D simple

DTASelect v1.9
/home/51n/myMS/article/dbdigger/extendPSM/tryptic/simple
/home/51n/myMS/db/extendPsmDB/20040623-Scale-4490.fasta
DBDigger 0.5 in SQT format.
-1 25.32759 -2 33.56178 -3 36.8412 --DB -d 0 -p 2
Jump to the summary table.

sequest.params modifications:

true	Use criteria
25.32759	Minimum +1 XCorr
33.56178	Minimum +2 XCorr
36.8412	Minimum +3 XCorr
0.0	Minimum DeltCN
1	Minimum charge state
3	Maximum charge state
0.0	Minimum ion proportion
1000	Maximum Sp rank
-1.0	Minimum Sp score
Include	Modified peptide inclusion
Any	Tryptic status requirement
true	Multiple, ambiguous IDs allowed
Ignore	Peptide validation handling
XCorr	Purge duplicate peptides by protein
false	Include only loci with unique peptide
false	Remove subset proteins
Ignore	Locus validation handling
0	Minimum modified peptides per locus
10	Minimum redundancy for low coverage loci
2	Minimum peptides per locus

Locus Key:

Validation Status

Locus

Sequence Count

Spectrum Count

Sequence Coverage

Length

MolWt

Descriptive Name

Similarity Key:

Locus

# of identical peptides

# of differing peptides

std_sp|P02866|CONA_CANEN

80.2%

237

25598

5.6

Concanavalin A precursor (Con A) - Canavalia ensiformis (Jack bean) (Horse bean). clipped MAISKKSSLFLPIFTFITMFLMVVNKVSS VIRNSTTIDFNAAYN EIPDIATVV

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2022.2022.3	65.0116	0.642843	3243.98	3244.58	1	253.0	65.8%	3	-.ADTIVAVELDTYPNTDIGDPSYPHIGIDIK.S	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.822.822.2	70.2154	0.570764	1417.39	1417.61	1	236.0	87.0%	1	K.VGTAHIIYNSVDK.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.823.823.3	59.9719	0.521821	1418.48	1417.61	1	146.0	78.0%	1	K.VGTAHIIYNSVDK.R	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.707.707.3	67.285	0.632464	1573.88	1573.79	1	204.0	79.1%	2	K.VGTAHIIYNSVDKR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2232.2232.2	58.2953	0.483621	3294.99	3296.62	1	111.0	69.0%	1	R.LSAVVSYPNADSATVSYDVDLDNVLPEWVR.V	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2227.2227.3	39.8059	0.234714	3295.58	3296.62	1	41.0	53.8%	1	R.LSAVVSYPNADSATVSYDVDLDNVLPEWVR.V	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1002.1002.1	40.5869	0.529924	1095.6	1096.27	1	163.0	77.8%	1	R.VGLSASTGLYK.E	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1003.1003.2	57.8003	0.664101	1097.79	1096.27	1	232.0	85.0%	1	R.VGLSASTGLYK.E	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2104.2104.3	58.4068	0.522235	2591.18	2591.92	1	175.0	69.6%	2	R.VGLSASTGLYKETNTILSWSFTSK.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2080.2080.2	62.6455	0.619189	2591.59	2591.92	1	243.0	67.9%	1	R.VGLSASTGLYKETNTILSWSFTSK.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1488.1488.3	68.0597	0.619087	2481.98	2482.78	1	199.0	61.5%	1	K.LKSNSTHETNALHFMFNQFSK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1574.1574.3	62.8176	0.595245	2241.38	2241.45	1	215.0	70.0%	1	K.SNSTHETNALHFMFNQFSK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2643.2643.2	50.3492	0.564141	2103.99	2104.28	1	211.0	60.6%	1	K.DLILQGDATTGTDGNLELTR.V	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.437.437.2	36.416	0.387861	1319.79	1319.37	1	144.0	52.0%	1	R.VSSNGSPQGSSVGR.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2132.2132.3	41.7072	0.422553	2835.38	2834.03	1	196.0	48.7%	1	K.SPDSHPADGIAFFISNIDSSIPSGSTGR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1827.1827.1	40.8846	0.531709	959.6	960.118	1	227.0	92.9%	2	R.LLGLFPDAN.-	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1807.1807.2	51.1874	0.569172	959.992	960.118	1	244.0	81.2%	1	R.LLGLFPDAN.-	2

std_gi|2506462|sp|P02188|MYG_HORSE

64.7%

153

16951

7.8

MYOGLOBIN gi|494712|pdb|1YMB| Metmyoglobin (Horse Heart) gi|494713|pdb|1YMC| Cyanomet-Sulfmyoglobin (Horse Heart) gi|2914628|pdb|1WLA| Myoglobin (Horse Heart) Recombinant Wild-Type gi|2982074|pdb|1AZI| Myoglobin (Horse Heart) Recombinant Wild-Type Complexed With Azide [MASS=16951]

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2044.2044.1	42.0027	0.534691	1815.8	1817.01	1	136.0	69.6%	1	-.GLSDGEWQQVLNVWGK.V	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2032.2032.2	90.0548	0.703486	1816.79	1817.01	1	251.0	95.8%	2	-.GLSDGEWQQVLNVWGK.V	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1079.1079.2	81.2446	0.63094	1607.79	1607.81	1	229.0	85.7%	1	K.VEADIAGHGQEVLIR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1083.1083.3	69.3397	0.595261	1608.08	1607.81	1	220.0	81.2%	1	K.VEADIAGHGQEVLIR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.805.805.1	43.541	0.51481	1271.8	1272.44	1	240.0	82.4%	1	R.LFTGHPETLEK.F	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.799.799.2	62.4627	0.627472	1272.19	1272.44	1	210.0	100.0%	1	R.LFTGHPETLEK.F	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.797.797.3	48.1643	0.452976	1273.88	1272.44	1	182.0	67.6%	2	R.LFTGHPETLEK.F	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.413.413.3	55.673	0.465317	1983.68	1983.24	1	221.0	69.1%	1	K.KGHHEAELKPLAQSHATK.H	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.434.434.2	67.7181	0.604712	1854.19	1855.06	1	166.0	84.6%	1	K.GHHEAELKPLAQSHATK.H	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.433.433.3	53.6568	0.475973	1855.88	1855.06	1	109.0	74.5%	1	K.GHHEAELKPLAQSHATK.H	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2289.2289.2	81.3244	0.681491	1885.79	1886.2	1	185.0	85.2%	1	K.YLEFISDAIIHVLHSK.H	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2288.2288.3	60.011	0.519608	1888.88	1886.2	1	216.0	74.5%	2	K.YLEFISDAIIHVLHSK.H	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.802.802.2	74.1817	0.737164	1503.19	1503.64	1	38.0	92.3%	1	K.HPGDFGADAQGAMTK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.907.907.1	39.4254	0.635026	941.5	942.059	1	193.0	92.3%	1	K.YKELGFQG.-	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.908.908.2	46.2433	0.489562	943.192	942.059	1	197.0	80.0%	1	K.YKELGFQG.-	2

std_UniRef100_P01958

62.4%

141

15114

8.7

Hemoglobin alpha chains [Equus caballus]

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.804.804.2	75.26	0.606701	1516.19	1516.61	1	230.0	88.0%	1	K.VGGHAGEYGAEALER.M	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.803.803.3	65.1371	0.445195	1516.88	1516.61	1	255.0	78.7%	1	K.VGGHAGEYGAEALER.M	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1508.1508.1	43.1131	0.657258	1041.5	1042.29	1	184.0	92.9%	1	R.MFLGFPTTK.T	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1507.1507.2	53.7575	0.544606	1042.19	1042.29	1	230.0	100.0%	2	R.MFLGFPTTK.T	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1319.1319.2	68.1249	0.714931	1834.79	1835.03	1	59.0	80.8%	1	K.TYFPHFDLSHGSAQVK.A	2 2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1318.1318.3	64.0099	0.586516	1835.48	1835.03	1	208.0	76.5%	2	K.TYFPHFDLSHGSAQVK.A	3 3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2123.2123.3	68.2927	0.598649	2951.48	2951.31	1	248.0	72.2%	1	K.VGDALTLAVGHLDDLPGALSNLSDLHAHK.L	3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.793.793.1	27.9018	0.180604	818.5	818.948	1	168.0	81.8%	1	R.VDPVNFK.L	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.789.789.2	36.5584	0.220676	819.192	818.948	1	144.0	84.6%	1	R.VDPVNFK.L	2 2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1414.1414.1	40.9335	0.533541	1268.7	1269.48	1	138.0	83.3%	1	K.FLSSVSTVLTSK.Y	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1413.1413.2	66.8716	0.590163	1269.39	1269.48	1	195.0	86.4%	1	K.FLSSVSTVLTSK.Y	2

Similarities: std_gi|122361|sp|P01966|HBA_BOVIN(4:7)

std_sp|P00006|CYC_BOVIN

61.5%

104

11572

9.5

Cytochrome c - Bos taurus (Bovine), Sus scrofa (Pig), and Ovis aries (Sheep).

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.845.845.3	45.1856	0.506644	1435.58	1434.64	1	245.0	62.8%	1	K.HKTGPNLHGLFGR.K	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1233.1233.1	28.8869	0.425918	1168.7	1169.33	1	18.0	70.6%	1	K.TGPNLHGLFGR.K	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1227.1227.2	55.3116	0.627663	1169.59	1169.33	1	200.0	80.0%	2	K.TGPNLHGLFGR.K	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.980.980.3	51.2088	0.463987	1299.38	1297.5	1	178.0	71.4%	1	K.TGPNLHGLFGRK.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.674.674.2	84.0463	0.579218	1585.79	1585.71	1	172.0	92.3%	1	R.KTGQAPGFSYTDANK.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.673.673.3	49.4307	0.452529	1586.18	1585.71	1	173.0	72.3%	1	R.KTGQAPGFSYTDANK.N	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.577.577.2	59.792	0.575098	1827.59	1827.99	1	152.0	69.0%	1	R.KTGQAPGFSYTDANKNK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.572.572.3	73.2683	0.5388	1828.28	1827.99	1	235.0	74.1%	1	R.KTGQAPGFSYTDANKNK.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.849.849.1	40.5874	0.502951	1456.6	1457.54	1	138.0	75.0%	1	K.TGQAPGFSYTDANK.N	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.847.847.2	75.062	0.688021	1456.99	1457.54	1	156.0	95.7%	2	K.TGQAPGFSYTDANK.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.678.678.2	70.5061	0.665776	1700.19	1699.82	1	150.0	88.5%	1	K.TGQAPGFSYTDANKNK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.677.677.3	50.5206	0.4469	1700.48	1699.82	1	192.0	79.2%	1	K.TGQAPGFSYTDANKNK.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2014.2014.3	42.463	0.325149	2254.88	2253.54	1	176.0	67.9%	1	K.NKGITWGEETLMEYLENPK.K	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1862.1862.3	87.7608	0.651911	2382.08	2381.71	1	221.0	75.4%	1	K.NKGITWGEETLMEYLENPKK.Y	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2152.2152.2	83.3665	0.644973	2010.79	2011.26	1	174.0	88.5%	2	K.GITWGEETLMEYLENPK.K	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2153.2153.3	85.9062	0.64382	2011.58	2011.26	1	255.0	84.9%	2	K.GITWGEETLMEYLENPK.K	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1987.1987.2	79.381	0.631274	2138.79	2139.43	1	213.0	82.1%	2	K.GITWGEETLMEYLENPKK.Y	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1984.1984.3	55.1803	0.476487	2139.38	2139.43	1	96.0	71.4%	2	K.GITWGEETLMEYLENPKK.Y	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.848.848.1	34.4347	0.360639	907.6	908.196	1	153.0	92.3%	1	K.MIFAGIKK.K	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.842.842.2	44.6393	0.27336	908.192	908.196	1	134.0	81.2%	1	K.MIFAGIKK.K	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1518.1518.1	39.9513	0.377784	964.7	965.135	1	208.0	91.7%	1	R.EDLIAYLK.K	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1520.1520.2	44.8087	0.493698	964.992	965.135	1	145.0	86.7%	1	R.EDLIAYLK.K	2

std_gi|2190337|sp|P02769|gnl|PID|e321614

61.2%

583

66463

5.9

(X58989) serum albumin [Bos taurus] gi|3336842|gnl|PID|e1311980 (Y17769) bovine serum albumin [Bos taurus] [MASS=69323] clipped MKWVTFISLLLLFSSAYSRGVFRR

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.725.725.1	29.8503	0.375517	1249.6	1250.4	1	188.0	64.3%	1	R.FKDLGEEHFK.G	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.737.737.2	65.0642	0.535759	1250.19	1250.4	1	217.0	88.9%	1	R.FKDLGEEHFK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.732.732.3	52.5108	0.351717	1251.38	1250.4	1	59.0	76.7%	1	R.FKDLGEEHFK.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1334.1334.1	40.6531	0.541847	1163.6	1164.34	1	70.0	75.0%	1	K.LVNELTEFAK.T	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1332.1332.2	61.46	0.525627	1164.39	1164.34	1	186.0	88.9%	2	K.LVNELTEFAK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1440.1440.1	58.1181	0.665714	1362.7	1363.58	1	189.0	88.9%	1	K.SLHTLFGDELCK.V	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1465.1465.2	60.9842	0.669889	1363.19	1363.58	1	105.0	81.8%	2	K.SLHTLFGDELCK.V	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1434.1434.3	57.6399	0.5297	1363.58	1363.58	1	147.0	81.1%	2	K.SLHTLFGDELCK.V	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.965.965.3	53.5892	0.455108	2485.88	2485.69	1	6.0	73.4%	1	K.QEPERNECFLSHKDDSPDLPK.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.984.984.2	43.0089	0.550385	1845.79	1846.03	1	150.0	60.9%	1	R.NECFLSHKDDSPDLPK.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.978.978.3	47.7801	0.394796	1846.58	1846.03	1	189.0	58.3%	1	R.NECFLSHKDDSPDLPK.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1353.1353.2	61.9359	0.589529	1520.79	1520.75	1	160.0	79.2%	1	K.LKPDPNTLCDEFK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1360.1360.3	44.1738	0.296932	1964.48	1964.2	1	176.0	69.2%	3	K.LKPDPNTLCDEFKADEK.K	3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.992.992.1	34.1724	0.343241	927.6	928.076	1	50.0	90.9%	1	K.YLYEIAR.R	1 1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1595.1595.3	75.6789	0.6185	2046.68	2046.34	1	251.0	87.2%	1	R.RHPYFYAPELLYYANK.Y	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1750.1750.3	43.5016	0.424188	2319.08	2317.67	1	106.0	63.1%	1	K.YNGVFQECCQAEDKGACLLPK.I	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.767.767.2	50.4561	0.39299	923.592	923.054	1	179.0	86.7%	1	K.AEFVEVTK.L	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.702.702.1	37.2496	0.324759	789.6	789.948	1	221.0	90.9%	1	K.LVTDLTK.V	1 1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.815.815.3	60.7449	0.530226	1943.48	1944.18	1	188.0	67.8%	1	K.VHKECCHGDLLECADDR.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.818.818.2	92.61	0.712374	1943.59	1944.18	1	158.0	89.3%	1	K.VHKECCHGDLLECADDR.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.758.758.1	39.0417	0.406664	1386.6	1387.51	1	176.0	77.8%	1	K.YICDNQDTISSK.L	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.748.748.2	70.2783	0.0130937	1386.99	1387.51	1	143.0	100.0%	2	K.YICDNQDTISSK.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.697.697.2	72.1833	0.582008	1419.39	1419.75	1	220.0	90.5%	2	K.LKECCDKPLLEK.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.668.668.3	59.7132	0.43181	1420.88	1419.75	1	178.0	77.5%	2	K.LKECCDKPLLEK.S	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1709.1709.3	42.2329	0.422083	3399.38	3399.82	1	159.0	58.2%	1	K.SHCIAEVEKDAIPENLPPLTADFAEDKDVCK.N	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1710.1710.2	55.3271	0.586305	2402.19	2402.68	1	132.0	66.7%	1	K.DAIPENLPPLTADFAEDKDVCK.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1659.1659.3	37.2837	0.350707	3136.28	3136.46	1	136.0	52.0%	1	K.DAIPENLPPLTADFAEDKDVCKNYQEAK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2013.2013.2	78.8618	0.630444	1567.99	1568.73	1	238.0	82.6%	2	K.DAFLGSFLYEYSR.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1090.1090.2	62.6976	0.669585	1441.19	1440.69	1	196.0	85.0%	1	R.RHPEYAVSVLLR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1093.1093.3	58.1412	0.486598	1441.58	1440.69	1	247.0	75.0%	1	R.RHPEYAVSVLLR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1039.1039.1	43.4591	0.535135	1305.7	1306.51	1	158.0	81.2%	1	K.HLVDEPQNLIK.Q	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1032.1032.2	60.895	0.668061	1306.79	1306.51	1	184.0	88.9%	2	K.HLVDEPQNLIK.Q	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1043.1043.3	48.9315	0.281958	1307.78	1306.51	1	117.0	64.9%	1	K.HLVDEPQNLIK.Q	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1412.1412.3	70.3915	0.615859	2300.48	2299.57	1	190.0	70.0%	1	K.HLVDEPQNLIKQNCDQFEK.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1580.1580.2	79.7785	0.637079	1482.19	1480.71	1	218.0	100.0%	2	K.LGEYGFQNALIVR.Y	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1179.1179.1	41.3263	0.590148	1640.0	1640.92	1	16.0	73.9%	1	R.KVPQVSTPTLVEVSR.S	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1192.1192.2	68.9656	0.574281	1640.59	1640.92	1	112.0	92.0%	2	R.KVPQVSTPTLVEVSR.S	2 2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1202.1202.3	53.855	0.467138	1641.98	1640.92	1	122.0	69.8%	2	R.KVPQVSTPTLVEVSR.S	3 3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1302.1302.2	68.385	0.658277	1512.79	1512.75	1	217.0	84.0%	1	K.VPQVSTPTLVEVSR.S	2 2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2075.2075.3	47.0259	0.334235	1669.58	1668.97	1	232.0	72.1%	1	R.MPCTEDYLSLILNR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2073.2073.2	83.0789	0.648953	1670.39	1668.97	1	251.0	100.0%	2	R.MPCTEDYLSLILNR.L	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.645.645.1	25.7583	0.463104	1024.5	1025.19	1	96.0	73.3%	1	K.CCTESLVNR.R	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.643.643.2	46.081	0.518265	1025.59	1025.19	1	60.0	81.2%	1	K.CCTESLVNR.R	2 2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1330.1330.2	59.1014	0.642801	1824.39	1825.09	1	152.0	76.9%	2	R.RPCFSALTPDETYVPK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1352.1352.3	52.0394	0.43066	1826.48	1825.09	1	124.0	72.0%	2	R.RPCFSALTPDETYVPK.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1153.1153.2	55.6894	0.503638	1145.19	1143.41	1	196.0	88.9%	1	K.KQTALVELLK.H	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1473.1473.2	34.5949	0.354542	1015.19	1015.24	1	96.0	70.6%	1	K.QTALVELLK.H	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1875.1875.2	67.5583	0.608956	1400.99	1400.64	1	185.0	90.9%	1	K.TVMENFVAFVDK.C	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2445.2445.3	60.5589	0.619486	3139.88	3139.62	1	248.0	71.8%	1	K.TVMENFVAFVDKCCAADDKEACFAVEGPK.L	3

Similarities: std_sp|P02768|ALBU_HUMAN(8:41)

std_sp|P02768|ALBU_HUMAN

60.3%

585

66472

6.0

Serum albumin precursor - Homo sapiens (Human). clipped MKWVTFISLLFLFSSAYSRGVFRR

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.895.895.1	47.904	0.460202	1226.7	1227.36	1	115.0	93.8%	1	R.FKDLGEENFK.A	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.888.888.2	65.4592	0.563258	1227.19	1227.36	1	209.0	88.9%	1	R.FKDLGEENFK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.887.887.3	49.3607	0.428384	1229.48	1227.36	1	213.0	82.4%	1	R.FKDLGEENFK.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1108.1108.1	38.8426	0.432908	1149.7	1150.32	1	137.0	81.2%	1	K.LVNEVTEFAK.T	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1107.1107.2	64.8888	0.513024	1150.99	1150.32	1	188.0	94.1%	2	K.LVNEVTEFAK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.540.540.1	49.7564	0.582331	1384.5	1385.47	1	37.0	89.5%	1	K.TCVADESAENCDK.S	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.537.537.2	66.0457	0.155377	1385.19	1385.47	1	107.0	90.9%	2	K.TCVADESAENCDK.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1645.1645.3	62.0546	0.468179	1877.78	1876.23	1	239.0	66.0%	1	K.SLHTLFGDKLCTVATLR.E	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.969.969.2	42.2377	0.519381	1321.39	1321.49	1	204.0	63.6%	1	R.ETYGEMADCCAK.Q	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.923.923.3	38.8968	0.395959	2580.98	2580.8	1	229.0	56.5%	1	K.QEPERNECFLQHKDDNPNLPR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.943.943.3	59.9135	0.542125	1940.48	1941.13	1	92.0	73.6%	1	R.NECFLQHKDDNPNLPR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.588.588.2	41.3671	0.248568	940.992	940.989	1	200.0	68.8%	1	K.DDNPNLPR.L	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.992.992.1	34.1724	0.343241	927.6	928.076	1	50.0	90.9%	1	K.YLYEIAR.R	1 1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1883.1883.2	79.391	0.730806	1899.39	1900.23	1	136.0	88.0%	1	R.RHPYFYAPELLFFAK.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1882.1882.3	84.9575	0.655382	1900.88	1900.23	1	245.0	79.2%	2	R.RHPYFYAPELLFFAK.R	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2067.2067.3	66.9487	0.550139	1744.28	1744.04	1	222.0	81.4%	2	R.HPYFYAPELLFFAK.R	3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.702.702.1	37.2496	0.324759	789.6	789.948	1	221.0	90.9%	1	K.LVTDLTK.V	1 1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1008.1008.2	84.6986	0.720852	1916.39	1917.11	1	188.0	89.3%	1	K.VHTECCHGDLLECADDR.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1007.1007.3	57.4766	0.554156	1917.38	1917.11	1	201.0	72.5%	1	K.VHTECCHGDLLECADDR.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.722.722.1	45.4998	0.523544	1386.7	1387.51	1	106.0	83.3%	1	K.YICENQDSISSK.L	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.718.718.2	74.5147	0.442217	1386.79	1387.51	1	151.0	100.0%	1	K.YICENQDSISSK.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.672.672.2	67.8113	0.584451	1433.59	1433.78	1	214.0	95.0%	2	K.LKECCEKPLLEK.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.667.667.3	59.1058	0.422904	1434.68	1433.78	1	200.0	84.6%	2	K.LKECCEKPLLEK.S	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.614.614.2	39.668	0.43409	1192.19	1192.44	1	32.0	66.7%	1	K.ECCEKPLLEK.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2058.2058.2	82.6288	0.707474	2917.99	2919.22	1	218.0	86.7%	2	K.SHCIAEVENDEMPADLPSLAADFVESK.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2049.2049.3	67.3568	0.626342	2918.18	2919.22	1	187.0	71.2%	3	K.SHCIAEVENDEMPADLPSLAADFVESK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2320.2320.2	63.2363	0.6413	1625.79	1624.9	1	215.0	78.3%	1	K.DVFLGMFLYEYAR.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.593.593.1	28.6881	0.310465	984.4	985.079	1	192.0	76.9%	1	K.TYETTLEK.C	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.598.598.2	38.6802	0.407673	984.992	985.079	1	152.0	80.0%	1	K.TYETTLEK.C	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.533.533.3	48.9922	0.436413	1384.58	1382.58	1	241.0	65.9%	2	K.CCAAADPHECYAK.V	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1812.1812.2	72.5292	0.661755	2046.99	2046.37	1	158.0	81.5%	2	K.VFDEFKPLVEEPQNLIK.Q	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1797.1797.3	66.5918	0.57633	2047.28	2046.37	1	79.0	74.1%	1	K.VFDEFKPLVEEPQNLIK.Q	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2377.2377.3	42.4348	0.366515	3627.68	3629.12	1	18.0	62.7%	1	K.VFDEFKPLVEEPQNLIKQNCELFEQLGEYK.F	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1652.1652.2	77.6327	0.669468	1601.19	1601.78	1	98.0	91.7%	1	K.QNCELFEQLGEYK.F	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2043.2043.3	52.8069	0.42018	2545.28	2543.91	1	110.0	71.9%	1	K.QNCELFEQLGEYKFQNALLVR.Y	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1029.1029.1	34.166	0.278469	961.7	961.153	1	8.0	78.6%	1	K.FQNALLVR.Y	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1037.1037.2	50.9538	0.384533	961.792	961.153	1	214.0	81.2%	1	K.FQNALLVR.Y	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1179.1179.1	41.3263	0.590148	1640.0	1640.92	1	16.0	73.9%	1	K.KVPQVSTPTLVEVSR.N	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1192.1192.2	68.9656	0.574281	1640.59	1640.92	1	112.0	92.0%	2	K.KVPQVSTPTLVEVSR.N	2 2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1202.1202.3	53.855	0.467138	1641.98	1640.92	1	122.0	69.8%	2	K.KVPQVSTPTLVEVSR.N	3 3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1302.1302.2	68.385	0.658277	1512.79	1512.75	1	217.0	84.0%	1	K.VPQVSTPTLVEVSR.N	2 2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2425.2425.2	58.5353	0.555607	2560.59	2562.05	1	194.0	72.4%	1	K.RMPCAEDYLSVVLNQLCVLHEK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2433.2433.3	74.9475	0.565615	2561.78	2562.05	1	210.0	73.9%	2	K.RMPCAEDYLSVVLNQLCVLHEK.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2505.2505.2	66.2893	0.612816	2406.79	2405.86	1	180.0	73.3%	1	R.MPCAEDYLSVVLNQLCVLHEK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2502.2502.3	70.878	0.58588	2406.98	2405.86	1	151.0	72.1%	2	R.MPCAEDYLSVVLNQLCVLHEK.T	3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.645.645.1	25.7583	0.463104	1024.5	1025.19	1	96.0	73.3%	1	K.CCTESLVNR.R	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.643.643.2	46.081	0.518265	1025.59	1025.19	1	60.0	81.2%	1	K.CCTESLVNR.R	2 2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1474.1474.3	54.6035	0.544178	1856.18	1855.12	1	182.0	65.3%	1	R.RPCFSALEVDETYVPK.E	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.920.920.2	48.6807	0.410299	1130.99	1129.39	1	196.0	77.8%	1	K.KQTALVELVK.H	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1152.1152.1	35.1981	0.265042	1000.7	1001.21	1	32.0	85.7%	1	K.QTALVELVK.H	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1149.1149.2	41.1554	0.281073	1001.19	1001.21	1	97.0	76.5%	1	K.QTALVELVK.H	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1763.1763.1	42.3682	0.473425	1342.7	1343.54	1	227.0	73.7%	1	K.AVMDDFAAFVEK.C	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1762.1762.2	73.8928	0.636144	1343.59	1343.54	1	215.0	90.5%	1	K.AVMDDFAAFVEK.C	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.489.489.3	60.7173	0.542561	1904.78	1906.17	1	247.0	74.5%	1	K.CCKADDKETCFAEEGKK.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.505.505.1	30.2134	0.329992	1570.7	1571.7	1	197.0	60.0%	1	K.ADDKETCFAEEGKK.L	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.493.493.2	68.3123	0.648392	1571.39	1571.7	1	164.0	87.0%	1	K.ADDKETCFAEEGKK.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.492.492.3	66.7819	0.588781	1572.68	1571.7	1	125.0	79.5%	1	K.ADDKETCFAEEGKK.L	3

Similarities: std_gi|2190337|sp|P02769|gnl|PID|e321614(8:49)

std_UniRef100_P02062

54.1%

146

16008

7.0

Hemoglobin beta chain [Equus caballus]

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1814.1814.3	50.5323	0.499446	2328.08	2327.6	1	187.0	60.0%	1	K.AAVLALWDKVNEEEVGGEALGR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.902.902.2	82.6987	0.587135	1359.19	1359.44	1	239.0	95.5%	1	K.VNEEEVGGEALGR.L	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1635.1635.1	25.8339	0.24726	1274.8	1275.54	1	2.0	73.3%	1	R.LLVVYPWTQR.F	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1628.1628.2	57.1629	0.55701	1275.99	1275.54	1	242.0	83.3%	2	R.LLVVYPWTQR.F	2 2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1784.1784.3	64.0885	0.514006	1999.88	2001.23	1	254.0	65.0%	1	R.FFDSFGDLSNPGAVMGNPK.V	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1803.1803.2	95.2304	0.668521	2001.19	2001.23	1	229.0	90.3%	1	R.FFDSFGDLSNPGAVMGNPK.V	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.962.962.3	55.5897	0.446567	1803.68	1803.03	1	94.0	71.2%	1	K.VLHSFGEGVHHLDNLK.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1180.1180.2	63.6088	0.699618	1427.79	1427.55	1	128.0	81.8%	1	K.DFTPELQASYQK.V	2

Similarities: std_gi|122572|sp|P02070|HBB_BOVIN(2:6)

std_UniRef100_P00921

52.9%

259

28983

6.9

Carbonic anhydrase II [Bos taurus]

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.883.883.2	49.8003	0.294768	1019.39	1019.1	1	107.0	82.4%	1	K.DFPIANGER.Q	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.638.638.2	43.5398	0.404729	1004.99	1003.1	1	118.0	88.2%	1	R.QSPVDIDTK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1805.1805.2	73.9085	0.674228	2199.79	2199.56	1	146.0	75.0%	1	K.AVVQDPALKPLALVYGEATSR.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1822.1822.3	64.2742	0.47203	2201.48	2199.56	1	220.0	76.2%	2	K.AVVQDPALKPLALVYGEATSR.R	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.844.844.3	46.8075	0.435457	2257.28	2256.37	1	188.0	59.7%	1	R.RMVNNGHSFNVEYDDSQDK.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.944.944.2	57.75	0.565031	1391.39	1391.61	1	200.0	82.6%	1	K.AVLKDGPLTGTYR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.947.947.3	44.319	0.42038	1392.38	1391.61	1	69.0	69.0%	1	K.AVLKDGPLTGTYR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.769.769.2	37.746	0.418413	980.392	980.066	1	193.0	76.5%	1	K.DGPLTGTYR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1195.1195.2	53.3295	0.525589	1582.19	1582.8	1	230.0	80.0%	1	K.YAAELHLVHWNTK.Y	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1198.1198.3	45.2201	0.463009	1584.08	1582.8	1	102.0	81.8%	1	K.YAAELHLVHWNTK.Y	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2127.2127.2	85.6451	0.730884	2254.19	2254.55	1	172.0	88.6%	1	K.YGDFGTAAQQPDGLAVVGVFLK.V	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2128.2128.3	76.0247	0.624443	2254.28	2254.55	1	239.0	70.0%	2	K.YGDFGTAAQQPDGLAVVGVFLK.V	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.488.488.1	27.1137	0.278329	1012.5	1013.14	1	226.0	66.7%	1	K.VGDANPALQK.V	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1248.1248.1	41.5332	0.360848	973.5	974.143	1	208.0	85.7%	1	K.VLDALDSIK.T	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1249.1249.2	60.5665	0.505066	973.992	974.143	1	185.0	88.2%	1	K.VLDALDSIK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1072.1072.2	42.8577	0.417038	1347.79	1347.58	1	157.0	68.2%	1	K.EPISVSSQQMLK.F	2

std_sp|Q29443|TRFE_BOVIN

52.7%

685

75830

6.9

Serotransferrin precursor (Transferrin) (Siderophilin) (Beta-1-metal binding globulin) - Bos taurus (Bovine). clipped MRPAVRALLACAVLGLCLA

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.927.927.3	44.0489	0.363622	1380.38	1379.56	1	234.0	66.7%	1	K.KDTDFKLNELR.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1129.1129.2	57.0507	0.472682	1251.39	1251.38	1	184.0	88.9%	1	K.DTDFKLNELR.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1073.1073.3	61.6101	0.417039	1716.08	1716.93	1	250.0	70.2%	1	K.LYKELPDPQESIQR.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1078.1078.2	60.4165	0.496548	1717.39	1716.93	1	175.0	73.1%	1	K.LYKELPDPQESIQR.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.983.983.1	30.2589	0.337913	1311.6	1312.42	1	201.0	70.6%	1	K.ELPDPQESIQR.A	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.997.997.2	53.6547	0.502062	1312.39	1312.42	1	77.0	80.0%	2	K.ELPDPQESIQR.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.683.683.2	37.1452	0.24489	837.592	836.066	1	107.0	73.3%	1	K.LCQLCAGK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1262.1262.3	46.7298	0.353771	1642.58	1641.74	1	244.0	70.8%	1	K.HSTVFDNLPNPEDR.K	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1077.1077.3	68.1813	0.546275	1770.38	1769.91	1	245.0	81.2%	1	K.HSTVFDNLPNPEDRK.N	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.858.858.2	70.3652	0.59609	1426.79	1426.59	1	251.0	95.0%	1	R.KNYELLCGDNTR.K	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1638.1638.3	59.0715	0.495763	2354.48	2354.67	1	143.0	60.9%	2	K.SVDDYQECYLAMVPSHAVVAR.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1919.1919.3	66.4461	0.573304	2508.38	2508.8	1	55.0	70.3%	1	R.TVGGKEDVIWELLNHAQEHFGK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2088.2088.3	53.095	0.473218	2067.38	2066.28	1	172.0	68.5%	1	K.EDVIWELLNHAQEHFGK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1053.1053.2	60.2319	0.625571	1758.19	1758.93	1	62.0	81.8%	1	K.DKPDNFQLFQSPHGK.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1048.1048.3	57.2146	0.34897	1761.38	1758.93	1	219.0	74.5%	1	K.DKPDNFQLFQSPHGK.D	3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1109.1109.1	29.6607	0.0290973	635.6	635.781	1	248.0	87.5%	2	K.DLLFK.D	1 1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1660.1660.2	54.3601	0.494793	1469.79	1469.68	1	228.0	75.0%	1	K.DLLFKDSADGFLK.I	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1215.1215.2	55.1215	0.545522	1278.39	1278.45	1	240.0	81.8%	1	K.DSADGFLKIPSK.M	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1207.1207.3	37.2377	0.333526	1279.28	1278.45	1	212.0	63.2%	1	K.DSADGFLKIPSK.M	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2383.2383.3	52.1202	0.471123	2764.88	2765.2	1	245.0	62.1%	1	K.IPSKMDFELYLGYEYVTALQNLR.E	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2525.2525.2	71.3051	0.63436	2338.99	2339.67	1	233.0	78.6%	1	K.MDFELYLGYEYVTALQNLR.E	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2507.2507.3	77.4564	0.551068	2339.78	2339.67	1	124.0	74.1%	1	K.MDFELYLGYEYVTALQNLR.E	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.477.477.2	49.6126	0.490396	1679.99	1680.9	1	34.0	64.0%	1	R.ESKPPDSSKDECMVK.W	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.487.487.3	41.5709	0.330142	1680.38	1680.9	1	105.0	68.8%	1	R.ESKPPDSSKDECMVK.W	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.585.585.1	34.9584	0.476212	1099.5	1100.25	1	97.0	85.7%	1	K.WCAIGHQER.T	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.578.578.2	51.9936	0.368137	1100.39	1100.25	1	167.0	83.3%	1	K.WCAIGHQER.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1687.1687.2	96.4143	0.746832	2432.79	2433.63	1	166.0	90.6%	3	R.WSGFSGGAIECETAENTEECIAK.I	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1684.1684.3	73.9586	0.522016	2433.68	2433.63	1	201.0	77.5%	1	R.WSGFSGGAIECETAENTEECIAK.I	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1485.1485.1	33.0475	0.339273	1305.7	1306.57	1	153.0	77.8%	1	K.CGLVPVLAENYK.T	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1475.1475.2	64.9403	0.600363	1306.39	1306.57	1	177.0	81.0%	1	K.CGLVPVLAENYK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1190.1190.1	32.1968	0.408555	1389.6	1390.5	1	135.0	70.6%	1	K.TSDANINWNNLK.D	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1187.1187.2	68.75	0.560075	1391.59	1390.5	1	187.0	94.7%	1	K.TSDANINWNNLK.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1942.1942.1	47.5464	0.569393	1550.7	1551.85	1	179.0	76.2%	1	R.TAGWNIPMGLLYSK.I	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1938.1938.2	63.7248	0.55247	1552.79	1551.85	1	166.0	84.0%	2	R.TAGWNIPMGLLYSK.I	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1555.1555.3	49.6839	0.391402	2163.68	2161.43	1	248.0	63.9%	1	K.INNCKFDEFFSAGCAPGSPR.N	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1439.1439.2	82.8915	0.67798	1588.59	1588.74	1	245.0	89.3%	1	K.FDEFFSAGCAPGSPR.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1054.1054.2	44.9926	0.537744	1097.99	1098.2	1	150.0	77.8%	1	R.YYGYTGAFR.C	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1355.1355.2	38.033	0.444321	2738.59	2735.93	1	0.0	59.3%	1	K.GDVAFVKDQTVIQNTDGNNNEAWAK.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1027.1027.2	87.2735	0.670204	2018.59	2019.09	1	158.0	93.1%	1	K.DQTVIQNTDGNNNEAWAK.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.945.945.3	44.9661	0.41103	1466.78	1465.76	1	153.0	71.8%	1	K.NLKKENFEVLCK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.612.612.3	66.7535	0.548003	1885.28	1884.08	1	117.0	71.7%	1	K.DGTRKPVTDAENCHLAR.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.538.538.2	77.6558	0.637835	1454.39	1454.65	1	194.0	100.0%	1	R.KPVTDAENCHLAR.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.534.534.3	73.0208	0.587732	1454.78	1454.65	1	247.0	83.7%	1	R.KPVTDAENCHLAR.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.568.568.2	67.0315	0.669711	1306.59	1306.46	1	125.0	94.4%	1	K.ILNKQQDDFGK.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.569.569.3	40.1356	0.267454	1307.18	1306.46	1	209.0	65.7%	1	K.ILNKQQDDFGK.S	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1614.1614.2	85.3204	0.710989	1881.59	1882.08	1	254.0	96.3%	1	K.SVTDCTSNFCLFQSNSK.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1225.1225.2	66.4197	0.700925	1468.19	1467.53	1	200.0	90.0%	1	K.TYDSYLGDDYVR.A	2

Similarities: std_sp|P02789|TRFE_CHICK(1:46)

std_gi|1168350|sp|P00330|ADH1_YEAST

50.7%

347

36692

6.7

ALCOHOL DEHYDROGENASE I gi|3339 (V01292) alcohol dehydrogenase [Saccharomyces cerevisiae] gi|171025 (M38456) alcohol dehydrogenase [Saccharomyces cerevisiae] gi|171027 (J01313) alcohol dehydrogenase 1 [Saccharomyces cerevisiae] [MASS=36823]

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.717.717.1	35.2057	0.428288	1136.6	1137.28	1	224.0	73.3%	1	K.GVIFYESHGK.L	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.719.719.2	44.6558	0.286711	1139.79	1137.28	1	204.0	76.5%	1	K.GVIFYESHGK.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.630.630.1	28.8324	0.388626	893.5	894.102	1	225.0	83.3%	1	K.DIPVPKPK.A	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1117.1117.1	39.5238	0.336983	1013.6	1014.21	1	129.0	85.7%	1	K.ANELLINVK.Y	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1119.1119.2	52.9246	0.460568	1014.99	1014.21	1	252.0	82.4%	1	K.ANELLINVK.Y	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1424.1424.2	76.7157	0.642532	2019.79	2020.36	1	254.0	80.6%	1	K.LPLVGGHEGAGVVVGMGENVK.G	2 2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.762.762.2	43.7771	0.367726	836.992	836.964	1	203.0	80.0%	1	K.IGDYAGIK.W	2 2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1378.1378.2	53.688	0.559648	1620.79	1619.82	1	26.0	70.4%	1	R.VLGIDGGEGKEELFR.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1393.1393.3	46.9078	0.456933	1621.88	1619.82	1	119.0	58.5%	1	R.VLGIDGGEGKEELFR.S	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1714.1714.2	66.4831	0.628312	1313.39	1313.49	1	180.0	86.4%	1	R.SIGGEVFIDFTK.E	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.989.989.1	36.42	0.304361	1071.6	1072.29	1	172.0	68.8%	1	K.EKDIVGAVLK.A	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1258.1258.1	34.9241	0.312484	814.5	815.001	1	210.0	78.6%	1	K.DIVGAVLK.A	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1265.1265.2	45.0924	0.385004	816.392	815.001	1	204.0	92.9%	1	K.DIVGAVLK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1480.1480.2	99.1394	0.744089	2312.79	2313.49	1	232.0	86.1%	1	K.ATDGGAHGVINVSVSEAAIEASTR.Y	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1487.1487.3	51.2905	0.483649	2314.58	2313.49	1	198.0	63.5%	1	K.ATDGGAHGVINVSVSEAAIEASTR.Y	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1068.1068.2	57.3629	0.645094	1387.59	1387.64	1	244.0	76.0%	1	R.ANGTTVLVGMPAGAK.C	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1284.1284.2	59.1411	0.60714	1242.99	1242.46	1	180.0	85.0%	1	K.CCSDVFNQVVK.S	2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1213.1213.1	28.3588	0.414693	1251.7	1252.41	1	64.0	70.6%	1	K.SISIVGSYVGNR.A	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1209.1209.2	66.7304	0.624611	1252.59	1252.41	1	207.0	82.6%	1	K.SISIVGSYVGNR.A	2 2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1468.1468.1	30.9154	0.256695	968.5	969.085	1	168.0	83.3%	1	R.EALDFFAR.G	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1482.1482.2	39.7949	0.426166	969.992	969.085	1	172.0	80.0%	1	R.EALDFFAR.G	2 2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1579.1579.1	36.4513	0.530865	1447.8	1448.7	1	166.0	75.0%	1	K.VVGLSTLPEIYEK.M	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1572.1572.2	64.0311	0.563136	1448.79	1448.7	1	214.0	82.6%	2	K.VVGLSTLPEIYEK.M	2

Similarities: std_gi|113380|sp|P00331|ADH2_YEAST(6:17)

std_UniRef100_P00692

50.5%

483

54838

5.6

Alpha-amylase precursor [Bacillus amyloliquefaciens] clipped MIQKRKRTVSFRLVLMCTLLFVSLPITKTSA

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2010.2010.3	50.9651	0.521435	2615.78	2615.89	1	203.0	67.2%	1	-.VNGTLMQYFEWYTPNDGQHWK.R	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1872.1872.3	44.0762	0.373966	2552.78	2552.89	1	243.0	51.4%	1	R.LQNDAEHLSDIGITAVWIPPAYK.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1819.1819.2	70.3196	0.691022	2594.79	2595.74	1	175.0	79.3%	1	K.GLSQSDNGYGPYDLYDLGEFQQK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1272.1272.3	49.3385	0.375933	1413.68	1413.53	1	245.0	73.2%	1	K.SELQDAIGSLHSR.N	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1113.1113.2	80.7169	0.592842	1900.59	1901.0	1	238.0	81.2%	1	K.AGADATEDVTAVEVNPANR.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.627.627.2	58.1971	0.559772	1369.39	1369.43	1	226.0	83.3%	1	R.NQETSEEYQIK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2164.2164.2	84.9933	0.62364	1827.59	1828.04	1	242.0	85.2%	1	K.WGIWYANELSLDGFR.I	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1669.1669.2	62.989	0.656049	1788.79	1788.98	1	184.0	77.8%	1	K.EMFTVAEYWQNNAGK.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2093.2093.3	47.1547	0.337012	2662.88	2663.97	1	229.0	63.6%	1	K.EMFTVAEYWQNNAGKLENYLNK.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1992.1992.3	59.1628	0.616209	3176.18	3175.47	1	189.0	71.6%	1	K.TSFNQSVFDVPLHFNLQAASSQGGGYDMR.R	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.904.904.2	56.389	0.502367	960.392	960.119	1	170.0	88.2%	1	R.LLDGTVVSR.H	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1502.1502.2	63.1259	0.661217	1843.39	1843.02	1	197.0	73.1%	1	R.ESGYPQVFYGDMYGTK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1498.1498.2	66.6568	0.581279	1609.79	1609.9	1	22.0	76.9%	1	K.EIPSLKDNIEPILK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1497.1497.3	45.9265	0.352344	1611.08	1609.9	1	90.0	75.6%	1	K.EIPSLKDNIEPILK.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1409.1409.2	63.5213	0.53632	1344.99	1344.51	1	221.0	77.8%	1	K.SGLAALITDGPGGSK.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1222.1222.3	50.8581	0.433139	1501.58	1500.7	1	230.0	63.6%	1	K.SGLAALITDGPGGSKR.M	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1354.1354.2	65.3372	0.66856	1497.39	1497.56	1	248.0	82.6%	1	K.NAGETWYDITGNR.S	2

std_sp|P02789|TRFE_CHICK

50.1%

686

75828

7.0

Ovotransferrin precursor (Conalbumin) (Allergen Gal d 3) (Gal d III) (Serum transferrin) - Gallus gallus (Chicken). clipped MKLILCTVLSLGIAAVCFA

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.950.950.1	32.59	0.285291	1179.5	1180.32	1	232.0	68.8%	1	R.WCTISSPEEK.K	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.948.948.2	44.4516	0.292024	1180.59	1180.32	1	210.0	63.2%	1	R.WCTISSPEEK.K	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.909.909.2	44.7518	0.412402	892.392	892.107	1	184.0	86.7%	1	R.ISLTCVQK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1133.1133.1	35.6597	0.450677	926.5	927.109	1	141.0	91.7%	1	K.ATYLDCIK.A	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1138.1138.2	44.6043	0.497308	927.392	927.109	1	153.0	86.7%	1	K.ATYLDCIK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.937.937.2	79.8738	0.689085	1437.59	1437.59	1	246.0	100.0%	1	K.KGTEFTVNDLQGK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.938.938.3	41.0489	0.415659	1438.58	1437.59	1	158.0	58.5%	1	K.KGTEFTVNDLQGK.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1097.1097.2	67.9888	0.627381	1309.99	1309.42	1	244.0	85.7%	1	K.GTEFTVNDLQGK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1708.1708.2	56.4902	0.602229	1535.39	1535.79	1	139.0	86.4%	1	R.SAGWNIPIGTLLHR.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1707.1707.3	51.2542	0.470182	1535.78	1535.79	1	236.0	77.8%	1	R.SAGWNIPIGTLLHR.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1612.1612.2	104.688	0.675544	1961.39	1961.14	1	230.0	100.0%	4	R.GAIEWEGIESGSVEQAVAK.F	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1593.1593.3	90.4844	0.653242	1961.78	1961.14	1	254.0	80.0%	1	R.GAIEWEGIESGSVEQAVAK.F	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1379.1379.3	69.7045	0.502049	2748.38	2748.94	1	159.0	75.4%	1	K.HTTVNENAPDQKDEYELLCLDGSR.Q	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2083.2083.2	56.4738	0.579857	1696.99	1696.85	1	204.0	75.0%	1	R.DDNKVEDIWSFLSK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1998.1998.1	37.3902	0.514099	1223.7	1224.4	1	232.0	75.0%	1	K.VEDIWSFLSK.A	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1997.1997.2	62.8772	0.611969	1224.19	1224.4	1	205.0	88.9%	1	K.VEDIWSFLSK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.640.640.1	41.5894	0.537174	1067.5	1068.13	1	232.0	86.7%	1	K.AQSDFGVDTK.S	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.633.633.2	52.6917	0.535602	1068.59	1068.13	1	146.0	93.8%	3	K.AQSDFGVDTK.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1224.1224.2	47.3851	0.478628	1202.39	1202.35	1	218.0	65.0%	1	K.SDFHLFGPPGK.K	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1228.1228.3	53.341	0.53276	1202.78	1202.35	1	252.0	75.8%	1	K.SDFHLFGPPGK.K	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1147.1147.2	47.1547	0.564297	1882.99	1883.2	1	141.0	68.0%	1	K.SDFHLFGPPGKKDPVLK.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1154.1154.3	62.3387	0.472969	1885.58	1883.2	1	245.0	64.9%	1	K.SDFHLFGPPGKKDPVLK.D	3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1109.1109.1	29.6607	0.0290973	635.6	635.781	1	248.0	87.5%	4	K.DLLFK.D	1 1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2262.2262.3	45.9014	0.509772	2858.18	2856.29	1	206.0	58.2%	2	K.RVPSLMDSQLYLGFEYYSAIQSMR.K	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.518.518.2	35.6449	0.166509	914.192	914.007	1	228.0	66.7%	1	K.DQLTPSPR.E	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.870.870.2	54.7493	0.46581	1278.59	1277.49	1	88.0	94.4%	1	R.IQWCAVGKDEK.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1870.1870.3	50.5994	0.273707	2539.88	2540.87	1	172.0	72.1%	3	R.WSVVSNGDVECTVVDETKDCIIK.I	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.800.800.3	40.6997	0.149544	1332.38	1332.46	1	79.0	68.6%	1	R.KDSNVNWNNLK.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1059.1059.2	39.5211	0.345331	1202.99	1204.29	1	64.0	77.8%	1	K.DSNVNWNNLK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1552.1552.2	73.4533	0.677654	2437.99	2437.59	1	234.0	81.2%	2	R.TGTCNFDEYFSEGCAPGSPPNSR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1560.1560.3	59.6148	0.46225	2438.78	2437.59	1	234.0	64.3%	1	R.TGTCNFDEYFSEGCAPGSPPNSR.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1157.1157.2	43.503	0.551712	1048.39	1048.19	1	154.0	72.2%	1	K.YFGYTGALR.C	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1902.1902.2	79.7778	0.671627	1770.59	1770.98	1	252.0	88.5%	1	K.NLQMDDFELLCTDGR.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.739.739.2	42.7188	0.332279	869.792	868.989	1	238.0	84.6%	1	R.ANVMDYR.E	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1092.1092.2	66.2549	0.584841	1991.79	1992.31	1	132.0	75.9%	1	R.ECNLAEVPTHAVVVRPEK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1089.1089.3	42.7532	0.457915	1992.38	1992.31	1	232.0	66.7%	1	R.ECNLAEVPTHAVVVRPEK.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.752.752.2	46.2841	0.0249828	915.392	915.081	1	250.0	90.9%	1	K.IRDLLER.Q	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1169.1169.2	52.0042	0.609714	1162.99	1162.37	1	212.0	87.5%	1	K.FMMFESQNK.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1704.1704.2	77.1035	0.577269	1778.59	1779.13	1	188.0	84.6%	1	K.FMMFESQNKDLLFK.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1703.1703.3	52.5116	0.45808	1779.08	1779.13	1	230.0	74.4%	1	K.FMMFESQNKDLLFK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2023.2023.3	55.7886	0.497451	1748.48	1748.03	1	125.0	72.0%	1	K.EFLGDKFYTVISSLK.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1383.1383.2	47.3878	0.52499	1058.19	1058.26	1	121.0	76.5%	1	K.FYTVISSLK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2313.2313.2	54.5407	0.227869	1886.39	1887.21	1	177.0	66.7%	1	K.TCNPSDILQMCSFLEGK.-	2

Similarities: std_sp|Q29443|TRFE_BOVIN(1:42)

std_sp|P02754|LACB_BOVIN|ORNL

50.0%

162

18367

4.9

Beta-lactoglobulin precursor (Beta-LG) (Allergen Bos d 5) - Bos taurus (Bovine). clipped MKCLLLALALTCGAQA

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.774.774.2	41.8613	0.536068	933.992	934.188	1	177.0	80.0%	1	-.LIVTQTMK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1847.1847.2	80.1284	0.612397	2314.19	2314.68	1	152.0	90.0%	1	R.VYVEELKPTPEGDLEILLQK.W	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1844.1844.3	76.202	0.576831	2316.08	2314.68	1	122.0	71.4%	1	R.VYVEELKPTPEGDLEILLQK.W	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.857.857.1	34.8797	0.272665	903.6	904.141	1	242.0	84.6%	1	K.TKIPAVFK.I	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.867.867.2	42.0487	0.315808	903.992	904.141	1	212.0	80.0%	1	K.TKIPAVFK.I	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.915.915.1	40.6988	0.443345	1193.7	1194.41	1	153.0	80.0%	1	K.VLVLDTDYKK.Y	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.922.922.2	55.2031	0.55516	1194.79	1194.41	1	236.0	88.9%	1	K.VLVLDTDYKK.Y	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.829.829.1	52.4527	0.58695	1245.6	1246.31	1	77.0	93.8%	1	R.TPEVDDEALEK.F	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.827.827.2	73.9442	0.613893	1246.19	1246.31	1	209.0	90.0%	2	R.TPEVDDEALEK.F	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1217.1217.2	77.6268	0.532557	1637.59	1636.75	1	216.0	92.0%	1	R.TPEVDDEALEKFDK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.708.708.2	34.218	0.280114	838.192	838.064	1	112.0	76.9%	1	K.ALPMHIR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1873.1873.1	50.2123	0.500561	1658.8	1659.86	1	196.0	81.0%	1	R.LSFNPTQLEEQCHI.-	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1887.1887.2	63.0336	0.48197	1661.19	1659.86	1	176.0	87.0%	3	R.LSFNPTQLEEQCHI.-	2

contaminant_sp|P02248|UBIQ_HUMAN

50.0%

8565

7.2

Ubiquitin - Homo sapiens (Human), Mus musculus (Mouse), Rattus norvegicus (Rat), Bos taurus (Bovine), Cavia porcellus (Guinea pig), Cricetulus griseus (Chinese hamster), Cricetulus longicaudatus (Long-tailed hamster) (Chinese hamster

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1472.1472.2	73.1003	0.683578	1789.59	1788.99	1	164.0	96.0%	1	K.TITLEVEPSDTIENVK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.485.485.2	63.3114	0.603928	1524.39	1524.67	1	213.0	79.2%	1	K.IQDKEGIPPDQQR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.788.788.1	38.3273	0.547644	1081.5	1082.2	1	156.0	84.6%	1	R.TLSDYNIQK.E	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.787.787.2	53.3966	0.531572	1082.19	1082.2	1	147.0	87.5%	1	R.TLSDYNIQK.E	2

std_sp|P00698|LYC_CHICK

48.8%

129

14313

9.0

Lysozyme C precursor (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase C) (Allergen Gal d 4) (Gal d IV) - Gallus gallus (Chicken).

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.792.792.2	65.5233	0.592132	1428.99	1429.49	1	251.0	86.4%	1	K.FESNFNTQATNR.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1350.1350.2	79.1127	0.691799	1754.19	1754.85	1	247.0	81.5%	1	R.NTDGSTDYGILQINSR.W	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2102.2102.2	106.079	0.727532	2337.39	2338.73	1	173.0	93.9%	2	R.NLCNIPCSALLSSDITASVNCAK.K	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2084.2084.3	70.2896	0.549191	2339.18	2338.73	1	186.0	69.9%	2	R.NLCNIPCSALLSSDITASVNCAK.K	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1953.1953.3	41.2253	0.331375	2468.18	2466.91	1	91.0	50.7%	1	R.NLCNIPCSALLSSDITASVNCAKK.I	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1063.1063.3	57.0367	0.402292	1277.48	1277.49	1	254.0	78.8%	1	R.CKGTDVQAWIR.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1062.1062.2	66.1811	0.518431	1277.99	1277.49	1	190.0	85.0%	1	R.CKGTDVQAWIR.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1182.1182.2	55.1249	0.432906	1046.19	1046.17	1	211.0	82.4%	1	K.GTDVQAWIR.G	2

contaminant_P00442

45.7%

151

15551

6.3

Superoxide dismutase [Cu-Zn] [Bos taurus]

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1299.1299.3	69.3534	0.642339	2070.38	2070.42	1	219.0	72.9%	1	K.AVCVLKGDGPVQGTIHFEAK.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.628.628.2	74.2971	0.592034	1225.99	1226.33	1	186.0	95.0%	1	R.HVGDLGNVTADK.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2402.2402.3	63.7315	0.642268	3709.28	3709.19	1	157.0	71.6%	1	R.HVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGR.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2557.2557.2	88.5753	0.672384	2501.19	2501.88	1	226.0	90.0%	1	K.NGVAIVDIVDPLISLSGEYSIIGR.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2575.2575.3	47.8928	0.511707	2502.08	2501.88	1	175.0	61.4%	1	K.NGVAIVDIVDPLISLSGEYSIIGR.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.619.619.2	71.2091	0.527627	1497.59	1497.72	1	103.0	95.2%	1	R.TMVVHEKPDDLGR.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.622.622.3	57.9578	0.488866	1498.28	1497.72	1	186.0	75.0%	1	R.TMVVHEKPDDLGR.G	3

std_sp|P61823|RNP_BOVIN

45.2%

124

13690

8.3

Ribonuclease pancreatic precursor (EC 3.1.27.5) (RNase 1) (RNase A) - Bos taurus (Bovine). clipped MALKSLVLLSLLVLVLLLVRVQPSLG

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.953.953.2	59.8976	0.635808	2308.39	2309.54	1	48.0	71.9%	1	R.QHMDSSTSAASSSNYCNQMMK.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.952.952.3	46.0604	0.48614	2309.48	2309.54	1	216.0	62.3%	1	R.QHMDSSTSAASSSNYCNQMMK.S	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1793.1793.2	51.6782	0.592982	2404.79	2404.77	1	204.0	67.7%	1	R.CKPVNTFVHESLADVQAVCSQK.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1788.1788.3	60.5046	0.507897	2404.88	2404.77	1	79.0	66.7%	1	R.CKPVNTFVHESLADVQAVCSQK.N	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.555.555.1	50.9941	0.622648	1447.7	1448.6	1	166.0	84.2%	1	R.ETGSSKYPNCAYK.T	1
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.547.547.2	49.3722	0.565936	1448.39	1448.6	1	96.0	72.7%	1	R.ETGSSKYPNCAYK.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.592.592.2	39.2607	0.270556	858.992	858.992	1	192.0	78.6%	1	K.YPNCAYK.T	2

std_sp|P01267|THYG_BOVIN

21.8%

2750

301219

5.7

Thyroglobulin precursor - Bos taurus (Bovine). clipped MALALWVFGLLDLICLASA

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.967.967.3	49.4153	0.430827	1819.88	1818.09	1	69.0	68.5%	1	R.SPPQCSPDGAFRPVQCK.L	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.573.573.3	56.223	0.544443	1977.08	1977.1	1	254.0	69.1%	1	R.QRGEPPSCAEDQSCPSER.R	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1074.1074.2	55.1915	0.537304	1653.59	1652.89	1	4.0	76.9%	1	R.RSLLLAPEEGPVSQR.F	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1282.1282.2	65.3552	0.61173	1496.79	1496.7	1	176.0	90.9%	1	R.SLLLAPEEGPVSQR.F	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2362.2362.3	48.7617	0.444951	2883.68	2884.39	1	237.0	63.0%	1	R.FTASCPPSIKELFLDSGIFQPMLQGR.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2137.2137.2	73.5591	0.62828	1851.39	1852.16	1	233.0	85.7%	1	K.ELFLDSGIFQPMLQGR.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2140.2140.3	64.4483	0.551785	1851.98	1852.16	1	198.0	66.7%	1	K.ELFLDSGIFQPMLQGR.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.834.834.2	55.6505	0.564586	1190.39	1189.36	1	21.0	84.2%	1	K.RLQQNLFGGR.F	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1582.1582.3	62.9221	0.550488	2265.68	2264.59	1	235.0	63.0%	1	R.ALADLAKPLSVGLNSNPASEAPK.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1722.1722.2	89.8019	0.730956	2209.59	2210.58	1	177.0	88.9%	1	R.MQSLLGSQPAGSSLFVPACTSK.G	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1724.1724.3	60.1728	0.575999	2212.28	2210.58	1	175.0	62.5%	1	R.MQSLLGSQPAGSSLFVPACTSK.G	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.660.660.2	52.3765	0.458399	1360.39	1360.6	1	196.0	75.0%	1	K.KCPSPCQLQAER.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.653.653.3	51.263	0.229195	1361.18	1360.6	1	254.0	74.3%	1	K.KCPSPCQLQAER.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1735.1735.2	80.9046	0.620232	2059.59	2059.35	1	241.0	87.9%	1	R.WEAQNSAGQALTPAELLMK.I	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2154.2154.3	76.7098	0.592341	2236.58	2236.58	1	250.0	82.0%	1	R.LFIQNLYEAGQQGIFPGLAR.Y	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1843.1843.2	62.8206	0.542776	2054.19	2054.27	1	164.0	70.0%	1	R.YPGPYSDFSAPLAHFDLR.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1834.1834.3	57.297	0.51737	2056.28	2054.27	1	115.0	70.7%	1	R.YPGPYSDFSAPLAHFDLR.S	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.830.830.2	59.8016	0.616925	1801.59	1802.04	1	154.0	81.5%	1	R.NEPNKVPACPGSCEEVK.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1597.1597.2	64.2945	0.542728	1672.19	1672.88	1	202.0	77.8%	3	R.LTDEELAFPPLSPSR.E	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1104.1104.2	59.5417	0.532926	1129.99	1129.26	1	148.0	89.5%	1	K.FLSGSDYAIR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2029.2029.2	85.7805	0.631634	1713.59	1712.96	1	152.0	96.0%	1	K.DLFIPTCLETGEFAR.L	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.509.509.2	35.3762	0.473383	1038.99	1039.16	1	30.0	57.9%	1	R.TSPGYSPACR.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2189.2189.3	52.0801	0.564653	3074.78	3074.53	1	122.0	58.8%	1	R.VAGSQPACESPQCPLPFSVADVAGGAILCER.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.463.463.3	41.2088	0.26267	1309.88	1309.47	1	229.0	65.7%	1	R.RWESRPPQPR.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2224.2224.3	46.2308	0.484816	2945.78	2945.46	1	82.0	62.9%	1	R.ACQRPQFWQTLQTQAQFQLLLPLGK.V	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1257.1257.2	53.2017	0.53928	1676.39	1676.89	1	196.0	73.3%	1	K.TAGTPVSIPVCDDSSVK.V	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2332.2332.3	88.9305	0.632607	2490.68	2490.81	1	92.0	74.6%	3	K.LQLVDAPPASLPDLQDVEEALAGK.Y	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2307.2307.2	74.259	0.632973	2490.79	2490.81	1	163.0	81.2%	2	K.LQLVDAPPASLPDLQDVEEALAGK.Y	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.785.785.2	50.4265	0.539622	998.792	998.081	1	139.0	88.2%	1	K.TFSADTSIR.F	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1477.1477.2	61.2196	0.609916	1215.59	1215.37	1	187.0	76.2%	1	R.TQFGCLEGFGR.V	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1122.1122.2	93.4731	0.71924	1535.79	1534.73	1	238.0	96.3%	1	R.VVAASDASQDALGCVK.C	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.720.720.2	49.2547	0.508743	954.392	954.051	1	246.0	82.4%	1	K.AFCVDGEGR.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1980.1980.2	64.2036	0.543248	2298.79	2299.72	1	171.0	74.2%	1	R.RLPWTEAEAPLVDAQCLVMR.K	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1978.1978.3	71.5854	0.474935	2301.08	2299.72	1	222.0	75.0%	1	R.RLPWTEAEAPLVDAQCLVMR.K	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2177.2177.2	81.0235	0.663968	2525.99	2526.85	1	96.0	89.7%	1	R.GLTPLEGTQDTLTSFQQVYLWK.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2172.2172.3	71.8491	0.624663	2526.68	2526.85	1	148.0	72.3%	2	R.GLTPLEGTQDTLTSFQQVYLWK.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1653.1653.3	69.2598	0.593585	2742.68	2743.18	1	155.0	64.6%	2	R.KPNIPLPGFGTSSPSVPIATHGQLLGR.S	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1467.1467.3	39.0147	0.358842	1898.18	1896.26	1	211.0	44.1%	1	R.AVLMGGSALSPAAVIRPER.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1960.1960.2	73.726	0.682207	2375.39	2375.74	1	243.0	76.7%	1	K.LLAVSGPFHYWGPVVDGQYLR.E	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1972.1972.3	73.2454	0.661324	2375.78	2375.74	1	198.0	67.6%	1	K.LLAVSGPFHYWGPVVDGQYLR.E	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1540.1540.3	56.1004	0.46265	1944.98	1943.21	1	157.0	63.2%	1	R.VKVDLLIGSSQDDGLINR.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1568.1568.2	75.066	0.693938	1715.79	1715.9	1	129.0	82.8%	1	K.VDLLIGSSQDDGLINR.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2339.2339.2	74.7953	0.645439	2038.39	2038.4	1	201.0	85.7%	1	R.DYFIICPVIDMASHWAR.T	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.2338.2338.3	38.6334	0.278516	2038.58	2038.4	1	215.0	44.4%	1	R.DYFIICPVIDMASHWAR.T	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.659.659.2	46.6135	0.462454	1404.79	1405.47	1	136.0	71.4%	1	R.SGNPNYPHEFSR.R	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1733.1733.2	75.2754	0.588421	1756.39	1757.0	1	162.0	85.2%	1	R.RAPEFAAPWPDFVPR.D	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1729.1729.3	55.0599	0.514824	1757.48	1757.0	1	238.0	72.7%	1	R.RAPEFAAPWPDFVPR.D	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1259.1259.2	36.9078	0.401233	1041.79	1041.24	1	226.0	64.7%	1	K.ELSVLLPNR.Q	2

std_gi|113380|sp|P00331|ADH2_YEAST

20.2%

347

36601

6.7

ALCOHOL DEHYDROGENASE II gi|65897|pir||DEBYA2 alcohol dehydrogenase (EC 1.1.1.1) II - yeast (Saccharomyces cerevisiae) gi|171021 (J01314) alcohol dehydrogenase II [Saccharomyces cerevisiae] gi|600021 (V01293) alcohol dehydrogenase II [Saccharomyces cerevisiae] gi|798945 (Z49212) Adh2p [Saccharomyces cerevisiae] [MASS=36732]

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1454.1454.3	69.8278	0.559686	2421.38	2421.7	1	232.0	70.3%	1	K.YSGVCHTDLHAWHGDWPLPTK.L	3
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1424.1424.2	76.7157	0.642532	2019.79	2020.36	1	254.0	80.6%	1	K.LPLVGGHEGAGVVVGMGENVK.G	2 2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.762.762.2	43.7771	0.367726	836.992	836.964	1	203.0	80.0%	1	K.IGDYAGIK.W	2 2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1213.1213.1	28.3588	0.414693	1251.7	1252.41	1	64.0	70.6%	1	K.SISIVGSYVGNR.A	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1209.1209.2	66.7304	0.624611	1252.59	1252.41	1	207.0	82.6%	1	K.SISIVGSYVGNR.A	2 2
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1468.1468.1	30.9154	0.256695	968.5	969.085	1	168.0	83.3%	1	R.EALDFFAR.G	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1482.1482.2	39.7949	0.426166	969.992	969.085	1	172.0	80.0%	1	R.EALDFFAR.G	2 2

Similarities: std_gi|1168350|sp|P00330|ADH1_YEAST(6:1)

std_gi|122361|sp|P01966|HBA_BOVIN

16.3%

141

15053

8.4

HEMOGLOBIN ALPHA CHAIN gi|70238|pir||HABO hemoglobin alpha chain - bovine gi|576142|pdb|1HDA|A Bos taurus gi|576144|pdb|1HDA|C Bos taurus [MASS=15053]

Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1319.1319.2	68.1249	0.714931	1834.79	1835.03	1	59.0	80.8%	1	K.TYFPHFDLSHGSAQVK.G	2 2
ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1318.1318.3	64.0099	0.586516	1835.48	1835.03	1	208.0	76.5%	2	K.TYFPHFDLSHGSAQVK.G	3 3
ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.793.793.1	27.9018	0.180604	818.5	818.948	1	168.0	81.8%	1	R.VDPVNFK.L	1 1
ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.789.789.2	36.5584	0.220676	819.192	818.948	1	144.0	84.6%	1	R.VDPVNFK.L	2 2

Similarities: std_UniRef100_P01958(4:0)

std_sp|P00327|ADHE_HORSE

12.3%

374

39804

8.0

Alcohol dehydrogenase E chain (EC 1.1.1.1) - Equus caballus (Horse).

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1314.1314.2	56.5196	0.588654	1570.59	1570.83	1	90.0	76.9%	1	K.KPFSIEEVEVAPPK.A	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1313.1313.3	47.9226	0.521217	1572.08	1570.83	1	252.0	69.6%	1	K.KPFSIEEVEVAPPK.A	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1408.1408.2	44.7362	0.607448	1203.19	1203.49	1	98.0	70.0%	1	K.VIPLFTPQCGK.C	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1928.1928.3	70.3146	0.537831	1869.98	1869.26	1	191.0	76.0%	1	K.KFALDPLITHVLPFEK.I	3
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1513.1513.1	26.7465	0.456637	594.3	594.729	1	248.0	87.5%	1	R.TILTF.-	1

contaminant_gi|136429|sp|P00761|TRYP_PIG

11.7%

223

23504

7.9

Trypsin precursor

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.853.853.2	39.9694	0.391868	843.192	843.015	1	49.0	84.6%	1	R.VATVSLPR.S	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1532.1532.2	35.7217	0.29886	1799.19	1798.01	1	150.0	46.7%	1	R.SCAAAGTECLISGWGNTR.S	2

std_sp|P00639|DRN1_BOVIN

8.8%

260

29066

5.3

Deoxyribonuclease I precursor (EC 3.1.21.1) (DNase I) - Bos taurus (Bovine). clipped MRGTRLMGLLLALAGLLQLGLS

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1668.1668.2	63.5866	0.594698	2722.19	2722.97	1	146.0	77.8%	1	K.LLDYLNQDDPNTYHYVVSEPLGR.N	2
*	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1667.1667.3	62.9243	0.385981	2723.78	2722.97	1	188.0	68.2%	1	K.LLDYLNQDDPNTYHYVVSEPLGR.N	3

std_gi|122572|sp|P02070|HBB_BOVIN

6.9%

145

15954

7.6

HEMOGLOBIN BETA CHAIN gi|70412|pir||HBBOB hemoglobin beta chain - bovine gi|576143|pdb|1HDA|B Bos taurus gi|576145|pdb|1HDA|D Bos taurus gi|395 (X00376) beta-globin [Bos taurus] gi|162741 (M63453) beta-globin [Bos taurus] [MASS=15954]

	Filename	XCorr	DeltCN	ObsM+H+	CalcM+H+	SpR	SpScore	Ion%	#	Sequence
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1635.1635.1	25.8339	0.24726	1274.8	1275.54	1	2.0	73.3%	1	R.LLVVYPWTQR.F	1 1
	ExtPSM_Trypsin_1d_SW_5ug_Inj_072304_03_PPM.1628.1628.2	57.1629	0.55701	1275.99	1275.54	1	242.0	83.3%	2	R.LLVVYPWTQR.F	2 2

Similarities: std_UniRef100_P02062(2:0)

	Proteins	Peptide IDs	Copies
Unfiltered	1514	2596	2750
Redundant	24	434	517
Nonredundant	24	413	491

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