Os04g0434300 (Os04g0434300)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:365532 UniGene Os.11755 Oryza sativa (rice) Os04g0434300

Links

Os04g0434300 (Os04g0434300)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001052840.1	Os04g0434300	O. sativa	100.0	620
NP_565035.1	radical SAM domain-containing protein / TRAM domain-containing protein	A. thaliana	78.8	598
XP_001695682.1	predicted protein	C. reinhardtii	65.3	434
NP_060244.2	CDK5 regulatory subunit associated protein 1-like 1	H. sapiens	58.3	506
NP_611207.1	CG6550 CG6550-PA	D. melanogaster	57.0	495
NP_001084956.1	hypothetical protein LOC432014	X. laevis	56.9	492
NP_653119.1	CDK5 regulatory subunit associated protein 1-like 1	M. musculus	55.8	509
NP_956921.1	CDK5 regulatory subunit associated protein 1-like 1	D. rerio	54.5	479
NP_740783.2	Y92H12BL.1	C. elegans	52.6	352

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	leaf; unspecified tissue; whole plant; stem; mixed; callus; panicle; root; flower

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AK101879.1	Oryza sativa Japonica Group cDNA clone:J033070J24, full insert sequence	P
	NM_001059375.1	Oryza sativa (japonica cultivar-group) Os04g0434300 (Os04g0434300) mRNA, partial cds	P

EST sequences (10 of 21) [Show all sequences]

AU056428.1	Clone S20574_3A	leaf		P
AU056429.1	Clone S20574_4Z	leaf		PA
CB630436.1	Clone OSIIEb07G06	leaf	5' read	P
CB630437.1	Clone OSIIEb07G06	leaf	3' read	P
CR283905.1	Clone p889e12p3	unspecified tissue		PA
CR285415.1	Clone p640d03p5	unspecified tissue		P
CR285434.1	Clone p640d03p3	unspecified tissue		PA
CF990284.1		whole plant	5' read	P
CK051415.1		panicle	5' read	P
CK072533.1		panicle	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria