BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= SPy_1273 cAMP factor
(257 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_269402.1| CAMP factor [Streptococcus pyogenes M1 GAS... 525 e-147
gb|AAC29481.1| CAMP factor [Streptococcus pyogenes] 523 e-147
ref|YP_282344.1| cAMP factor [Streptococcus pyogenes MGAS50... 523 e-147
ref|NP_664709.1| CAMP factor [Streptococcus pyogenes MGAS31... 519 e-146
ref|YP_596816.1| cAMP factor [Streptococcus pyogenes MGAS94... 519 e-146
ref|YP_001128379.1| CAMP factor [Streptococcus pyogenes str... 517 e-145
ref|ZP_00365867.1| COG0840: Methyl-accepting chemotaxis pro... 517 e-145
ref|YP_280421.1| cAMP factor [Streptococcus pyogenes MGAS61... 514 e-144
ref|YP_602625.1| cAMP factor [Streptococcus pyogenes MGAS10... 512 e-144
ref|YP_598704.1| cAMP factor [Streptococcus pyogenes MGAS10... 511 e-143
ref|NP_607334.1| CAMP factor [Streptococcus pyogenes MGAS82... 511 e-143
gb|ABS19581.1| cAMP factor [Streptococcus agalactiae] 310 7e-83
ref|NP_689029.1| cAMP factor [Streptococcus agalactiae 2603... 308 2e-82
ref|YP_330575.1| CAMP factor [Streptococcus agalactiae A909... 306 1e-81
emb|CAA51283.1| cAMP factor [Streptococcus agalactiae] 306 1e-81
ref|ZP_00784753.1| CAMP factor [Streptococcus agalactiae CO... 290 4e-77
sp|P09879|PROB_STRAG Protein B (cAMP factor) >gi|226074|prf... 288 3e-76
ref|ZP_00784762.1| CAMP factor [Streptococcus agalactiae CO... 288 3e-76
ref|ZP_00788802.1| CAMP factor [Streptococcus agalactiae CJ... 288 3e-76
gb|AAA78910.1| CAMP factor 287 5e-76
ref|ZP_00781973.1| CAMP factor [Streptococcus agalactiae 18... 285 1e-75
gb|AAL87248.1| cAMP-factor [Streptococcus canis] 197 6e-49
gb|ABS82571.1| CAMP factor [Streptococcus iniae] 147 6e-34
ref|YP_056773.1| CAMP factor [Propionibacterium acnes KPA17... 135 3e-30
gb|AAX14382.1| cAMP factor 3 [Propionibacterium acnes] 133 1e-29
gb|AAX14387.1| cAMP factor 3 [Propionibacterium acnes] 133 1e-29
gb|AAV84918.1| Camp3 [Propionibacterium acnes] 132 2e-29
gb|AAV84917.1| Camp2 [Propionibacterium acnes] 120 8e-26
ref|YP_055402.1| CAMP factor [Propionibacterium acnes KPA17... 120 9e-26
gb|AAX14381.1| cAMP factor 2 [Propionibacterium acnes] >gi|... 119 1e-25
dbj|BAE25680.1| unnamed protein product [Mus musculus] 102 2e-20
gb|AAX14383.1| cAMP factor 4 [Propionibacterium acnes] 102 2e-20
gb|AAX14388.1| cAMP factor 4 [Propionibacterium acnes] 102 2e-20
ref|YP_055938.1| CAMP factor [Propionibacterium acnes KPA17... 102 2e-20
gb|AAV84919.1| Camp4 [Propionibacterium acnes] 102 3e-20
ref|YP_001692416.1| conserved hypothetical protein [Finegol... 88 6e-16
gb|AAX14380.1| cAMP factor 1 [Propionibacterium acnes] >gi|... 70 2e-10
ref|YP_001692415.1| conserved hypothetical protein [Finegol... 69 3e-10
ref|YP_056047.1| CAMP factor [Propionibacterium acnes KPA17... 69 3e-10
gb|AAS92206.1| camp factor-1 [Propionibacterium acnes] 69 3e-10
ref|YP_055905.1| CAMP factor [Propionibacterium acnes KPA17... 62 4e-08
gb|AAX14384.1| cAMP factor 5 [Propionibacterium acnes] >gi|... 62 4e-08
gb|AAV84920.1| Camp5 [Propionibacterium acnes] 61 9e-08
ref|ZP_01693923.1| hypothetical protein M23134_06052 [Micro... 38 0.76
ref|XP_001201577.1| PREDICTED: similar to transposase [Stro... 37 1.4
ref|ZP_02948298.1| HD-GYP hydrolase domain containing prote... 35 3.3
ref|XP_780067.2| PREDICTED: similar to transposase [Strongy... 35 6.7
dbj|BAC83223.1| putative resistance complex protein I2C-2 [... 34 7.4
ref|XP_001191653.1| PREDICTED: similar to transposase [Stro... 34 7.7
ref|XP_793701.2| PREDICTED: similar to transposase [Strongy... 34 7.8
>ref|NP_269402.1| CAMP factor [Streptococcus pyogenes M1 GAS]
gb|AAK34123.1| CAMP factor [Streptococcus pyogenes M1 GAS]
Length = 257
Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQDALETALKS
Sbjct: 241 DDEVIAVQDALETALKS 257
>gb|AAC29481.1| CAMP factor [Streptococcus pyogenes]
Length = 257
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/257 (99%), Positives = 256/257 (99%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQ THKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQFTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQDALETALKS
Sbjct: 241 DDEVIAVQDALETALKS 257
>ref|YP_282344.1| cAMP factor [Streptococcus pyogenes MGAS5005]
gb|AAZ51599.1| cAMP factor [Streptococcus pyogenes MGAS5005]
Length = 257
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/257 (99%), Positives = 256/257 (99%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD ILMNNNQANFQRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANFQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQDALETALKS
Sbjct: 241 DDEVIAVQDALETALKS 257
>ref|NP_664709.1| CAMP factor [Streptococcus pyogenes MGAS315]
ref|NP_802366.1| CAMP factor [Streptococcus pyogenes SSI-1]
gb|AAM79512.1| CAMP factor [Streptococcus pyogenes MGAS315]
dbj|BAC64199.1| CAMP factor [Streptococcus pyogenes SSI-1]
Length = 257
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/257 (98%), Positives = 255/257 (99%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD ILMNNNQANFQRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANFQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIE TVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQ+ALETALKS
Sbjct: 241 DDEVIAVQNALETALKS 257
>ref|YP_596816.1| cAMP factor [Streptococcus pyogenes MGAS9429]
ref|YP_600637.1| cAMP factor [Streptococcus pyogenes MGAS2096]
gb|ABF32272.1| cAMP factor [Streptococcus pyogenes MGAS9429]
gb|ABF36093.1| cAMP factor [Streptococcus pyogenes MGAS2096]
Length = 257
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/257 (98%), Positives = 254/257 (98%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD ILMNNNQAN QRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIE TVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQDALETALKS
Sbjct: 241 DDEVIAVQDALETALKS 257
>ref|YP_001128379.1| CAMP factor [Streptococcus pyogenes str. Manfredo]
emb|CAM30148.1| CAMP factor [Streptococcus pyogenes str. Manfredo]
Length = 257
Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/257 (98%), Positives = 255/257 (99%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD ILMNN+QANFQRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNSQANFQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIE TVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQ+ALETALKS
Sbjct: 241 DDEVIAVQNALETALKS 257
>ref|ZP_00365867.1| COG0840: Methyl-accepting chemotaxis protein [Streptococcus
pyogenes M49 591]
Length = 257
Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/257 (98%), Positives = 254/257 (98%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD ILMNNNQAN QRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIE TVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQ+ALETALKS
Sbjct: 241 DDEVIAVQNALETALKS 257
>ref|YP_280421.1| cAMP factor [Streptococcus pyogenes MGAS6180]
gb|AAX72066.1| cAMP factor [Streptococcus pyogenes MGAS6180]
Length = 257
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/257 (98%), Positives = 253/257 (98%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD ILMNNNQAN QRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIE TVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIK FDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKSFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQ+ALETALKS
Sbjct: 241 DDEVIAVQNALETALKS 257
>ref|YP_602625.1| cAMP factor [Streptococcus pyogenes MGAS10750]
gb|ABF38081.1| cAMP factor [Streptococcus pyogenes MGAS10750]
Length = 257
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/257 (97%), Positives = 253/257 (98%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD ILMNNNQAN QRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIE TVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYP+LQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPNLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIK FDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKSFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQ+ALETALKS
Sbjct: 241 DDEVIAVQNALETALKS 257
>ref|YP_598704.1| cAMP factor [Streptococcus pyogenes MGAS10270]
gb|ABF34160.1| cAMP factor [Streptococcus pyogenes MGAS10270]
Length = 257
Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/257 (96%), Positives = 253/257 (98%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD +LMNNNQAN QRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTVLMNNNQANLQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIE T+NKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIEATINKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLER+KKVLG+K FDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERNKKVLGVKSFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQ+ALETALKS
Sbjct: 241 DDEVIAVQNALETALKS 257
>ref|NP_607334.1| CAMP factor [Streptococcus pyogenes MGAS8232]
gb|AAL97833.1| CAMP factor [Streptococcus pyogenes MGAS8232]
Length = 257
Score = 511 bits (1315), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/257 (97%), Positives = 252/257 (98%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQ 60
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPD ILMNNNQAN QRDALVQKLDEGHQ
Sbjct: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQ 60
Query: 61 QLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
QLEAIKHEAKGTDIE TVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV
Sbjct: 61 QLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIV 120
Query: 121 FSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
FSTTQLTHKVEKAHTD GFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP
Sbjct: 121 FSTTQLTHKVEKAHTDTGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQP 180
Query: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
TDRATIYTKAKLNKAIWNTRLERDKKVLGIK FDVYNRLNKAITHAVGVQLNPTTTVQQV
Sbjct: 181 TDRATIYTKAKLNKAIWNTRLERDKKVLGIKSFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
Query: 241 DDEVIAVQDALETALKS 257
DDEVIAVQ+ALETALKS
Sbjct: 241 DDEVIAVQNALETALKS 257
>gb|ABS19581.1| cAMP factor [Streptococcus agalactiae]
Length = 255
Score = 310 bits (793), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 155/257 (60%), Positives = 194/257 (75%), Gaps = 3/257 (1%)
Query: 1 MKPKHLLCLS-TVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGH 59
M H++CLS T+VAG LFS V AD + P + N+ +N Q + QKLD+
Sbjct: 1 MNVTHMMCLSGTLVAGALLFSPAVLEVHADQVTTPQVV--NHVNSNNQAQQMAQKLDQDS 58
Query: 60 QQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAI 119
QL IK +GTD E VN+AI +V+ +K+S+R N+ET+YD +SIG+RVEAL+D I+AI
Sbjct: 59 IQLRNIKDNVQGTDYEKPVNEAITSVEKLKTSLRANSETVYDLNSIGSRVEALTDVIEAI 118
Query: 120 VFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQ 179
FST L +KV +A+ DMGF ITKLVIRI+DPFASVD+IKAQV ++KALE+KV+ YPDL+
Sbjct: 119 TFSTQHLANKVSQANIDMGFGITKLVIRILDPFASVDSIKAQVNDVKALEQKVLTYPDLK 178
Query: 180 PTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQ 239
PTDRATIYTK+KL+K IWNTR RDKKVL +K F VYN LNKAITHAVGVQLNP TVQQ
Sbjct: 179 PTDRATIYTKSKLDKEIWNTRFTRDKKVLNVKEFKVYNTLNKAITHAVGVQLNPNVTVQQ 238
Query: 240 VDDEVIAVQDALETALK 256
VD E++ +Q AL+TALK
Sbjct: 239 VDQEIVTLQAALQTALK 255
>ref|NP_689029.1| cAMP factor [Streptococcus agalactiae 2603V/R]
ref|NP_736433.1| CAMP factor [Streptococcus agalactiae NEM316]
ref|ZP_00790029.1| CAMP factor [Streptococcus agalactiae 515]
gb|AAN00902.1|AE014283_21 cAMP factor [Streptococcus agalactiae 2603V/R]
emb|CAD47659.1| CAMP factor [Streptococcus agalactiae NEM316]
gb|EAO71224.1| CAMP factor [Streptococcus agalactiae 515]
Length = 255
Score = 308 bits (789), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/257 (60%), Positives = 194/257 (75%), Gaps = 3/257 (1%)
Query: 1 MKPKHLLCLS-TVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGH 59
M KH++ LS T+VAG LFS V AD + P + N+ +N Q + QKLD+
Sbjct: 1 MNVKHMMYLSGTLVAGALLFSPAVLEVHADQVTTPQVV--NHVNSNNQAQQMAQKLDQDS 58
Query: 60 QQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAI 119
QL IK +GTD E TVN+AI +V+ +K+S+R N ET+YD +SIG+RVEAL+D I+AI
Sbjct: 59 IQLRNIKDNVQGTDYEKTVNEAITSVEKLKTSLRANPETVYDLNSIGSRVEALTDVIEAI 118
Query: 120 VFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQ 179
FST L +KV +A+ DMGF ITKLVIRI+DPFASVD+IKAQV ++KALE+KV+ YPDL+
Sbjct: 119 TFSTQHLANKVSQANIDMGFGITKLVIRILDPFASVDSIKAQVNDVKALEQKVLTYPDLK 178
Query: 180 PTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQ 239
PTDRATIYTK+KL+K IWNTR RDKKVL +K F VYN LNKAITHAVGVQLNP TVQQ
Sbjct: 179 PTDRATIYTKSKLDKEIWNTRFTRDKKVLNVKEFKVYNTLNKAITHAVGVQLNPNVTVQQ 238
Query: 240 VDDEVIAVQDALETALK 256
VD E++ +Q AL+TALK
Sbjct: 239 VDQEIVTLQAALQTALK 255
>ref|YP_330575.1| CAMP factor [Streptococcus agalactiae A909]
ref|ZP_00783741.1| CAMP factor [Streptococcus agalactiae H36B]
gb|ABA44891.1| CAMP factor [Streptococcus agalactiae A909]
gb|EAO77525.1| CAMP factor [Streptococcus agalactiae H36B]
Length = 255
Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/257 (60%), Positives = 193/257 (75%), Gaps = 3/257 (1%)
Query: 1 MKPKHLLCLS-TVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGH 59
M KH++ LS T+VAG LFS V AD + P + N+ +N Q + QKLD+
Sbjct: 1 MNVKHMMYLSGTLVAGALLFSPAVLEVHADQVTTPQVV--NHVNSNNQAQQMAQKLDQDS 58
Query: 60 QQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAI 119
QL IK +GTD E VN+AI +V+ +K+S+R N ET+YD +SIG+RVEAL+D I+AI
Sbjct: 59 IQLRNIKDNVQGTDYEKPVNEAITSVEKLKTSLRANPETVYDLNSIGSRVEALTDVIEAI 118
Query: 120 VFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQ 179
FST L +KV +A+ DMGF ITKLVIRI+DPFASVD+IKAQV ++KALE+KV+ YPDL+
Sbjct: 119 TFSTQHLANKVSQANIDMGFGITKLVIRILDPFASVDSIKAQVNDVKALEQKVLTYPDLK 178
Query: 180 PTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQ 239
PTDRATIYTK+KL+K IWNTR RDKKVL +K F VYN LNKAITHAVGVQLNP TVQQ
Sbjct: 179 PTDRATIYTKSKLDKEIWNTRFTRDKKVLNVKEFKVYNTLNKAITHAVGVQLNPNVTVQQ 238
Query: 240 VDDEVIAVQDALETALK 256
VD E++ +Q AL+TALK
Sbjct: 239 VDQEIVTLQAALQTALK 255
>emb|CAA51283.1| cAMP factor [Streptococcus agalactiae]
Length = 255
Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/257 (60%), Positives = 193/257 (75%), Gaps = 3/257 (1%)
Query: 1 MKPKHLLCLS-TVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGH 59
M H++ LS T+VAG LFS V AD + P + N+ +N Q + QKLD+
Sbjct: 1 MNVTHMMYLSGTLVAGALLFSPAVLEVHADQVTTPQVV--NHVNSNNQAQQMAQKLDQDS 58
Query: 60 QQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAI 119
QL IK +GTD E VN+AI +V+ +K+S+R N ET+YD +SIG+RVEAL+D I+AI
Sbjct: 59 IQLRNIKDNVQGTDYEKPVNEAITSVEKLKTSLRANPETVYDLNSIGSRVEALTDVIEAI 118
Query: 120 VFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQ 179
FST LT+KV +A+ DMGF ITKLVIRI+DPFASVD+IKAQV ++KALE+KV+ YPDL+
Sbjct: 119 TFSTQHLTNKVSQANIDMGFGITKLVIRILDPFASVDSIKAQVNDVKALEQKVLTYPDLK 178
Query: 180 PTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQ 239
PTDRATIYTK+KL+K IWNTR RDKKVL +K F VYN LNKAITHAVGVQLNP TVQQ
Sbjct: 179 PTDRATIYTKSKLDKEIWNTRFTRDKKVLNVKEFKVYNTLNKAITHAVGVQLNPNVTVQQ 238
Query: 240 VDDEVIAVQDALETALK 256
VD E++ +Q AL+TALK
Sbjct: 239 VDQEIVTLQAALQTALK 255
>ref|ZP_00784753.1| CAMP factor [Streptococcus agalactiae COH1]
gb|EAO76486.1| CAMP factor [Streptococcus agalactiae COH1]
Length = 229
Score = 290 bits (743), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 178/229 (77%), Gaps = 2/229 (0%)
Query: 28 ADDASNPDAILMNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAIDAVDH 87
AD + P + N+ +N Q + QKLD+ QL IK +GTD E VN+AI +V+
Sbjct: 3 ADQVTTPQVV--NHVNSNNQAQQMAQKLDQDSIQLRNIKDNVQGTDYEKPVNEAITSVEK 60
Query: 88 MKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIR 147
+K+S+R N ET+YD +SIG+RVEAL+D I+AI FST LT+KV +A+ DMGF ITKLVIR
Sbjct: 61 LKTSLRANPETVYDLNSIGSRVEALTDVIEAITFSTQHLTNKVSQANIDMGFGITKLVIR 120
Query: 148 IIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKV 207
I+DPFASVD+IKAQV ++KALE+KV+ YPDL+PTDRATIYTK+KL+K IWNTR RDKKV
Sbjct: 121 ILDPFASVDSIKAQVNDVKALEQKVLTYPDLKPTDRATIYTKSKLDKEIWNTRFTRDKKV 180
Query: 208 LGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALK 256
L +K F VYN LNKAITHAVGVQLNP TVQQVD E++ +Q AL+TALK
Sbjct: 181 LNVKEFKVYNTLNKAITHAVGVQLNPNVTVQQVDQEIVTLQAALQTALK 229
>sp|P09879|PROB_STRAG Protein B (cAMP factor)
prf||1410210A protein B
Length = 226
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/228 (61%), Positives = 177/228 (77%), Gaps = 2/228 (0%)
Query: 29 DDASNPDAILMNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAIDAVDHM 88
D + P + N+ +N Q + QKLD+ QL IK +GTD E VN+AI +V+ +
Sbjct: 1 DQVTTPQVV--NHVNSNNQAQQMAQKLDQDSIQLRNIKDNVQGTDYEKPVNEAITSVEKL 58
Query: 89 KSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRI 148
K+S+R N+ET+YD +SIG+RVEAL+D I+AI FST L +KV +A+ DMGF ITKLVIRI
Sbjct: 59 KTSLRANSETVYDLNSIGSRVEALTDVIEAITFSTQHLANKVSQANIDMGFGITKLVIRI 118
Query: 149 IDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVL 208
+DPFASVD+IKAQV ++KALE+KV+ YPDL+PTDRATIYTK+KL+K IWNTR RDKKVL
Sbjct: 119 LDPFASVDSIKAQVNDVKALEQKVLTYPDLKPTDRATIYTKSKLDKEIWNTRFTRDKKVL 178
Query: 209 GIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALK 256
+K F VYN LNKAITHAVGVQLNP TVQQVD E++ +Q AL+TALK
Sbjct: 179 NVKEFKVYNTLNKAITHAVGVQLNPNVTVQQVDQEIVTLQAALQTALK 226
>ref|ZP_00784762.1| CAMP factor [Streptococcus agalactiae COH1]
ref|ZP_00790024.1| CAMP factor [Streptococcus agalactiae 515]
gb|EAO71219.1| CAMP factor [Streptococcus agalactiae 515]
gb|EAO76495.1| CAMP factor [Streptococcus agalactiae COH1]
Length = 252
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/257 (58%), Positives = 189/257 (73%), Gaps = 6/257 (2%)
Query: 1 MKPKHLLCLS-TVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGH 59
M K ++ S ++ G+ALFS V AD A+N + NNQ + QKLD+
Sbjct: 1 MAKKQVVYFSIAILTGVALFSPAILEVHADQATNHVVVSQVNNQQQIK-----QKLDQDS 55
Query: 60 QQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAI 119
QL IK++ +GTD E V+ AI+AVD MKSS+ N TIYD SIG R+EA++D I+AI
Sbjct: 56 VQLNTIKNQVQGTDYEKPVDTAINAVDKMKSSLGGNPATIYDLGSIGPRIEAITDVIEAI 115
Query: 120 VFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQ 179
FST LT+KV +A+ DMGF ITKLVIRI DPFASVD+IKAQV E+K LE+KV+ YPDL+
Sbjct: 116 NFSTHNLTNKVSQANVDMGFGITKLVIRIADPFASVDSIKAQVAEVKQLEQKVMTYPDLK 175
Query: 180 PTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQ 239
PTD+ATIYTK+KL+KAIW+ R++RD+KVL K FDVYN LNKAITHAVGVQLNP TVQ+
Sbjct: 176 PTDKATIYTKSKLDKAIWDIRVQRDQKVLNKKSFDVYNALNKAITHAVGVQLNPNVTVQE 235
Query: 240 VDDEVIAVQDALETALK 256
VD E++ +Q AL+TALK
Sbjct: 236 VDQEIVNLQMALQTALK 252
>ref|ZP_00788802.1| CAMP factor [Streptococcus agalactiae CJB111]
gb|EAO72464.1| CAMP factor [Streptococcus agalactiae CJB111]
Length = 231
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/229 (62%), Positives = 177/229 (77%), Gaps = 2/229 (0%)
Query: 28 ADDASNPDAILMNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAIDAVDH 87
AD + P + N+ +N Q + QKLD+ QL IK +GTD E VN+AI +V+
Sbjct: 5 ADQVTTPQVV--NHVNSNNQAQQMAQKLDQDSIQLRNIKDNVQGTDYEKPVNEAITSVEK 62
Query: 88 MKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIR 147
+K+S+R N ET+YD +SIG+RVEAL+D I+AI FST L +KV +A+ DMGF ITKLVIR
Sbjct: 63 LKTSLRANPETVYDLNSIGSRVEALTDVIEAITFSTQHLANKVSQANIDMGFGITKLVIR 122
Query: 148 IIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKV 207
I+DPFASVD+IKAQV ++KALE+KV+ YPDL+PTDRATIYTK+KL+K IWNTR RDKKV
Sbjct: 123 ILDPFASVDSIKAQVNDVKALEQKVLTYPDLKPTDRATIYTKSKLDKEIWNTRFTRDKKV 182
Query: 208 LGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALK 256
L +K F VYN LNKAITHAVGVQLNP TVQQVD E++ +Q AL+TALK
Sbjct: 183 LNVKEFKVYNTLNKAITHAVGVQLNPNVTVQQVDQEIVTLQAALQTALK 231
>gb|AAA78910.1| CAMP factor
Length = 256
Score = 287 bits (735), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/261 (55%), Positives = 197/261 (75%), Gaps = 10/261 (3%)
Query: 1 MKPKHLLCLSTVVAGLALFSTMTHSVLAD--DASNPDAILMNNNQANF---QRDALVQKL 55
M+ K LL L+ +AG+ LFS + SV A+ + S P +NN++N +++ + L
Sbjct: 1 MEFKKLLYLTGSIAGITLFSPILTSVQANQINVSQP-----SNNESNVISQKKEEIDNSL 55
Query: 56 DEGHQQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDA 115
++ QL A+K + KGT+ E +VN AI AV+++K+S+R N ETIYD +SIG RVEA+SD
Sbjct: 56 NQESAQLYALKEDVKGTEKEQSVNSAISAVENLKTSLRANPETIYDLNSIGTRVEAISDV 115
Query: 116 IKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINY 175
I+AIVFST QLT+KV++AH DMGFAITKL+IRI DPFAS ++IK QV+ +K ++ V+ Y
Sbjct: 116 IQAIVFSTQQLTNKVDQAHIDMGFAITKLLIRIADPFASNESIKGQVEAVKQVQATVLTY 175
Query: 176 PDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTT 235
PDLQPTDRATIY K+KL+K IW TR+ RD+KVL +K F+VY++LNKAITHAVGVQLNPT
Sbjct: 176 PDLQPTDRATIYVKSKLDKLIWQTRITRDQKVLNVKSFEVYHQLNKAITHAVGVQLNPTV 235
Query: 236 TVQQVDDEVIAVQDALETALK 256
TV QVD E+ +Q+AL TAL+
Sbjct: 236 TVAQVDQEIKVLQEALNTALQ 256
>ref|ZP_00781973.1| CAMP factor [Streptococcus agalactiae 18RS21]
gb|EAO61432.1| CAMP factor [Streptococcus agalactiae 18RS21]
Length = 206
Score = 285 bits (730), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 168/206 (81%)
Query: 51 LVQKLDEGHQQLEAIKHEAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVE 110
+ QKLD+ QL IK +GTD E TVN+AI +V+ +K+S+R N ET+YD +SIG+RVE
Sbjct: 1 MAQKLDQDSIQLRNIKDNVQGTDYEKTVNEAITSVEKLKTSLRANPETVYDLNSIGSRVE 60
Query: 111 ALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEE 170
AL+D I+AI FST L +KV +A+ DMGF ITKLVIRI+DPFASVD+IKAQV ++KALE+
Sbjct: 61 ALTDVIEAITFSTQHLANKVSQANIDMGFGITKLVIRILDPFASVDSIKAQVNDVKALEQ 120
Query: 171 KVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQ 230
KV+ YPDL+PTDRATIYTK+KL+K IWNTR RDKKVL +K F VYN LNKAITHAVGVQ
Sbjct: 121 KVLTYPDLKPTDRATIYTKSKLDKEIWNTRFTRDKKVLNVKEFKVYNTLNKAITHAVGVQ 180
Query: 231 LNPTTTVQQVDDEVIAVQDALETALK 256
LNP TVQQVD E++ +Q AL+TALK
Sbjct: 181 LNPNVTVQQVDQEIVTLQAALQTALK 206
>gb|AAL87248.1| cAMP-factor [Streptococcus canis]
Length = 111
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/111 (83%), Positives = 105/111 (94%)
Query: 109 VEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKAL 168
VEA S+AI+AIVFSTTQLT+KVE+AH DMGFAITKLVIRI+DPF SVDAIKAQV+E+KAL
Sbjct: 1 VEASSEAIQAIVFSTTQLTNKVEQAHIDMGFAITKLVIRILDPFTSVDAIKAQVEELKAL 60
Query: 169 EEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRL 219
E+KV+NYPDLQPTDRATIYTKAKL+KAIWNTR ERDKKVLG+K F+VYN L
Sbjct: 61 EQKVLNYPDLQPTDRATIYTKAKLDKAIWNTRFERDKKVLGVKSFEVYNTL 111
>gb|ABS82571.1| CAMP factor [Streptococcus iniae]
Length = 94
Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 78/93 (83%)
Query: 136 DMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKA 195
DMGFAITKLVIRI DPF SVDAIKAQVQ I LE+KV+ Y DL+ +DRATIY K+ L+K
Sbjct: 2 DMGFAITKLVIRIADPFTSVDAIKAQVQAIADLEKKVLTYADLKASDRATIYVKSSLDKV 61
Query: 196 IWNTRLERDKKVLGIKPFDVYNRLNKAITHAVG 228
IWNTR ERD+KVLGIK F VYN LN+AITHAVG
Sbjct: 62 IWNTRFERDQKVLGIKSFAVYNTLNQAITHAVG 94
>ref|YP_056773.1| CAMP factor [Propionibacterium acnes KPA171202]
gb|AAT83815.1| CAMP factor [Propionibacterium acnes KPA171202]
Length = 271
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 101/155 (65%), Gaps = 1/155 (0%)
Query: 101 DFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKA 160
D S+I ARV+ L+ ++K I + L +KVE AH ++GF+IT+ +IR I+P ++ +
Sbjct: 106 DLSTIPARVDLLTTSVKTIQQANHNLVNKVEAAHVELGFSITRALIRTINPTSTAAQLAE 165
Query: 161 QVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLN 220
++ + KV Y DL+PTD AT+Y K +LN IW TR+ RDK +LG K + Y +N
Sbjct: 166 SKADVLSTYAKVAAYRDLKPTDAATVYVKNRLNTKIWQTRINRDKYLLG-KNAEGYKAIN 224
Query: 221 KAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
KA+THA GV NP TTV+QVDDEV A+ A + AL
Sbjct: 225 KALTHATGVWFNPATTVKQVDDEVKALDLAFQAAL 259
>gb|AAX14382.1| cAMP factor 3 [Propionibacterium acnes]
Length = 271
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Query: 101 DFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKA 160
D S+I ARV+ L+ ++K I + L +KVE AH ++GF+IT+ +IR I+P ++ +
Sbjct: 106 DLSTIPARVDLLTTSVKTIQQANHNLVNKVEAAHVELGFSITRALIRTINPTSTAAQLAE 165
Query: 161 QVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLN 220
++ + KV Y DL+PTD AT+Y K +LN IW TR+ RDK +LG K + Y +N
Sbjct: 166 SKADVLSTYAKVAAYRDLKPTDAATVYVKNRLNTKIWQTRINRDKYLLG-KNAEGYKAIN 224
Query: 221 KAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
KA+THA GV NP TTV+QVDDEV A+ A + L
Sbjct: 225 KALTHATGVWFNPATTVKQVDDEVKALDLAFQATL 259
>gb|AAX14387.1| cAMP factor 3 [Propionibacterium acnes]
Length = 271
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Query: 101 DFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKA 160
D S+I ARV+ L+ ++K I + L +KVE AH ++GF+IT+ +IR I+P ++ +
Sbjct: 106 DLSTIPARVDLLTTSVKTIQQANHNLVNKVEAAHVELGFSITRALIRTINPTSTAAQLAE 165
Query: 161 QVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLN 220
++ + KV Y DL+PTD AT+Y K +LN IW TR+ RDK +LG K + Y +N
Sbjct: 166 SKADVLSTYAKVAAYRDLKPTDAATVYVKNRLNTKIWQTRINRDKYLLG-KNAEGYKAIN 224
Query: 221 KAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
KA+THA GV NP TTV+QVDDEV A+ A + L
Sbjct: 225 KALTHATGVWFNPATTVKQVDDEVKALDLAFQATL 259
>gb|AAV84918.1| Camp3 [Propionibacterium acnes]
Length = 271
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Query: 101 DFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKA 160
D S+I ARV+ L+ ++K I + L +KVE AH ++GF+IT+ +IR I+P ++ +
Sbjct: 106 DLSTIPARVDLLTTSVKTIQQANHNLVNKVEAAHVELGFSITRALIRTINPTSTAAQLAE 165
Query: 161 QVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLN 220
++ + KV Y DL+PTD AT+Y K LN IW TR+ RDK +LG K + Y +N
Sbjct: 166 SKADVLSTYAKVAAYRDLKPTDAATVYVKNGLNTKIWQTRINRDKYLLG-KNAEGYKAIN 224
Query: 221 KAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
KA+THA GV NP TTV+QVDDEV A+ A + L
Sbjct: 225 KALTHATGVWFNPATTVKQVDDEVKALDLAFQATL 259
>gb|AAV84917.1| Camp2 [Propionibacterium acnes]
Length = 267
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 20/241 (8%)
Query: 20 STMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVN 79
+T TH + A DA N +Q L+ L++++ G+D +
Sbjct: 37 ATSTHELSASDARNS-----------------IQLLNAHIATLQSVQKSVPGSDYSDQIR 79
Query: 80 KAIDAVDHMKS---SIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTD 136
+ A ++ ++ YD S+I R++ ++ I I +TT L +KV AH +
Sbjct: 80 DLLKAAFDLRGLIETLAHGGIPFYDPSTIMPRIKLVATTIDTIHTATTTLQNKVSPAHVE 139
Query: 137 MGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAI 196
+G +TK V+ +P ++ + A+ +KA EKV YPDL P D AT+Y + +K I
Sbjct: 140 LGLEVTKAVLLTANPASTAKELDAEGAALKARLEKVSQYPDLTPNDVATVYVRTNFSKTI 199
Query: 197 WNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALK 256
W R RD+ +LG K VY LN AIT AVGV+LNP TTV + + A +TA
Sbjct: 200 WQVRANRDRYILGHKSAAVYKTLNHAITKAVGVRLNPKTTVGNIQAARTELLAAYQTAFN 259
Query: 257 S 257
S
Sbjct: 260 S 260
>ref|YP_055402.1| CAMP factor [Propionibacterium acnes KPA171202]
gb|AAT82444.1| CAMP factor [Propionibacterium acnes KPA171202]
Length = 267
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 20/241 (8%)
Query: 20 STMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVN 79
+T TH + A DA N +Q L+ L++++ G+D +
Sbjct: 37 ATSTHELSASDARNS-----------------IQLLNAHIATLQSVQKSVPGSDYSDQIR 79
Query: 80 KAIDAVDHMKS---SIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTD 136
+ A ++ ++ YD S+I R++ ++ I I +TT L +KV AH +
Sbjct: 80 DLLKAAFDLRGLIETLAHGGIPFYDPSTIMPRIKLVATTIDTIHTATTTLQNKVRPAHVE 139
Query: 137 MGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAI 196
+G +TK V+ +P ++ + A+ +KA EKV YPDL P D AT+Y + +K I
Sbjct: 140 LGLEVTKAVLLTANPASTAKELDAEGAALKARLEKVSQYPDLTPNDVATVYVRTNFSKTI 199
Query: 197 WNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALK 256
W R RD+ +LG K VY LN AIT AVGV+LNP TTV + + A +TA
Sbjct: 200 WQVRANRDRYILGHKSAAVYKTLNHAITKAVGVRLNPKTTVGNIQAARTELLAAYQTAFN 259
Query: 257 S 257
S
Sbjct: 260 S 260
>gb|AAX14381.1| cAMP factor 2 [Propionibacterium acnes]
gb|AAX14386.1| cAMP factor 2 [Propionibacterium acnes]
Length = 267
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 133/263 (50%), Gaps = 9/263 (3%)
Query: 1 MKPKHL---LCLSTVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDE 57
MK HL L + ++ AL + H+V + + A + AN R+++ Q L+
Sbjct: 1 MKKTHLVAPLLVGAMLVPAALSAPSAHAV--EPTTTISATSTHELSANEARNSM-QLLNA 57
Query: 58 GHQQLEAIKHEAKGTDIETTVNKAIDAVDHMKS---SIRFNTETIYDFSSIGARVEALSD 114
L++++ G+D + + A ++ ++ YD S+I R++ ++
Sbjct: 58 RIATLQSVQKSVPGSDYSDQIRDLLKAAFDLRGLIETLAHGGIPFYDPSTIMPRIKLVAT 117
Query: 115 AIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVIN 174
+ I +TT L +KV AH ++G +TK V+ +P ++ + A+ +KA EKV
Sbjct: 118 TVDTIHTATTTLQNKVRPAHVELGLEVTKAVLLTANPASTAKELDAEGAALKARLEKVSQ 177
Query: 175 YPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPT 234
YPDL P D AT+Y + +K IW R +RD+ +LG K VY LN AIT AVGV+L+P
Sbjct: 178 YPDLTPNDVATVYVRTNFSKTIWQVRADRDRYILGHKSAAVYKTLNHAITKAVGVRLDPK 237
Query: 235 TTVQQVDDEVIAVQDALETALKS 257
TTV + + A +TA S
Sbjct: 238 TTVGNIQAARTELLAAYQTAFNS 260
>dbj|BAE25680.1| unnamed protein product [Mus musculus]
Length = 278
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 39 MNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAID---AVDHMKSSIRFN 95
+ +Q +R AL +++ + +AI IE + A+D A+D +I
Sbjct: 55 LTTDQIKAERSALNSRINMLQETQKAIPGSQYADQIEDLIKTALDLSGAID----TIAHG 110
Query: 96 TETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASV 155
YD ++I R+ DA AI T L HKV+KAH ++G I K I I+P +SV
Sbjct: 111 GVPAYDPATIVPRIHLAIDAADAIKTGNTTLQHKVKKAHVELGLEIAKASIVAINPASSV 170
Query: 156 DAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDV 215
++ +++ +KA +KV YPDL D ATI K L K I R+ R+K ++G K V
Sbjct: 171 AQVQDEIKALKARIDKVSAYPDLSKDDTATIAYKQTLRKTIHEVRVGRNKNIVGKKDQAV 230
Query: 216 YNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
+ LNK I+ A V+ N +TV QVD V ++ A +TAL
Sbjct: 231 VDTLNKEISKADKVRANAKSTVAQVDTAVDQLRAAYQTAL 270
>gb|AAX14383.1| cAMP factor 4 [Propionibacterium acnes]
Length = 267
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 39 MNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAID---AVDHMKSSIRFN 95
+ +Q +R AL +++ + +AI IE + A+D A+D +I
Sbjct: 44 LTTDQIKAERSALNSRINMLQETQKAIPGSQYADQIEDLIKTALDLSGAID----TIAHG 99
Query: 96 TETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASV 155
YD ++I R+ DA AI T L HKV+KAH ++G I K I I+P +SV
Sbjct: 100 GVPAYDPATIVPRIHLAIDAADAIKTGNTTLQHKVKKAHVELGLEIAKASIVAINPASSV 159
Query: 156 DAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDV 215
++ +++ +KA +KV YPDL D ATI K L K I R+ R+K ++G K V
Sbjct: 160 AQVQDEIKALKARIDKVSAYPDLSKDDTATIAYKQTLRKTIHEVRVGRNKNIVGKKDQAV 219
Query: 216 YNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
+ LNK I+ A V+ N +TV QVD V ++ A +TAL
Sbjct: 220 VDTLNKEISKADKVRANAKSTVAQVDTAVDQLRAAYQTAL 259
>gb|AAX14388.1| cAMP factor 4 [Propionibacterium acnes]
Length = 267
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 39 MNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAID---AVDHMKSSIRFN 95
+ +Q +R AL +++ + +AI IE + A+D A+D +I
Sbjct: 44 LTTDQIKAERSALNSRINMLQETQKAIPGSQYADQIEDLIKTALDLSGAID----TIAHG 99
Query: 96 TETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASV 155
YD ++I R+ DA AI T L HKV+KAH ++G I K I I+P +SV
Sbjct: 100 GVPAYDPATIVPRIHLAIDAADAIKTGNTTLQHKVKKAHVELGLEIAKASIVAINPASSV 159
Query: 156 DAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDV 215
++ +++ +KA +KV YPDL D ATI K L K I R+ R+K ++G K V
Sbjct: 160 AQVQDEIKALKARIDKVSAYPDLSKDDTATIAYKQTLRKTIHEVRVGRNKNIVGKKDQAV 219
Query: 216 YNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
+ LNK I+ A V+ N +TV QVD V ++ A +TAL
Sbjct: 220 VDTLNKEISKADKVRANAKSTVAQVDTAVDQLRAAYQTAL 259
>ref|YP_055938.1| CAMP factor [Propionibacterium acnes KPA171202]
gb|AAT82980.1| CAMP factor [Propionibacterium acnes KPA171202]
Length = 267
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 39 MNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAID---AVDHMKSSIRFN 95
+ +Q +R AL +++ + +AI IE + A+D A+D +I
Sbjct: 44 LTTDQIKAERSALNSRINMLQETQKAIPGSQYADQIEDLIKTALDLSGAID----TIAHG 99
Query: 96 TETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASV 155
YD ++I R+ DA AI T L HKV+KAH ++G I K I I+P +SV
Sbjct: 100 GVPAYDPATIVPRIHLAIDAADAIKTGNTTLQHKVKKAHVELGLEIAKASIVAINPASSV 159
Query: 156 DAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDV 215
++ +++ +KA +KV YPDL D ATI K L K I R+ R+K ++G K V
Sbjct: 160 AQVQDEIKALKARIDKVSAYPDLSKDDTATIAYKQTLRKTIHEVRVGRNKNIVGKKDQAV 219
Query: 216 YNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
+ LNK I+ A V+ N +TV QVD V ++ A +TAL
Sbjct: 220 VDTLNKEISKADKVRANAKSTVAQVDTAVDQLRAAYQTAL 259
>gb|AAV84919.1| Camp4 [Propionibacterium acnes]
Length = 261
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 39 MNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDIETTVNKAID---AVDHMKSSIRFN 95
+ +Q +R AL +++ + +AI IE + A+D A+D +I
Sbjct: 38 LTTDQIKAERSALNSRINMLQETQKAIPGSQYADQIEDLIKTALDLSGAID----TIAHG 93
Query: 96 TETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASV 155
YD ++I R+ DA AI T L HKV+KAH ++G I K I I+P +SV
Sbjct: 94 GVPAYDPATIVPRIHLAIDAADAIKTGNTTLQHKVKKAHVELGLEIAKASIVAINPASSV 153
Query: 156 DAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDV 215
++ +++ +KA +KV YPDL D ATI K L K I R+ R+K ++G K V
Sbjct: 154 AQVQDEIKALKARIDKVSAYPDLSKDDTATIAYKQTLRKTIHEVRVGRNKNIVGKKDQAV 213
Query: 216 YNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETAL 255
+ LNK I+ A V+ N +TV QVD V ++ A +TAL
Sbjct: 214 VDTLNKEISKADKVRANAKSTVAQVDTAVDQLRAAYQTAL 253
>ref|YP_001692416.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
dbj|BAG08526.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length = 571
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Query: 98 TIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDA 157
+IYD ++I RV+ + +AI F+TT+L++KV AHT + I ++ ++PFAS
Sbjct: 108 SIYDLTTIPVRVQLMIRIGRAIRFATTELSNKVIAAHTKITEYIITGILYAVNPFASEQQ 167
Query: 158 IKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYN 217
I +Q LE+++++YPDL P D ATIY KA + + I + R + F V +
Sbjct: 168 IMEYIQRFDQLEQELLSYPDLGPNDIATIYKKAAVWREIREAKKVRSSRTRFGNSFIVRD 227
Query: 218 RLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALE 252
L++ I+ VG+Q T ++DD+V + A+E
Sbjct: 228 -LSEEISKTVGLQFRITVKCGELDDQVKKLHAAME 261
>gb|AAX14380.1| cAMP factor 1 [Propionibacterium acnes]
gb|AAX14385.1| cAMP factor 1 [Propionibacterium acnes]
Length = 285
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 102 FSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQ 161
SI RVE L + + + L K + AH+ + + + ++ A+ D +K +
Sbjct: 110 LKSIPTRVELLVTMVDTVNGAAHTLQDKAQPAHSHVFLELVHASVLLVAVSATSDQLKDE 169
Query: 162 VQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNK 221
+ +K + PD++P D AT YTKAKL + + R +R+ VL K L++
Sbjct: 170 MAAVKKALAEAQKMPDIKPNDGATFYTKAKLARVLRQIRFDRNTCVLPFKRLGTIYFLSR 229
Query: 222 AITHAVGVQLNPTTTVQQVDDEVIAVQDALETALKS 257
A+ A GV + P V +VD + V+ A + ALK+
Sbjct: 230 ALLKATGVLMEPLVRVSEVDQAITDVKAAYQDALKA 265
>ref|YP_001692415.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
dbj|BAG08525.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length = 325
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 83 DAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAIT 142
D +D ++++ IYD SSI R+ L +AI F+TTQL +KV+ AH ++ I
Sbjct: 88 DKID--QTAVGMGVADIYDLSSIPQRLLLLGRMGRAIRFATTQLRYKVDAAHAEIAEYIF 145
Query: 143 KLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLE 202
+ PF +V+ +K + + ++L +K+++YPD D A IY ++ L+ + R
Sbjct: 146 GGFVIAASPFHTVEDMKVYMAQFESLSQKLLSYPDAGLNDTANIYVRSDLDHKLAKARSL 205
Query: 203 RDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQV 240
+ ++ + V ++LN I ++L P TV ++
Sbjct: 206 KYHELKNMSG-AVIDKLNAEIHEITLMRLRPQETVAEI 242
>ref|YP_056047.1| CAMP factor [Propionibacterium acnes KPA171202]
gb|AAT83089.1| CAMP factor [Propionibacterium acnes KPA171202]
Length = 285
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 7/173 (4%)
Query: 85 VDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKL 144
V+ +K I F SI RVE L + + + L K + AH+ + +
Sbjct: 100 VNVIKGGIAF-------LKSIPTRVELLVTMVDTVNGAAHTLQDKAQPAHSHVFLELVHA 152
Query: 145 VIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERD 204
+ ++ A+ D +K ++ +K + PDL+P D AT YTK KL++ + R +R+
Sbjct: 153 SVLLVTVSATSDQLKDEMAAVKKALAEAQKMPDLKPNDVATFYTKTKLSRVLRQIRFDRN 212
Query: 205 KKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALKS 257
VL K +++A+ A GV + P V +VD + V+ A + ALK+
Sbjct: 213 TCVLPFKRLGTIYFMSRALLKATGVLMEPLVRVSEVDQAITDVKAAYQDALKA 265
>gb|AAS92206.1| camp factor-1 [Propionibacterium acnes]
Length = 285
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 7/173 (4%)
Query: 85 VDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKL 144
V+ +K I F SI RVE L + + + L K + AH+ + +
Sbjct: 100 VNVIKGGIAF-------LKSIPTRVELLVTMVDTVNGAAHTLQDKAQPAHSHVFLELVHA 152
Query: 145 VIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERD 204
+ ++ A+ D +K ++ +K + PDL+P D AT YTK KL++ + R +R+
Sbjct: 153 SVLLVTVSATSDQLKDEMAAVKKALAEAQKMPDLKPNDVATFYTKTKLSRVLRQIRFDRN 212
Query: 205 KKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQDALETALKS 257
VL K +++A+ A GV + P V +VD + V+ A + ALK+
Sbjct: 213 TCVLPFKRLGTIYFMSRALLKATGVLMEPLVRVSEVDQAITDVKAAYQDALKA 265
>ref|YP_055905.1| CAMP factor [Propionibacterium acnes KPA171202]
gb|AAT82947.1| CAMP factor [Propionibacterium acnes KPA171202]
Length = 281
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 4/251 (1%)
Query: 10 STVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQR--DALVQKLDEGHQQLEAIKH 67
+ +VAG AL T S A A+ P +++N A+ + + + ++ + L+ K
Sbjct: 8 APLVAG-ALMVPATLSTPAAQAAVPTIPAVSSNTADAHKLLEGVNGRITSLNDDLKVAKA 66
Query: 68 EAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFS-SIGARVEALSDAIKAIVFSTTQL 126
++ T+ + +K+ + + + F+ SI ARVE +T L
Sbjct: 67 SLSPMEVIDTIADLLKQAKQLKAQLEKIVKGVVTFAKSIPARVELFLAMCDTTHTATLTL 126
Query: 127 THKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATI 186
KV+ AH+ + AI + +I ++ + +V +K PDL+PTD AT
Sbjct: 127 QDKVQNAHSTVFLAIAHAINVLITINSTPAQLTDEVAALKKAIAAAQAMPDLKPTDVATK 186
Query: 187 YTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIA 246
Y +AKL + + R +R+ V+ K D LN+AI A V+ N V VD +
Sbjct: 187 YVRAKLGRLMVQVRFDRNTCVINYKDRDAVRLLNRAIIRAGQVRSNAWVRVADVDQAIKE 246
Query: 247 VQDALETALKS 257
++ A + ALK+
Sbjct: 247 LKAAYQDALKA 257
>gb|AAX14384.1| cAMP factor 5 [Propionibacterium acnes]
gb|AAX14389.1| cAMP factor 5 [Propionibacterium acnes]
Length = 281
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 113/251 (45%), Gaps = 8/251 (3%)
Query: 10 STVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQR--DALVQKLDEGHQQLEAIKH 67
+ +VAG AL T S A A+ P +++N A+ + + + ++ + L+ K
Sbjct: 8 APLVAG-ALMVPATLSTPAAQAAIPTIPAVSSNTADAHKLLEDVNGRITSLNDDLKVAKA 66
Query: 68 EAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFS-SIGARVEALSDAIKAIVFSTTQL 126
++ T+ + +K+ + + + F+ SI ARVE +T L
Sbjct: 67 SLSPMEVIDTIADLLKQAKQLKAQLEKIVKGVVTFAKSIPARVELFLAMCDTTHTATLTL 126
Query: 127 THKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATI 186
KV+ AH+ + AI + +I ++ + +V +K PDL+PTD AT
Sbjct: 127 QDKVQNAHSTVFLAIAHAINVLITINSTPAQLTDEVAALKKAIAAAQAMPDLKPTDVATK 186
Query: 187 YTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEV-- 244
Y +AKL + I R +R+ V+ K D LN+AI A V+ N V VD +
Sbjct: 187 YVRAKLGRLIVQVRFDRNTCVINYKDRDTVRLLNRAIIRAGQVRSNAWVRVADVDQAIKE 246
Query: 245 --IAVQDALET 253
A QDAL+T
Sbjct: 247 LKAAYQDALKT 257
>gb|AAV84920.1| Camp5 [Propionibacterium acnes]
Length = 281
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 4/251 (1%)
Query: 10 STVVAGLALFSTMTHSVLADDASNPDAILMNNNQANFQR--DALVQKLDEGHQQLEAIKH 67
+ +VAG AL T S A A+ P +++N A+ + + + ++ + L+ K
Sbjct: 8 APLVAG-ALMVPATLSTPAAQAAVPTIPAVSSNTADAHKLLEGVNGRITSLNDDLKVAKA 66
Query: 68 EAKGTDIETTVNKAIDAVDHMKSSIRFNTETIYDFS-SIGARVEALSDAIKAIVFSTTQL 126
++ T+ + +K+ + + + F+ SI ARVE +T
Sbjct: 67 SLSPMEVIDTIADLLKQAKQLKAQLEKIVKGVVTFAKSIPARVELFLAMCDTTHTATLTF 126
Query: 127 THKVEKAHTDMGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATI 186
KV+ AH+ + AI + +I ++ + +V +K PDL+PTD AT
Sbjct: 127 QDKVQNAHSTVFLAIAHAINVLITINSTPAQLTDEVAALKKAIAAAQAMPDLKPTDVATK 186
Query: 187 YTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIA 246
Y +AKL + + R +R+ V+ K D LN+AI A V+ N V VD +
Sbjct: 187 YVRAKLGRLMVQVRFDRNTCVINYKDRDAVRLLNRAIIRAGQVRSNAWVRVADVDQAIKE 246
Query: 247 VQDALETALKS 257
++ A + ALK+
Sbjct: 247 LKAAYQDALKA 257
>ref|ZP_01693923.1| hypothetical protein M23134_06052 [Microscilla marina ATCC 23134]
gb|EAY25064.1| hypothetical protein M23134_06052 [Microscilla marina ATCC 23134]
Length = 186
Score = 37.7 bits (86), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 147 RIIDPFASVDAIKA---------QVQEIKALEEKVINYPDLQPTD-RATIYTKAKLNKAI 196
+++ PFA + +A Q EI L ++ LQPT+ + +YT K+NK +
Sbjct: 87 KVVYPFAKLTGKRAIVIFYYTADQGGEIIYLSATALHKKKLQPTNIQRYLYTHGKINKTV 146
Query: 197 WNTRLERDKK 206
+ + L RDKK
Sbjct: 147 YTSTLSRDKK 156
>ref|XP_001201577.1| PREDICTED: similar to transposase [Strongylocentrotus purpuratus]
ref|XP_001190755.1| PREDICTED: similar to transposase [Strongylocentrotus purpuratus]
Length = 712
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 140 AITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNT 199
++ K V R I P +SVD A++ ++TI+TK N W
Sbjct: 215 SLNKAVEREIHPMSSVDESLAKL-------------------GKSTIFTKLDANSGFWQI 255
Query: 200 RLERDKKVLG--IKPFD--VYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQD 249
LE + K+L + PF +NRL IT A V +T+ + D VI D
Sbjct: 256 PLEDESKLLTTFVTPFGRFCFNRLPFGITSAPEVFQRAMSTILEGLDGVICHMD 309
>ref|ZP_02948298.1| HD-GYP hydrolase domain containing protein [Clostridium butyricum
5521]
gb|EDT76713.1| HD-GYP hydrolase domain containing protein [Clostridium butyricum
5521]
Length = 369
Score = 35.4 bits (80), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 93 RFNTETIYDFSSIGARVEALSD-----AIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIR 147
R E I D S I + +A + K +F + L + + A T + + + R
Sbjct: 243 RLTDENIIDLSKIVSIADAYDNLSTDLPGKRAMFPSDVLEYLMSNAGTMFDYNLISVFCR 302
Query: 148 IIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDR 183
II PF ++ +EI +EE + N+P L+P R
Sbjct: 303 IIIPFPKGTVVRLSTEEIARVEETIPNFP-LRPILR 337
>ref|XP_780067.2| PREDICTED: similar to transposase [Strongylocentrotus purpuratus]
ref|XP_001187341.1| PREDICTED: similar to transposase [Strongylocentrotus purpuratus]
Length = 991
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 140 AITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNT 199
++ K V R I P +SVD A++ ++TI+TK N W
Sbjct: 164 SLNKAVEREIHPMSSVDESLAKL-------------------GKSTIFTKLDANSGFWQI 204
Query: 200 RLERDKKVLG--IKPFD--VYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQD 249
LE + K+L + PF +NRL IT A V +T+ + D VI D
Sbjct: 205 PLEDESKLLTTFVTPFGRFCFNRLPFGITSAPEVFQRAMSTILEGLDGVICHMD 258
>dbj|BAC83223.1| putative resistance complex protein I2C-2 [Oryza sativa Japonica
Group]
Length = 1237
Score = 34.3 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 15 GLALFSTMTHSVLADDASNPDAILMNNNQANFQRDALVQKLDEGHQQLEAIKHEAKGTDI 74
GL + + +V+A+ S ++L +N + ++ L+ ++EA+ A+ I
Sbjct: 5 GLVVGGWIAKAVIANILSRVRSLLHDNFSLQKDTEKMLNDLEVALPRIEAVIEAAERRSI 64
Query: 75 ETT-----VNKAIDAVDHMKSSIR-FNTETIYD----FSSIGARVEALSDAIKAIVFSTT 124
E++ + + DAV H + F +TI D S + A+ + A+KA+VFS +
Sbjct: 65 ESSALSTWLQQLKDAVSHAGDVVDDFEAKTIKDQVESKSKVSAKAYSTVKALKALVFSDS 124
Query: 125 QL 126
+L
Sbjct: 125 EL 126
>ref|XP_001191653.1| PREDICTED: similar to transposase [Strongylocentrotus purpuratus]
Length = 1372
Score = 34.3 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 140 AITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNT 199
++ K V R I P +SVD A++ ++TI+TK N W
Sbjct: 467 SLNKAVEREIHPMSSVDESLAKL-------------------GKSTIFTKLDANSGFWQI 507
Query: 200 RLERDKKVLG--IKPFD--VYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQD 249
LE + K+L + PF +NRL IT A V +T+ + D VI D
Sbjct: 508 PLEDESKLLTTFVTPFGRFCFNRLPFGITSAPEVFQRAMSTILEGLDGVICHMD 561
>ref|XP_793701.2| PREDICTED: similar to transposase [Strongylocentrotus purpuratus]
Length = 1294
Score = 34.3 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 140 AITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNT 199
++ K V R I P +SVD A++ ++TI+TK N W
Sbjct: 467 SLNKAVEREIHPMSSVDESLAKL-------------------GKSTIFTKLDANSGFWQI 507
Query: 200 RLERDKKVLG--IKPFD--VYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQD 249
LE + K+L + PF +NRL IT A V +T+ + D VI D
Sbjct: 508 PLEDESKLLTTFVTPFGRFCFNRLPFGITSAPEVFQRAMSTILEGLDGVICHMD 561
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 2,222,278,849
Number of sequences in database: 6,515,104
Lambda K H
0.316 0.130 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6515104
Number of Hits to DB: 978,245,367
Number of extensions: 35909519
Number of successful extensions: 119687
Number of sequences better than 10.0: 152
Number of HSP's gapped: 121467
Number of HSP's successfully gapped: 154
Length of query: 257
Length of database: 2,222,278,849
Length adjustment: 131
Effective length of query: 126
Effective length of database: 1,368,800,225
Effective search space: 172468828350
Effective search space used: 172468828350
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)