGKIIEINFEEGSFVKKGQLLAKVNDRPLQAQL---- 117
Query: 118 AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
Q L+ +Q+ + +DR+ +RQ L + +
Sbjct: 118 ------QRLV--SQLKLAEDRV-------------------FRQNALLERDAV------- 143
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
+KE YE Q++ LA + ++ LI +R+
Sbjct: 144 -SKEAYE-------------------------QVKTELATLNADIDLIESNIAQTELRAP 177
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVK--AGLAATFERQGG 295
DG +GL V +G SP + ++ +S K+E + E Y + VK AGL T E +
Sbjct: 178 FDGVIGLRQVSVGTYASPTTIVAKLTKISPLKVEFAVPERYANDVKTGAGLDFTLEGKLN 237
Query: 296 NFELSV----RKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKG 351
F +V K+ P R + + G+ I L + +++ +P
Sbjct: 238 TFHATVYARESKIDPTTHTLTIRALY---PNANGAVLPGRYASIKLNKDEIQDALAVPSE 294
Query: 352 TFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
G + IF L K G KA +I G + +VL+GL+AG+ ++ S
Sbjct: 295 AIVPEMGKDKIF-LYKSG-KAQPVEITTGIRTEAEVQVLQGLQAGDTIITS 343
>gi|58582642|ref|YP_201658.1| hypothetical protein XOO3019 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84624529|ref|YP_451901.1| RND multidrug efflux membrane fusion protein MexC precursor
[Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427236|gb|AAW76273.1| unknown protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368469|dbj|BAE69627.1| RND multidrug efflux membrane fusion protein MexC precursor
[Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 370
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/358 (22%), Positives = 140/358 (39%), Gaps = 79/358 (22%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQN 125
G+V P+ V Q+ GIV + EEG+ V+ G ++ ++ + + + EL +
Sbjct: 56 GRVSPMRVAQVRARVAGIVLARRFEEGSDVKAGQVLFQIDPAPFEAAVARGRGELTRSEA 115
Query: 126 LLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYEL 185
L N E + ++L ++I+R+DF A+ +++
Sbjct: 116 ELENATAQFE-------------------------RSQQLVQRQVISRQDFDTARSNFKS 150
Query: 186 VQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLL 245
Q A L + Q++ A VR+ IDG +G
Sbjct: 151 TQAAVASARAAL---------KTAQLDLGFA----------------TVRAPIDGRIGR- 184
Query: 246 DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYID---RVKAGLAATFERQGGNFELSVR 302
V+ G +GQ D ++ + +D + D V L + G+ L V
Sbjct: 185 -----ALVTEGALVGQGGDATEMALVQQLDPIFADFNRPVAEALKLRGRARKGDAPLKVV 239
Query: 303 KVYPEVRDGKFRTDFVFTGERPD------NIRSGQTYYINLQL-----------GQPTES 345
PE+ + + D +F R D ++R+ NL L G +++
Sbjct: 240 IDIPELGETR-EGDLLFADMRVDETTDTVSLRAQFDNRDNLLLPGMFVRVRTPNGTASDA 298
Query: 346 IIIPKGTFFQSTGGN-WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+ +P+ + GGN + V+ DG KA R +R G +++L+GL+AGER V S
Sbjct: 299 VYVPQRGIQRRPGGNAAVMVVGADG-KAELRDVRTGAMVGTDWQILDGLKAGERYVAS 355
>gi|126645596|ref|ZP_01718140.1| membrane fusion efflux protein, putative [Algoriphagus sp. PR1]
gi|126579007|gb|EAZ83171.1| membrane fusion efflux protein, putative [Algoriphagus sp. PR1]
Length = 431
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 30/278 (10%)
Query: 14 KHLPYIVGGIAFLLLVGWMIFGNHASTLR-VDARGISIGHVTHEQFNDFVRVDGQVQPIT 72
K L Y++G + +++ + I G A + + Q + V G++QP
Sbjct: 8 KLLYYLLGAVGVIIV--FAIIGRAAGWVGGAKETEVEFAKAKRAQIIEKVSASGEIQPEV 65
Query: 73 VVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQV 132
V+LSP+ G + E V EG V G ++V++ N + A+A L ++ L +
Sbjct: 66 EVKLSPDVAGEIIELNVIEGDSVAEGKLLVKIRPDNFISALDRAKANLNQQMANLAQAKA 125
Query: 133 TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
++++ + T+ + Y +Q+ LY++K I+ DF A+ +Y Q+
Sbjct: 126 SLQRS-----------EAQFTQAELNYNRQKGLYEQKAISDADFETAQANYITAQKD--- 171
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQN 252
+E Q+ I + + + N+ L NV S +DG + L V G+
Sbjct: 172 -LEAAKQNVIASEFVVKSSQATVNESAENLRLT-------NVYSPVDGIVSNLLVEKGER 223
Query: 253 VSPGQKIG-----QINDLSDYKIEALIDEHYIDRVKAG 285
V Q++ I DLS ++ ++E+ I R+ G
Sbjct: 224 VVGTQQMAGTEMLTIADLSKMEVRVDVNENDIIRLSMG 261
>gi|145219527|ref|YP_001130236.1| efflux transporter, RND family, MFP subunit [Prosthecochloris
vibrioformis DSM 265]
gi|145205691|gb|ABP36734.1| efflux transporter, RND family, MFP subunit [Prosthecochloris
vibrioformis DSM 265]
Length = 404
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/244 (22%), Positives = 110/244 (45%), Gaps = 43/244 (17%)
Query: 48 ISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
+++ T ++ V G++QP T V +SP+ G + E V+EG V +G ++ ++
Sbjct: 40 VTVEPATRKEIVHIVTATGKIQPETDVAISPDVSGEIIELPVKEGQSVEKGTLLFKIQPD 99
Query: 108 NLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYD 167
Q+ ++A+L + ++ L ++ + + D D +R+ E LY+
Sbjct: 100 VYFNQVEQSQAQLNQARS-----------QSLEARSRQFKADDD-------FRKAELLYE 141
Query: 168 EKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQ-MEDNLANMRRNVLLIR 226
EKLI+ D+L +K + + + +Q S Y Q +E N +++ V
Sbjct: 142 EKLISETDYLASKTNADAARAA--------YQSSTYAIAQNKSLLEQNQDRLKKTV---- 189
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVS-----PGQKIGQINDLSDYKIEALIDEHYIDR 281
VR+ I G + L LG+ V PG ++ ++ +L ++E ++E+ I
Sbjct: 190 -------VRAPITGSIISLTSKLGERVVGTGQFPGTEVMRLANLDSMQVEVEVNENDIVN 242
Query: 282 VKAG 285
V G
Sbjct: 243 VHTG 246
>gi|117617817|ref|YP_857493.1| macrolide-specific efflux protein MacA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559224|gb|ABK36172.1| macrolide-specific efflux protein MacA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 387
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 80/409 (19%), Positives = 172/409 (42%), Gaps = 65/409 (15%)
Query: 29 VGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKV 88
+GW+I+ + + A+ VT + V G +Q I V + + G V
Sbjct: 21 IGWLIWPSKTPEPVLTAQ------VTRQDVEQTVLASGVLQAIEQVDVGAQVSGQVTYLA 74
Query: 89 VEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQL 148
VE G +V++GD++ + + AEA+LA ++ L+ Q ++Q+ L
Sbjct: 75 VEAGQKVKQGDLLAEIDPLIAQNNLKTAEADLASRRAQLKIKQAQLKQNEL--------- 125
Query: 149 DLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQM 208
++R+Q++++ ++ +R D A+ + + + ++ + I++
Sbjct: 126 ---------SWRRQQQMFRQEASSRADLESAEALLAVTKAE----LQSAQAEVENAQIKV 172
Query: 209 DQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIG---QINDL 265
++ + L R +++ +DG + + GQ ++ Q + ++ +L
Sbjct: 173 ERTKTELGYNR--------------IQAPMDGTVVSIVTRQGQTLAASQTVPTLLKLANL 218
Query: 266 SDYKIEALIDEHYIDRVKAGLAATFERQGG----------NFELSVRKVYPEVRDGKFRT 315
++A I E + RVKAG+ F G EL+ + + +
Sbjct: 219 ETMTVKAQISEADVTRVKAGMPVYFTLMGDPDTRYHGTLRTVELAPTNINEQATSTTTTS 278
Query: 316 D------FVFTGERPDN-IRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN--WIFVLD 366
+ +F PD+ +R T + + LG+ + + IP+ + G N + +L
Sbjct: 279 NAAVYYYALFDVPNPDHTLRVAMTTQVTIVLGERKQVLTIPQTALGKKLGENEYEVTLLK 338
Query: 367 KDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
+D +K RR I+ G ++ EV+ GL E+V + + N+++ I+
Sbjct: 339 EDDQKETRR-IKTGMKDDIKIEVVSGLSEQEKVTLGQGKPASNNDVEIM 386
>gi|153209395|ref|ZP_01947381.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii 'MSU
Goat Q177']
Length = 348
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 173 REDFLQAKEDYELVQ---QKHALIIER--LHQDSIYR-SIQMDQMEDNLANMRRNVLLIR 226
+ D AK D EL + Q+ AL +++ + Q ++Y + +D+ + LA + L
Sbjct: 102 KNDLAAAKADVELSELQYQRDALALKKGLILQTTVYSDKVSLDK-DKALAQTDQTAL--- 157
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
+++ +R+ G LG LG V+PGQK+ + D K+ + H+ +++ G
Sbjct: 158 ---QDMTLRAPFSGYLGAKQFSLGDYVTPGQKLVTLVDQQKLKVVYDLPNHFAPQLQIGQ 214
Query: 287 AATFERQ---GGNFELSVRKVYPEVR-DGKFRTDFVFTGERPDNIRSGQTYYINLQLGQP 342
T G F V V P V D + + ++ GQ ++ L
Sbjct: 215 PVTVTADFLPGQRFNGKVNYVAPYVNSDSQTIETQALLNNKNGALKPGQFVTVSQTLETL 274
Query: 343 TESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
++I+IP+ + F + G+++F + K+GK A +++G + ++++GL+ G ++ +
Sbjct: 275 KKAILIPENSLFANMNGHYVFKV-KNGK-AISTPVKVGERLYGKVQIIDGLKPGNHIITT 332
Query: 403 SYESYKNS 410
+ S
Sbjct: 333 GQDQIYKS 340
>gi|113935609|ref|ZP_01421506.1| Secretion protein HlyD [Caulobacter sp. K31]
gi|113729844|gb|EAU10917.1| Secretion protein HlyD [Caulobacter sp. K31]
Length = 431
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 83/367 (22%), Positives = 137/367 (37%), Gaps = 40/367 (10%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEA---ELAE 122
G + P V + +V+ E GA V G +V L S + + AEA + +
Sbjct: 63 GAIVPGDSVDVVAPFDAVVRSVHFEYGAAVTAGQTLVELDASEVSQRRNEAEAGYLKASR 122
Query: 123 KQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKED 182
L N E R R DL+ +R R+ + L D L+AR ++
Sbjct: 123 AAEALANWSTGAEASRARRAVNTAASDLN--DMERKIREVKGLLDRGLVARGEY------ 174
Query: 183 YELVQQKH----ALIIERLHQDSIYRSIQMDQMED---NLANMRRNVLLIRERKENLNVR 235
LVQQ+ AL R D + Q + +L N R + + + VR
Sbjct: 175 DGLVQQRRGQETALAAARQDLDEVLARGQASNRREAALDLQNARLQLARLNGQMAGAVVR 234
Query: 236 SQIDGEL--------GLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLA 287
+ DG + V GQ ++ GQ IG I + + E +RV+ G+A
Sbjct: 235 APTDGIIVRPPGKAEAAEAVHAGQALTRGQLIGSIARSGGLAVAFQLSETDANRVRPGMA 294
Query: 288 ATFERQG-------GNFELSVRKVYPEVRDGKFRTDFV-------FTGERPDNIRSGQTY 333
T G G+ + P G F T + +R G T
Sbjct: 295 VTVTGPGFGDIVASGHVSAVAGEAAPTTAAGGPLASFPAVARLDGLTPRQAAAVRIGMTA 354
Query: 334 YINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGL 393
+ + L + +++ P + W+ V + G+ + +++G+ P E+L GL
Sbjct: 355 NVVVDLYRSPAALVAPTAAIQGAAPAAWVRVKNPHGEGSRVVPVKLGQSAPDGIEILAGL 414
Query: 394 EAGERVV 400
+AG+ VV
Sbjct: 415 KAGDVVV 421
>gi|39997874|ref|NP_953825.1| efflux transporter, RND family, MFP subunit [Geobacter
sulfurreducens PCA]
gi|39984819|gb|AAR36175.1| efflux transporter, RND family, MFP subunit [Geobacter
sulfurreducens PCA]
Length = 372
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 89/412 (21%), Positives = 160/412 (38%), Gaps = 89/412 (21%)
Query: 19 IVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSP 78
++GGI L +G MI +H +S V E + + G + + V ++
Sbjct: 18 VLGGIK-ALQIGTMI--DHGKKFVPPPETVSTAPVKAESWETALTSVGTLTAVQGVTVAA 74
Query: 79 EEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNA--EAELAEKQNLLRNTQVTMEQ 136
E G V + E GA V RG +++R SN + Q+ A EA+LA + NL
Sbjct: 75 ELPGKVVQIAFEAGAPVARGALLLRQDTSNEEAQLPGALAEAKLA-RANL---------- 123
Query: 137 DRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIER 196
R+ ++L E +IA+ D
Sbjct: 124 -----------------------RRSDQLLAEGIIAQAD--------------------- 139
Query: 197 LHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPG 256
H ++ + Q DN IR ++R+ G LG+ V LGQ + G
Sbjct: 140 -HDSAVATANQAQAQVDN----------IRATIAKKSIRAPFSGRLGIRQVNLGQILREG 188
Query: 257 QKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQ---GGNFELSVRKVYPEV----R 309
I + + ++ + + + +++ GL G E + + PEV R
Sbjct: 189 DPIVTLQSMDPIFVDFTLPQQQLPQLRKGLTVRVTGDALPGETIEGRITAINPEVDAESR 248
Query: 310 DGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTES--IIIPKGTFFQSTGGNWIFVL-- 365
+ K + GE+ +R G ++N+ +G P + + IP + + +FV+
Sbjct: 249 NIKVQATVANRGEK---LRPGM--FVNVAVGLPVQEKVLAIPATAVLYAPYSDSVFVVED 303
Query: 366 --DKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEILIL 415
DK GK ++ +R+G + + V GL+ GE+VV + +N + ++
Sbjct: 304 DKDKKGKVLRQQFVRLGTKRGDFVAVTSGLKEGEQVVSTGVFKLRNGQAAVV 355
>gi|154245006|ref|YP_001415964.1| efflux transporter, RND family, MFP subunit [Xanthobacter
autotrophicus Py2]
gi|154159091|gb|ABS66307.1| efflux transporter, RND family, MFP subunit [Xanthobacter
autotrophicus Py2]
Length = 373
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 117/254 (46%), Gaps = 28/254 (11%)
Query: 164 KLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVL 223
+L DE+ +A L+A D A+I+ R + ++ ++ + AN+++ +
Sbjct: 99 QLRDEQEVANLAALKATADVS------AIILNRDQEQLKIHAVSQATIDSDTANLKKALA 152
Query: 224 LIRERK---ENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYID 280
+ E++ + +++ G LG+ V LGQ VS G + + L+ I+ + + +
Sbjct: 153 QVAEQQAVVDKKTLKAPFSGRLGIRSVDLGQYVSAGTAVVTLQSLNPIFIDFYLPQQALA 212
Query: 281 RVKAG--LAATFERQGGN-FELSVRKVYPEV----RDGKFRTDFVFTGERPDNIR--SGQ 331
VK G + AT + G FE +V + P+V R+ + R +F R D+ R G
Sbjct: 213 EVKTGQTVKATVDTYPGQAFEGTVTAISPKVDVTSRNVQLRAEF-----RNDDHRLTPGM 267
Query: 332 TYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKD-----GKKAYRRKIRIGRQNPQY 386
+ + +G P + +P+ + G+ +FV++K G A + ++ G
Sbjct: 268 FATVEVAVGTPDAFVTVPQTAVTANPYGDIVFVVEKKEGSATGLAARQVFVKTGATRGDQ 327
Query: 387 YEVLEGLEAGERVV 400
VL G++ G+++V
Sbjct: 328 IAVLSGIKEGDQIV 341
>gi|153011541|ref|YP_001372755.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
49188]
gi|151563429|gb|ABS16926.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
49188]
Length = 411
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 12/225 (5%)
Query: 73 VVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA-EKQNLLRNTQ 131
+ ++P+ G ++ V QV+ GD+I +L + + + AEA+LA +KQ L+R
Sbjct: 107 IASIAPKVTGYIENIPVVANQQVKAGDVIFQLDAGDYQIALDEAEAKLATQKQTLIR--- 163
Query: 132 VTMEQDR-----LRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELV 186
+ E D L+ +K +T Q T + +KL++ + +A+ D A+ +
Sbjct: 164 IKAETDAAQAILLQANADKQAATAVLTNAQNTIARVQKLHETRFVAQADLDTAQSSLDQA 223
Query: 187 QQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLN---VRSQIDGELG 243
+ K A ++ + Q + + M+ L + +L+ +R+ DG +G
Sbjct: 224 RAKVAGGDAQVASAKANIEVLNAQYSEADSTMKSLELARDKAARDLSFTSLRAPFDGVIG 283
Query: 244 LLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAA 288
L G VSPGQKI + +++ I+A E + +++ G A
Sbjct: 284 NLAGKKGDLVSPGQKIAALVPVNELYIDANFKETQLAKIRTGETA 328
>gi|118736113|ref|ZP_01584568.1| efflux transporter, RND family, MFP subunit [Dinoroseobacter shibae
DFL 12]
gi|118673858|gb|EAV80424.1| efflux transporter, RND family, MFP subunit [Dinoroseobacter shibae
DFL 12]
Length = 396
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 22/176 (12%)
Query: 250 GQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAAT-FERQGGNFELSVRKVYPEV 308
GQ +S G I +I D++ +IEA + + + G+ G +L +R + P
Sbjct: 200 GQFISVGDPIARIIDINALEIEAQVPSQFAPAIPPGVTVKGVSEAGQQLDLQIRAILP-- 257
Query: 309 RDGKFRTDFVFTGERPDNIRS-----------GQTYYINLQLGQPTESIIIPKGTFFQST 357
T+ V T RP + GQ+ + + + P ++ +PK Q
Sbjct: 258 ------TESVSTRTRPVRLSGDLDALGATLAVGQSITLQVPVSAPRAALAVPKDALVQGA 311
Query: 358 GGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSEIL 413
G W +D DG A R +RIG +EVL GL G+ VV+ E + + L
Sbjct: 312 QG-WTVFVDADGI-AEPRPVRIGVAMGDRFEVLSGLAEGDAVVVRGNERLRPGQAL 365
>gi|94263501|ref|ZP_01287313.1| Secretion protein HlyD [delta proteobacterium MLMS-1]
gi|93456139|gb|EAT06282.1| Secretion protein HlyD [delta proteobacterium MLMS-1]
Length = 402
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/351 (19%), Positives = 146/351 (41%), Gaps = 56/351 (15%)
Query: 58 FNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAE 117
F + R G + LS G ++ G +V GDI+ L++ L
Sbjct: 62 FERWQRYPGSIAAENQAVLSSRITGTIRTMPFRAGDRVAAGDILFTLADEEL-------- 113
Query: 118 AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
+++L +RL ++TE +L++ RRQ R+Q LY + I RE
Sbjct: 114 -----RRDL----------NRLEHETEATAAELELARRQLARREQ--LYAQDAITREALE 156
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
+++ + + +LA R+ ER +R+
Sbjct: 157 ESQA-------------------------RTKTLAASLAANRQARQAAVERLGYTRIRAP 191
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN- 296
G +G L + G SPGQ + ++ + K E ++ ++ + + G + +
Sbjct: 192 FAGVVGRLHALPGDLASPGQPLLELVAVDQLKAEFVVPQNDLAGIGPGAPLRIKVPAADR 251
Query: 297 -FELSVRKVYPEVRD-GK-FRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTF 353
++ ++ +++P+++ G+ R + + E +R G T + + + +++IP
Sbjct: 252 QWDAALDRLHPDLKPPGRGARAETLLPAEAAGFLRPGMTASVEVLVHHRENALMIPVEAL 311
Query: 354 FQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSY 404
+Q G IF+++++ +A RR++ G + + + EGL GE+V+ Y
Sbjct: 312 YQRRGEAHIFIVEEE--RARRRQVLPGPEAAGWVVIEEGLNRGEQVITGGY 360
>gi|53711973|ref|YP_097965.1| putative membrane fusion protein precursor [Bacteroides fragilis
YCH46]
gi|60680173|ref|YP_210317.1| putative HlyD-family efflux transporter component [Bacteroides
fragilis NCTC 9343]
gi|52214838|dbj|BAD47431.1| putative membrane fusion protein precursor [Bacteroides fragilis
YCH46]
gi|60491607|emb|CAH06359.1| putative HlyD-family efflux transporter component [Bacteroides
fragilis NCTC 9343]
Length = 360
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 79/348 (22%), Positives = 136/348 (39%), Gaps = 69/348 (19%)
Query: 58 FNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAE 117
D +++ G + P V LS E G + E +EG V++G ++ ++++ L
Sbjct: 62 LTDQIQISGSLMPDEEVDLSFETSGKIVEINFDEGTTVKKGQLLAKVNDRQL-------- 113
Query: 118 AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
Q +L+ +L+L D R +RQ L + +
Sbjct: 114 ------------------QAQLQRLVAQLKLAED-----RVFRQNALLERDAV------- 143
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
+KE YE Q++ LA + ++ L++ +R+
Sbjct: 144 -SKEAYE-------------------------QVKTELATLNADIDLVKANIAMTELRAP 177
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNF 297
DG +GL V +G SP + ++ + KIE + E Y +VK G FE +G
Sbjct: 178 FDGVIGLRQVSVGSYASPTTIVAKLTKIIPLKIEFSVPERYASQVKKGTNLNFELEGKLS 237
Query: 298 ELSVRKVYPEVR-DGKFRTDFVFTGERPDN--IRSGQTYYINLQLGQPTESIIIPKGTFF 354
+ E R D RT V N I G+ I L+ + +I IP +
Sbjct: 238 SFPAKVYATESRIDQSTRTLTVRALYANSNGAILPGRYASIQLKKEEIPNAIAIPSESIV 297
Query: 355 QSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
G + +F L K G KA +I G + +V++GL+ G+ ++ S
Sbjct: 298 PEMGKDKVF-LYKSG-KAEPVEITAGIRTEAEVQVIKGLQMGDTIITS 343
>gi|15606391|ref|NP_213771.1| cation efflux system (czcB-like) [Aquifex aeolicus VF5]
gi|2983606|gb|AAC07176.1| cation efflux system (czcB-like) [Aquifex aeolicus VF5]
Length = 444
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 206 IQMDQMEDNLANMRRNVLLIRERKENLN-------VRSQIDGELGLLDVVLGQNVSPGQK 258
I++ + E LA + LI+E L VRS +DG + V G + GQ
Sbjct: 215 IEIAKREYKLAKKIGDEKLIKEALRKLRYLKAGSVVRSPVDGVILQKQVYEGGYLKEGQT 274
Query: 259 IGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN--FELSVRKVYPEVRDGKFRTD 316
+I DLS I A + H+ ++ GL A +G + F+ +V ++PEV RT
Sbjct: 275 AYRIADLSTAWIVAEVPLHFSSYIRKGLKAFVSPEGDSTQFQATVDYIFPEVNKLS-RTL 333
Query: 317 FVFTGERPDNIRSGQTYYINLQLGQPT-ESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRR 375
V + +N+ +N+ P E I +P+ + ++FV + G
Sbjct: 334 KVRLKLKNENLTFKPNALVNVSFEVPIGEVIAVPESAVVDTGRRRFVFVEMEKGMYM-PV 392
Query: 376 KIRIGRQNPQYYEVLEGLEAGERVVI 401
++++GR+ YYEV+ GL+ G+RVV+
Sbjct: 393 QVKLGRRGEGYYEVIHGLKEGQRVVV 418
>gi|53711849|ref|YP_097841.1| membrane fusion efflux protein [Bacteroides fragilis YCH46]
gi|52214714|dbj|BAD47307.1| membrane fusion efflux protein [Bacteroides fragilis YCH46]
Length = 366
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/352 (19%), Positives = 151/352 (42%), Gaps = 58/352 (16%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQN 125
G+V+P V + P+ GI+ E E G +++G++I + ++++ +L ++
Sbjct: 53 GKVEPRDEVLIKPQISGIISEVYKEAGQTIKQGEVIAK-------VKVIPELGQLNSAES 105
Query: 126 LLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYEL 185
+R +++ Q + + + +KLY++KLI+RED+ K + E+
Sbjct: 106 RVRVAEISTAQ------------------AETDHERIKKLYNDKLISREDY--EKSEVEI 145
Query: 186 VQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLL 245
+ + ++ +D L ++ + + +RS IDG + +
Sbjct: 146 KKARE----------------ELQTAKDALEIIKEGITKNSASFSSTLIRSTIDGLILDV 189
Query: 246 DVVLGQNV------SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATF---ERQGGN 296
+ +G +V + G I + +++D + IDE + R+ G+ Q
Sbjct: 190 PIKVGNSVIMSNTFNDGTTIATVANMNDLIFKGKIDETEVGRIHEGMPVKLTIGALQNLT 249
Query: 297 FELSVRKVYPE--VRDGKFRTDFVFTGERPDN--IRSGQTYYINLQLGQPTESIIIPKGT 352
F+ + + P+ +G + + PD+ IRSG + + L + + + +P+G
Sbjct: 250 FDAELEYISPKGVEENGANQFEIKAAVHAPDSVQIRSGYSANAEIVLQRAQKVLAVPEGI 309
Query: 353 FFQSTGGNWIFVLDKD--GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
S +++V+ +K RR+I+ G + E+ EGL E+V S
Sbjct: 310 IEFSGDSTFVWVMTDSIPEQKFERRQIKTGMSDGIKLEIKEGLTGKEKVRAS 361
>gi|60680077|ref|YP_210221.1| putative transport/efflux component protein [Bacteroides fragilis
NCTC 9343]
gi|60491511|emb|CAH06263.1| putative transport/efflux component protein [Bacteroides fragilis
NCTC 9343]
Length = 366
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 70/352 (19%), Positives = 151/352 (42%), Gaps = 58/352 (16%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQN 125
G+V+P V + P+ GI+ E E G +++G++I + ++++ +L ++
Sbjct: 53 GKVEPRDEVLIKPQISGIISEVYKEAGQTIKQGEVIAK-------VKVIPELGQLNSAES 105
Query: 126 LLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYEL 185
+R +++ Q + + + +KLY++KLI+RED+ K + E+
Sbjct: 106 RVRVAEISTAQ------------------AETDHERIKKLYNDKLISREDY--EKSEVEI 145
Query: 186 VQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLL 245
+ + ++ +D L ++ + + +RS IDG + +
Sbjct: 146 KKARE----------------ELQTAKDALEIIKEGITKNSASFSSTLIRSTIDGLILDV 189
Query: 246 DVVLGQNV------SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATF---ERQGGN 296
+ +G +V + G I + +++D + IDE + R+ G+ Q
Sbjct: 190 PIKVGNSVIMSNTFNDGTTIATVANMNDLIFKGKIDETEVGRIHEGMPVKLTIGALQNLT 249
Query: 297 FELSVRKVYPE--VRDGKFRTDFVFTGERPDN--IRSGQTYYINLQLGQPTESIIIPKGT 352
F+ + + P+ +G + + PD+ IRSG + + L + + + +P+G
Sbjct: 250 FDAELEYISPKGVEENGANQFEIKAAVHAPDSVQIRSGYSANAEIVLQRAQKVLAVPEGI 309
Query: 353 FFQSTGGNWIFVLDKD--GKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
S +++V+ +K RR+I+ G + E+ EGL E+V S
Sbjct: 310 IEFSGDSTFVWVMTDSIPEQKFERRQIKTGMSDGIKLEIKEGLTGKEKVRAS 361
>gi|71907884|ref|YP_285471.1| Secretion protein HlyD [Dechloromonas aromatica RCB]
gi|71847505|gb|AAZ47001.1| Secretion protein HlyD [Dechloromonas aromatica RCB]
Length = 546
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 194 IERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNV 253
+++L S+ R D E+ + + ++ E K L RS ++G + + G
Sbjct: 205 MKQLADSSLARLKNWDISEEQVKALAKS----GETKRTLTFRSPVNGIVTEKKAIQGMRF 260
Query: 254 SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQG---GNFELSVRKVYPEV-- 308
PG+ + QI DLS + A + E I VK+G A + FE +V VYP +
Sbjct: 261 MPGEALYQIADLSAVWVVAEVFEQDIGLVKSGAKAKVKISAYPDKTFEGAVTYVYPTLTA 320
Query: 309 --RDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLD 366
R R + G ++ G + L + + +P S + V
Sbjct: 321 ATRTVPVRVELANPGAL---LKPGMFAQVELPVSAKGSVVTVPVSAVIDSGTRQIVLVQA 377
Query: 367 KDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISS 403
K+G+ R++++G ++ Y EVL+G++ GE VV+++
Sbjct: 378 KEGRYE-PREVKLGARSDNYVEVLDGVKNGEPVVVAA 413
>gi|89889563|ref|ZP_01201074.1| putative membrane fusion efflux protein, HlyD family [Flavobacteria
bacterium BBFL7]
gi|89517836|gb|EAS20492.1| putative membrane fusion efflux protein, HlyD family [Flavobacteria
bacterium BBFL7]
Length = 423
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 81/391 (20%), Positives = 155/391 (39%), Gaps = 88/391 (22%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G+++P V +SPE G + E + EG V++GD++ R++ L + + A LA
Sbjct: 51 VSATGKIKPEIEVSISPEVPGEIIELPIREGQAVKKGDLLARINPDLLQSSVSRSRAGLA 110
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
N + EQ + + + Y + L+++ +I++ DF A
Sbjct: 111 -------NAKAGFEQAK-----------ASLVEAKANYGRSATLFEKGVISQSDFDAAIA 152
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQ-----MDQMEDNLANMRRNVLLIRERKENLNVRS 236
Y+ + + S Y ++Q +++ DNL ++ +
Sbjct: 153 AYDRAKAS---------ERSAYFTVQSAGATVNEASDNLGRT--------------SIFA 189
Query: 237 QIDGELGLLDVVLGQNVSPGQKIG-----QINDLSDYKIEALIDEHYIDRVKAGLAATFE 291
+ G + LL V LG+ V Q++ ++ DLS ++E ++E+ I ++ G A E
Sbjct: 190 PMTGTISLLAVELGERVVGTQQMAGTELLRVADLSQMEVEVDVNENDIVKIAVGDKAIVE 249
Query: 292 RQG---GNFELSVRKVYPEVRDGKFRTDFV----------------FTGERPDN---IRS 329
FE SV ++ G+ D V T +P+N +
Sbjct: 250 VDAYLKKKFEGSVTEI-ANTATGQLSADQVTNFKVKVRILPESYTDLTEGKPENYSPFKP 308
Query: 330 GQTYYINLQLGQPTESIIIP--------------KGTFFQSTGGNWIFVLDKDGKKAYRR 375
G T +++ + ++I +P + T + + V K G KA R
Sbjct: 309 GMTATVDIITREKNDAIAVPISSIVVKNDTTESKRRTDIELDAEKFECVYVKSGDKAKLR 368
Query: 376 KIRIGRQNPQYYEVLEGLEAGERVVISSYES 406
+ G Q+ + +L GL+ GE ++ Y +
Sbjct: 369 VVTTGIQDDKNIVILTGLKEGEEIITGPYRT 399
>gi|56479465|ref|YP_161054.1| putative HlyD-like secretion protein [Azoarcus sp. EbN1]
gi|56315508|emb|CAI10153.1| putative HlyD-like secretion protein [Azoarcus sp. EbN1]
Length = 386
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 80/362 (22%), Positives = 134/362 (37%), Gaps = 73/362 (20%)
Query: 47 GISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSN 106
G+ VT E D V G ++ V L PE G + EG VRRG++++ L
Sbjct: 60 GVETVTVTSETVADDVTAVGTLRSNESVVLRPEVAGRIAAIRFREGGPVRRGEVLIEL-- 117
Query: 107 SNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLY 166
+A + AE Q Q ++ + Y + + L+
Sbjct: 118 --------DAAVQQAEVQ----------------------QAKANLALAEANYGRTDDLF 147
Query: 167 DEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIR 226
K ++ D+ L R N+ L+
Sbjct: 148 KRKFLSH--------------------------------TARDEAASQLEVARANMALVE 175
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
E +R+ G +G+ +V +G V G + + D++ K++ + E+Y+ RV+ G
Sbjct: 176 AHLERTRIRAPFAGVVGIRNVSIGDYVKEGDDLVNLEDIATLKVDFRLPENYLARVRPGQ 235
Query: 287 AATFERQG---GNFELSVRKVYPEVRDGKFRTDFVFTGERPDN---IRSGQTYYINLQLG 340
FE V + P V D + R+ V P+ +R G + L L
Sbjct: 236 TLEITSDAIPEQRFEARVAAIDPLV-DEQGRS-VVMRATLPNEGLRLRPGMFARVRLILQ 293
Query: 341 QPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
Q ++ I+P+ S GN FV KA R ++ G + EV+ GL+AG+ VV
Sbjct: 294 QRSDVAILPEEALV-SAPGNVQFVYRVVDGKAQRVEVSTGIRRGTRVEVVRGLQAGDVVV 352
Query: 401 IS 402
+
Sbjct: 353 TA 354
>gi|21674170|ref|NP_662235.1| membrane fusion efflux protein, putative [Chlorobium tepidum TLS]
gi|21647331|gb|AAM72577.1| membrane fusion efflux protein, putative [Chlorobium tepidum TLS]
Length = 422
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 94/434 (21%), Positives = 173/434 (39%), Gaps = 91/434 (20%)
Query: 18 YIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLS 77
+I+GG F + V +I+ N R A ++ V ++ V G++QP T V +S
Sbjct: 14 FIIGGALFAIGVAALIWLN----TREKAVEVTTEKVFRKEVVHTVTATGKIQPETEVAMS 69
Query: 78 PEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQD 137
P+ G + E V EG +V+ G ++ R+ Q+ + A+L NL
Sbjct: 70 PDVSGEIIELPVVEGQEVKAGQLLFRIQPDIYVNQVKQSRAQL----NL----------- 114
Query: 138 RLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERL 197
+K + ++ + + + +R+ + LY +KLI++ D+L AK + E + +
Sbjct: 115 ---SKAQSMEAKARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETSRAAWKAARYSI 171
Query: 198 HQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLL-----DVVLGQN 252
Q+ +DQ E ER VRS I+G + L + V+G
Sbjct: 172 DQNQSL----LDQNE--------------ERLTKTVVRSPINGTIISLSSKPGERVVGTG 213
Query: 253 VSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEVRD-- 310
PG ++ +I +L + ++ ++E+ I V+ G T R EV +
Sbjct: 214 QFPGTEVLKIANLDNMLLKVEVNENDIVNVQVGNPVTVTVDA----FGDRTFKGEVSEIA 269
Query: 311 GKFRTDFVFTGERPDN-------------IRSGQTYYINLQLGQPTESIIIP-------- 349
+T T E N ++ G + N++ + ++++P
Sbjct: 270 NSAKTQAANTQEEATNFEVKIKILNHQRLLKPGMSGTANIETQRVPNALVVPIQSVTMRT 329
Query: 350 -----KGTFFQSTGGNWIFVLDK--------------DGKKAYRRKIRIGRQNPQYYEVL 390
T ST N + L++ +G RK++ G + + +L
Sbjct: 330 AGGKKAATPTDSTSNNKVVQLNQNHRLTDETEGVFVVEGDHVRFRKVKTGTTDNTHIIIL 389
Query: 391 EGLEAGERVVISSY 404
EG++ GE VV SY
Sbjct: 390 EGVKEGEEVVSGSY 403
>gi|120586939|ref|YP_961284.1| secretion protein HlyD family protein [Desulfovibrio vulgaris
subsp. vulgaris DP4]
gi|120564353|gb|ABM30096.1| secretion protein HlyD family protein [Desulfovibrio vulgaris
subsp. vulgaris DP4]
Length = 353
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 49 SIGHVTHEQFNDFVRVDGQVQPITV-VQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNS 107
S E+ +V G V+P+T + L E G++ V EG +V +G + RL N
Sbjct: 36 SAAATMEERTKGWVVASGIVEPVTKELVLGFETSGVIDTVFVAEGDKVEKGQPLARLRNG 95
Query: 108 NLDLQILNAEAE-LAEKQNLLRNTQVT--------MEQDRLRNKTEKLQLDLDITRRQRT 158
Q+ A+A LA + + T + + Q+R K + D + TRRQR
Sbjct: 96 MEKAQLEEAQANALAARMEFEKLTNGSRPEEKGEALAQERRAFKVYEQYRD-EATRRQRL 154
Query: 159 YRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQ-DSIYRSIQMDQMEDNLAN 217
++Q I+RED +A+ D ++ +Q++ ++L + +YR + + LA
Sbjct: 155 WQQDA-------ISREDLERAQRDMDVARQEYVAATQQLKLVEDMYRREDVAKAGYQLAA 207
Query: 218 MRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQ--------KIGQINDLSDYK 269
V + R E + +R+ + G VL + PG+ + + D+S
Sbjct: 208 ADSAVGVARAALERMELRAPVSG------TVLRVHGEPGEVFSLFAPSPVISVGDISALN 261
Query: 270 IEALIDEHYIDRVKAGLAA 288
+ A +DE I R++ G A
Sbjct: 262 VRAEVDERDIGRIRVGQVA 280
>gi|114320545|ref|YP_742228.1| efflux transporter, RND family, MFP subunit [Alkalilimnicola
ehrlichei MLHE-1]
gi|114226939|gb|ABI56738.1| efflux transporter, RND family, MFP subunit [Alkalilimnicola
ehrlichei MLHE-1]
Length = 502
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 234 VRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFE-- 291
V++ DG + L+V G V PG ++ I DLS + A + EH D V+ GL A
Sbjct: 207 VKAPQDGVVQALNVAEGMFVQPGTEVMSIADLSRIWVIADLFEHQSDAVREGLDAEVHFP 266
Query: 292 -RQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDN-IRSGQTYYINLQLGQPTESII-I 348
R G SV +YP + T + PD ++ G +++ G+ TE ++ +
Sbjct: 267 FRPGETLVGSVGYIYPTLASPTRTIRARITLDNPDGRLKPGMWTDVHID-GESTEPVLHV 325
Query: 349 PKGTFFQSTGGNWIFVLDKDGKKAYR-RKIRIGRQNPQYYEVLEGLEAGERVVIS 402
P ++ + + ++++G+ +R ++R+GR+ E+LEGL+ G R+V S
Sbjct: 326 PAEAVIRTGRQDRVVTMEEEGR--FRVHEVRVGRRAGDRLEILEGLQVGARIVTS 378
>gi|89896572|ref|YP_520059.1| hypothetical protein DSY3826 [Desulfitobacterium hafniense Y51]
gi|89336020|dbj|BAE85615.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 396
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 86/395 (21%), Positives = 164/395 (41%), Gaps = 41/395 (10%)
Query: 23 IAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGG 82
+ F+LLVG +I + + + +S V + F V G+++ + + +
Sbjct: 10 VVFILLVGVLI-ASQVLSRQAGLIPVSAAEVVQDDFEQNVFASGKLEVKDLAEFKADTKT 68
Query: 83 IVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNK 142
VQE V+ G +V +G II+ + S+L +AEA +Q +E LR K
Sbjct: 69 TVQEIPVKAGDKVSKGQIILVMDTSSL-----SAEA-----------SQKDLECKELRAK 112
Query: 143 TEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSI 202
+ + +I Q+ Y +K Y+ + E + ++ E QK + E +
Sbjct: 113 I--INSESNIRLFQQAYDTAQKDYNNTKVLMESGAASLKELEQAGQK---VTEAQENLVV 167
Query: 203 YRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQI 262
+ + ++ L +E+ + + S DG + L V GQ V G + QI
Sbjct: 168 EQEANLPLLKAQLEQAEVLYQKAQEKLQKATIHSPYDGTVLNLAVKAGQEVENGTLLAQI 227
Query: 263 NDLSDYKIEALIDEHYIDRVKAG--------------LAATFERQGGNFELSVRKVYPEV 308
+ + IE I+E +K G L + E E+ V E
Sbjct: 228 GNPAQLLIETGINEVDAALLKVGDQVEITNSALLKEPLLGSIETIAPTAEV-VATSQGEQ 286
Query: 309 RDGKFRTDFVFT-GERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDK 367
K R T GE P ++ G + + L Q +++++P + G ++V+ +
Sbjct: 287 TQVKIRISVPATEGESP--LKPGFNVNLKVILQQKEQALLVPLEAVIEGEGQKLVYVVGQ 344
Query: 368 DGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
DG + ++++ G N + E++ GL+ GE+V+++
Sbjct: 345 DGIVS-EKEVQTGLSNELFMEIVAGLQVGEKVILN 378
>gi|123441539|ref|YP_001005525.1| putative HlyD family secretion protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122088500|emb|CAL11293.1| putative HlyD family secretion protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 402
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 81/368 (22%), Positives = 154/368 (41%), Gaps = 64/368 (17%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V DG ++ V + + G ++ V G QV +G ++ + + L + L
Sbjct: 52 VLADGTIKAQKQVTVGAQVSGQIKALHVTLGQQVEKGQLVAEIDD-------LTQQNALK 104
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKE 181
+ + L+N + Q + T+K Q TY++Q+++ + L R DF AK
Sbjct: 105 DAEEALKNV---LAQRAAKEATQK--------NNQLTYQRQQQILAKGLGVRADFDSAKA 153
Query: 182 DYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGE 241
+ Q + I+ L Q+ Q E ++ + N+ + + S I+G
Sbjct: 154 TLDSTQAE----IKAL-------DAQIAQAEIAVSTAKLNLGYTK-------ITSPINGT 195
Query: 242 LGLLDVVLGQNVSPGQK---IGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGG--- 295
+ + V GQ V+ Q I ++ L +EA I E + +VKAG+ F G
Sbjct: 196 VVAIPVEEGQTVNAVQSAPTIIKVAQLDTMTVEAQISEADVVKVKAGMPVYFTILGEPEE 255
Query: 296 NFELSVRKVYP---EVRD-----------------GKFRTDFVFTGERPDN-IRSGQTYY 334
F ++R + P + D + +F P+ +R T
Sbjct: 256 RFSATLRAIEPAPDSINDETTTTSSSSSSSSSSTTTAIYYNGLFDVANPNGALRISMTAQ 315
Query: 335 INLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLE 394
+ + L + ++++IP + G + V+D +GK + R++ +G N ++L GL+
Sbjct: 316 VYIVLHKAEDAVVIPATALENNNGRYRVQVVDSNGKVS-TREVTVGLNNNVDAQILSGLQ 374
Query: 395 AGERVVIS 402
AGE+V++S
Sbjct: 375 AGEQVIVS 382
>gi|118745393|ref|ZP_01593368.1| secretion protein HlyD [Geobacter lovleyi SZ]
gi|118681679|gb|EAV88102.1| secretion protein HlyD [Geobacter lovleyi SZ]
Length = 368
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 14/230 (6%)
Query: 64 VDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEK 123
++ + P+T P G V +V + V++GD++V L ++ + + AEAEL
Sbjct: 66 IEAHIHPVT-----PRVDGTVTTVLVRDNQLVKKGDLLVMLDANDYRVAVDKAEAELGIA 120
Query: 124 QNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDY 183
+N ++ + R ++ ++Q D + + ++ L+ +++I RE + +
Sbjct: 121 RNETSGDRLQVAASRAAVQSARIQRD----QAELDLKRGTALFGKEVIPREQLDRLQTAQ 176
Query: 184 ELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENL---NVRSQIDG 240
+L + + E L +D I + N A +R+ + E + L + + +DG
Sbjct: 177 QLSEARLKQAEESLKKDQAIAGISGEST--NKARIRKQQAALEENRLKLGYTRIVAPVDG 234
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATF 290
+ V +G V PGQ + + LS+ I A E + +K G TF
Sbjct: 235 YITRKGVEVGATVQPGQALMAVVPLSNTWITANYKESQLTHIKPGQQVTF 284
>gi|56385100|gb|AAV85981.1| MacA [Neisseria gonorrhoeae]
Length = 392
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 60/372 (16%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G++ P +V + + G +++ V+ G QV++GD+I + NS LN
Sbjct: 47 VSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEI-NSTTQTNTLN------ 99
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKL-QLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
ME+ +L KL + + ++ Y++Q L+ + ++ED L++
Sbjct: 100 ------------MEKSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKED-LESA 146
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
+D + + ++ L + S I ++ E +L R + + +DG
Sbjct: 147 QDALAAAKANVAELKALIRQS---KISINTAESDLGYTR--------------ITATMDG 189
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKI---EALIDEHYIDRVKAGLAATF---ERQG 294
+ + V GQ V+ Q I L++ + + I E I +VKAG +F
Sbjct: 190 TVVAIPVEEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGDITKVKAGQDISFTILSEPD 249
Query: 295 GNFELSVRKVYP---EVRDGKFRT------DFVFTGER-----PD-NIRSGQTYYINLQL 339
+ + V P + G + + + V+ R PD + +G T +++
Sbjct: 250 TPIKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVPNPDGKLATGMTTQNTVEI 309
Query: 340 GQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERV 399
++IP T G ++ VL DGK A R+IR G ++ EV GL+ G++V
Sbjct: 310 DGVKNVLLIPSLTVKNRGGKAFVRVLGADGKAA-EREIRTGMRDSMNTEVKSGLKEGDKV 368
Query: 400 VISSYESYKNSE 411
VIS + + E
Sbjct: 369 VISEITAAEQQE 380
>gi|78047988|ref|YP_364163.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78036418|emb|CAJ24109.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 370
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 78/358 (21%), Positives = 140/358 (39%), Gaps = 79/358 (22%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQN 125
G+V P+ V Q+ G+V + EEG+ VR G ++ ++ + + + A EL
Sbjct: 56 GRVSPMRVAQVRARVAGVVLARRFEEGSDVRAGQVLFQIDPAPFEAAVARARGELRRSDA 115
Query: 126 LLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYEL 185
L N E + ++L ++I+R+DF A+ +++
Sbjct: 116 ELENAAAQFE-------------------------RSQQLVQRQVISRQDFDTARSNFKS 150
Query: 186 VQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLL 245
Q A L ++ Q+E A VR+ IDG +G
Sbjct: 151 TQAAVASARAAL---------KIAQLELGFA----------------TVRAPIDGRIGR- 184
Query: 246 DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYID---RVKAGLAATFERQGGNFELSVR 302
V+ G +GQ + ++ + +D + D V L + G L V
Sbjct: 185 -----ALVTEGALVGQGGEATEMALIQQLDPIFADFNRPVAEALKLRGRARKGEAPLKVV 239
Query: 303 KVYPEVRDGKFRTDFVFTGERPD------NIRSGQTYYINLQL-----------GQPTES 345
PE+ + + D +F R D ++R+ NL L G +++
Sbjct: 240 IDIPELGETR-EGDLLFADMRVDETTDTVSLRAQFDNRDNLLLPGMFVRVRTPNGTASDA 298
Query: 346 IIIPKGTFFQSTGGN-WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+ +P+ + GG+ + V+ DG +A R +R G +++LEGL+AGER + S
Sbjct: 299 VYVPQRAIQRRPGGSAAVMVVGADG-RAELRDVRTGAMVGTDWQILEGLKAGERYIAS 355
>gi|56460331|ref|YP_155612.1| Membrane-fusion protein, RND-like efflux system component
[Idiomarina loihiensis L2TR]
gi|56179341|gb|AAV82063.1| Membrane-fusion protein, RND-like efflux system component
[Idiomarina loihiensis L2TR]
Length = 509
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 28/247 (11%)
Query: 184 ELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKEN------LNVRSQ 237
E+V + L++ + + +D E+ L ++ + I++ KE + V+++
Sbjct: 159 EMVNAQEELVLASQRGNQVL----IDAAEERLRALQVSESEIKKLKETHKIQKTITVKAK 214
Query: 238 IDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQ---G 294
G L L V G V P + I L + A + E +++V+ G + + G
Sbjct: 215 QSGVLDKLTVREGAFVKPSMNLMTIAQLDKIWVIAEVFERQLNQVEVGNKVQMDLEYAPG 274
Query: 295 GNFELSVRKVYP----EVRDGKFRTDFVFTGERPDN-IRSGQTYYINLQLGQPTESIIIP 349
++E V VYP + R G+ R F PD ++ G +N+ G ES+IIP
Sbjct: 275 KDWEGKVDYVYPSLNPKTRTGQVRIHF----NNPDAFLKPGMFANLNINAGLGDESLIIP 330
Query: 350 KGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSY----- 404
K + G N + + DGK + +GR E+L GL AG+ +V S+
Sbjct: 331 KEALIRMGGSNRVVLALGDGKFK-SVNVDVGRLGSSRVEILSGLMAGDEIVTSAQFLIDS 389
Query: 405 ESYKNSE 411
ES K+S+
Sbjct: 390 ESSKSSD 396
>gi|77166387|ref|YP_344912.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
gi|76884701|gb|ABA59382.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
Length = 418
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 30/281 (10%)
Query: 84 VQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKT 143
VQE VEEG V RG ++V+L + L+ L +A+L E + + + +V D K
Sbjct: 82 VQEVKVEEGELVGRGQLLVQLDEQEVKLEWLQRQADLKEIEAFIASEKVRHAHDLKALKH 141
Query: 144 EKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIY 203
EK L L +R + E L KL R +A++ + AL +
Sbjct: 142 EKSLLALS----RRAVERAETLEQRKLTPRSVLDEARQ----AAGRQALELNN------- 186
Query: 204 RSIQMDQMEDNLANMR----RNVLLIRERK---ENLNVRSQIDGELGLLDVVLGQNVSPG 256
R + +D + LA ++ R L+ + K E + S G + + + G V G
Sbjct: 187 RLLAIDDHQARLAQLKARQLRAQALLDQAKLDLERTRITSPYTGRIASVAIATGDRVQAG 246
Query: 257 QKIGQINDLSDYKIEALIDEHYIDRVKAGLA------ATFERQGGNFELSVRKVYPEVRD 310
++ QI D ++ A I Y +++ LA A + G F S+ ++ V
Sbjct: 247 DELLQIYDTDALEVRAQIPSSYAGQIRKALAQNVSLRAAAKVDGSGFLFSLDRLAGRVEK 306
Query: 311 GKFRTDFVFTGERPDN--IRSGQTYYINLQLGQPTESIIIP 349
G D + E+P++ + G + LQL + +++P
Sbjct: 307 GSGGVDALLKLEKPEHAALPLGNFVELRLQLPLAEDVVMLP 347
>gi|109647205|ref|ZP_01371109.1| efflux transporter, RND family, MFP subunit [Desulfitobacterium
hafniense DCB-2]
gi|109642451|gb|EAT52005.1| efflux transporter, RND family, MFP subunit [Desulfitobacterium
hafniense DCB-2]
Length = 413
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 88/412 (21%), Positives = 169/412 (41%), Gaps = 75/412 (18%)
Query: 23 IAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGG 82
+ F+LLVG +I + + + +S V + F V G+++ + + +
Sbjct: 27 VVFILLVGVLI-ASQVLSRQAGLIPVSAAEVVQDDFEQNVFASGKLEVKDLAEFKADTKT 85
Query: 83 IVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNK 142
VQE V+ G +V +G II+ + S+L ++ +Q +E LR K
Sbjct: 86 TVQEIPVKAGDKVSKGQIILVMDTSSLSVEA----------------SQKDLECKELRVK 129
Query: 143 TEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSI 202
+ + +I Q+ Y +K Y+ + E + ++ E QK E L
Sbjct: 130 I--INSESNIRLFQQAYDTAQKDYNNTKVLMESGAASLKELEQAGQKVTEAQENL----- 182
Query: 203 YRSIQMDQMEDNL----ANMRRNVLLIRERKENLN---VRSQIDGELGLLDVVLGQNVSP 255
+ + E NL A +++ +L ++ +E L + S DG + L V GQ V
Sbjct: 183 -----VVEQEANLPLLKAQLKQAEVLYQKAQEKLQKATIHSPYDGTVLNLAVKAGQEVEN 237
Query: 256 GQKIGQINDLSDYKIEALIDEHYIDRVKAG---------------------LAATFE--- 291
G + QI + + IE I+E +K G +A T E
Sbjct: 238 GTLLAQIGNPAQLLIETGINEVDAALLKVGDQVEITNSALLKEPLLGSIETIAPTAEVVA 297
Query: 292 -RQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPK 350
QG ++ +R P GE P ++ G + + L Q +++++P
Sbjct: 298 TSQGEQTQVKIRISVPATE-----------GESP--LKPGFNVNLKVILQQKEQALLVPL 344
Query: 351 GTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
+ G ++V+ +DG + ++++ G N + E++ GL+ GE+V+++
Sbjct: 345 EAVIEGEGQKLVYVVGQDGIVS-EKEVQTGLSNELFMEIVAGLQVGEKVILN 395
>gi|126665363|ref|ZP_01736345.1| AcrA/AcrE family protein [Marinobacter sp. ELB17]
gi|126629991|gb|EBA00607.1| AcrA/AcrE family protein [Marinobacter sp. ELB17]
Length = 363
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 19/275 (6%)
Query: 146 LQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKED-----YELVQQKHALIIERLHQD 200
LQL D+ R +L D + AR QA D +Q+ A I E +H+
Sbjct: 76 LQLPFDVDDSVRPGDLIVQLEDSEQRARVSQTQAAVDEARAALSDAKQRFARI-ESVHKR 134
Query: 201 SIYRSIQMDQMEDNLANMRRN-------VLLIRERKENLNVRSQIDGELGLLDVVLGQNV 253
+ + DQ +NLA + ++ RE+ + + G L V +G++V
Sbjct: 135 GLVSGQEFDQARNNLAGAQARAERADAGMVEAREQLSYTRIEAPYGGILTERHVEVGESV 194
Query: 254 SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGN-FELSVRKVYP--EVRD 310
SPGQ + L ++ + + Y +A AT G + YP +
Sbjct: 195 SPGQALLSGLSLEQLRVVVDLPQRYAASARAERQATVTLADGRVLKTGEMTFYPYANAKT 254
Query: 311 GKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGK 370
FR T E ++ G + + + + +E++++P + Q + ++V+D DGK
Sbjct: 255 HTFRLRMALT-EPNGSLFPGMLVKVEVPVSR-SETLLVPASSLVQHSELRAVYVIDSDGK 312
Query: 371 KAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYE 405
R ++R G+ E+L G+ AGE+VV+++ E
Sbjct: 313 PRLR-QVRTGKIADNQIEILAGVSAGEQVVLNATE 346
>gi|59801782|ref|YP_208494.1| putative ABC transporter, periplasmic protein [Neisseria
gonorrhoeae FA 1090]
gi|59718677|gb|AAW90082.1| putative ABC transporter, periplasmic protein [Neisseria
gonorrhoeae FA 1090]
Length = 392
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 82/372 (22%), Positives = 156/372 (41%), Gaps = 60/372 (16%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V G++ P +V + + G +++ V+ G QV++GD+I A
Sbjct: 47 VSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLI-------------------A 87
Query: 122 EKQNLLRNTQVTMEQDRLRNKTEKL-QLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAK 180
E + + + ME+ +L KL + + ++ Y++Q L+ + ++ED L++
Sbjct: 88 EINSTTQTNTIDMEKSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKED-LESA 146
Query: 181 EDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDG 240
+D + + ++ L + S I ++ E +L R + + +DG
Sbjct: 147 QDALAAAKANVAELKALIRQS---KISINTAESDLGYTR--------------ITATMDG 189
Query: 241 ELGLLDVVLGQNVSPGQKIGQINDLSDYKI---EALIDEHYIDRVKAGLAATF---ERQG 294
+ + V GQ V+ Q I L++ + + I E I +VKAG +F
Sbjct: 190 TVVAIPVEEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGDITKVKAGQDISFTILSEPD 249
Query: 295 GNFELSVRKVYP---EVRDGKFRT------DFVFTGER-----PD-NIRSGQTYYINLQL 339
+ + V P + G + + + V+ R PD + +G T +++
Sbjct: 250 TPIKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVPNPDGKLATGMTTQNTVEI 309
Query: 340 GQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERV 399
++IP T G ++ VL DGK A R+IR G ++ EV GL+ G++V
Sbjct: 310 DGVKNVLLIPSLTVKNRGGKAFVRVLGADGK-AVEREIRTGMKDSMNTEVKSGLKEGDKV 368
Query: 400 VISSYESYKNSE 411
VIS + + E
Sbjct: 369 VISEITAAEQQE 380
>gi|84394500|ref|ZP_00993211.1| membrane-fusion protein [Vibrio splendidus 12B01]
gi|84374877|gb|EAP91813.1| membrane-fusion protein [Vibrio splendidus 12B01]
Length = 368
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 209 DQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDY 268
D+ E N ++ ++ ++ E +R+ DG++G+ +V LGQ + G I ++ D S
Sbjct: 141 DEAEANYYSLSADIESLKASIERREIRAPFDGKVGIRNVYLGQYLQSGTDIVRLEDTSVM 200
Query: 269 KIEALIDEHYIDRVKAGLAATFERQG---GNFELSVRKVYPEV--RDGKFRTDFVFTGER 323
++ + + I R+ G A FE S+ + P V + G + +
Sbjct: 201 RLRFTVSQTDISRINVGQAIDIFVDAYPEKPFEGSISAIEPAVSIQSGLIQVQ----ADI 256
Query: 324 PDN---IRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVL-DKDG-KKAYRRKIR 378
P+N +RSG N+ L + + +P+ + G+ +++L ++DG ++ + ++
Sbjct: 257 PNNDGKLRSGMFARANIILPKLENQVTLPQTAITFTLYGDNVYILTEEDGVQRVAQHVVK 316
Query: 379 IGRQNPQYYEVLEGLEAGERVVIS 402
+G + + +LEG++AG+ VV S
Sbjct: 317 VGERTAEIAHILEGVKAGDTVVTS 340
>gi|15605827|ref|NP_213204.1| hypothetical protein aq_294 [Aquifex aeolicus VF5]
gi|2982989|gb|AAC06602.1| putative protein [Aquifex aeolicus VF5]
Length = 371
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 83/363 (22%), Positives = 162/363 (44%), Gaps = 39/363 (10%)
Query: 53 VTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQ 112
V E+ V G V+ + V++ + G V E + G +V++G+ + R+ N L+ +
Sbjct: 32 VKKEKVEKTVYATGYVKALNEVEVKAKVAGYVSEVYKDVGQKVKKGEPLARIQNKPLEEK 91
Query: 113 ILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIA 172
+ E +L + +R + L+ K + ++ + +R +++LY+++LI+
Sbjct: 92 VKILEIQLQNLKEKIREDSPFIRAYELKIKALREEVKELEEKLKR----RKRLYEKELIS 147
Query: 173 REDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENL 232
KE+YE +++K+ +E L ++++ + ++ N+ +E
Sbjct: 148 -------KEEYESLKRKYRAKLESLKALESEFKESVEEVRRKIREVKANLEKAKEELGEY 200
Query: 233 NVRSQIDGELGLLDVVLGQNVSPGQKIGQ---------INDLSDYKIEALIDEHYIDRVK 283
VRS IDG V+L +NV G+ + + + K +DE Y VK
Sbjct: 201 TVRSPIDG------VILKKNVEVGEYVNTFMETKPLFVVGNTEKLKTYLEVDEEYSSLVK 254
Query: 284 AGLAATFERQGGN---FELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQTY--YINLQ 338
G + F+ + KV+ +V + K + + + G T YI +
Sbjct: 255 KGQEVYVSVESLKDKLFKGKIVKVHKKVDEKKKVFLVEAEVDYSEKVLPGTTVEGYIVVY 314
Query: 339 LGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGER 398
G E+++IP+ + GN + +L K+GK + I++G EVLEGL+ G+R
Sbjct: 315 RG---EALLIPEKAILE---GNRVKIL-KNGK-IIDKTIKLGETYGDKVEVLEGLKEGDR 366
Query: 399 VVI 401
+VI
Sbjct: 367 IVI 369
>gi|113933101|ref|ZP_01419003.1| Secretion protein HlyD [Caulobacter sp. K31]
gi|113733322|gb|EAU14390.1| Secretion protein HlyD [Caulobacter sp. K31]
Length = 407
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 28/241 (11%)
Query: 162 QEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRN 221
+++L+D K+ AR+D A+ + + + + + R+ AN R
Sbjct: 171 EKRLFDAKITARQDLESAQAEVAIAESE------------LRRASSASAAAGVSANGRY- 217
Query: 222 VLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDR 281
+ V S I G + VLG V G ++ +I D + +I+A + R
Sbjct: 218 ----------ITVASPISGRITAAPAVLGSYVIAGAELFRIADPARLEIQASLPSADAAR 267
Query: 282 VKAGLAATFERQGGNFELSVRKVYPEVRDGKFRTDFVFT-GERPDNIRSGQTYYINL--Q 338
+K G A E G+ SVR V P V V T + GQ + + +
Sbjct: 268 IKPGDQAIVETAQGSVPASVRSVTPGVDVASRAATAVLTLAPGQTQLAPGQAVRVRITPR 327
Query: 339 LGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGER 398
+E +P+ G + +FV KDG +A R +++GR+ E+L G+ AGE+
Sbjct: 328 GAASSERFSVPEEAVQAVEGADTVFVRTKDGFEA--RAVKVGRRGGGRIEILSGVAAGEQ 385
Query: 399 V 399
+
Sbjct: 386 I 386
>gi|119947305|ref|YP_944985.1| efflux transporter, RND family, MFP subunit [Psychromonas
ingrahamii 37]
gi|119865909|gb|ABM05386.1| efflux transporter, RND family, MFP subunit [Psychromonas
ingrahamii 37]
Length = 383
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 96/405 (23%), Positives = 162/405 (40%), Gaps = 58/405 (14%)
Query: 13 KKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPIT 72
KKH I+ + + + +++ + + V + ++ G V N G ++
Sbjct: 3 KKHRLLIITMLIIVAIAVLIVYLKRSRPIAVVVQEVTKGEVLATITNTRA---GTLKACQ 59
Query: 73 VVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQV 132
+LSP GG ++ +V+EG V+ G +++ + N +L Q+ AE E L+R +
Sbjct: 60 RARLSPSIGGQIESLLVKEGDLVKSGQLLLEIWNDDLQAQVTLAEYESEISAALVREACI 119
Query: 133 TMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHAL 192
D+ +R+ YR + L+ + +++ E QA E
Sbjct: 120 IG----------------DLAKRE-AYRLR-TLFKKNMVSAESVDQA----ESAANAKLA 157
Query: 193 IIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVR-SQIDGELG--LLDVVL 249
E H ++D LA R N N R ++++GE+G L +
Sbjct: 158 ACEAAHTSVKVSQSKIDATRAALARTRLNA--------PFNGRVAEVNGEVGEYLTPSPI 209
Query: 250 GQNVSPGQKIGQINDLSDYK---IEALIDEHYIDRVKAGLAATFERQ---GGNFELSVRK 303
G P DL DY + A IDE +++ + A G F VR+
Sbjct: 210 GVATLPAI------DLIDYSCLYVSAPIDEVDAPQIRPKMPARVSLDAFAGKTFAGRVRR 263
Query: 304 VYPEVRDGKFRTDFV------FTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQST 357
V V D + ++ V + N+ G + + L Q + IP F
Sbjct: 264 VADYVLDLEKQSRTVEIEVEFINLDNIGNMLPGYSADAEVILDQRDNVLRIPTAALFDR- 322
Query: 358 GGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVIS 402
N + +L +DG +RKI+IG N Y EVL+GL AGE +V S
Sbjct: 323 --NQVLILKEDGLLE-QRKIKIGISNWHYTEVLDGLAAGELLVTS 364
>gi|77165025|ref|YP_343550.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
gi|76883339|gb|ABA58020.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
Length = 625
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 78/312 (25%), Positives = 138/312 (44%), Gaps = 42/312 (13%)
Query: 112 QILNAEAELAEKQNLLRNT----QVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYD 167
Q++ E A+ +L R QV+ ++ RL + + L+ D + Y D
Sbjct: 317 QLIGVETARAQVTDLERTIRAVGQVSYDETRLGDVS--LKFDAWVGELYAEYVGAPVKKD 374
Query: 168 EKL--IAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQM-DQMEDNLANMRRNVLL 224
+ L + + L A+++Y ++Q+ A D+ + +++ D +A + R
Sbjct: 375 QPLFTVYGPELLAAQQEYLTLRQRSA---SSTLLDAARKRLELWDMTNGEIAALAR---- 427
Query: 225 IRERKENLN---VRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDR 281
R E+L+ + + + G + + +VV G G+ + +I DLS +EA + E +
Sbjct: 428 ---RGESLDYVPIHAPLGGTVVMKNVVEGTARQAGETLMRIADLSRVWVEAEVYEAELPL 484
Query: 282 VKAGLAATFE---RQGGNFELSVRKVYPEVRDGKFRTDFV-FTGERPDNIRSGQTYY--- 334
V+AG++A F+ + VYP + DG RT V T E PD + + Y
Sbjct: 485 VRAGMSAEVHLPYLPNQVFQGDIDYVYPYL-DGDSRTGRVRITLENPDGVLKPEMYAEVK 543
Query: 335 INLQLGQ----PTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVL 390
+ LGQ P E++II G I D G + R++ G++ E+L
Sbjct: 544 LKADLGQRLTVPEEAVII--------AGETRIVFEDLGGGRLAPRRVETGQRAGGRIEIL 595
Query: 391 EGLEAGERVVIS 402
GLE G++VV S
Sbjct: 596 SGLEPGDQVVTS 607
>gi|39933175|ref|NP_945451.1| putative multidrug efflux membrane fusion protein [Rhodopseudomonas
palustris CGA009]
gi|39652800|emb|CAE25539.1| putative multidrug efflux membrane fusion protein [Rhodopseudomonas
palustris CGA009]
Length = 381
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 81/381 (21%), Positives = 146/381 (38%), Gaps = 78/381 (20%)
Query: 49 SIGHVTH--EQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSN 106
++G +T + + ++G++Q I V L+ +QE++ EGA+V++GD++ RL
Sbjct: 32 AVGTITARPQAITETTEINGRIQAIGRVDLTARVNAYLQEQLFVEGAEVKKGDLLFRL-- 89
Query: 107 SNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLY 166
EQ E + +D + Q Y
Sbjct: 90 ----------------------------EQPPFEADAEAKRAAVDQAQAQLDYADLALGR 121
Query: 167 DEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIR 226
E+L+ Q+ D Q+ A R Q Q+ Q E NL
Sbjct: 122 AEQLLKTSSGSQSTADNARAAQRTAAAQLRSAQ------AQLRQSEINLGYTE------- 168
Query: 227 ERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGL 286
+RS IDG +G + V LG V P G + + ++ ++R+ L
Sbjct: 169 -------IRSPIDGRIGRIQVTLGNVVGPSS--GALATVVSQDPAYVVFPISVNRLLQ-L 218
Query: 287 AATFERQGGNFELSVRKVYPEVR----DGKFRTDFVFTGERPDNI--------------- 327
F QGG + +R P+ R GK + V D+I
Sbjct: 219 REEFAAQGGLEAMKIRLRLPDGRLYREVGKLQFVDVAVARDTDSIILRGTIANPPLAGGG 278
Query: 328 ---RSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNP 384
+ + L+ +P E + IP+ G++++V+ D A RR++++G+
Sbjct: 279 RELTHDEMVRVLLEGSKPREVLAIPRAAILTDQQGDYVYVV-SDKNVAERRRVKLGQSTA 337
Query: 385 QYYEVLEGLEAGERVVISSYE 405
Q V++GL+AG++V++ +
Sbjct: 338 QIASVIDGLKAGDQVIVEGVQ 358
>gi|146298924|ref|YP_001193515.1| secretion protein HlyD family protein [Flavobacterium johnsoniae
UW101]
gi|146153342|gb|ABQ04196.1| secretion protein HlyD family protein [Flavobacterium johnsoniae
UW101]
Length = 379
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 33/258 (12%)
Query: 70 PITVVQLSPEEGGIVQEKV-----------------VEEGAQVRRGDIIVRLSNSNL--- 109
PI V +S + GI++ K ++ A V++GD ++++S NL
Sbjct: 41 PIIKVDISSQSRGIIRGKAENVPVSTIVNGRISWIFLKNNAFVKKGDTLLKISKENLESD 100
Query: 110 ----DLQILNAEAELAEKQNLLRNTQV-----TMEQDRLRNKTEKLQLDLDITRRQRTYR 160
D +++ A L + NLL+N T +D + ++ K +L I++ + Y
Sbjct: 101 KRTQDTLLVSVLALLRDISNLLQNKTTHLQTSTAREDLFKFQSGKNELQSKISQAKINYD 160
Query: 161 QQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRR 220
+ + LYD+ +IA+ DF K +YEL + A+ Q + + + + D +E+ L N+
Sbjct: 161 RNKILYDKDIIAKADF--EKLEYELRLTEQAMQSFISQQKATWENQKRD-LEERLKNLNG 217
Query: 221 NVLLIRERKENLNVRSQIDGEL-GLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYI 279
V I N V + I G + + G VS Q I I+ + +E + + I
Sbjct: 218 TVFKINAESNNYVVTAPISGTIESFSGIQKGSFVSASQTIAIISSTDNLIVENNVSPNDI 277
Query: 280 DRVKAGLAATFERQGGNF 297
+K F+ N+
Sbjct: 278 GLIKKNQKVKFQLDAFNY 295
>gi|104783701|ref|YP_610199.1| multidrug RND transporter, membrane fusion protein [Pseudomonas
entomophila L48]
gi|95112688|emb|CAK17416.1| putative multidrug RND transporter, membrane fusion protein
[Pseudomonas]
Length = 361
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 207 QMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLS 266
Q D + NL N++ + +R+ GELG+ V LG V G+ + + DL+
Sbjct: 145 QFDAAKGNLENIQAQI-------AQKTIRAPFSGELGIRQVHLGDYVQAGRPLATLTDLN 197
Query: 267 DYKIEALIDEHYIDRVKAGLA---ATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGER 323
++ + E + G A A G FE +V + P+V + E
Sbjct: 198 GLRVNFTVSERDSANIVKGQAVELAVDAWSGMKFEGTVSAIDPQVNNSHVIKVQALLKEH 257
Query: 324 PDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDG--KKAYRRKIRIGR 381
+R G + +QL E +++P+ + G +FV ++ KK R+ I IG
Sbjct: 258 QGKLRPGMYAKVKVQLPGKDE-LVVPETAITYNAYGESVFVTYEENGLKKVRRQNISIGE 316
Query: 382 QNPQYYEVLEGLEAGERVVIS 402
+ V +GL+AG+ VV S
Sbjct: 317 RRDGLAVVAKGLQAGDEVVTS 337
>gi|78484799|ref|YP_390724.1| Secretion protein HlyD [Thiomicrospira crunogena XCL-2]
gi|78363085|gb|ABB41050.1| Efflux transporter, RND family, MFP subunit [Thiomicrospira
crunogena XCL-2]
Length = 373
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 71/351 (20%), Positives = 144/351 (41%), Gaps = 57/351 (16%)
Query: 64 VDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEK 123
V G V P Q++ G ++ V+ G +V +GD++ + +S+++ QIL A++ +
Sbjct: 58 VPGAVVPDQKAQIASRLMGYIKNFEVKVGQEVEKGDLLFSIDSSDVNSQILKAKSAYQQA 117
Query: 124 QNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDY 183
Q L++ + ++ DR KLY + ++++ F + Y
Sbjct: 118 QAALKDAK--LDYDRF-----------------------SKLYKDDSVSKQQFDKVSLQY 152
Query: 184 ELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELG 243
++ Q+ NL + N+ R + NV++ DG +
Sbjct: 153 KVAQE-------------------------NLVAAKTNLNQARSQLNYANVKAPFDGVVV 187
Query: 244 LLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRK 303
V G +PG + + +L+ ++ + E ++ G A G E
Sbjct: 188 DKMAVAGGLAAPGNPVLVLENLTSLSVKTQVAEDLFAVLRLGDEAEVMID-GQPESIKGT 246
Query: 304 VYPEVR--DGKFRTDFV-FTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGN 360
+Y V D K RT V + ++ SG + + G+ +++++PK +G
Sbjct: 247 IYTLVSAADPKTRTHTVKLSLPSMVSVNSGTFARVGFKRGE-RQTMMVPKTAVLNRSGIE 305
Query: 361 WIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYESYKNSE 411
+FV+++ KAY +R+G + E+ GL G+ +V+ + S N +
Sbjct: 306 GVFVVEEG--KAYFHMVRLGEEIGNKVEIKAGLNLGDHIVVDNNTSLLNGD 354
>gi|114320342|ref|YP_742025.1| efflux transporter, RND family, MFP subunit [Alkalilimnicola
ehrlichei MLHE-1]
gi|114226736|gb|ABI56535.1| efflux transporter, RND family, MFP subunit [Alkalilimnicola
ehrlichei MLHE-1]
Length = 374
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 14/233 (6%)
Query: 195 ERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNVS 254
ERL + ++DQ E + V + R + +R+ DG GL V +G V+
Sbjct: 126 ERLLATNHISQAELDQREAAMKVAGAQVQVARAELRDRQIRAPFDGVTGLRGVSVGAYVT 185
Query: 255 PGQKIGQINDLSDYKIEALIDEHYIDRVKAGLA--ATFERQGGNFELSVR----KVYPEV 308
I ++DL +++ + E ++ ++ G+ A + GG FE VR +V P
Sbjct: 186 TDTVITTLDDLERLRLDFSVPERFLPTLQVGMPVLAYSDGYGGAFEGEVRRLDSRVDPVT 245
Query: 309 RDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDK- 367
R + + + R + +R G ++L L + +++++P+ G ++FVL +
Sbjct: 246 RTLRLQAEL---DNRDNRLRPGMFMNVDLVLEREPDALLVPEEALLLEGRGKYVFVLQRG 302
Query: 368 --DGKKAYRRK-IRIGRQNPQYYEVLEGLEAGERVVISSYESYKN-SEILILS 416
D RR+ + G + +V +GL G+ VV S + ++ +E+ +L+
Sbjct: 303 EGDEPDLVRRQAVETGIRRGGRVQVTDGLAEGDYVVRSGLQRLRDGAEVRVLN 355
>gi|126648784|ref|ZP_01721267.1| efflux transporter, RND family, MFP subunit [Algoriphagus sp. PR1]
gi|126574926|gb|EAZ79284.1| efflux transporter, RND family, MFP subunit [Algoriphagus sp. PR1]
Length = 377
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 78/348 (22%), Positives = 141/348 (40%), Gaps = 72/348 (20%)
Query: 57 QFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNA 116
+F+ +V V G V V +S E G + E V EG +V +G ++ R+
Sbjct: 80 EFDHYVEVTGSVLSKKNVMISAETSGRILEVPVLEGMRVNKGTVLARI------------ 127
Query: 117 EAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDF 176
+AE+ E RN D L N L+L T + +QE+L+++++ +
Sbjct: 128 DAEIIE-----RNI------DELEN-----SLELATT----LFEKQERLWNQQIGTEVQY 167
Query: 177 LQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRS 236
L+AK E +E NLA+ R N+ + +R+
Sbjct: 168 LEAKNRKE-------------------------GLERNLASARTNL-------DKAIIRA 195
Query: 237 QIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAG--LAATFERQG 294
G + ++V LG+ V PG + Q SD IEA I E YI + G + F
Sbjct: 196 PFSGTIETVEVRLGELVQPGMGMFQFIGESDLFIEADISESYIGVLSKGDSVDVNFPSIN 255
Query: 295 GNFELSVRKVYPEV--RDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGT 352
+ + V V + + F+ + + ++ + + Q +++I+P
Sbjct: 256 KDIQTKVSSVGAIINPNNRTFKVEVLLPNM--SMVKPNMISVLKILDYQSADAVIVPSYL 313
Query: 353 FFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEAGERVV 400
G+++F ++ KA ++ + G+ + E+LEGL E +V
Sbjct: 314 ILSDNRGDYVFTVESG--KAVKKYVERGKTFDKETEILEGLTGTEMLV 359
>gi|86140817|ref|ZP_01059376.1| probable HlyD-family secretion protein [Flavobacterium sp. MED217]
gi|85832759|gb|EAQ51208.1| probable HlyD-family secretion protein [Leeuwenhoekiella blandensis
MED217]
Length = 391
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 76/371 (20%), Positives = 148/371 (39%), Gaps = 78/371 (21%)
Query: 58 FNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAE 117
F + V G V + L E G++ + V+EG +V +G + ++ + L ++ E
Sbjct: 83 FKHYFEVQGNVNTDQNIVLYAEYTGVLTQLYVKEGQRVAKGQRLAKIDDGGLGSELARQE 142
Query: 118 AELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFL 177
A+ A + TY +Q++L+D+K+ + ++L
Sbjct: 143 AQTALAKT--------------------------------TYERQKRLWDQKIGSEINYL 170
Query: 178 QAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQ 237
+AK +YE +Q + R+ + I
Sbjct: 171 EAKTNYEAMQAATDQLRSRVGKTVITAPFS------------------------------ 200
Query: 238 IDGELGLLDVVL---GQNVSPGQK-IGQINDLSDYKIEALIDEHYIDRVKAG--LAATFE 291
G++D L GQ V+ GQ + ++ +LSD +EA I E ++ +V G +
Sbjct: 201 -----GIVDNTLADQGQVVNAGQTGVLRLVNLSDMYVEASIPEAFLGKVSEGTDVKIRLA 255
Query: 292 RQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDN-IRSGQTYYINLQLGQPTESIIIPK 350
G ++ +R+V V D + PDN I+ + + +I++P+
Sbjct: 256 SIGKTYDGKIRQVGNFVSPDSRTFDVKISIPNPDNTIKPNLIATVMVNDYTSENAIVVPE 315
Query: 351 GTFFQSTGGN---WIFVLDKDGKK-AYRRKIRIGRQNPQYYEVLEGLEAGERVVISSYES 406
Q+ GN +++ DG A + +I+ G + Q E+ GL AG+R++I S
Sbjct: 316 NVVQQNALGNSITYVYEEQADGTAIAKQVQIKEGYSDDQRIEITSGLSAGDRLIIEGARS 375
Query: 407 YKNSEILILSK 417
++ + + L +
Sbjct: 376 LRDGQAVELKE 386
>gi|10956845|ref|NP_049065.1| putative aromatic efflux pump membrane protein [Novosphingobium
aromaticivorans]
gi|146275512|ref|YP_001165673.1| efflux pump membrane protein [Novosphingobium aromaticivorans DSM
12444]
gi|3378278|gb|AAD03861.1| putative aromatic efflux pump membrane protein [Novosphingobium
aromaticivorans]
gi|145322203|gb|ABP64147.1| efflux pump membrane protein [Novosphingobium aromaticivorans DSM
12444]
Length = 381
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 60 DFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAE 119
++V D + Q++P G E +VE+ QV+ GD++VRL +N + + AEA+
Sbjct: 51 NYVSTDNAYVNARMAQVTPLIAGSAIEVLVEDTQQVKAGDVLVRLDQANAKIAVAQAEAD 110
Query: 120 LAEK-----QNLLRNTQVTME---------QDRLRNKTEKLQLDLDITRRQRTYRQQEKL 165
LA Q + N+ ++ + Q R R +T + + D + + R++E +
Sbjct: 111 LAAARRKFGQAVATNSALSAQIDTSSAGLVQARARLRTAESEFD----KARIDLRRREAV 166
Query: 166 YDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRN---- 221
I+ E+ QA++ Y + + + R + Q+ N A +R +
Sbjct: 167 IASGAISGEELTQARKAYASANAALEAARGGISEVTSARRVAQGQLAANDALVRGSSVDT 226
Query: 222 -------------VLLIRERKENLNVRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDY 268
LL +R E +R+ + G + L + +GQ +SPGQ I I +
Sbjct: 227 DPAVQAAKARLDAALLDLQRTE---IRAPVSGVVSRLQIQVGQRLSPGQTIMTIVPIDKL 283
Query: 269 KIEALIDEHYIDRVKAGLAATFE 291
++A E + RV+ G+A T +
Sbjct: 284 YVDANFKEGQLGRVRPGMAVTLK 306
>gi|78777559|ref|YP_393874.1| Secretion protein HlyD [Thiomicrospira denitrificans ATCC 33889]
gi|78498099|gb|ABB44639.1| Secretion protein HlyD [Thiomicrospira denitrificans ATCC 33889]
Length = 381
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 86/398 (21%), Positives = 162/398 (40%), Gaps = 55/398 (13%)
Query: 13 KKHLPYIVGGIAFLLLVGWMIFGNHASTLRVDARGI--SIG--HVTHEQFNDFVRVDGQV 68
K +L YI+ G+ ++ +G IF N ++ + I SIG HVT +R G V
Sbjct: 2 KNYLKYIIPGV-IVVAIG-AIFYNKVYVVKSTFQTIKPSIGELHVT-------IRGIGNV 52
Query: 69 QPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLR 128
+ ++ + GG + E +EG V++GD+++ + + ++ L + A+A L
Sbjct: 53 DAKNIYNITAQSGGKINEIFFDEGDFVKKGDLLLIIDSVDMPLLVEEAKASL-------- 104
Query: 129 NTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQ 188
+ + +K K L+ T + T+ + +KL ++K +++ ++ +AK D +
Sbjct: 105 ---LKAGFEASSSKESKEALEAQRTLIESTHARYKKLLEQKYLSQAEYDKAKSDLTNIDA 161
Query: 189 KHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVV 248
Q + ++ + L +++++ ++E+ + + S +DG + D
Sbjct: 162 ----------QIASAKAKIASASSEEL-RLKKSIEALKEKLQRFKIYSPVDGYIISKDAE 210
Query: 249 LGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYPEV 308
L V P I +I D I IDE +K G AT N + P
Sbjct: 211 LASYVLPSSTIFKIVDPKTLWIRTNIDERVASELKVGQKATI-----NLRSKPNENIPAT 265
Query: 309 RDGKFRTDFVFTGER---------PDNIRSGQTYYINLQLGQPTESIIIPKGTF--FQST 357
T T ER PD + +++++ ++I IP ++
Sbjct: 266 LQRVVATSNAVTLEREINVGFDVTPDKFYINEQAEVHVEVATYKDAIKIPAKLLRTYKEQ 325
Query: 358 GGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEGLEA 395
G W+ DG A + I I QN V G+ A
Sbjct: 326 RGVWV----ADGDSALFKPIEILAQNDNEVAVKSGISA 359
>gi|17228998|ref|NP_485546.1| hypothetical protein alr1505 [Nostoc sp. PCC 7120]
gi|17135326|dbj|BAB77871.1| alr1505 [Nostoc sp. PCC 7120]
Length = 504
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 62 VRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELA 121
V +G VQP V +SP+ GI+++ +V+EG V++G I+ + +SNL Q+ A+ LA
Sbjct: 80 VSANGTVQPERSVNVSPKTSGILKQLLVKEGDSVQQGQILAYMDDSNLQGQLHQAQGNLA 139
Query: 122 EKQ-------NLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIARE 174
Q N R + Q +L + LQ L+ R Q + Q +L D + R
Sbjct: 140 AAQANVQKLVNGNRAEDIATAQAQLAEQEANLQKLLNGNRLQEVAQAQAQLKDAQYALR- 198
Query: 175 DFLQAKEDYELVQQKHA 191
QA++D + Q+ ++
Sbjct: 199 ---QAEDDLQRNQKLYS 212
>gi|119773281|ref|YP_926021.1| secretion protein HlyD [Shewanella amazonensis SB2B]
gi|119765781|gb|ABL98351.1| secretion protein HlyD [Shewanella amazonensis SB2B]
Length = 356
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 81/386 (20%), Positives = 146/386 (37%), Gaps = 64/386 (16%)
Query: 27 LLVGWMIFGNHASTLRVDARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQE 86
LL +I G L D R + + V + + V G V ++ QL+ G + E
Sbjct: 8 LLALALIMG--GQVLAADERSVGVATVEQRPLSPKLMVVGTVHSRSLAQLTTGVAGKL-E 64
Query: 87 KVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKL 146
V E G +V G+++ RL + L LQ LAE+Q L+ ++ +
Sbjct: 65 WVQEAGTRVSAGEVVARLDATPLTLQ-------LAEQQALVNREEIAL------------ 105
Query: 147 QLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSI 206
R +R + E+L + I+R + + + +L K +L + R +
Sbjct: 106 ------ARLERNLTRLERLAASQSISRTEIDDTRSERDLA--KSSLELAR---------V 148
Query: 207 QMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVV----LGQNVSPGQKIGQI 262
++D + DNLA R+Q+ G + + G++V P + + I
Sbjct: 149 RLDIIRDNLA------------------RTQLKAPFGGIVISRSHQAGEDVGPAEPVLTI 190
Query: 263 NDLSDYKIEALIDEHYIDRVKAGLAATFERQGGNFELSVRKVYP--EVRDGKFRTDFVFT 320
D +I + RV G G F +R + P +VR F
Sbjct: 191 TDPDHLEIRLHAPLKHSRRVNIGDELKVYHSNGEFSARIRTLIPVSDVRSQTFEARLDLP 250
Query: 321 GERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIG 380
I G+ + L + T + ++P+ + G +F + + + A R + +G
Sbjct: 251 QAMAREINIGELVSMALPIAPATLTTLVPRDALVLRSSGASVFRVTPE-QTAERIPVTLG 309
Query: 381 RQNPQYYEVLEGLEAGERVVISSYES 406
+ V L AG+ +VI E+
Sbjct: 310 DGEGPWIAVRGELNAGDTLVIRGAET 335
>gi|120553248|ref|YP_957599.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
VT8]
gi|120323097|gb|ABM17412.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
VT8]
Length = 413
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 14/240 (5%)
Query: 66 GQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQN 125
G+V + ++ G + V EG QV GD++V L +++++ + A A++A+ +
Sbjct: 58 GEVVAPDLQTITATLAGRIDRLPVREGQQVSEGDLLVALDSADIEPVLAQARAQVADLEA 117
Query: 126 LLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYEL 185
+R+ QV D+ ++EK LD +R + + + L + L +RE+ L+A D
Sbjct: 118 QVRSEQVRYRNDQRSLESEKAILD----NARRQFERIQSLVERNLASREN-LEAATD--- 169
Query: 186 VQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLL 245
+ L + + ++ +E L+ R ++ E + DG + L
Sbjct: 170 ALARAELTVRTRERAIAEHPARLQSLEARLSQARASLSTAELDGERAVSTAPFDGMVTNL 229
Query: 246 DVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYIDRV------KAGLAATFERQGGNFEL 299
V G VS Q + I + ++ A + + Y+ + A L AT E G FEL
Sbjct: 230 QVAAGDQVSRNQALLSIYPIQGLEVRARVPKMYLGELVDALAKGATLTATTEDSGQRFEL 289
>gi|152983106|ref|YP_001353461.1| cobalt-zinc-cadmium resistance protein CzcB [Janthinobacterium sp.
Marseille]
gi|151283183|gb|ABR91593.1| cobalt-zinc-cadmium resistance protein CzcB [Janthinobacterium sp.
Marseille]
Length = 526
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 81/330 (24%), Positives = 128/330 (38%), Gaps = 60/330 (18%)
Query: 74 VQLSPEEGGIVQEKVVEEGAQVRRGDIIVRLSNSNLDLQILNAEAELAEKQNLLRNTQVT 133
VQ+ P GIV+ G +VR+G I+ +S+ L Q +E A+K+ L T
Sbjct: 228 VQVVPRLAGIVESVRANAGDRVRKGQILAVISSQALSDQ--RSELLAAQKRLALART--- 282
Query: 134 MEQDRLRNKTEKLQLDLDITRRQRTYRQQEKLYDEKLIAREDFLQAKEDYELVQQKHALI 193
TY +++ L++EK+ A +D+LQA+ + A I
Sbjct: 283 ------------------------TYEREKTLWEEKISAEQDYLQAR-----TTMQEAQI 313
Query: 194 IERLHQDSIYRSIQMDQMEDNLANMRRNVLLIRERKENLNVRSQIDGELGLLDVVLGQNV 253
I + Q + ++ NL +RS IDG + + G
Sbjct: 314 IAQSAQQKL-AALGASPSSTNLTQYE--------------IRSPIDGVITEKRISAGTVA 358
Query: 254 SPGQKIGQINDLSDYKIEALIDEHYIDRVKAGLAAT-----FERQG-GNFELSVRKVYPE 307
I I+DLS ++ + I+ VK G AT F+ +G G V +
Sbjct: 359 KEDANIFDISDLSTVWVDLTVRAQDINAVKTGQKATVKATAFDAEGTGTVSYIGSLVGEQ 418
Query: 308 VRDGKFRTDFVFTGERPDNIRSGQTYYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDK 367
R K R + R G +N+ L + + T T GN V +
Sbjct: 419 TRAAKAR---IVMANPKGTWRPGLA--VNVALVSDEVDVPVAVTTDSIQTLGNATVVFGR 473
Query: 368 DGKKAYRRKIRIGRQNPQYYEVLEGLEAGE 397
G+ R + +GR+ +Y EVL+GLE GE
Sbjct: 474 YGELFEARPLELGRRGAKYVEVLKGLETGE 503
>gi|150388153|ref|YP_001318202.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
metalliredigens QYMF]
gi|149948015|gb|ABR46543.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
metalliredigens QYMF]
Length = 384
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 79/369 (21%), Positives = 148/369 (40%), Gaps = 29/369 (7%)
Query: 44 DARGISIGHVTHEQFNDFVRVDGQVQPITVVQLSPEEGGIVQEKVVEEGAQVRRGDIIVR 103
D + + V + ++G+V V + P GIV V+ G V++ ++
Sbjct: 34 DYVAVEVSQVEMRGLANEATLNGRVFSENEVMVLPRTPGIVDCVNVKLGDSVQKDQVLFV 93
Query: 104 L-SNSNLDLQILNAEAELAEKQNLLRNTQVTMEQDRLRNKTEKLQLDLDITRRQRTYRQQ 162
L +S++ L I AE + ++ + T+ + L K+ D Q +
Sbjct: 94 LEQDSSVLLGIEQAEEAV---KSATKGTEQAAQGIALAENQYKMAKD-QYDDAQANLERI 149
Query: 163 EKLYDEKLIAREDFLQAKEDYELVQQKHALIIERLHQDSIYRSIQMDQMEDNLANMRRNV 222
+ LYD + + QA E+ +L+ R S Q L +R+
Sbjct: 150 KSLYDAGAVPKTQLDQA----EMAAADGSLVAARSQITQAEISYQ-----QTLGQLRQAE 200
Query: 223 LLIRERKENLN---VRSQIDGELGLLDVVLGQNVSPGQKIGQINDLSDYKIEALIDEHYI 279
+ + + + NLN V++ G + LD+ +GQ V+ Q + I D++ I+ + E+ I
Sbjct: 201 ISVDQARTNLNHLEVKAPASGIISTLDLRVGQMVTNAQPVATIVDVNALYIQFELPENMI 260
Query: 280 DRVKAGL-------AATFERQGGNFELSVRKVYPEVRDGKFRTDFVFTGERPDNIRSGQT 332
++ K G AA L + R D +G D +R G T
Sbjct: 261 NQFKRGQEVVVSIPAANVRDAKATVGLVSAATDQRTQLYPVRIDLTKSG---DLVRPGST 317
Query: 333 YYINLQLGQPTESIIIPKGTFFQSTGGNWIFVLDKDGKKAYRRKIRIGRQNPQYYEVLEG 392
+ + Q ++II ++V++ D A RK+ +G +Y E++EG
Sbjct: 318 GEVQVATNQTGNALIIESRAILNQDNETLVYVVEND--HAVERKVTLGLDTAEYVEIIEG 375
Query: 393 LEAGERVVI 401
+ G++V+I
Sbjct: 376 VSEGQQVII 384
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.318 0.138 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,468,479,191
Number of Sequences: 5470121
Number of extensions: 63004275
Number of successful extensions: 216339
Number of sequences better than 1.0e-05: 500
Number of HSP's better than 0.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 559
Number of HSP's that attempted gapping in prelim test: 215433
Number of HSP's gapped (non-prelim): 792
length of query: 417
length of database: 1,894,087,724
effective HSP length: 135
effective length of query: 282
effective length of database: 1,155,621,389
effective search space: 325885231698
effective search space used: 325885231698
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)