Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss303653	KWOK|OVLP-000621-332279		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	06/30/00	10/10/03	79	Genomic			97 %
ss485718	SC_JCM|AC010102.3_65321		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	07/12/00	10/10/03	80	Genomic			unknown
ss1270325	KWOK|OVLP-000804-220147		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	09/02/00	10/10/03	87	Genomic			94 %
ss1655483	KWOK|OVLP-000925-530404		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	10/05/00	10/25/06	87	Genomic			94 %
ss2927614	TSC-CSHL|TSC0929100		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	01/26/01	10/10/03	94	Genomic			unknown
ss8330780	SC_SNP|NT_011362.7_22598611		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	04/17/03	10/10/03	117	Genomic			unknown
ss23787515	PERLEGEN|afd4191126		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	08/10/04	09/13/04	123	Genomic			unknown
ss69246467	PERLEGEN|PGP04191126		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	01/30/07	08/14/07	127	Genomic			unknown
ss75035272	ILLUMINA|ILMN_Human_1M_rs235195		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	08/28/07	08/29/07	129	Genomic			unknown
ss83566403	HGSV|Cor18555_SNV_20070510.chr20_56979160		fwd/T	A/G	cagccattaaaaaaaaaagccaggagcgat	gctcacacttgggaggcagaggcaggataa	11/27/07	12/05/07	130	Genomic			unknown

Fasta sequence   (Legend)

 TGGGACCTCA TATGCATCAT GCCAGGAAGC ACGGCAGGAG GCCCTTCAGA TTGATGTTTG
 ACCATCCCTA CAATGAAGGC AAAAGCAGCC TTTCTCCAAT TTGAGCTTGA AAAATCCTCC
 ATGAGGACTC GTTAGGAAAA TATACATATA TATATATACA CATATGTGAC aaaaaattaa
 aacaaacaaa agtggaaaaa ttgtactttt aaaaaatgtt atgtactcat cactggattt
 caacaattat caacaaacgg gcaatcatgt ttcatctgta catccaccct ccactggatt
 attttaaagc aaatcccaaa tattctgtca cttcctctga aatacttctg acgtatcgta
 aggagtttta aaaacttaat cataatgcca atatcatgct aaaaaattag caaaaatgcc
 ttaataccat cagcatagtc aaccagtgtt cacatttcTC TAGCTGTCTT AAAAATTGAA
 AAACTGGAcc agagcaattg ggcaagagaa agaagtaaag gggatccaaa ttggaaggga
 agaagtcaag ttagccttgt tcacaaacaa catgatctta tacctaaaat aacccaaaga
 tttcaccaaa aaaccattag aactgataaa caaatttggt aaatttgcag gatacaaaat
 caacatccaa aagtcagtag cacttatata tgtcaatagc gaacaatctg ttaaaaaaaa
 tcaagaaagc aatcgcattt ataatagcta caaagaatat taaataccta ggaatcaatc
 taaccaaaga agtgaaaggt ctatacaagg aaaactataa aactccaatg aaaaaaatag
 aaaaggacat acaaaaaagt gaaaagatat tccatcctca tggattgaaa gaattaatag
 tattgaaatg acaatactat ccaaagcaat ttacagattc aatgcaatcg ctatcagaaa
 taccaatgac attcacagaa atagaaaaaa aaatcctaaa atttatatag aaccacaaaa
 gactctgtat tgccaaagca atcctaagca aaaagaacaa agttggaggc atcacactac
 aaacttcaaa atatattaca aagctatagt aacccaaaca gcatggcact ggcataaaaa
 cagacaaata taccaataga acagaataga ggacccagat ataaatccac acattcatat
 ccaattcatc tttgacaaag gtacaaagaa cgtacaatgg aaaaaggata gtcttttcaa
 caaatgctgc tggaaaaact ggataaacta tatgcagaag aatgaaacta aacccctatc
 actcagcata cacaaaaatc aaatcaaaat ggattaagat ttgaatgtaa cacctgaaat
 tatgaaacta ctaaaagaga acatttggaa aatgctccaa gacattggtc tcgggcaagc
 aaagattttt ttgtgtaaga cctcacaagt acaaacaaca aaagcaagtg aaaatagaca
 gatgggatta catcaagcta aacagcaaag gaaacaatca acaaaatgaa gagacaactc
 acagaatggc aggaaatatt tgcaaactac ccatttgaca agggattcat aatcagaata
 tataagaagc tcaaacaaca gcaaaaacaa aacaaaacaa aatacaatct gatttttaaa
 tgggcaaaag attggaatag acatttctca aaagaagcca tacaaatggc taacaggtat
 atgaaaaaat gttcaacatc actaatcacc agagaaatgc aaatcaaaac cacagtgcag
 tatcatttaa ccccagttaa aatggctgtg tcaaaagaaa caaagagtaa cagatgctgg
 taaggatgtg gagaaagggg aaccctccgt cttacactgc tgatgggaat gtcaactggt
 atagccccta tgggggacag tataaagctt cctcaaaaac ctaaaaataa aactaccaag
 tgatccagca attccactac tgtgtatata ttcaaaggaa agaaaatcaa tataccaaag
 cgacatctat gctcccatgt ttattgcagc actattcacg atagccaaga catggaagca
 actgaagtgc tcatcaacag atgaataaag agaaagtagt acacacacac gatggaatat
 tattcagcca ttaaaaaaaa aagccaggag cgat
 R
 gctcacactt gggaggcaga ggcaggataa tctcttggcg caagagttca agaccagcct
 ggacaacata gggagacccc atctctacta tattaaaaaa aaaaaaaaaa agccaggcat
 gatggtgtgt gcctgtagta ccagctactc tggaggctga ggggaggatt gcttaaacct
 gggagttcaa ggctgcaatg agccgtgatt gcaccactgc actccagcct aggcagcaga
 tcgagaaaaa aaaaaagaaa gaaagaaaga aagaaagaaa agatcctgtc acttgcagca
 acatggatgg aactggaggt tgttctgtaa agtgaaataa gctaggcaca gaaagacaca
 tatcacacat tctcactcat acatgggagc taaaaacgcg gctctcatgg agagagagta
 gaatgttggt taccagaggc tggaagggga gcagggaggg aggaataaag gggaaaaaaa
 gaatataaat gtatttataa ccactgaact gcatacttaa atatggtaaa gaggtaCTGA
 CCATTTTTGA TATGGGTTAA TAAAAAGGAA TAAGAGCAAA AAATTTAAAA AATGATAAAG
 AGAGCAAATT ACATAGGTAT ATTTTACCTC AATAAAAAGA AAAAAGAAAA AAAACTTGAA
 AAATTGGCtt caaatcagga tccaaacaag cttcactcat tgcatttggt ggctgtgtct
 ctgcagactc cttcaatcta caaattcctc ctcttttttc ctccttgtag cttttttttt
 ccccaagaaa ctgagccatg tgccatctag agttccccgc attccaggcc ttgtgtggca
 tctctgcagg gtctttccac aggatcctct gtctgacctc gttggctggt agatctagag
 gcctCCTTTC CCACGCTGGG GTGTGCAGGT GAGCTACCTC ACAGGTGGCA GGCGCTCCCT
 CAGCATCAAG ATGGGAGACA GCGAGCCTGC TGGCTTCTCT TTTCCTGAGC CTGGAGAAAG
 GTTTCAGGTG TCTCACCTGG CCATCATTTT AGGGCTTCCC ATCAGGTTTC TGCCTGAGG

GeneView

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss1655483	HapMap-CEU	European	120	IG		0.217	0.783	0.371	0.108	0.892
	HapMap-HCB	Asian	90	IG		0.222	0.778	0.403	0.111	0.889
	HapMap-JPT	Asian	90	IG		0.111	0.889	0.752	0.056	0.944
	HapMap-YRI	Sub-Saharan African	114	IG		0.140	0.860	0.584	0.070	0.930
ss23787515	AFD_EUR_PANEL	European	48	IG		0.083	0.917	1.000	0.042	0.958
	AFD_AFR_PANEL	African American	46	IG		0.261	0.739	0.479	0.130	0.870
	AFD_CHN_PANEL	Asian	44	IG		0.227	0.773	0.584	0.114	0.886
ss69246467	HapMap-CEU	European	120	GF		0.217	0.783		0.108	0.892
	HapMap-HCB	Asian	90	GF		0.200	0.800		0.100	0.900
	HapMap-JPT	Asian	90	GF		0.111	0.889		0.056	0.944
	HapMap-YRI	Sub-Saharan African	120	GF	0.050	0.133	0.817		0.117	0.883

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	UNKNOWN