BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SSA_2038
(320 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|125718828|ref|YP_001035961.1| hypothetical protein SSA_2... 587 e-166
gi|157074631|gb|ABV09314.1| membrane spanning protein [Stre... 511 e-143
gi|149020838|ref|ZP_01835367.1| hypothetical protein CGSSp2... 409 e-112
gi|15901585|ref|NP_346189.1| hypothetical protein SP_1754 [... 408 e-112
gi|148984199|ref|ZP_01817494.1| hypothetical protein CGSSp3... 408 e-112
gi|15903641|ref|NP_359191.1| hypothetical protein spr1599 [... 407 e-112
gi|148997812|ref|ZP_01825376.1| hypothetical protein CGSSp1... 407 e-112
gi|146319559|ref|YP_001199271.1| hypothetical protein SSU05... 358 3e-97
gi|94994510|ref|YP_602608.1| Integral membrane protein [Str... 289 1e-76
gi|15675213|ref|NP_269387.1| hypothetical protein SPy_1253 ... 288 2e-76
gi|19746182|ref|NP_607318.1| hypothetical protein spyM18_12... 288 3e-76
gi|50914299|ref|YP_060271.1| Integral membrane protein [Str... 288 4e-76
gi|94990587|ref|YP_598687.1| Integral membrane protein [Str... 286 1e-75
gi|21910425|ref|NP_664693.1| hypothetical protein SpyM3_088... 286 1e-75
gi|28211628|ref|NP_782572.1| membrane spanning protein [Clo... 219 3e-55
gi|116873304|ref|YP_850085.1| hypothetical protein lwe1888 ... 201 4e-50
gi|16801049|ref|NP_471317.1| hypothetical protein lin1983 [... 201 6e-50
gi|16803909|ref|NP_465394.1| hypothetical protein lmo1869 [... 197 7e-49
gi|153175098|ref|ZP_01930493.1| hypothetical protein LMIG_0... 197 1e-48
gi|47096911|ref|ZP_00234489.1| conserved hypothetical prote... 197 1e-48
gi|46908101|ref|YP_014490.1| hypothetical protein LMOf2365_... 196 2e-48
gi|15895749|ref|NP_349098.1| Predicted membrane, YQJA B.sub... 193 1e-47
gi|29376438|ref|NP_815592.1| hypothetical protein EF1910 [E... 188 5e-46
gi|89207949|ref|ZP_01186476.1| Protein of unknown function ... 181 7e-44
gi|110802471|ref|YP_698845.1| hypothetical protein CPR_1527... 178 4e-43
gi|18310539|ref|NP_562473.1| hypothetical protein CPE1557 [... 175 3e-42
gi|52141348|ref|YP_085482.1| hypothetical protein BCZK3902 ... 174 5e-42
gi|152976557|ref|YP_001376074.1| protein of unknown functio... 174 5e-42
gi|118479344|ref|YP_896495.1| hypothetical protein BALH_376... 174 6e-42
gi|30022231|ref|NP_833862.1| Integral membrane protein [Bac... 174 9e-42
gi|30264226|ref|NP_846603.1| hypothetical protein BA4373 [B... 174 9e-42
gi|42783268|ref|NP_980515.1| hypothetical protein BCE_4222 ... 173 1e-41
gi|47568213|ref|ZP_00238917.1| integral membrane protein [B... 173 1e-41
gi|154686656|ref|YP_001421817.1| YqjA [Bacillus amyloliquef... 172 4e-41
gi|148379049|ref|YP_001253590.1| membrane protein [Clostrid... 171 5e-41
gi|49478845|ref|YP_038214.1| hypothetical protein BT9727_38... 171 5e-41
gi|153941329|ref|YP_001390417.1| hypothetical protein CLI_1... 171 6e-41
gi|56963515|ref|YP_175246.1| hypothetical protein ABC1750 [... 169 2e-40
gi|16079451|ref|NP_390275.1| hypothetical protein BSU23950 ... 168 5e-40
gi|106886220|ref|ZP_01353565.1| Protein of unknown function... 167 1e-39
gi|116494611|ref|YP_806345.1| Predicted membrane protein [L... 165 4e-39
gi|156866716|gb|EDO60088.1| hypothetical protein CLOLEP_029... 163 1e-38
gi|89099285|ref|ZP_01172163.1| YqjA [Bacillus sp. NRRL B-14... 162 3e-38
gi|52080936|ref|YP_079727.1| conserved membrane protein Yqj... 157 6e-37
gi|149181894|ref|ZP_01860383.1| YqjA [Bacillus sp. SG-1] >g... 156 2e-36
gi|15614027|ref|NP_242330.1| hypothetical protein BH1464 [B... 154 5e-36
gi|56420888|ref|YP_148206.1| hypothetical protein GK2353 [G... 152 3e-35
gi|23099317|ref|NP_692783.1| hypothetical protein OB1862 [O... 150 1e-34
gi|150018846|ref|YP_001311100.1| protein of unknown functio... 144 6e-33
gi|68055584|ref|ZP_00539728.1| protein of unknown function ... 143 2e-32
gi|138895937|ref|YP_001126390.1| hypothetical protein GTNG_... 142 4e-32
gi|73662551|ref|YP_301332.1| hypothetical protein SSP1242 [... 136 1e-30
gi|82751118|ref|YP_416859.1| probable membrane protein [Sta... 127 8e-28
gi|27468112|ref|NP_764749.1| hypothetical protein SE1194 [S... 126 2e-27
gi|49483763|ref|YP_040987.1| hypothetical protein SAR1591 [... 125 2e-27
gi|21283195|ref|NP_646283.1| hypothetical protein MW1466 [S... 125 2e-27
gi|15924503|ref|NP_372037.1| hypothetical protein SAV1513 [... 125 5e-27
gi|57866994|ref|YP_188651.1| hypothetical protein SERP1074 ... 124 1e-26
gi|126700660|ref|YP_001089557.1| hypothetical protein CD304... 123 1e-26
gi|145953491|ref|ZP_01802499.1| hypothetical protein CdifQ_... 123 2e-26
gi|70726403|ref|YP_253317.1| hypothetical protein SH1402 [S... 119 2e-25
gi|126653085|ref|ZP_01725220.1| YqjA [Bacillus sp. B14905] ... 113 2e-23
gi|75761962|ref|ZP_00741881.1| Integral membrane protein [B... 91 8e-17
gi|154503707|ref|ZP_02040767.1| hypothetical protein RUMGNA... 87 2e-15
>gi|125718828|ref|YP_001035961.1| hypothetical protein SSA_2038 [Streptococcus sanguinis SK36]
gi|125498745|gb|ABN45411.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 320
Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats.
Identities = 320/320 (100%), Positives = 320/320 (100%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL
Sbjct: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL
Sbjct: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA
Sbjct: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS
Sbjct: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD
Sbjct: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
Query: 301 LETFIELKVDFYRNYQEERN 320
LETFIELKVDFYRNYQEERN
Sbjct: 301 LETFIELKVDFYRNYQEERN 320
>gi|157074631|gb|ABV09314.1| membrane spanning protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 320
Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats.
Identities = 279/320 (87%), Positives = 296/320 (92%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
MSLL RTIKL LATCLAA LA LGLAYS SAGIIA+LSV+DTRRSTA+LA +RFLSTLL
Sbjct: 1 MSLLHRTIKLMLATCLAACLAKTLGLAYSVSAGIIALLSVSDTRRSTARLARDRFLSTLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
ALAIGSLAFHFLGF+LGALA+YIAIYVPLAF+LGWEIGITPSTVLV+HLLLEKSTSW LL
Sbjct: 61 ALAIGSLAFHFLGFNLGALALYIAIYVPLAFQLGWEIGITPSTVLVSHLLLEKSTSWLLL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
GNELALFLIGT FALLANLYMPSRQ+EID YHEQVEEQLKKILLRFEYFLK+GDGRNDA
Sbjct: 121 GNELALFLIGTGFALLANLYMPSRQEEIDYYHEQVEEQLKKILLRFEYFLKSGDGRNDAT 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LIKELDT L+QAL+LVYLD SNHLFHQTNYHIHYFEMR+AQNRIL DMA NIN C LAAS
Sbjct: 181 LIKELDTTLEQALQLVYLDRSNHLFHQTNYHIHYFEMRRAQNRILLDMAGNINTCRLAAS 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ES ILA+LF +TAKQLSQENP DLLDEI+ YL VFR+RPLPKTRQEFETRA LLQLLRD
Sbjct: 241 ESFILAKLFLKTAKQLSQENPGHDLLDEIEEYLAVFRKRPLPKTRQEFETRATLLQLLRD 300
Query: 301 LETFIELKVDFYRNYQEERN 320
LETFIELKVDFYRNYQEERN
Sbjct: 301 LETFIELKVDFYRNYQEERN 320
>gi|149020838|ref|ZP_01835367.1| hypothetical protein CGSSp23BS72_02334 [Streptococcus pneumoniae
SP23-BS72]
gi|147930479|gb|EDK81462.1| hypothetical protein CGSSp23BS72_02334 [Streptococcus pneumoniae
SP23-BS72]
Length = 317
Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 220/317 (69%), Positives = 262/317 (82%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
MS+ QRT KL LATCLA LA FL L+ + SAGIIA+LS++DTRRST KLA NR S LL
Sbjct: 1 MSISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
ALAIG LAFH GFH+ +L +Y+A YVPLA+++GWEIGITPSTVLV+HLL+++STS LL
Sbjct: 61 ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF IGT FALL NLYMPSR++EI YH VEE+LK IL RF+Y+L GDGRN A
Sbjct: 121 VNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
L+ ELDT+L++AL LVYLDHS+HLFHQT+YHIHYFEMRQ Q+RIL++MA IN CHLAAS
Sbjct: 181 LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ESLILA+LFS+ A QLSQ NPA DLLDEI++YL VFR R LPKTR+EFETRA LLQLLR+
Sbjct: 241 ESLILAQLFSKIAGQLSQTNPASDLLDEIESYLEVFRNRSLPKTREEFETRATLLQLLRE 300
Query: 301 LETFIELKVDFYRNYQE 317
+TFI++KVDFY+ Y +
Sbjct: 301 AKTFIQVKVDFYQKYGQ 317
>gi|15901585|ref|NP_346189.1| hypothetical protein SP_1754 [Streptococcus pneumoniae TIGR4]
gi|111657466|ref|ZP_01408213.1| hypothetical protein SpneT_02001317 [Streptococcus pneumoniae
TIGR4]
gi|148989420|ref|ZP_01820788.1| hypothetical protein CGSSp6BS73_07979 [Streptococcus pneumoniae
SP6-BS73]
gi|148994942|ref|ZP_01823944.1| hypothetical protein CGSSp9BS68_00702 [Streptococcus pneumoniae
SP9-BS68]
gi|149002062|ref|ZP_01827016.1| hypothetical protein CGSSp14BS69_10136 [Streptococcus pneumoniae
SP14-BS69]
gi|149006577|ref|ZP_01830276.1| hypothetical protein CGSSp18BS74_02271 [Streptococcus pneumoniae
SP18-BS74]
gi|149011374|ref|ZP_01832621.1| hypothetical protein CGSSp19BS75_08187 [Streptococcus pneumoniae
SP19-BS75]
gi|14973250|gb|AAK75829.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|147759871|gb|EDK66861.1| hypothetical protein CGSSp14BS69_10136 [Streptococcus pneumoniae
SP14-BS69]
gi|147761875|gb|EDK68838.1| hypothetical protein CGSSp18BS74_02271 [Streptococcus pneumoniae
SP18-BS74]
gi|147764364|gb|EDK71295.1| hypothetical protein CGSSp19BS75_08187 [Streptococcus pneumoniae
SP19-BS75]
gi|147925170|gb|EDK76250.1| hypothetical protein CGSSp6BS73_07979 [Streptococcus pneumoniae
SP6-BS73]
gi|147926944|gb|EDK77990.1| hypothetical protein CGSSp9BS68_00702 [Streptococcus pneumoniae
SP9-BS68]
Length = 317
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 220/317 (69%), Positives = 262/317 (82%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
MS+ QRT KL LATCLA LA FL L+ + SAGIIA+LS++DTRRST KLA NR S LL
Sbjct: 1 MSISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
ALAIG LAFH GFH+ +L +Y+A YVPLA+++GWEIGITPSTVLV+HLL+++STS LL
Sbjct: 61 ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF IGT FALL NLYMPSR++EI YH VEE+LK IL RF+Y+L GDGRN A
Sbjct: 121 VNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
L+ ELDT+L++AL LVYLDHS+HLFHQT+YHIHYFEMRQ Q+RIL++MA IN CHLAAS
Sbjct: 181 LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ESLILA+LFS+ A QLSQ NPA DLLDEI+ YL VFR R LPKTR+EFETRA LLQLLR+
Sbjct: 241 ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLRE 300
Query: 301 LETFIELKVDFYRNYQE 317
+TFI++KVDFY+ Y++
Sbjct: 301 AKTFIQVKVDFYQKYRQ 317
>gi|148984199|ref|ZP_01817494.1| hypothetical protein CGSSp3BS71_03222 [Streptococcus pneumoniae
SP3-BS71]
gi|147923488|gb|EDK74601.1| hypothetical protein CGSSp3BS71_03222 [Streptococcus pneumoniae
SP3-BS71]
Length = 317
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 220/317 (69%), Positives = 261/317 (82%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
MS+ QRT KL LATCLA LA FL L+ + SAGIIA+LS++DTRRST KLA NR S LL
Sbjct: 1 MSISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
ALAIG LAFH GFH+ +L +Y+A YVPLA+++GWEIGITPSTVLV+HLL+++STS LL
Sbjct: 61 ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF IGT FALL NLYMPSR++EI YH VEE+LK IL RF+Y+L GDGRN A
Sbjct: 121 VNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
L+ ELDT+L++AL LVYLDHS+HLFHQT+YHIHYFEMRQ Q+RIL++MA IN CHLAAS
Sbjct: 181 LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ESLILA+LFS+ A QLSQ NPA DLLDEI+ YL VFR R LPKTR+EFETRA LLQLLR+
Sbjct: 241 ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLRE 300
Query: 301 LETFIELKVDFYRNYQE 317
+TFI++KVDFY+ Y +
Sbjct: 301 AKTFIQVKVDFYQKYGQ 317
>gi|15903641|ref|NP_359191.1| hypothetical protein spr1599 [Streptococcus pneumoniae R6]
gi|116517163|ref|YP_817017.1| hypothetical protein SPD_1564 [Streptococcus pneumoniae D39]
gi|15459267|gb|AAL00402.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116077739|gb|ABJ55459.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
Length = 317
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 219/317 (69%), Positives = 261/317 (82%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
MS+ QRT KL LATCLA A FL L+ + SAGIIA+LS++DTRRST KLA NR S LL
Sbjct: 1 MSISQRTTKLILATCLACLFAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
ALAIG LAFH GFH+ +L +Y+A YVPLA+++GWEIGITPSTVLV+HLL+++STS LL
Sbjct: 61 ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF IGT FALL NLYMPSR++EI YH VEE+LK IL RF+Y+L GDGRN A
Sbjct: 121 VNEFLLFAIGTGFALLVNLYMPSREEEIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
L+ ELDT+L++AL LVYLDHS+HLFHQT+YHIHYFEMRQ Q+RIL++MA IN CHLAAS
Sbjct: 181 LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ESLILA+LFS+ A QLSQ NPA DLLDEI+ YL VFR R LPKTR+EFETRA LLQLLR+
Sbjct: 241 ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLRE 300
Query: 301 LETFIELKVDFYRNYQE 317
+TFI++KVDFY+ Y++
Sbjct: 301 AKTFIQVKVDFYQKYRQ 317
>gi|148997812|ref|ZP_01825376.1| hypothetical protein CGSSp11BS70_02854 [Streptococcus pneumoniae
SP11-BS70]
gi|147756311|gb|EDK63353.1| hypothetical protein CGSSp11BS70_02854 [Streptococcus pneumoniae
SP11-BS70]
Length = 317
Score = 407 bits (1045), Expect = e-112, Method: Composition-based stats.
Identities = 219/317 (69%), Positives = 261/317 (82%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
MS+ QRT KL LATCLA LA FL L+ + SAGIIA+LS++DTRRST KLA NR S LL
Sbjct: 1 MSISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
ALAIG LAFH GFH+ +L +Y+A YVPLA+++GWEIGITPSTVLV+HLL+++STS LL
Sbjct: 61 ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF IGT FALL NLYMPSR+++I YH VEE+LK IL RF+Y+L GDGRN A
Sbjct: 121 VNEFLLFAIGTGFALLVNLYMPSREEKIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
L+ ELDT+L++AL LVYLDHS+HLFHQT+YHIHYFEMRQ Q+RIL++MA IN CHLAAS
Sbjct: 181 LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ESLILA+LFS+ A QLSQ NPA DLLDEI+ YL VFR R LPKTR+EFETRA LLQLLR+
Sbjct: 241 ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLRE 300
Query: 301 LETFIELKVDFYRNYQE 317
+TFI++KVDFY+ Y +
Sbjct: 301 AKTFIQVKVDFYQKYGQ 317
>gi|146319559|ref|YP_001199271.1| hypothetical protein SSU05_1905 [Streptococcus suis 05ZYH33]
gi|146321754|ref|YP_001201465.1| hypothetical protein SSU98_1907 [Streptococcus suis 98HAH33]
gi|145690365|gb|ABP90871.1| hypothetical protein SSU05_1905 [Streptococcus suis 05ZYH33]
gi|145692560|gb|ABP93065.1| hypothetical protein SSU98_1907 [Streptococcus suis 98HAH33]
Length = 322
Score = 358 bits (918), Expect = 3e-97, Method: Composition-based stats.
Identities = 194/318 (61%), Positives = 241/318 (75%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
MSL RTIKL AT LA +LA LGL+Y+T+AGIIAILSV DTR+S+ K+A NR STLL
Sbjct: 1 MSLSLRTIKLIFATVLAIYLATVLGLSYTTAAGIIAILSVLDTRKSSFKMARNRLFSTLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
AL I L F GF + L +Y+A+YVPLA+R WE GI PSTVLVTHLLLE+ S L
Sbjct: 61 ALTIAVLTFALFGFGIWTLGIYLALYVPLAYRFNWEAGIAPSTVLVTHLLLEQDISLIFL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
GNEL LFLIG ALL NLYMPS++++I +YH+QVE+ LK+ILLRFE FL GDGRN+A
Sbjct: 121 GNELTLFLIGAGLALLFNLYMPSQEKKIQAYHDQVEDLLKQILLRFEAFLLNGDGRNEAE 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LI +LD L +AL++VYLD N LF QTNY +HYFEMR AQN+IL+ MA NIN C L
Sbjct: 181 LITQLDKTLDEALKVVYLDRHNQLFQQTNYQVHYFEMRAAQNKILRTMAGNINKCLLEGR 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
E++IL+ LF + A+QLS++N A++LL +I+ + FRERPLP+TR+EFETRA L QLL D
Sbjct: 241 ENVILSSLFERAAQQLSRDNSAKELLLDIELFHATFRERPLPQTREEFETRATLFQLLHD 300
Query: 301 LETFIELKVDFYRNYQEE 318
+E FI LKVDFY Y+++
Sbjct: 301 MEAFIRLKVDFYEVYKDQ 318
>gi|94994510|ref|YP_602608.1| Integral membrane protein [Streptococcus pyogenes MGAS10750]
gi|94548018|gb|ABF38064.1| Integral membrane protein [Streptococcus pyogenes MGAS10750]
Length = 318
Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats.
Identities = 162/318 (50%), Positives = 214/318 (67%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M ++RT+K+ LAT +A +A L L Y+ SAGIIA+LSV DTR+S+ +A NR LS L
Sbjct: 1 MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A I + F GF Y+ I +PL + E G+ P TVLVTHL+ +KS + +L
Sbjct: 61 AFGIAMMCFSLFGFTTVGFMCYLLIIIPLLYHFQIEAGLVPITVLVTHLIAKKSIALPIL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF +GTS ALL N YM S+ Q+I YH++VE LK IL RFE FL G G+N+
Sbjct: 121 SNEFMLFFVGTSVALLFNAYMGSQDQQIRYYHQKVESDLKGILYRFESFLLEGKGQNEGL 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LIK LD IL +AL+LVY + N LF QTNY +HYFEMR+ QNR+L MA N+N +
Sbjct: 181 LIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ES++L+ LF +TA QLS++NPA L+D+I+ L FR LP+TR+EFE RA+L QLL+D
Sbjct: 241 ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQD 300
Query: 301 LETFIELKVDFYRNYQEE 318
LE FI LKV+FY++YQ +
Sbjct: 301 LERFILLKVEFYQDYQND 318
>gi|15675213|ref|NP_269387.1| hypothetical protein SPy_1253 [Streptococcus pyogenes M1 GAS]
gi|56808387|ref|ZP_00366140.1| COG4129: Predicted membrane protein [Streptococcus pyogenes M49
591]
gi|71903601|ref|YP_280404.1| integral membrane protein [Streptococcus pyogenes MGAS6180]
gi|71910776|ref|YP_282326.1| integral membrane protein [Streptococcus pyogenes MGAS5005]
gi|94988697|ref|YP_596798.1| integral membrane protein [Streptococcus pyogenes MGAS9429]
gi|94992520|ref|YP_600619.1| Integral membrane protein [Streptococcus pyogenes MGAS2096]
gi|139473678|ref|YP_001128394.1| hypothetical protein SpyM50835 [Streptococcus pyogenes str.
Manfredo]
gi|13622381|gb|AAK34108.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71802696|gb|AAX72049.1| integral membrane protein [Streptococcus pyogenes MGAS6180]
gi|71853558|gb|AAZ51581.1| integral membrane protein [Streptococcus pyogenes MGAS5005]
gi|94542205|gb|ABF32254.1| integral membrane protein [Streptococcus pyogenes MGAS9429]
gi|94546028|gb|ABF36075.1| Integral membrane protein [Streptococcus pyogenes MGAS2096]
gi|134271925|emb|CAM30163.1| putative membrane protein [Streptococcus pyogenes str. Manfredo]
Length = 318
Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats.
Identities = 161/318 (50%), Positives = 213/318 (66%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M ++RT+K+ LAT +A +A L L Y+ SAGIIA+LSV DTR+S+ +A NR LS L
Sbjct: 1 MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A I + F GF Y+ I +PL + E G+ P TVLVTHL+ +KS + +L
Sbjct: 61 AFGIAMMCFSLFGFTTVGFMCYLLIIIPLLYHFQIEAGLVPITVLVTHLIAKKSIALPIL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF +GTS ALL N YM + Q+I YH++VE LK IL RFE FL G G+N+
Sbjct: 121 SNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLKGILYRFESFLLEGKGQNEGL 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LIK LD IL +AL+LVY + N LF QTNY +HYFEMR+ QNR+L MA N+N +
Sbjct: 181 LIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ES++L+ LF +TA QLS++NPA L+D+I+ L FR LP+TR+EFE RA+L QLL+D
Sbjct: 241 ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQD 300
Query: 301 LETFIELKVDFYRNYQEE 318
LE FI LKV+FY++YQ +
Sbjct: 301 LERFILLKVEFYQDYQND 318
>gi|19746182|ref|NP_607318.1| hypothetical protein spyM18_1202 [Streptococcus pyogenes MGAS8232]
gi|19748363|gb|AAL97817.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 318
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 161/318 (50%), Positives = 213/318 (66%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M ++RT+K+ LAT +A +A L L Y+ SAGIIA+LSV DTR+S+ +A NR LS L
Sbjct: 1 MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A I + F GF Y+ I +PL + E G+ P TVLVTHL+ +KS + +L
Sbjct: 61 AFGIAMMCFSLFGFTTVGFMCYLLIIIPLLYHFQIEAGLVPITVLVTHLIAKKSIALPIL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF +GTS ALL N YM + Q+I YH++VE LK IL RFE FL G G+N+
Sbjct: 121 SNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLKGILYRFESFLLEGKGQNEGL 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LIK LD IL +AL+LVY + N LF QTNY +HYFEMR+ QNR+L MA N+N +
Sbjct: 181 LIKNLDKILGEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ES++L+ LF +TA QLS++NPA L+D+I+ L FR LP+TR+EFE RA+L QLL+D
Sbjct: 241 ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQD 300
Query: 301 LETFIELKVDFYRNYQEE 318
LE FI LKV+FY++YQ +
Sbjct: 301 LERFILLKVEFYQDYQND 318
>gi|50914299|ref|YP_060271.1| Integral membrane protein [Streptococcus pyogenes MGAS10394]
gi|50903373|gb|AAT87088.1| Integral membrane protein [Streptococcus pyogenes MGAS10394]
Length = 318
Score = 288 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 161/318 (50%), Positives = 212/318 (66%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M ++RT+K+ LAT +A +A L L Y+ SAGIIA+LSV DTR+S+ +A NR LS L
Sbjct: 1 MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A I + F GF Y+ I +PL + E G+ P TVLVTHL+ +KS + +L
Sbjct: 61 AFGIAMMCFSLFGFTTVGFMCYLLIIIPLLYHFQIEAGLVPITVLVTHLIAKKSIALPIL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF +GTS ALL N YM + Q+I YH++VE LK IL RFE FL G G+N+
Sbjct: 121 SNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLKGILYRFESFLLEGKGQNEGL 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LIK LD IL +AL+LVY + N LF QTNY +HYFEMR+ QNR+L MA N+N +
Sbjct: 181 LIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ES++L+ LF +TA QLS++NPA L D+I+ L FR LP+TR+EFE RA+L QLL+D
Sbjct: 241 ESILLSHLFHETACQLSEQNPALTLFDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQD 300
Query: 301 LETFIELKVDFYRNYQEE 318
LE FI LKV+FY++YQ +
Sbjct: 301 LERFILLKVEFYQDYQND 318
>gi|94990587|ref|YP_598687.1| Integral membrane protein [Streptococcus pyogenes MGAS10270]
gi|94544095|gb|ABF34143.1| Integral membrane protein [Streptococcus pyogenes MGAS10270]
Length = 318
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 160/318 (50%), Positives = 213/318 (66%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M ++RT+K+ LAT +A +A L L Y+ SAGIIA+LSV DTR+S+ +A NR LS L
Sbjct: 1 MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A I + F GF Y+ I +PL + E G+ P TVLVTHL+ +KS + +L
Sbjct: 61 AFGIAMMCFSLFGFTTVGFMCYLLIIIPLLYHFQIEAGLVPITVLVTHLIAKKSIALPIL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF +GTS ALL N YM + Q+I YH++VE LK IL RFE FL G G+N+
Sbjct: 121 SNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLKGILYRFESFLLEGKGQNEGL 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LIK LD IL +AL+LVY + N LF QTNY +HYFEMR+ QNR+L MA N++ +
Sbjct: 181 LIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVSTLMRQSK 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ES++L+ LF +TA QLS++NPA L+D+I+ L FR LP+TR+EFE RA+L QLL+D
Sbjct: 241 ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQD 300
Query: 301 LETFIELKVDFYRNYQEE 318
LE FI LKV+FY++YQ +
Sbjct: 301 LERFILLKVEFYQDYQND 318
>gi|21910425|ref|NP_664693.1| hypothetical protein SpyM3_0889 [Streptococcus pyogenes MGAS315]
gi|28896001|ref|NP_802351.1| hypothetical protein SPs1089 [Streptococcus pyogenes SSI-1]
gi|21904623|gb|AAM79496.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28811251|dbj|BAC64184.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 318
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 160/318 (50%), Positives = 213/318 (66%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M ++RT+K+ LAT +A +A L L Y+ SAGIIA+LSV DTR+S+ +A NR LS L
Sbjct: 1 MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A I + F GF Y+ I +PL + E G+ P TVLVT+L+ +KS + +L
Sbjct: 61 AFGIAMMCFSLFGFTTVGFMCYLLIIIPLLYHFQIEAGLVPITVLVTYLIAKKSIALPIL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE LF +GTS ALL N YM + Q+I YH++VE LK IL RFE FL G G+N+
Sbjct: 121 SNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLKGILYRFESFLLEGKGQNEGL 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
LIK LD IL +AL+LVY + N LF QTNY +HYFEMR+ QNR+L MA N+N +
Sbjct: 181 LIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
ES++L+ LF +TA QLS++NPA L+D+I+ L FR LP+TR+EFE RA+L QLL+D
Sbjct: 241 ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQD 300
Query: 301 LETFIELKVDFYRNYQEE 318
LE FI LKV+FY++YQ +
Sbjct: 301 LERFILLKVEFYQDYQND 318
>gi|28211628|ref|NP_782572.1| membrane spanning protein [Clostridium tetani E88]
gi|28204070|gb|AAO36509.1| membrane spanning protein [Clostridium tetani E88]
Length = 318
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 119/314 (37%), Positives = 193/314 (61%), Gaps = 1/314 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M++ RT+K A+ + LA +A +LGL Y+T+AGII ILSV TR+ + K+ R +STLL
Sbjct: 1 MNIGYRTLKTAVGSALAIIVAKWLGLQYATAAGIITILSVGKTRKKSMKIMLKRIISTLL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
AL I ++ F+ GF + +++ +++PLA + E GI S+VLVTHLL EKSTS +
Sbjct: 61 ALLISTVLFNIFGFKEISFGIFLIMFIPLAVKFNVEEGIVVSSVLVTHLLTEKSTSLFWI 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDG-RNDA 179
NE+ L L+G AL+ NLYMP+ + +I Y +EE +K ILLR +K G +
Sbjct: 121 ANEIGLMLVGAVVALIVNLYMPNTEDKIKEYQMYIEEHMKTILLRMSLIMKEGKQCFVNN 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
L++EL+ +L + +L Y++ +N++ + Y++ Y MR+ Q ++ M ++
Sbjct: 181 VLLEELEDVLDKGRKLTYINLNNNIVQEDKYYVRYMNMRKNQIESIKYMLNHFKEDFSKY 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+++I+A+ + A + ++N A +LL+++D FR+ LPKTR+EFE RA L Q L
Sbjct: 241 KQAMIMAKFIEKVANSIYEDNTAENLLEDLDVLREDFRKMELPKTREEFEIRASLFQFLN 300
Query: 300 DLETFIELKVDFYR 313
D+E F+ +K DF +
Sbjct: 301 DMEQFLRIKNDFKK 314
>gi|116873304|ref|YP_850085.1| hypothetical protein lwe1888 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742182|emb|CAK21306.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 327
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 119/316 (37%), Positives = 187/316 (59%), Gaps = 1/316 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A+A LA LA++L L Y+ SAGIIAILSV +T++ + +LA R ST+L
Sbjct: 1 MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
AL I ++ F +G++ + +Y+ I++PLA +L GI S+VLV+H+LLE+S S+
Sbjct: 61 ALTIAAIFFMLIGYNAVSFGLYLLIFIPLAVKLHVADGIVVSSVLVSHILLEQSLSFFWF 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLK-AGDGRNDA 179
NEL L +G A++ NLYMP + E+ +++E +++IL L+ D ++
Sbjct: 121 KNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSDYHDEF 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
L+ +L L A E + N F ++Y+ Y +MR Q RIL M ++ H ++
Sbjct: 181 GLLNQLKGTLDYAQEKAARNLDNQFFSSSHYYSQYVDMRLVQYRILTQMKRHLVAFHHSS 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+S+ LA + +TA+ L + N A DL+ EI + FR LP+TR+EFE RA+L Q +
Sbjct: 241 EQSMALAEITEKTAQTLDEHNTAEDLVAEITTMVHEFRSSKLPETREEFENRAILFQFMN 300
Query: 300 DLETFIELKVDFYRNY 315
DL +E+K DFY +
Sbjct: 301 DLRYLLEMKRDFYAEF 316
>gi|16801049|ref|NP_471317.1| hypothetical protein lin1983 [Listeria innocua Clip11262]
gi|16414484|emb|CAC97213.1| lin1983 [Listeria innocua]
Length = 327
Score = 201 bits (510), Expect = 6e-50, Method: Composition-based stats.
Identities = 119/316 (37%), Positives = 189/316 (59%), Gaps = 1/316 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A+A LA LA++L L Y+ SAGIIAILSV +T++ + +LA R ST+L
Sbjct: 1 MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
AL+I ++ F +G++ + +Y+ I++PLA RL GI S+VLV+H+LLE+S S+
Sbjct: 61 ALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWF 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLK-AGDGRNDA 179
NEL L +G A++ NLYMP + E+ +++E +++IL L+ + ++
Sbjct: 121 KNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSEYLDEF 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
L+ +L L A E + N F ++Y+ Y +MR Q RIL M ++ + H ++
Sbjct: 181 GLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVSFHHSS 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+S+ LA + +TA+ L + N A DL+ EI + FR LP+TR+EFE RA+L Q +
Sbjct: 241 EQSMALAEITEKTAQTLDEHNTAEDLVAEITTMVHEFRSSKLPETREEFENRAILFQFMN 300
Query: 300 DLETFIELKVDFYRNY 315
DL +E+K DFY +
Sbjct: 301 DLRYLLEMKRDFYAEF 316
>gi|16803909|ref|NP_465394.1| hypothetical protein lmo1869 [Listeria monocytogenes EGD-e]
gi|47093251|ref|ZP_00231023.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|153167712|ref|ZP_01927816.1| hypothetical protein LMHG_00638 [Listeria monocytogenes FSL N1-017]
gi|153196376|ref|ZP_01940746.1| hypothetical protein LMRG_01016 [Listeria monocytogenes 10403S]
gi|153202864|ref|ZP_01944302.1| hypothetical protein LMSG_01074 [Listeria monocytogenes HPB2262]
gi|16411323|emb|CAC99947.1| lmo1869 [Listeria monocytogenes]
gi|47018383|gb|EAL09144.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|127633837|gb|EBA23229.1| hypothetical protein LMRG_01016 [Listeria monocytogenes 10403S]
gi|133726811|gb|EBA28509.1| hypothetical protein LMHG_00638 [Listeria monocytogenes FSL N1-017]
gi|133734934|gb|EBA36632.1| hypothetical protein LMSG_01074 [Listeria monocytogenes HPB2262]
Length = 327
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 119/316 (37%), Positives = 185/316 (58%), Gaps = 1/316 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A+A LA LA++L L Y+ SAGIIAILSV +T++ + +LA R ST+L
Sbjct: 1 MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
AL+I ++ F +G++ + +Y+ I++PLA RL GI S+VLV+H+LLE+S S+
Sbjct: 61 ALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWF 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDA- 179
NEL L +G A++ NLYMP + E+ +++E +++IL L+ +D
Sbjct: 121 KNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSEYHDEF 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
L+ +L L A E + N F ++Y+ Y +MR Q RIL M ++ ++
Sbjct: 181 GLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+S+ LA + +TA+ L + N A DL+ EI + FR LP+TR EFE RA+L Q +
Sbjct: 241 EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMN 300
Query: 300 DLETFIELKVDFYRNY 315
DL +E+K DFY +
Sbjct: 301 DLRYLLEMKRDFYAEF 316
>gi|153175098|ref|ZP_01930493.1| hypothetical protein LMIG_00513 [Listeria monocytogenes FSL N3-165]
gi|133729551|gb|EBA31249.1| hypothetical protein LMIG_00513 [Listeria monocytogenes FSL N3-165]
Length = 327
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 185/316 (58%), Gaps = 1/316 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A+A LA LA++L L Y+ SAGIIAILSV +T++ + +LA R ST+L
Sbjct: 1 MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
AL+I ++ F +G++ + +Y+ I++PLA RL GI S+VLV+H+LLE+S S+
Sbjct: 61 ALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWF 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDA- 179
NEL L +G A++ NLYMP + E+ +++E ++++L L+ +D
Sbjct: 121 KNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQVLTEMTQGLRNQSEYHDEF 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
L+ +L L A E + N F ++Y+ Y +MR Q RIL M ++ ++
Sbjct: 181 GLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+S+ LA + +TA+ L + N A DL+ EI + FR LP+TR EFE RA+L Q +
Sbjct: 241 EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMN 300
Query: 300 DLETFIELKVDFYRNY 315
DL +E+K DFY +
Sbjct: 301 DLRYLLEMKRDFYAEF 316
>gi|47096911|ref|ZP_00234489.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|153183357|ref|ZP_01934217.1| hypothetical protein LMOG_00070 [Listeria monocytogenes J0161]
gi|153191371|ref|ZP_01938591.1| hypothetical protein LMPG_00611 [Listeria monocytogenes J2818]
gi|47014724|gb|EAL05679.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|126943648|gb|EBA21365.1| hypothetical protein LMOG_00070 [Listeria monocytogenes J0161]
gi|127765150|gb|EBA25500.1| hypothetical protein LMPG_00611 [Listeria monocytogenes J2818]
Length = 327
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 185/316 (58%), Gaps = 1/316 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A+A LA LA++L L Y+ SAGIIAILSV +T++ + +LA R ST+L
Sbjct: 1 MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
AL+I ++ F +G++ + +Y+ I++PLA RL GI S+VLV+H+LLE+S S+
Sbjct: 61 ALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWF 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDA- 179
NEL L +G A++ NLYMP + E+ +++E ++++L L+ +D
Sbjct: 121 KNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQVLTEMTQGLRNQSEYHDEF 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
L+ +L L A E + N F ++Y+ Y +MR Q RIL M ++ ++
Sbjct: 181 GLLNQLKATLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+S+ LA + +TA+ L + N A DL+ EI + FR LP+TR EFE RA+L Q +
Sbjct: 241 EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMN 300
Query: 300 DLETFIELKVDFYRNY 315
DL +E+K DFY +
Sbjct: 301 DLRYLLEMKRDFYAEF 316
>gi|46908101|ref|YP_014490.1| hypothetical protein LMOf2365_1898 [Listeria monocytogenes str. 4b
F2365]
gi|46881371|gb|AAT04667.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
F2365]
Length = 327
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 119/316 (37%), Positives = 185/316 (58%), Gaps = 1/316 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A+A LA LA++L L Y+ SAGIIAILSV +T++ + +LA R ST+L
Sbjct: 1 MRIGMRTMKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
AL+I ++ F +G++ + +Y+ I++PLA RL GI S+VLV+H+LLE+S S+
Sbjct: 61 ALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWF 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDA- 179
NEL L +G A++ NLYMP + E+ +++E +++IL L+ +D
Sbjct: 121 KNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSEYHDEF 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
L+ +L L A E + N F ++Y+ Y +MR Q RIL M ++ ++
Sbjct: 181 GLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSS 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+S+ LA + +TA+ L + N A DL+ EI + FR LP+TR EFE RA+L Q +
Sbjct: 241 EQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHEFRSSKLPETRAEFENRAILFQFMN 300
Query: 300 DLETFIELKVDFYRNY 315
DL +E+K DFY +
Sbjct: 301 DLRYLLEMKRDFYAEF 316
>gi|15895749|ref|NP_349098.1| Predicted membrane, YQJA B.subtilis ortholog [Clostridium
acetobutylicum ATCC 824]
gi|15025504|gb|AAK80438.1|AE007747_7 Predicted membrane, YQJA B.subtilis ortholog [Clostridium
acetobutylicum ATCC 824]
Length = 320
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 114/310 (36%), Positives = 181/310 (58%), Gaps = 1/310 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K AL +A +A+FLGL Y+ +AGII ILSV +T++++ +A R STLLAL I
Sbjct: 7 RTLKTALGAAIAIIIAEFLGLKYAAAAGIITILSVQNTKKTSIIIAFQRLASTLLALIIS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
+ F G++ + VY+AI++PL GI S+VLVTH+L+EK+ S L NEL
Sbjct: 67 CIIFMIFGYNPISFGVYLAIFIPLTVLFKLTEGIAVSSVLVTHILVEKTISVFWLKNELL 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKA-GDGRNDAALIKE 184
L ++G A+L N YMP + I ++E +KKILL L+ + +L E
Sbjct: 127 LMVVGAGIAILLNTYMPKIDKRIKENQIEIENLMKKILLNMARELRGEAIQTENLSLFSE 186
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
L ++ E Y + +N++ Y++ Y EMR Q IL+ M ++ +++ ++ +
Sbjct: 187 LSKAIKSGSERAYRNLNNNIIVSDKYYVMYMEMRNMQFEILKYMRNHFTKFYMSFEQTKL 246
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
+A + + +QL +ENP L++++ F+E+ LP+TR+EFE RA+L Q L DLE F
Sbjct: 247 VADITEKIGEQLHEENPVDTLIEDLRELFKTFKEQKLPETREEFENRALLFQFLNDLEYF 306
Query: 305 IELKVDFYRN 314
+E+K F +N
Sbjct: 307 LEIKRKFIKN 316
>gi|29376438|ref|NP_815592.1| hypothetical protein EF1910 [Enterococcus faecalis V583]
gi|29343902|gb|AAO81662.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 319
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 1/314 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A++ LA +A+ LGL Y+ SAGII++LSVT T++++ R LS L
Sbjct: 1 MKIGLRTVKTAISAALAMIIAEKLGLLYAPSAGIISVLSVTSTKKTSVMTGIYRLLSLAL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A + + F FLGF A +++ +++P A GI S+VLVTH L+EK+ SW+++
Sbjct: 61 ATILAYICFTFLGFTAIAFGIFLLLFIPAAVYFQLSDGIVVSSVLVTHYLVEKNLSWAII 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDG-RNDA 179
GNE L IG ALLAN YMP ++ + E +E +KIL L G RN
Sbjct: 121 GNEFLLMSIGVGLALLANSYMPDTEKRLREDQEVIETMFRKILREMALHLNNAAGERNLV 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
+L T ++ N L Y++ YF MR+ Q+ IL++M + + + A
Sbjct: 181 MHCADLKTFIRTGETWAKNHAENQLLSTNTYYLEYFAMRKMQSNILKNMLELLEDITVDA 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+ + +L TA+ ++ N +++++ I +R +PLP+TR EFE RA L Q L+
Sbjct: 241 QQVRYIQQLLEYTAETFAENNDGQEIMNRIKTVYETYRTKPLPQTRSEFENRARLFQFLQ 300
Query: 300 DLETFIELKVDFYR 313
++FI++K DF +
Sbjct: 301 LFQSFIQVKADFAK 314
>gi|89207949|ref|ZP_01186476.1| Protein of unknown function DUF939, bacterial [Bacillus
weihenstephanensis KBAB4]
gi|89154127|gb|EAR74169.1| Protein of unknown function DUF939, bacterial [Bacillus
weihenstephanensis KBAB4]
Length = 322
Score = 181 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 99/306 (32%), Positives = 171/306 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K AL T A ++A LGL + +SAGI+ IL V +T+R + +++ +RFL+ +L++
Sbjct: 7 RTVKTALGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSVQVSLHRFLACVLSMVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A++V + ++P A + GI S+V+V HL K +WS++GNE+A
Sbjct: 67 FCIFETIGYTPLAISVLLLTFIPTAVMCKIQEGIVTSSVIVMHLYSLKQITWSIVGNEIA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS + ++ Y ++EE + IL +L+ D A + E
Sbjct: 127 ILTIGISVALLVNMYMPSSENKLKEYQGKIEEHFRTILFEMVVYLRNRDSNWSGAELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ +L++A +L + N + +Y+ YF+MR Q IL+ M + ++ ++
Sbjct: 187 EMMLKEAKDLSFKKLENEFMREDDYYYRYFDMRMQQFEILERMIPLAASLSWTYEQADMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + + E+ L ++ VFRE PLP +R+EFE RA L+QL+ ++E ++
Sbjct: 247 ADVIENIGNSIRPESTGVISLRQLQEMREVFREMPLPVSREEFEIRAKLVQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|110802471|ref|YP_698845.1| hypothetical protein CPR_1527 [Clostridium perfringens SM101]
gi|110682972|gb|ABG86342.1| conserved hypothetical protein [Clostridium perfringens SM101]
Length = 316
Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 171/308 (55%), Gaps = 1/308 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT K + +A +A LGL+Y SAGII ILS+ T+R + K+A R S ++AL +
Sbjct: 7 RTWKTGIGAVIAMIIAKELGLSYWVSAGIITILSIQSTKRESLKIAIKRIESVIIALIVS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S+ F LGF+ +YI +++PL +L GI S+VLVTHLL+EK + + NEL
Sbjct: 67 SVLFLALGFNSVVFGLYILVFIPLTVKLKVTDGIVVSSVLVTHLLVEKQVNSYWIINELG 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGD-GRNDAALIKE 184
L L+G AL+ N YMP +++I + + E++K+I + Y L+ + L E
Sbjct: 127 LMLVGVLVALILNSYMPKNEEKIKEDIDYISEKIKEIFMDMAYSLRTHSVSIKEQRLFDE 186
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
L+ ++ A + + +N+LF Y++HY +MR+ Q +IL+ M + + + ++ +
Sbjct: 187 LENRIELAKKRANDNFNNYLFSDVKYYVHYIDMREVQFQILKYMREHFSRISITVKQTEL 246
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
+A + A + +E L++ ++ E+ LP TR+EFE RAML Q + DLE F
Sbjct: 247 VANFTEEVASVIGKEVNVNILINRLNRLKKELSEQELPVTREEFENRAMLFQFINDLEIF 306
Query: 305 IELKVDFY 312
I+ K Y
Sbjct: 307 IKTKNQCY 314
>gi|18310539|ref|NP_562473.1| hypothetical protein CPE1557 [Clostridium perfringens str. 13]
gi|110801391|ref|YP_696242.1| hypothetical protein CPF_1808 [Clostridium perfringens ATCC 13124]
gi|18145220|dbj|BAB81263.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110676038|gb|ABG85025.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
Length = 316
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 171/308 (55%), Gaps = 1/308 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT K + +A +A LGL+Y SAGII ILS+ T+R + K+A R S ++AL +
Sbjct: 7 RTWKTGIGAVIAMIIAKELGLSYWVSAGIITILSIQSTKRESLKIAIKRIESVIIALIVS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S+ F LGF+ +Y+ +++PL +L GI S+VLVTHLL+EK + + NEL
Sbjct: 67 SVLFLALGFNSVVFGLYLLVFIPLTVKLKVTDGIVVSSVLVTHLLVEKQVNSYWIINELG 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGD-GRNDAALIKE 184
L L+G AL+ N YMP +++I + + E++K+I + Y L+ + L E
Sbjct: 127 LMLVGVLVALILNSYMPKNEEKIKEDIDYISEKIKEIFMDMAYSLRTHSVSIKEQRLFDE 186
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
L+ ++ A + + +N+LF Y++HY +MR+ Q ++L+ M + + + ++ +
Sbjct: 187 LENRIELAKKRANDNFNNYLFSDVKYYVHYIDMREVQFQMLKYMREHFSRISITVKQTEL 246
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
+A + A + +E L++ ++ E+ LP TR+EFE RAML Q + DLE F
Sbjct: 247 VANFTEEVASVIGKEVNVNILINRLNRLKKELSEQELPVTREEFENRAMLFQFINDLEIF 306
Query: 305 IELKVDFY 312
I+ K Y
Sbjct: 307 IKTKNQCY 314
>gi|52141348|ref|YP_085482.1| hypothetical protein BCZK3902 [Bacillus cereus E33L]
gi|51974817|gb|AAU16367.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 322
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 97/306 (31%), Positives = 170/306 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ T A ++A LGL + +SAGI+ IL V +T+R + +++ +RFL+ +L++
Sbjct: 7 RTVKTAIGTGAAVFIAQLLGLGFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A++V + ++P A L + GI S+V+V HL K +W ++GNE+A
Sbjct: 67 FCIFETIGYTPLAISVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS + ++ Y E++E K IL +L+ + A + E
Sbjct: 127 ILTIGISVALLVNMYMPSSENKLKEYQEKIENNFKTILFEMVVYLRNRESSWSGAELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ +L +A +L + N + +Y+ YF MR Q IL+ M + ++ ++
Sbjct: 187 EQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTYEQADMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + +S ++ L ++ +FR+ PLP TR+EFE RA L+QL+ ++E ++
Sbjct: 247 ADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|152976557|ref|YP_001376074.1| protein of unknown function DUF939 [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152025309|gb|ABS23079.1| protein of unknown function DUF939 [Bacillus cereus subsp.
cytotoxis NVH 391-98]
Length = 322
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 172/306 (56%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ T +A ++A GL + +SAGI+ IL V +T+R + +++ +RFL+ +L++A
Sbjct: 7 RTVKTAVGTGIAVFVAQLFGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMAFS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A+++ + ++P A + GI S+V+V HL K +WS +GNE+A
Sbjct: 67 FCIFETIGYTPLAISLLLLTFIPTAVMCKIQEGIVTSSVIVMHLYSLKHITWSAIGNEVA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS ++++ Y EQVE K IL +L+ + + E
Sbjct: 127 VLTIGISVALLVNMYMPSAEKKLKEYQEQVESNFKTILFEIAAYLRNRESTWSGKELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ IL++A ++ + N + +Y+ YF+MR Q IL+ + + + ++ ++
Sbjct: 187 EEILKRAKDVSFKKLENQFMREDDYYYRYFDMRFQQFEILERIMPLAASLSWSYEQAEMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + + E+ L ++ +FR+ PLP+TR+EFE RA L QL+ ++E ++
Sbjct: 247 AEVIENVGNSIRPESTGLISLRQLQEMRELFRDMPLPETREEFEIRAKLFQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|118479344|ref|YP_896495.1| hypothetical protein BALH_3761 [Bacillus thuringiensis str. Al
Hakam]
gi|118418569|gb|ABK86988.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 322
Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats.
Identities = 97/306 (31%), Positives = 170/306 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ T A ++A LGL + +SAGI+ IL V +T+R + +++ +RFL+ +L++
Sbjct: 7 RTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A++V + ++P A L + GI S+V+V HL K +W ++GNE+A
Sbjct: 67 FCIFETIGYTPLAISVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS + ++ Y E++E K IL +L+ + A + E
Sbjct: 127 ILTIGISVALLVNMYMPSSENKLKEYQEKIENNFKTILFEMVVYLRNRESSWSGAELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ +L +A +L + N + +Y+ YF MR Q IL+ M + ++ ++
Sbjct: 187 ENMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTYEQADMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + +S ++ L ++ +FR+ PLP TR+EFE RA L+QL+ ++E ++
Sbjct: 247 ADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|30022231|ref|NP_833862.1| Integral membrane protein [Bacillus cereus ATCC 14579]
gi|29897788|gb|AAP11063.1| Integral membrane protein [Bacillus cereus ATCC 14579]
Length = 322
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 170/306 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ T A ++A LGL + +SAGI+ IL V +T+R + +++ +RFL+ +L++
Sbjct: 7 RTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A+++ + ++P A L + GI S+V+V HL K +W ++GNE+A
Sbjct: 67 FCIFETIGYTPLAISILLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS + ++ Y +++E K IL +L+ + A + E
Sbjct: 127 ILTIGISVALLVNMYMPSSENKLKEYQDKIESNFKTILFEMVVYLRNRESSWSGAELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ +L +A +L + N + +Y+ YF MR Q IL+ M + ++ ++
Sbjct: 187 ENMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTYEQADMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + +S E+ L ++ +FR+ PLP TR+EFE RA L+QL+ ++E ++
Sbjct: 247 ADVVENIGNAISPESTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|30264226|ref|NP_846603.1| hypothetical protein BA4373 [Bacillus anthracis str. Ames]
gi|47529668|ref|YP_021017.1| hypothetical protein GBAA4373 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187054|ref|YP_030306.1| hypothetical protein BAS4056 [Bacillus anthracis str. Sterne]
gi|65321541|ref|ZP_00394500.1| COG4129: Predicted membrane protein [Bacillus anthracis str. A2012]
gi|30258871|gb|AAP28089.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47504816|gb|AAT33492.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180981|gb|AAT56357.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
Length = 322
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 97/306 (31%), Positives = 170/306 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ T A ++A LGL + +SAGI+ IL V +T+R + +++ +RFL+ +L++
Sbjct: 7 RTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A++V + ++P A L + GI S+V+V HL K +W ++GNE+A
Sbjct: 67 FCIFETIGYTPLAISVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS + ++ Y E++E K IL +L+ + A + E
Sbjct: 127 ILTIGISVALLVNMYMPSSENKLKEYQEKIENNFKTILFEMVVYLRNRESSWSGAELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ +L +A +L + N + +Y+ YF MR Q IL+ M + ++ ++
Sbjct: 187 EQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTYEQADMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + +S ++ L ++ +FR+ PLP TR+EFE RA L+QL+ ++E ++
Sbjct: 247 ADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|42783268|ref|NP_980515.1| hypothetical protein BCE_4222 [Bacillus cereus ATCC 10987]
gi|42739196|gb|AAS43123.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 322
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 97/306 (31%), Positives = 171/306 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ T A ++A LGL + +SAGI+ IL V +T+R + +++ +RFL+ +L++
Sbjct: 7 RTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A++V + ++P A L + GI S+V+V HL K +W ++GNE+A
Sbjct: 67 FCIFETIGYTPLAISVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS + ++ Y +++E K IL +L+ + A + E
Sbjct: 127 ILTIGISVALLVNMYMPSSENKLKEYQDKIESNFKTILFEMVVYLRNRESSWSGAELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ +L +A +L + N + +Y+ YF MR Q IL+ M + ++ ++
Sbjct: 187 EQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTYEQADMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + + +S ++ L ++ +FRE PLP TR+EFE RA L+QL+ ++E ++
Sbjct: 247 ADVVENISNAISPQSTGVISLRQLQEMRELFREMPLPATREEFEIRAKLVQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|47568213|ref|ZP_00238917.1| integral membrane protein [Bacillus cereus G9241]
gi|47555203|gb|EAL13550.1| integral membrane protein [Bacillus cereus G9241]
Length = 322
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 170/306 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ T A ++A LGL + +SAGI+ IL V +T+R + +++ +RFL+ +L++
Sbjct: 7 RTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A++V + ++P A L + GI S+V+V HL K +W ++GNE+A
Sbjct: 67 FCIFETIGYTPFAISVLLLTFIPTAVMLKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS + ++ Y +++E K IL +L+ + A + E
Sbjct: 127 ILTIGISVALLVNMYMPSSENKLKEYQDKIESNFKTILFEMVVYLRNRESSWSGAELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ +L +A +L + N + +Y+ YF MR Q IL+ M + ++ ++
Sbjct: 187 ENMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTYEQADMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + +S ++ L ++ +FR+ PLP TR+EFE RA L+QL+ ++E ++
Sbjct: 247 ADVVENIGNAISPQSTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|154686656|ref|YP_001421817.1| YqjA [Bacillus amyloliquefaciens FZB42]
gi|154352507|gb|ABS74586.1| YqjA [Bacillus amyloliquefaciens FZB42]
Length = 317
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 98/306 (32%), Positives = 159/306 (51%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K AL T LA +LA L L SAGII IL + T++ + + + RF + LLA+
Sbjct: 7 RTLKTALGTALAIYLAQLLHLQNFASAGIITILCIQITQKRSLQASWARFAACLLAIVFS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
+ F +G++ A+ + + +++P L GI S+V++ HL + + + + NE
Sbjct: 67 YVFFGLIGYYPFAIGILLVLFIPTTVVLKINEGIVTSSVIILHLYMSGGITMAFIWNEFQ 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L +G ALL NLYMPS +++ +Y +++E+ I E +L G+ I E
Sbjct: 127 LITVGIGVALLMNLYMPSLDRKLAAYRKKIEDNFSVIFAEIERYLLTGEQDWSGKEIPET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
++Q+A L Y D NH+ N + HYF+MRQ Q I++ + I + + + I+
Sbjct: 187 HQMIQEAKNLAYRDVQNHILRHENLYYHYFKMRQKQFEIIERLLPKITSISITVEQGKII 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + + + N A L + T F E PLP TR+EFE RA L LL ++E ++
Sbjct: 247 AHFIHELREAIHPGNTAHKFLKRLAEMRTEFEEMPLPATREEFEARAALFHLLGEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 VIKSYF 312
>gi|148379049|ref|YP_001253590.1| membrane protein [Clostridium botulinum A str. ATCC 3502]
gi|153932597|ref|YP_001383432.1| hypothetical protein CLB_1100 [Clostridium botulinum A str. ATCC
19397]
gi|153935096|ref|YP_001386979.1| hypothetical protein CLC_1112 [Clostridium botulinum A str. Hall]
gi|148288533|emb|CAL82613.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
gi|152928641|gb|ABS34141.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931010|gb|ABS36509.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 331
Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats.
Identities = 108/309 (34%), Positives = 177/309 (57%), Gaps = 1/309 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ +A +A LGL YS SAGII ILS+ +T+R + +A R ++ LLAL I
Sbjct: 7 RTLKTAIGATIAMSIAGALGLKYSVSAGIITILSIQNTKRKSLSVAIQRMIACLLALTIS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S+ F LG + +++ +++PLA + + GI ++VL TH+L EK S +L NE+
Sbjct: 67 SVLFTMLGHNAIVFGLFLLVFIPLAVKFNLQEGIVVNSVLATHILAEKHISINLFINEIL 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKA-GDGRNDAALIKE 184
L IG ALL NLYMPS ++EI +EE++K+IL++ L+ + L +
Sbjct: 127 LMFIGAGIALLLNLYMPSIEKEIWEDQFYIEEKMKEILIQMSIALRELSVSLKEDKLFND 186
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
L+ L +A + Y++ +N+ +Y+ Y EMR Q L+ M + + + ++ +
Sbjct: 187 LEERLFKAKKRAYINLNNYFLLDVSYYADYMEMRIQQFETLKKMRQHFHKFFMTYEQTEM 246
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
+A + A L +EN DLL ++++ F++ LP TR+EFE RA+L Q L D+E F
Sbjct: 247 IADFTKKVADSLHEENTGDDLLLDLEDLRGSFKKMNLPSTREEFENRALLFQFLNDMEQF 306
Query: 305 IELKVDFYR 313
+ +K +F +
Sbjct: 307 LIIKNEFKK 315
>gi|49478845|ref|YP_038214.1| hypothetical protein BT9727_3895 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49330401|gb|AAT61047.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 322
Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats.
Identities = 95/306 (31%), Positives = 169/306 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ T A ++A LGL + +SAGI+ IL V +T+R + +++ +RFL+ +L++
Sbjct: 7 RTVKTAIGTGAAVFIAQLLGLEFYSSAGILVILCVQNTKRKSLQVSLHRFLACVLSMVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+ A++V + ++P A + GI S+V+V HL K +W ++GNE+A
Sbjct: 67 FCIFETIGYTPLAISVLLLTFIPTAVMFKIQEGIVTSSVIVMHLYSLKQITWLIVGNEIA 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ IG S ALL N+YMPS + ++ Y +++E K IL +L+ + A + E
Sbjct: 127 ILTIGISVALLVNMYMPSSENKLKEYQDKIESNFKTILFEMVVYLRNRESSWSGAELIET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ +L +A +L + N + +Y+ YF MR Q IL+ M + ++ ++
Sbjct: 187 EQMLNEARDLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTYEQADMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + +S ++ L ++ +FR+ PLP TR+EFE RA L+QL+ ++E ++
Sbjct: 247 ADVVENIGNAISPQSTGVISLRQLHEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 LIKSRF 312
>gi|153941329|ref|YP_001390417.1| hypothetical protein CLI_1151 [Clostridium botulinum F str.
Langeland]
gi|152937225|gb|ABS42723.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
Length = 331
Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 108/309 (34%), Positives = 177/309 (57%), Gaps = 1/309 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ +A +A LGL YS SAGII ILS+ +T+R + +A R ++ LLAL I
Sbjct: 7 RTLKTAIGATIAMSIAGALGLKYSVSAGIITILSIQNTKRKSLSVAIQRMIACLLALTIS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S+ F LG + +++ +++PLA + + GI ++VL TH+L EK S +L NE+
Sbjct: 67 SVLFTMLGHNAIVFGLFLLVFIPLAVKFNLQEGIVVNSVLATHILAEKYISINLFINEIL 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKA-GDGRNDAALIKE 184
L IG ALL NLYMPS ++EI +EE++K+IL++ L+ + L +
Sbjct: 127 LMFIGAGIALLLNLYMPSIEKEIWEDQFYIEEKMKEILVQMSIALRELSVSLKEDKLFND 186
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
L+ L +A + Y++ +N+ +Y+ Y EMR Q L+ M + + + ++ +
Sbjct: 187 LEERLFKAKKRAYINLNNYFLLDVSYYADYMEMRIQQFETLKKMRQHFHKFFMTYEQTEM 246
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
+A + A L +EN DLL ++++ F++ LP TR+EFE RA+L Q L D+E F
Sbjct: 247 IADFTKKVADSLHEENTGDDLLLDLEDLRGSFKKMNLPNTREEFENRALLFQFLNDMEQF 306
Query: 305 IELKVDFYR 313
+ +K +F +
Sbjct: 307 LIIKNEFKK 315
>gi|56963515|ref|YP_175246.1| hypothetical protein ABC1750 [Bacillus clausii KSM-K16]
gi|56909758|dbj|BAD64285.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 327
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 175/314 (55%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ +A +A+ L L Y++SA II IL ++ TR+++ ++ RF++ ++ + +
Sbjct: 8 RTLKTAVGVVIALSMAEALKLDYASSAAIITILCISVTRKNSLLVSWARFVACMIGIVMS 67
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
++ F LG+ + ++I +++P+ GI S+V+V HL +K +++ NEL
Sbjct: 68 AVMFETLGYKPIIVGLFILLFIPVVLVAKSAQGIVTSSVIVMHLYTQKQATFAFFLNELQ 127
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L +IG ALL NLYMPS+ + Y + E++L IL F++ G+ D I E
Sbjct: 128 LIVIGIGTALLMNLYMPSKDNVLRRYRIEFEQKLAVILRELAAFIREGESDWDGKEISEA 187
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
D +L+++ + NHL + +++ HYF MR+ Q I++ + ++ + A +S +
Sbjct: 188 DHLLKESKTIALQAMENHLLREEDHYYHYFAMREKQLEIIERIMPHLASLEGAVMQSEPI 247
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A S+ + +S N + ++ FR PLP TR+EFETR+ LL ++ + E ++
Sbjct: 248 AEFLSELSAAVSPTNSVPYFMLRLEELKAAFRAMPLPATREEFETRSSLLYVMNEFEQYL 307
Query: 306 ELKVDFYRNYQEER 319
++K + N Q+++
Sbjct: 308 QVKDALWSNKQDKK 321
>gi|16079451|ref|NP_390275.1| hypothetical protein BSU23950 [Bacillus subtilis subsp. subtilis
str. 168]
gi|1731065|sp|P54538|YQJA_BACSU Uncharacterized protein yqjA
gi|1303952|dbj|BAA12607.1| YqjA [Bacillus subtilis]
gi|2634829|emb|CAB14326.1| yqjA [Bacillus subtilis subsp. subtilis str. 168]
Length = 322
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 95/306 (31%), Positives = 157/306 (51%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RTIK AL T LA +++ L L SAGII IL + T++ + + + RF + LA+A
Sbjct: 7 RTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQASWARFWACCLAIAFS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
L F +G+H + + I++P+ L GI S+V++ HL + + + + NE+
Sbjct: 67 YLFFELIGYHPFVIGALLLIFIPITVLLKINEGIVTSSVIILHLYMSGGITPTFIWNEVQ 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L +G ALL NLYMPS +++ +Y +++E+ I E +L G+ I E
Sbjct: 127 LITVGIGVALLMNLYMPSLDRKLIAYRKKIEDNFAVIFAEIERYLLTGEQDWSGKEIPET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
++ +A L Y D NH+ N H HYF+MR+ Q I++ + + + + + ++
Sbjct: 187 HQLITEAKNLAYRDVQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITVDQGKMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + + N A L + + F E PLP TR+EFE RA L LL ++E ++
Sbjct: 247 AEFIHDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLGEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 VIKSYF 312
>gi|106886220|ref|ZP_01353565.1| Protein of unknown function DUF939 [Clostridium phytofermentans
ISDg]
gi|106766284|gb|EAT23018.1| Protein of unknown function DUF939 [Clostridium phytofermentans
ISDg]
Length = 326
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 164/312 (52%), Gaps = 1/312 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + K+A+ + LA LA+ +GL YS SAGII +L++ DT++ T ++ R ++ +
Sbjct: 1 MKKFNKVSKIAVGSTLAILLANAIGLNYSISAGIITLLTIQDTKKETIFISLKRLVAFMF 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A + L F GF +++ ++V + + GI ++VL TH +L +S S S++
Sbjct: 61 ATILALLLFPNFGFTTIPFGLFLFLFVGGCSIVKLQDGIAMNSVLATHYILSESISISMI 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRN-DA 179
NE L IG L NL+MPS +I E++E L+KIL R YFL+ D N
Sbjct: 121 TNEALLLFIGAGIGTLINLFMPSNVAKIREVQERIEADLRKILFRMAYFLRESDKSNYKD 180
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
L + L Y + +N LF ++ Y I Y EMR+ Q +IL ++ I + H
Sbjct: 181 HCFTPLKEDINLGLTYAYTNMNNTLFQESEYFIRYMEMRKHQLQILAEIYEKIISLHAVP 240
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
+ L +++ A L++ N A+ LL +R+ PLP TR+EFE RA+L +L+
Sbjct: 241 KQVLPISQFIESIANSLAESNNAKGLLQLEKTLEEEYRQSPLPTTREEFEDRAVLFMILK 300
Query: 300 DLETFIELKVDF 311
D + F+ +K F
Sbjct: 301 DFKMFLLIKEQF 312
>gi|116494611|ref|YP_806345.1| Predicted membrane protein [Lactobacillus casei ATCC 334]
gi|116104761|gb|ABJ69903.1| Predicted membrane protein [Lactobacillus casei ATCC 334]
Length = 321
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 2/313 (0%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A+ T A +A L L Y T+AGII ILSV +T +++ +L R L+T+L
Sbjct: 1 MHIGMRTVKTAVGTAAAMLIAYELHLEYWTAAGIITILSVQNTTKASFRLVAYRLLATVL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
I AF LG++ A +++ I++PL + GI + VLVTH ++ KS SW +
Sbjct: 61 GFVIAIGAFLVLGYNALAFGLFLLIFIPLTNVFAVQSGIVMTAVLVTHFMMAKSCSWFWI 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAG--DGRND 178
NEL L ++G AL+ANL+MPS + +I + QVE ++++IL L ++
Sbjct: 121 KNELLLLVVGAGVALIANLFMPSLEAKITEFQAQVEAEMREILDHMSQQLGPDHIKSADN 180
Query: 179 AALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLA 238
A + +L L A+ N L +Y YFEMR Q +L+ M +++
Sbjct: 181 WANLSDLKMTLDAAVAWANRHSDNQLLADNDYFQAYFEMRDNQYELLRQMQDSLDRIETP 240
Query: 239 ASESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLL 298
++ +++ + TA L+++NPA L+ + F + LP R FE+RA L L
Sbjct: 241 VEQAAVISDALAMTASVLTEDNPATQLVTMVKKIQRDFAKSALPTDRASFESRARLFYFL 300
Query: 299 RDLETFIELKVDF 311
D ++LK +F
Sbjct: 301 EDFSRLLQLKRNF 313
>gi|156866716|gb|EDO60088.1| hypothetical protein CLOLEP_02905 [Clostridium leptum DSM 753]
Length = 327
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 100/306 (32%), Positives = 165/306 (53%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
+ IK+++ C A +LAD++GL +TSAGIIA+LS+ +T++ T +AG R + +A+AI
Sbjct: 8 KIIKISIGCCFAVFLADWIGLRSATSAGIIALLSIQNTKKETLTIAGKRISAFFIAVAIA 67
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F G+HL + ++ ++ + L E G++ STVLVTH S ++L+ NE
Sbjct: 68 YALFTLWGYHLFSFGFFLLLFTFACYLLKLETGVSMSTVLVTHFWTAHSFHYTLIINEFL 127
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L IG A++ NLYMP I E+++ +K+ILL+ L G + A + L
Sbjct: 128 LLCIGVGIAVVINLYMPRMIHIIKQDQEEIDNSMKQILLQMSSSLIHGHEIDLEADFQFL 187
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
L QAL Y +N L Y++ + E+R+ Q +L+ + N+ S++ +
Sbjct: 188 QNRLSQALAHAYQYMNNTLSSDMRYYVRFIELRKNQQGLLKRVYRNLLKIQFVPSQAFPV 247
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
+R + A+ + N A LL + ++ PLP+TR+EFE RA+L Q+ DLE +
Sbjct: 248 SRFMKRIAESMQDYNNAEFLLSILSEMRKFYKTTPLPQTREEFEARAVLYQIAADLEALV 307
Query: 306 ELKVDF 311
+K F
Sbjct: 308 LVKQSF 313
>gi|89099285|ref|ZP_01172163.1| YqjA [Bacillus sp. NRRL B-14911]
gi|89086131|gb|EAR65254.1| YqjA [Bacillus sp. NRRL B-14911]
Length = 322
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 91/306 (29%), Positives = 159/306 (51%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RTIK A T ++ +A LGL SAGI+ IL + T++ + + RFL+ LL++
Sbjct: 8 RTIKTAAGTAVSIIIAQMLGLNNFVSAGILTILCIQVTKKRSLTASWARFLACLLSMVFS 67
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
++ F + +H + + + ++P A L G+ S+V+ H+ + SLL NEL
Sbjct: 68 TVFFEGIAYHPAVIGLLLLFFIPTAVMLKASEGVVSSSVITLHIYSAGEVTGSLLLNELG 127
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ +G ALLANLYMPS ++++ Y Q+E+ K+I +L+ + D I
Sbjct: 128 IITVGIGVALLANLYMPSLDRKLEKYQLQIEDNFKRIFDEIITYLRTNESDWDGREITGT 187
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+ ++ +A L + D NH N + HYF+MR+ Q I++ + + + L + I+
Sbjct: 188 ERLISEAKTLAFRDVENHFLRNENSYYHYFKMREKQFEIIERVLPTVTSIGLTVEQGEIV 247
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + + + N A L+++ F E LP+TR+EFE RA LL ++++E ++
Sbjct: 248 ADFIEELSNNIHPGNTAIVYLEKLLRMKLSFEESDLPRTREEFEARAALLHFVKEMEQYL 307
Query: 306 ELKVDF 311
+K F
Sbjct: 308 VIKSSF 313
>gi|52080936|ref|YP_079727.1| conserved membrane protein YqjA [Bacillus licheniformis ATCC 14580]
gi|52786311|ref|YP_092140.1| YqjA [Bacillus licheniformis ATCC 14580]
gi|52004147|gb|AAU24089.1| conserved membrane protein YqjA [Bacillus licheniformis ATCC 14580]
gi|52348813|gb|AAU41447.1| YqjA [Bacillus licheniformis DSM 13]
Length = 319
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 91/306 (29%), Positives = 150/306 (49%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K AL T A ++A LGL S GII IL + T++ + + + RF + +LA+
Sbjct: 7 RTLKTALGTASAIYIAQLLGLHNFVSTGIITILCIQVTKKRSLQASWARFAACILAIVFS 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
F +G+H + + + ++P L + GI S+V++ HL + + + SL+ NE
Sbjct: 67 YAFFELIGYHPAVIGLMLLFFIPTTVLLKIKEGIVTSSVIILHLYMSEGITLSLVWNEFL 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
+ + G ALL NLYMPS +E+ Y +++E+ KI E +L G+ I E
Sbjct: 127 IIITGIGVALLMNLYMPSLDKELKQYQQKIEDNFAKIFEEIERYLLTGEQDWTGKEIPET 186
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
++ +A L Y D NH N + HYF+MR+ Q I++ + I + + + ++
Sbjct: 187 HRLINEAKTLAYRDVENHFLRHENLYYHYFKMREKQFEIIERVLPKITSISMTVEQGQMI 246
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A + N A L + E LP TR+EFE RA L L ++E ++
Sbjct: 247 AAFLHDLRGAIHPGNTAHKFLKRLVKMREEIEEMELPTTREEFEARAALFIFLGEMEQYL 306
Query: 306 ELKVDF 311
+K F
Sbjct: 307 VIKSYF 312
>gi|149181894|ref|ZP_01860383.1| YqjA [Bacillus sp. SG-1]
gi|148850433|gb|EDL64594.1| YqjA [Bacillus sp. SG-1]
Length = 330
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 168/316 (53%), Gaps = 1/316 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT K A+ T +A +A + GL SAGI+ IL + DT++ + K A +RFL+ +LA+
Sbjct: 7 RTAKTAVGTAIAILIAQWFGLENFASAGILTILCIQDTKKKSLKAAWSRFLACILAIVFA 66
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S+ F L +H + + + ++P L GI S+V++ H+ ++ + L+ NEL
Sbjct: 67 SILFELLFYHPIIIGLLLLFFIPTTVMLKITQGIVTSSVIILHVYSAQNVTVDLIVNELG 126
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAAL-IKE 184
+ IG ALLANLYMPS + ++ +Y EQ+EE +I +L+ + + A I E
Sbjct: 127 IISIGIGIALLANLYMPSVENKLIAYQEQIEENFHRIFTEIVRYLRTNEDKGWAGKEITE 186
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
++ ++ +A L + D NH + + YF+MR+ Q ILQ + + + + +
Sbjct: 187 VEKLINEAKTLAFKDVENHFLRHESLYYLYFKMREKQFDILQRLLPLVTSISSKVEQRKM 246
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
+A + ++ + N A L ++ + F E LP+TR+EFE RA L Q L+++E +
Sbjct: 247 VADFMEELSEHIHPGNTALLYLKKLYDMKVKFEEMELPQTREEFEARAALYQFLKEMEDY 306
Query: 305 IELKVDFYRNYQEERN 320
+ +K F Q + N
Sbjct: 307 LLIKSSFKGIRQRKEN 322
>gi|15614027|ref|NP_242330.1| hypothetical protein BH1464 [Bacillus halodurans C-125]
gi|10174081|dbj|BAB05183.1| BH1464 [Bacillus halodurans C-125]
Length = 326
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 87/307 (28%), Positives = 163/307 (53%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K AL ++ ++A L L + SA I+ IL ++ +R+ + + A RF + ++ LA
Sbjct: 8 RTLKTALGAGISIFIAQALNLEFYASAAILTILCISVSRKGSLRAAWQRFAACMIGLAYS 67
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
+ +G+ LA+ + +++P RL + GIT STV++ H+ + SW++ NE
Sbjct: 68 FILLELVGYQPWTLALILILFIPTVVRLNVKEGITTSTVIMLHVYTLGTVSWAIFINEFL 127
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L +IG AL+ N YMP+ ++E+ + ++E + IL +++ G+ D I E
Sbjct: 128 LIVIGIGVALIMNAYMPNIERELRKHQRKIEANFRTILRELACYVRTGEREWDGREIPET 187
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLIL 245
+Q+A + + +NH + + HYF+MR+ Q IL+ + +++ +S +
Sbjct: 188 ADEIQKAKSIAMRNINNHFLRNEDQYYHYFKMRERQFDILERIMPFLSSLDDTVVQSDKI 247
Query: 246 ARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFI 305
A L + ++ +S N I + + F R LPKT++EFETR+ L ++ +LE ++
Sbjct: 248 ADLLEELSEAVSPVNTVSYFQGRIQDIRSYFEARELPKTQKEFETRSALYYVIHELEEYL 307
Query: 306 ELKVDFY 312
+K Y
Sbjct: 308 RMKESLY 314
>gi|56420888|ref|YP_148206.1| hypothetical protein GK2353 [Geobacillus kaustophilus HTA426]
gi|56380730|dbj|BAD76638.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 324
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 92/312 (29%), Positives = 161/312 (51%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RT+K A+ LA +A +GL SAGII IL V T++ + + A RF + ++
Sbjct: 1 MKIGYRTLKTAVGAALAIAIAQLIGLHNFASAGIIVILCVQVTKKRSLETARARFAACVV 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A+ +L F G+H + + + +++P+ RL GI S+V++ HL + +W L+
Sbjct: 61 AIGFAALFFAVFGYHPWTIGLLLLLFIPVTVRLKINEGIATSSVIILHLYAAQDITWGLV 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
NE+ L +G ALL N+YMPS ++E+ Y VE+ + IL +L+ + D
Sbjct: 121 ANEILLVAVGIGVALLMNMYMPSAEKELKEYQRIVEDLFRIILKEIVRYLRTNELDWDGK 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
+ L +A +L N L+ + ++ YF MR+ Q I++ M + +
Sbjct: 181 ELPLAAETLDKAKKLAMRHADNQLWRNEDEYVRYFRMRERQLEIIEHMLPLVTSLVYTVE 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
+ +++A + + + N A L + F+ PLPKTR++FE RA L L+R+
Sbjct: 241 QRMMVADFIDELSDAIHPGNTADRFLRRLAEMREQFKAMPLPKTREQFEERAALFHLVRE 300
Query: 301 LETFIELKVDFY 312
LE ++ +K +F+
Sbjct: 301 LERYLIIKSEFH 312
>gi|23099317|ref|NP_692783.1| hypothetical protein OB1862 [Oceanobacillus iheyensis HTE831]
gi|22777546|dbj|BAC13818.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 332
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 158/313 (50%)
Query: 1 MSLLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLL 60
M + RTIK A+ T ++ LA F GL SAGI+ IL + +R+ + A RFL+ +L
Sbjct: 1 MKIGYRTIKTAIGTPVSITLAQFFGLTNFVSAGILTILCIQPSRKRSLMSAWQRFLACVL 60
Query: 61 ALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLL 120
A+ + F +G+ ++ + I +++P+ G+ S+V+ +L S + LL
Sbjct: 61 AMIFSFVFFEVIGYTPFSIFIMILLFIPVTVFFKVTPGVASSSVVTLNLYSSSSITGPLL 120
Query: 121 GNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAA 180
++L L IG LL NLYMPS + + S E++EE +IL + +++ D
Sbjct: 121 ADQLLLITIGIGTGLLLNLYMPSLDKMLKSNQEKLEENFSRILYEYSLYIRDKDSSWKGE 180
Query: 181 LIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAAS 240
I + IL +A LV D NHL + + YF+MR+ Q +L+ M + +
Sbjct: 181 EITNTEDILAKANTLVQRDRENHLLRSDHTYYDYFQMRKRQFELLKKMLPLVTHLPNTDY 240
Query: 241 ESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRD 300
S +A F + + + N A L+E+ F E LP R+EFETR+ L QLL +
Sbjct: 241 ISNRIADFFEKLSTSVHPGNTAILFLEELRQLRRDFHEEDLPTNREEFETRSNLFQLLHE 300
Query: 301 LETFIELKVDFYR 313
+E ++ +K F +
Sbjct: 301 IEEYLIIKNKFKK 313
>gi|150018846|ref|YP_001311100.1| protein of unknown function DUF939 [Clostridium beijerinckii NCIMB
8052]
gi|149905311|gb|ABR36144.1| protein of unknown function DUF939 [Clostridium beijerinckii NCIMB
8052]
Length = 321
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 87/317 (27%), Positives = 177/317 (55%), Gaps = 1/317 (0%)
Query: 3 LLQRTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLAL 62
L +T+K+AL+ +A +++++GL + ++GIIAILS+ DT++ + +AG R +++ LA+
Sbjct: 5 LQSKTLKMALSATIAIIISNYVGLQFGVTSGIIAILSIQDTKKESLLVAGRRIIASALAI 64
Query: 63 AIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGN 122
+ + + LG + +++ I++ L E G+ +VL THLL + + S + N
Sbjct: 65 LLSFMLYLLLGNNPIIFGLFLIIFIQTTIILKIEEGMVVGSVLSTHLLTSTNINISWIIN 124
Query: 123 ELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFL-KAGDGRNDAAL 181
E L +IG A++ NLY S +++ + E++E+ + IL L + +
Sbjct: 125 EAQLTVIGIGVAMMFNLYTASLEEQFEKNKERIEDYYRAILSDMAVSLVTQAVPIYEKQI 184
Query: 182 IKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASE 241
++ ++ ++ + + ++NHLF + +Y++ Y EMR Q ++ M + + ++ +
Sbjct: 185 SVSVEELINKSKFMAQIINNNHLFKKNDYYLSYIEMRIIQLDTMKRMKRHFSRFYMTYDQ 244
Query: 242 SLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDL 301
+ IL+ ++ A L ++N +L+D+++ + + LPK R EFE RA+L Q L DL
Sbjct: 245 TRILSEFTNEVAMNLKEDNDCVELIDKLNLLRKDYEKMDLPKNRNEFENRALLFQFLNDL 304
Query: 302 ETFIELKVDFYRNYQEE 318
E F+ +K +F ++Q +
Sbjct: 305 EDFLVIKKEFKESFQNK 321
>gi|68055584|ref|ZP_00539728.1| protein of unknown function DUF939 [Exiguobacterium sibiricum
255-15]
gi|68007897|gb|EAM87138.1| protein of unknown function DUF939 [Exiguobacterium sibiricum
255-15]
Length = 317
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 94/307 (30%), Positives = 166/307 (54%), Gaps = 1/307 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+A LA W+A+ + L Y A IIAILS+ TR+ + + + R ++++LA+ +G
Sbjct: 6 RTLKTAVAAALAMWIAEKMQLDYYVFAAIIAILSIQATRKKSFRSSYERIMASILAIGLG 65
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
+ F +G+ A+A+Y +++PL RL + G S V++THL + + + ++ NE+
Sbjct: 66 FVIFEVIGYRPIAIALYFILFLPLTQRLRLQDGFITSVVILTHLYVAQQLNLAIFLNEIY 125
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L LIG LL N+YMPS + I Q+++++ + ++ G + + E
Sbjct: 126 LLLIGVGVGLLVNMYMPSLDRTIAERRLQIDQRIAALFFEVAAAIETGWINRHSLTLHET 185
Query: 186 DTILQQALELVYLDHSNHLFHQTNYHIH-YFEMRQAQNRILQDMASNINNCHLAASESLI 244
+ +L++ + N + + + + YF MR+ Q +L + N+++ L E
Sbjct: 186 ERLLKEGKDASLKRMGNAIGRRNDDEDYLYFRMREQQFELLNGIVRNVDDLVLVVEEGKK 245
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
+A LF + + A L E++ L FRE PLPKTR EFE R+ LL +L++ E +
Sbjct: 246 VAGLFRTIGDNVRPDADATLFLAELERLLEEFRESPLPKTRDEFEVRSALLHMLQEAEQY 305
Query: 305 IELKVDF 311
++LK F
Sbjct: 306 LQLKQRF 312
>gi|138895937|ref|YP_001126390.1| hypothetical protein GTNG_2296 [Geobacillus thermodenitrificans
NG80-2]
gi|134267450|gb|ABO67645.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 290
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 147/282 (52%)
Query: 38 LSVTDTRRSTAKLAGNRFLSTLLALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEI 97
+ V T++ + + A RF + ++A+ +L F G+H + + + +++P+ RL
Sbjct: 1 MCVQVTKKRSLEAARARFTACVVAIGFAALFFTVFGYHPWTIGLLLLLFIPVTVRLKVNE 60
Query: 98 GITPSTVLVTHLLLEKSTSWSLLGNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEE 157
GI S+V++ HL K +W+L+ NEL L ++G ALL N+YMPS ++++ Y VE+
Sbjct: 61 GIATSSVIILHLYAAKELTWALIVNELLLVIVGIGVALLVNMYMPSAEKQLKEYRRIVED 120
Query: 158 QLKKILLRFEYFLKAGDGRNDAALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEM 217
+ IL +L+ + D + +L+QA +L N L+ + ++ YF M
Sbjct: 121 LFRIILKEVVRYLRTNELDWDGKELPLTADMLEQAKKLAIRHADNQLWRNEDEYVRYFRM 180
Query: 218 RQAQNRILQDMASNINNCHLAASESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFR 277
R+ Q I++ M + + + +++A + + + N A L + F+
Sbjct: 181 RERQLEIIERMLPLVTSLTYTVEQRIMVADFIDELSDAIHPGNTADRFLRRLAAMREEFK 240
Query: 278 ERPLPKTRQEFETRAMLLQLLRDLETFIELKVDFYRNYQEER 319
E PLPKTR++FE RA L L+R+LE ++ +K F+ + E+
Sbjct: 241 EMPLPKTREQFEERAALFHLVRELEQYLIIKSQFHPGNEAEK 282
>gi|73662551|ref|YP_301332.1| hypothetical protein SSP1242 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495066|dbj|BAE18387.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 329
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 148/308 (48%), Gaps = 5/308 (1%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RTIK A+ L +A +GL S+ I+ +L + T+ + + +RF+S + L G
Sbjct: 12 RTIKTAVGMALGIIIAKLIGLDNFASSAILVVLCIKHTKVHSLQAIVSRFVSCFMILIFG 71
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S+AF LG H L + + ++PL + G+ S V++ H+ ++ L NE+
Sbjct: 72 SIAFSLLGQHAIVLGIIVLFFIPLTVVFKVQEGVVTSCVILLHVFNAQTIDLHLFINEIL 131
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALI--K 183
L ++G A L N MPS + Y +Q+E+Q I FE F + N + I K
Sbjct: 132 LLVVGLGIAFLMNSIMPSLDSNLKHYKQQIEQQFTAI---FETFSETCQKTNISIDISFK 188
Query: 184 ELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESL 243
+L +++A + + D NH N + HYF+MR+ Q +L MA I N
Sbjct: 189 QLKFTIRKAKSIAFRDVKNHFVRNENSYYHYFDMREEQLELLHRMALIIENIETKDCMLT 248
Query: 244 ILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLET 303
++ LF++ A ++ + L + E LP T + F TRA LLQLL +LE
Sbjct: 249 KISNLFAEVATNVNSNDYTALRLHSLYEIRLELNEAELPTTHESFRTRASLLQLLNELEA 308
Query: 304 FIELKVDF 311
++ +K F
Sbjct: 309 YLAVKSQF 316
>gi|82751118|ref|YP_416859.1| probable membrane protein [Staphylococcus aureus RF122]
gi|82656649|emb|CAI81075.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 326
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 87/312 (27%), Positives = 154/312 (49%), Gaps = 13/312 (4%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RTIK A+ L ++ LGL S+ I+ +L + T+ + + +R +S L L +G
Sbjct: 12 RTIKTAVGMTLGVIISKLLGLDNYASSAILVVLCIKHTKVHSLQAIISRLVSCFLVLFLG 71
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S F LG L + + +++PL L + G+ S V++ H+ KS L+ NE
Sbjct: 72 SAIFSLLGQSPIVLGIIVLLFIPLTVVLKVQEGVITSCVILLHVFNAKSIDAHLIVNETL 131
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L LIG S A NL MPS +++D Y ++E+Q+ I ++ Y + + + ++ E
Sbjct: 132 LLLIGLSIAFTMNLMMPSLDKQLDEYKCKIEQQIADIFSKYSYICE----KYEDTIVIEF 187
Query: 186 DTIL---QQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINN-CHLAASE 241
+ +L ++A + + D NH N + HYF+MR+ Q +L M I + CH +
Sbjct: 188 EALLLNIKKAKSIAFRDVKNHFVRNENSYYHYFDMREEQVELLMRMKPLIESICH---KD 244
Query: 242 SLI--LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
L+ +A L + ++ + L + E PLP T + +RA ++Q+L
Sbjct: 245 PLLNDVASLLKEIGLNVNSNDYTAMRLHNLYETRLKLDELPLPTTHKALNSRASIIQILN 304
Query: 300 DLETFIELKVDF 311
+LE ++++K F
Sbjct: 305 ELEEYLQIKSQF 316
>gi|27468112|ref|NP_764749.1| hypothetical protein SE1194 [Staphylococcus epidermidis ATCC 12228]
gi|27315658|gb|AAO04793.1|AE016748_27 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
Length = 325
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 85/309 (27%), Positives = 153/309 (49%), Gaps = 7/309 (2%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ L + LGL S+ I+ +L + T+ + + +R +S LL L +G
Sbjct: 12 RTVKTAVGMTLGVIICKLLGLDNYASSAILVVLCIKHTKMHSVQAILSRLVSCLLILFLG 71
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S F LG H L + + +++PL L + G+ S V++ H+ K+ + L+ NE+
Sbjct: 72 SAIFSLLGQHAFVLGLIVLLFIPLTVVLNVQEGVITSCVILLHVFNAKAINGHLILNEIM 131
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L ++G A L NL MPS ++++ + + +E Q+ +I F F +A ND IK
Sbjct: 132 LLIVGLGIAFLMNLMMPSLDKKLNHFKQDIENQITEI---FNIFSQACSMHNDHLNIK-F 187
Query: 186 DTIL---QQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASES 242
D++L ++A L + D NH N HYF+MR+ Q +L+ M S + +
Sbjct: 188 DSLLLNIKKAKSLAFRDVKNHFVRNENSFYHYFDMREEQVELLKRMTSLLERINTDDPIL 247
Query: 243 LILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLE 302
+++L + ++ + L + + PLP T + +RA ++Q+L +LE
Sbjct: 248 EKISQLMYEIGSNVNSNDYTALRLHSLYEIRLSLDDLPLPTTHKTLNSRAHIIQILNELE 307
Query: 303 TFIELKVDF 311
++ +K F
Sbjct: 308 EYLNIKSQF 316
>gi|49483763|ref|YP_040987.1| hypothetical protein SAR1591 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49241892|emb|CAG40586.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 326
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 87/312 (27%), Positives = 153/312 (49%), Gaps = 13/312 (4%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RTIK A+ L ++ LGL S+ I+ +L + T+ + + +R +S L L +G
Sbjct: 12 RTIKTAVGMTLGVIISKLLGLDNYASSAILVVLCIKHTKVHSLQAIISRLVSCFLVLFLG 71
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S F LG L + + +++PL L + G+ S V++ H+ KS L+ NE
Sbjct: 72 SAIFSLLGQSPIVLGIIVLLFIPLTVVLKVQEGVITSCVILLHVFNAKSIDAHLIVNETL 131
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L LIG S A NL MPS +++D Y ++E+Q+ I ++ Y + + + + E
Sbjct: 132 LLLIGLSIAFTMNLMMPSLDKQLDEYKCKIEQQIADIFSKYSYICE----KYEDTIAIEF 187
Query: 186 DTIL---QQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINN-CHLAASE 241
+ +L ++A + + D NH N + HYF+MR+ Q +L M I + CH +
Sbjct: 188 EALLLNIKKAKSIAFRDVKNHFVRNENSYYHYFDMREEQVELLMRMKPLIESICH---KD 244
Query: 242 SLI--LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
L+ +A L + ++ + L + E PLP T + +RA ++Q+L
Sbjct: 245 PLLNDVASLLKEIGLNVNSNDYTAMRLHNLYETRLKLDELPLPTTHKALNSRASIIQILN 304
Query: 300 DLETFIELKVDF 311
+LE ++++K F
Sbjct: 305 ELEEYLQIKSQF 316
>gi|21283195|ref|NP_646283.1| hypothetical protein MW1466 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486350|ref|YP_043571.1| hypothetical protein SAS1452 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650469|ref|YP_186398.1| hypothetical protein SACOL1557 [Staphylococcus aureus subsp. aureus
COL]
gi|87161723|ref|YP_494158.1| hypothetical protein SAUSA300_1462 [Staphylococcus aureus subsp.
aureus USA300]
gi|88195320|ref|YP_500124.1| hypothetical protein SAOUHSC_01609 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221631|ref|YP_001332453.1| hypothetical protein NWMN_1419 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|21204635|dbj|BAB95331.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244793|emb|CAG43233.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284655|gb|AAW36749.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
COL]
gi|87127697|gb|ABD22211.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202878|gb|ABD30688.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374431|dbj|BAF67691.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
Length = 326
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 87/312 (27%), Positives = 153/312 (49%), Gaps = 13/312 (4%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RTIK A+ L ++ LGL S+ I+ +L + T+ + + +R +S L L +G
Sbjct: 12 RTIKTAVGMTLGVIISKLLGLDNYASSAILVVLCIKHTKVHSLQAIISRLVSCFLVLFLG 71
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S F LG L + + +++PL L + G+ S V++ H+ KS L+ NE
Sbjct: 72 SAIFSLLGQSPIVLGIIVLLFIPLTVVLKVQEGVITSCVILLHVFNAKSIDAHLIVNETL 131
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L LIG S A NL MPS +++D Y ++E+Q+ I ++ Y + + + + E
Sbjct: 132 LLLIGLSIAFTMNLMMPSLDKQLDEYKCKIEQQIADIFSKYSYICE----KYEDTIAIEF 187
Query: 186 DTIL---QQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINN-CHLAASE 241
+ +L ++A + + D NH N + HYF+MR+ Q +L M I + CH +
Sbjct: 188 EVLLLNIKKAKSIAFRDVKNHFVRNENSYYHYFDMREEQVELLMRMKPLIESICH---KD 244
Query: 242 SLI--LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
L+ +A L + ++ + L + E PLP T + +RA ++Q+L
Sbjct: 245 PLLNDVASLLKEIGLNVNSNDYTAMRLHNLYETRLKLDELPLPTTHKALNSRASIIQILN 304
Query: 300 DLETFIELKVDF 311
+LE ++++K F
Sbjct: 305 ELEEYLQIKSQF 316
>gi|15924503|ref|NP_372037.1| hypothetical protein SAV1513 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927094|ref|NP_374627.1| hypothetical protein SA1344 [Staphylococcus aureus subsp. aureus
N315]
gi|148267998|ref|YP_001246941.1| protein of unknown function DUF939 [Staphylococcus aureus subsp.
aureus JH9]
gi|150394064|ref|YP_001316739.1| protein of unknown function DUF939 [Staphylococcus aureus subsp.
aureus JH1]
gi|156979832|ref|YP_001442091.1| hypothetical protein SAHV_1501 [Staphylococcus aureus subsp. aureus
Mu3]
gi|13701312|dbj|BAB42606.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247284|dbj|BAB57675.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|147741067|gb|ABQ49365.1| protein of unknown function DUF939 [Staphylococcus aureus subsp.
aureus JH9]
gi|149946516|gb|ABR52452.1| protein of unknown function DUF939 [Staphylococcus aureus subsp.
aureus JH1]
gi|156721967|dbj|BAF78384.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
Length = 326
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 13/312 (4%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RTIK A+ L ++ LGL S+ I+ +L + T+ + + +R +S L L +G
Sbjct: 12 RTIKTAVGMTLGVIISKLLGLDNYASSAILVVLCIKHTKVHSLQAIISRLVSCFLVLFLG 71
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S F LG L + + +++PL L + G+ S V++ H+ KS L+ NE
Sbjct: 72 SAIFSLLGQSPIVLGIIVLLFIPLTVVLKVQEGVITSCVILLHVFNAKSIDAHLIVNETL 131
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L LIG S A NL MPS +++D Y ++E+Q+ I ++ Y + + + + E
Sbjct: 132 LLLIGLSIAFTMNLMMPSLDKQLDEYKCKIEQQIADIFSKYSYICE----KYEDTIAIEF 187
Query: 186 DTIL---QQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINN-CHLAASE 241
+ +L ++A + + D NH N + HYF+MR+ Q +L M I + CH +
Sbjct: 188 EVLLLNIKKAKSIAFRDVKNHFVRNENSYYHYFDMREEQVELLMRMKPLIESICH---KD 244
Query: 242 SLI--LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
L+ ++ L + ++ + L + E PLP T + +RA ++Q+L
Sbjct: 245 PLLNDVSSLLKEIGLNVNSNDYTAMRLHNLYETRLKLDELPLPTTHKALNSRASIIQILN 304
Query: 300 DLETFIELKVDF 311
+LE ++++K F
Sbjct: 305 ELEEYLQIKSQF 316
>gi|57866994|ref|YP_188651.1| hypothetical protein SERP1074 [Staphylococcus epidermidis RP62A]
gi|57637652|gb|AAW54440.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
Length = 325
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 84/309 (27%), Positives = 152/309 (49%), Gaps = 7/309 (2%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ L + L L S+ I+ +L + T+ + + +R +S LL L +G
Sbjct: 12 RTVKTAVGMTLGVIICKLLSLDNYASSAILVVLCIKHTKMHSVQAILSRLVSCLLILFLG 71
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
S F LG H L + + +++PL L + G+ S V++ H+ K+ + L+ NE+
Sbjct: 72 SAIFSLLGQHAFVLGLIVLLFIPLTVVLNVQEGVITSCVILLHVFNAKAINGHLILNEIM 131
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKEL 185
L ++G A L NL MPS ++++ + + +E Q+ +I F F +A ND IK
Sbjct: 132 LLIVGLGIAFLMNLMMPSLDKKLNHFKQDIENQITEI---FNIFSQACSMHNDHLNIK-F 187
Query: 186 DTIL---QQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASES 242
D++L ++A L + D NH N HYF+MR+ Q +L+ M S + +
Sbjct: 188 DSLLLNIKKAKSLAFRDVKNHFVRNENSFYHYFDMREEQVELLKRMTSLLERINTDDPIL 247
Query: 243 LILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLE 302
+++L + ++ + L + + PLP T + +RA ++Q+L +LE
Sbjct: 248 EKISQLMYEIGSNVNSNDYTALRLHSLYEIRLSLDDLPLPTTHKTLNSRAHIIQILNELE 307
Query: 303 TFIELKVDF 311
++ +K F
Sbjct: 308 EYLNIKSQF 316
>gi|126700660|ref|YP_001089557.1| hypothetical protein CD3042 [Clostridium difficile 630]
gi|115252097|emb|CAJ69935.1| putative membrane protein [Clostridium difficile 630]
Length = 324
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 80/301 (26%), Positives = 156/301 (51%), Gaps = 1/301 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
+ IKL+L LA ++A L L YS AG+I +L+V DT+R T K + + LL
Sbjct: 8 KVIKLSLGCSLAIFIAWLLKLEYSMVAGVIVLLTVKDTKRETLKGSIGKIYGFLLCTIFS 67
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
L F+ LG++L + +++I I +PL F L + I V+ +H L+ TS + NE
Sbjct: 68 YLCFNILGYNLTSFSIFIFIIIPLCFLLNIQDVIAMCVVIASHYYLQGETSIKWILNEAG 127
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAAL-IKE 184
+F +GT +L N+Y+P+ +I ++++E++ +L+ + N + +
Sbjct: 128 IFAVGTGIGVLINMYIPTNIHKIHEVQKKLQEEVSIVLIDIADIIVNPKKENGYSRDLYT 187
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
L++++ ++ Y + +N L T + + + ++ ++Q IL+++ S ++ + ++ I
Sbjct: 188 LNSLIDSSISETYDNINNTLLSDTRFFLEHMDIIKSQRDILENLYSYVSQLNSTPPQAHI 247
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
L+ + + LL+E+ + + +PLP R EFE RA+L L +L+ F
Sbjct: 248 LSAFIHKIGYTEFEAETGNLLLEELKRLMISMKNQPLPVDRTEFENRAILFLCLTELKQF 307
Query: 305 I 305
+
Sbjct: 308 L 308
>gi|145953491|ref|ZP_01802499.1| hypothetical protein CdifQ_04003481 [Clostridium difficile
QCD-32g58]
Length = 324
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 80/301 (26%), Positives = 156/301 (51%), Gaps = 1/301 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
+ IKL+L LA ++A L L YS AG+I +L+V DT+R T K + + LL
Sbjct: 8 KVIKLSLGCSLAIFIAWLLKLEYSMVAGVIVLLTVKDTKRETLKGSIGKIYGFLLCTIFS 67
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
L F+ LG++L + +++I I +PL F L + I V+ +H L+ TS + NE
Sbjct: 68 YLCFNILGYNLTSFSIFIFIIIPLCFLLNIQDVIAMCVVIASHYYLQGETSIKWILNEAG 127
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAAL-IKE 184
+F +GT +L N+Y+P+ +I ++++E++ +L+ + N + + +
Sbjct: 128 IFAVGTGIGVLINMYIPTNIHKIHEVQKKLQEEVSIVLIDIADIIVNPKKENGYSRDLYK 187
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
L++++ ++ Y + +N L T + + + ++ ++Q IL+++ S ++ + ++ I
Sbjct: 188 LNSLIDSSISETYDNINNTLLSDTRFFLEHMDIIKSQRDILENLYSYVSQLNSTPPQAHI 247
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
L+ + + LL+E+ + + PLP R EFE RA+L L +L+ F
Sbjct: 248 LSAFIHKIGYTEFEAETGNLLLEELKRLMLSMKNHPLPVDRTEFENRAILFLCLTELKQF 307
Query: 305 I 305
+
Sbjct: 308 L 308
>gi|70726403|ref|YP_253317.1| hypothetical protein SH1402 [Staphylococcus haemolyticus JCSC1435]
gi|68447127|dbj|BAE04711.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 325
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 83/307 (27%), Positives = 154/307 (50%), Gaps = 3/307 (0%)
Query: 6 RTIKLALATCLAAWLADFLGLAYSTSAGIIAILSVTDTRRSTAKLAGNRFLSTLLALAIG 65
RT+K A+ L LA ++GL S+ I+ +L + T+ + + +RF+S +L L G
Sbjct: 12 RTLKTAVGITLGVILAKWIGLDNYASSAILIVLCIKHTKVHSVQAIVSRFVSCILILLFG 71
Query: 66 SLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSLLGNELA 125
SL F LG + L + + +++P+ L + G+ S V++ H+ + + L+ NEL
Sbjct: 72 SLVFSLLGQNALVLGLIVLLFIPITVMLKVQEGVVTSCVILLHVFNATTINLHLIINELL 131
Query: 126 LFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAAL-IKE 184
L IG A + NL MPS + + S+ + +E+ K+I + Y + ND L ++
Sbjct: 132 LLTIGLGIAFIMNLIMPSLDKTLVSFKKDIEKGFKEIFM--TYSEACSNYNNDFTLSFEK 189
Query: 185 LDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLI 244
L +++A + + D NH N + HYF+MRQ Q +L+ + +N +
Sbjct: 190 LQLDIRKAKSIAFRDVKNHFIRNENSYYHYFDMRQEQLELLRRIKPLLNQVTVDDPLLTD 249
Query: 245 LARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETF 304
++ L S+ ++ + L + E PLPK+ Q ++R+ ++Q+L +LE +
Sbjct: 250 VSHLMSEIGNNVNSNDYTALRLHSLYEIRLSLDELPLPKSHQSLKSRSSMMQILNELEEY 309
Query: 305 IELKVDF 311
+ +K F
Sbjct: 310 LNIKSQF 316
>gi|126653085|ref|ZP_01725220.1| YqjA [Bacillus sp. B14905]
gi|126590186|gb|EAZ84310.1| YqjA [Bacillus sp. B14905]
Length = 263
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 119/252 (47%)
Query: 60 LALAIGSLAFHFLGFHLGALAVYIAIYVPLAFRLGWEIGITPSTVLVTHLLLEKSTSWSL 119
+A+ ++F + LA + +++P L G S V++ H+ KS S L
Sbjct: 1 MAMFFAFVSFELFSYQPLTLAGMLLLFIPTIVSLRVADGFISSVVIIMHIYAAKSFSMEL 60
Query: 120 LGNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDA 179
+ NELAL IG + N+YMP Q+E++ Y ++EE KI L +L+ GD D
Sbjct: 61 VYNELALMAIGYGTGIAINMYMPDIQKELNYYRVKIEELYSKIFLEIASYLRQGDTLWDG 120
Query: 180 ALIKELDTILQQALELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAA 239
I E L A L + D NH + N + YF+MR+ Q I++ + I +
Sbjct: 121 HEIIEAIRTLNDAKSLAFKDVENHFTRRKNDYYMYFDMREKQLEIIERVLPKITTLPVIV 180
Query: 240 SESLILARLFSQTAKQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLR 299
E+ I+A + N A ++++ F + PLP+ ++F +A L Q +
Sbjct: 181 QEAEIVADFLQDLGGHIHSGNTASHYREKLEQVKHDFSQLPLPQNHEQFIAQAALYQFIE 240
Query: 300 DLETFIELKVDF 311
+++ ++E+K F
Sbjct: 241 EMDRYLEIKQSF 252
>gi|75761962|ref|ZP_00741881.1| Integral membrane protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74490542|gb|EAO53839.1| Integral membrane protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 189
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 91/178 (51%)
Query: 134 ALLANLYMPSRQQEIDSYHEQVEEQLKKILLRFEYFLKAGDGRNDAALIKELDTILQQAL 193
ALL N+YMPS + ++ Y +++E K IL +L+ + A + E + +L +A
Sbjct: 2 ALLVNMYMPSSENKLKEYQDKIESNFKTILFEMVVYLRNRESSWSGAELIETENMLNEAR 61
Query: 194 ELVYLDHSNHLFHQTNYHIHYFEMRQAQNRILQDMASNINNCHLAASESLILARLFSQTA 253
+L + N + +Y+ YF MR Q IL+ M + ++ ++A +
Sbjct: 62 DLSFKKLENAFMREDDYYYRYFNMRMQQFEILERMIPLAASLSWTYEQADMIADVVENIG 121
Query: 254 KQLSQENPARDLLDEIDNYLTVFRERPLPKTRQEFETRAMLLQLLRDLETFIELKVDF 311
+S E+ L ++ +FR+ PLP TR+EFE RA L+QL+ ++E ++ +K F
Sbjct: 122 NAISPESTGVISLRQLQEMRELFRDMPLPATREEFEIRAKLVQLVYEMEQYLLIKSRF 179
>gi|154503707|ref|ZP_02040767.1| hypothetical protein RUMGNA_01531 [Ruminococcus gnavus ATCC 29149]
gi|153795807|gb|EDN78227.1| hypothetical protein RUMGNA_01531 [Ruminococcus gnavus ATCC 29149]
Length = 271
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 99 ITPSTVLVTHLLLEKSTSWSLLGNELALFLIGTSFALLANLYMPSRQQEIDSYHEQVEEQ 158
+ +TVLV HL +S +LL NEL L L GTS +L NLYMP +I ++E+
Sbjct: 37 LVSNTVLVLHLYAAQSVHPALLVNELLLLLTGTSCGILMNLYMPGNSAKIRRAQSELEQI 96
Query: 159 LKKILLRFEYFLKAGDGRNDAAL------IKELDTILQQALELVYLDHSNHLFHQTNYHI 212
+ R A D D L + +LD IL++ + + + N L Y +
Sbjct: 97 FRNTFHRI-----ARDIVMDKQLACTFFDLSDLDLILKKLEKEAHENQGNTLLSDEQYFV 151
Query: 213 HYFEMRQAQNRILQDMASNINNCHLAASESLILARLFSQTAKQLSQENPARDLLDEIDNY 272
Y EMR+ Q +++ + NI H ++ ++ + + + N ++L+ ++
Sbjct: 152 KYVEMRKNQKLVVEKLCQNIRLLHDVPIQAHAISHFIEDVSIKFHESNNTQELMQKLTEM 211
Query: 273 LTVFRERPLPKTRQEFETRAMLLQLLRDLETFIELKVDF 311
T ++ PLP TR EFE RA+L ++L DLE I +K F
Sbjct: 212 QTSMQKEPLPVTRTEFENRAVLYRILYDLEELITIKKRF 250
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.324 0.137 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,031,606,741
Number of Sequences: 5470121
Number of extensions: 40071860
Number of successful extensions: 165481
Number of sequences better than 1.0e-05: 64
Number of HSP's better than 0.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 165374
Number of HSP's gapped (non-prelim): 65
length of query: 320
length of database: 1,894,087,724
effective HSP length: 133
effective length of query: 187
effective length of database: 1,166,561,631
effective search space: 218147024997
effective search space used: 218147024997
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 129 (54.3 bits)