| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 147359 | hypothetical | BPSL2576 | hypothetical protein No significant database matches | genbank | 52210601 | CAH36584.1 | 211 | 3101269 | 3101904 | |
| 147360 | hypothetical | BPSL2577 | hypothetical protein No significant database matches | genbank | 52210602 | CAH36585.1 | 100 | 3101933 | 3102235 | |
| 147361 | hypothetical | BPSL2578 | hypothetical protein C-terminus is similar to the C-terminal region of Rhizobium loti hypothetical protein Msr8070 SWALL:Q984B8 (EMBL:AP003013) (87 aa) fasta scores: E(): 8.7, 34.88% id in 43 aa | genbank | 52210603 | CAH36586.1 | 68 | 3102329 | 3102535 | |
| 147362 | hypothetical | BPSL2579 | hypothetical protein Weakly similar to Lactococcus delbrueckii bacteriophage LL-H DnaA analog SWALL:Q8SDH3 (EMBL:L46883) (299 aa) fasta scores: E(): 9.6e-05, 24.9% id in 261 aa, and to Bacteriophage phi ETA orf22 SWALL:Q9G023 (EMBL:AP001553) (256 aa) fasta scores: E(): 0.00017, 22.77% id in 202 aa | genbank | 52210604 | CAH36587.1 | 352 | 3102532 | 3103590 | |
| 147363 | hypothetical | BPSL2580 | hypothetical protein Doubtful CDS. No significant database matches | genbank | 52210605 | CAH36588.1 | 91 | 3103587 | 3103862 | |
| 147364 | hypothetical | BPSL2581 | hypothetical protein Doubtful CDS. No significant database matches | genbank | 52210606 | CAH36589.1 | 116 | 3103855 | 3104205 | |
| 147365 | hypothetical | BPSL2582 | hypothetical protein Similar to Escherichia coli O157:H7 putative DNA binding protein z3946 or ecs3513 SWALL:Q8X969 (EMBL:AE005493) (68 aa) fasta scores: E(): 0.058, 29.5% id in 61 aa, and to Escherichia coli prophage cp4-57 regulatory protein alpa or alp or b2624 SWALL:ALPA_ECOLI (SWALL:P33997) (70 aa) fasta scores: E(): 0.28, 35.59% id in 59 aa | genbank | 52210607 | CAH36590.1 | 69 | 3104211 | 3104420 | |
| 147366 | hypothetical | BPSL2583 | hypothetical protein No significant database matches | genbank | 52210608 | CAH36591.1 | 181 | 3104506 | 3105051 | |
| 147367 | hypothetical | BPSL2584 | hypothetical protein No significant database matches | genbank | 52210609 | CAH36592.1 | 70 | 3105139 | 3105351 | |
| 147368 | hypothetical | BPSL2585 | hypothetical protein No significant database matches | genbank | 52210610 | CAH36593.1 | 95 | 3105344 | 3105631 | |
| 147369 | hypothetical | BPSL2586 | putative phage integrase Similar to Ralstonia solanacearum putative integrase prophage protein rsc1896 or rs03460 SWALL:Q8XY67 (EMBL:AL646067) (411 aa) fasta scores: E(): 6.6e-91, 56.55% id in 412 aa, and to Agrobacterium tumefaciens phage-related integrase int or atu3831 or agr_l_2007 SWALL:Q8U997 (EMBL:AE009314) (396 aa) fasta scores: E(): 2.5e-74, 52.4% id in 395 aa | genbank | 52210611 | CAH36594.1 | 422 | 3105703 | 3106971 | |
| 147370 | pseudogene | pseudogene | BPSL2587B | putative integrase prophage protein (fragment) Gene remnant. Similar to internal regions of Ralstonia solanacearum putative integrase prophage protein rsc1896 or rs03460 SWALL:Q8XY67 (EMBL:AL646067) (411 aa) fasta scores: E(): 3.3e-11, 40.76% id in 157 aa, and Xanthomonas axonopodis phage-related integrase IntA or xac1664 SWALL:Q8PLX5 (EMBL:AE011798) (396 aa) fasta scores: E(): 1.8e-09, 39.74% id in 156 aa | genbank | 93 | 3107530 | 3107808 | ||
| 147371 | hypothetical | BPSL2588 | hypothetical protein Doubtful CDS. No significant database matches | genbank | 52210612 | CAH36596.1 | 192 | 3108136 | 3108714 | |
| 147372 | hypothetical | BPSL2589 | putative lipoprotein No significant database matches | genbank | 52210613 | CAH36597.1 | 164 | 3108888 | 3109382 | |
| 147373 | hypothetical | BPSL2590 | probable membrane transport protein Similar to many MFS-family membrane transport proteins including: Escherichia coli shikimate transporter ShiA or b1981 SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 2.2e-46, 36.36% id in 440 aa, Ralstonia solanacearum putative metabolite transport transmembrane protein rsc2856 or rs00249 SWALL:Q8XVH5 (EMBL:AL646072) (439 aa) fasta scores: E(): 9.7e-135, 85.84% id in 438 aa and Pseudomonas aeruginosa probable MFS transporter pa3749 SWALL:Q9HXP5 (EMBL:AE004794) (437 aa) fasta scores: E(): 8.6e-119, 76.83% id in 436 aa | genbank | 52210614 | CAH36598.1 | 437 | 3109801 | 3111114 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 147374 | hypothetical | BPSL2591 | putative membrane protein No significant database matches | genbank | 52210615 | CAH36599.1 | 60 | 3111295 | 3111477 | |
| 147375 | waaC2 | hypothetical | BPSL2592 | lipopolysaccharide heptosyltransferase-1 Similar to many proteins involved in LPS core biosynthesis: Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 9.2e-29, 36.54% id in 301 aa, Ralstonia solanacearum probable lipopolysaccharide heptosyltransferase protein RfaC2 or rsp0634 or rs03733 SWALL:Q8XS47 (EMBL:AL646079) (332 aa) fasta scores: E(): 1.5e-85, 69.41% id in 327 aa and to Burkholderia cepacia heptosyltransferase I WaaC SWALL:Q937V3 (EMBL:AJ302064) (331 aa) fasta scores: E(): 1.3e-31, 37% id in 327 aa | genbank | 52210616 | CAH36600.1 | 340 | 3111512 | 3112534 |
| 147376 | hypothetical | BPSL2593 | putative chloride-channel protein Similar to Salmonella typhi voltage-gated Clc-type chloride channel EriC or sty0225 SWALL:ERIC_SALTI (SWALL:Q8Z9B3) (473 aa) fasta scores: E(): 3.1e-19, 29.93% id in 471 aa, and to Burkholderia cepacia chloride-channel protein SWALL:Q93L19 (EMBL:AF029344) (443 aa) fasta scores: E(): 5e-51, 44.86% id in 428 aa, and to Xanthomonas campestris chloride channel yadq or xcc2655 SWALL:AAM41927 (EMBL:AE012377) (454 aa) fasta scores: E(): 3.3e-48, 41.44% id in 444 aa | genbank | 52210617 | CAH36601.1 | 553 | 3112696 | 3114357 | |
| 147377 | hypothetical | BPSL2594 | putative exported protein No significant database matches | genbank | 52210618 | CAH36602.1 | 139 | 3114474 | 3114893 | |
| 147378 | minE | hypothetical | BPSL2595 | cell division topological specificity factor Similar to Neisseria meningitidis cell division topological specificity factor MinE or nma0099 SWALL:MINE_NEIMA (SWALL:Q9JX18) (87 aa) fasta scores: E(): 6.1e-14, 54.76% id in 84 aa, Ralstonia solanacearum probable cell division topological specificity factor protein MinE or rsc3366 or rs02641 SWALL:Q8XU28 (EMBL:AL646075) (84 aa) fasta scores: E(): 1.3e-23, 83.33% id in 84 aa and to Escherichia coli, and Escherichia coli O157:H7 cell division topological specificity factor MinE or b1174 or z1936 or ecs1668 SWALL:MINE_ECOLI (SWALL:P18198) (88 aa) fasta scores: E(): 1.3e-09, 43.52% id in 85 aa | genbank | 52210619 | CAH36603.1 | 84 | 3115015 | 3115269 |
| 147379 | minD | hypothetical | BPSL2596 | septum site-determining protein Similar to Escherichia coli, and Escherichia coli O157:H7 septum site-determining protein MinD or b1175 or z1937 or ecs1669 SWALL:MIND_ECOLI (SWALL:P18197) (269 aa) fasta scores: E(): 1.6e-74, 74.34% id in 269 aa and to Ralstonia solanacearum probable septum site-determining protein MinD or rsc3365 or rs02640 SWALL:Q8XU29 (EMBL:AL646075) (271 aa) fasta scores: E(): 5e-87, 84.5% id in 271 aa | genbank | 52210620 | CAH36604.1 | 271 | 3115282 | 3116097 |
| 147380 | minC | hypothetical | BPSL2597 | probable septum site-determining protein Similar to Neisseria meningitidis probable septum site-determining protein MinC or nmb0170 SWALL:MINC_NEIMB (SWALL:Q9K1I0) (237 aa) fasta scores: E(): 8.9e-14, 34.74% id in 259 aa, and to Burkholderia cepacia putative MinC SWALL:Q9AEN4 (EMBL:AJ293306) (186 aa) fasta scores: E(): 1.1e-33, 75.24% id in 202 aa, and to Ralstonia solanacearum probable septum site-determining protein MinC or rsc3364 or rs02639 SWALL:Q8XU30 (EMBL:AL646075) (255 aa) fasta scores: E(): 6.3e-24, 58.36% id in 269 aa. Note the N-terminal extension of the predicted product of this CDS compared to that predicted for Burkholderia cepacia. | genbank | 52210621 | CAH36605.1 | 270 | 3116156 | 3116968 |
| 147381 | hypothetical | BPSL2598 | putative acetyltransferase protein No significant database matches | genbank | 52210622 | CAH36606.1 | 190 | 3117122 | 3117694 | |
| 147382 | hypothetical | BPSL2599 | hypothetical protein No significant database matches | genbank | 52210623 | CAH36607.1 | 90 | 3118611 | 3118883 | |
| 147383 | serS | hypothetical | BPSL2600 | seryl-tRNA synthetase Similar to Escherichia coli, and Escherichia coli O157:H7 seryl-tRNA synthetase SerS or b0893 or z1239 or ecs0978 SWALL:SYS_ECOLI (SWALL:P09156) (430 aa) fasta scores: E(): 1.9e-104, 62.7% id in 429 aa, and to Burkholderia cepacia putative seryl-tRNA synthetase SerS SWALL:Q9AEN2 (EMBL:AJ293306) (433 aa) fasta scores: E(): 4.1e-158, 93.3% id in 433 aa | genbank | 52210624 | CAH36608.1 | 433 | 3119313 | 3120614 |
| 147384 | hypothetical | BPSL2601 | hypothetical protein No significant database matches | genbank | 52210625 | CAH36609.1 | 103 | 3120727 | 3121038 | |
| 147385 | hypothetical | BPSL2602 | putative ATPase protein Similar to many proteins of undefined function including: Ralstonia solanacearum hypothetical protein rsc2338 or rs01208 SWALL:Q8XWY2 (EMBL:AL646069) blast scores: E(): e-171, score: 1537 72% id, and to Neisseria meningitidis hypothetical protein Nma1433 SWALL:Q9JU96 (EMBL:AL162755) blast scores: E(): e-170, score: 1529 68% id | genbank | 52210626 | CAH36610.1 | 455 | 3121078 | 3122445 | |
| 147386 | hypothetical | BPSL2603 | probable outer-membrane lipoproteins carrier protein Similar to Ralstonia solanacearum probable outer-membrane lipoproteins carrier protein precursor LolA or rsc2340 or rs01206 SWALL:LOLA_RALSO (SWALL:Q8XWY0) (215 aa) fasta scores: E(): 4.8e-41, 57.94% id in 214 aa and to Neisseria meningitidis outer-membrane lipoproteins carrier protein precursor LolA or nmb0622 SWALL:LOLA_NEIMB (SWALL:P57068) (207 aa) fasta scores: E(): 1.5e-21, 41.34% id in 208 aa | genbank | 52210627 | CAH36611.1 | 238 | 3122575 | 3123291 | |
| 147387 | hypothetical | BPSL2604 | putative cell division protein Similar to many involved in cell-division or sporulation: Coxiella burnetii cell division protein FtsK homolog or spoIIIE SWALL:FTSK_COXBU (SWALL:P39920) (778 aa) fasta scores: E(): 5.2e-130, 50.06% id in 765 aa, and to Ralstonia solanacearum probable cell division FtsK transmembrane protein or rsc2341 or rs01205 SWALL:Q8XWX9 (EMBL:AL646069) (781 aa) fasta scores: E(): 4.3e-202, 71.02% id in 780 aa | genbank | 52210628 | CAH36612.1 | 822 | 3123349 | 3125817 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 147388 | trxB | hypothetical | BPSL2605 | thioredoxin reductase Similar to Escherichia coli, and Escherichia coli O157:H7 thioredoxin reductase TrxB or b0888 or z1232 or ecs0973 SWALL:TRXB_ECOLI (SWALL:P09625) (320 aa) fasta scores: E(): 4.2e-82, 67.39% id in 319 aa, and to Vibrio cholerae thioredoxin reductase TrxB or vc1182 SWALL:TRXB_VIBCH (SWALL:Q9KSS4) (318 aa) fasta scores: E(): 4.3e-85, 69.52% id in 315 aa | genbank | 52210629 | CAH36613.1 | 320 | 3125983 | 3126945 |
| 147389 | hypothetical | BPSL2606 | hypothetical protein Similar in parts to severalm proteins of undefined function including: Ralstonia solanacearum hypothetical protein rsc2343 or rs01203 SWALL:Q8XWX7 (EMBL:AL646069) (221 aa) fasta scores: E(): 1.9e-34, 56.94% id in 216 aa and Xanthomonas campestris hypothetical protein Xcc1705 SWALL:AAM40999 (EMBL:AE012272) (181 aa) fasta scores: E(): 3.1e-10, 36.84% id in 171 aa | genbank | 52210630 | CAH36614.1 | 245 | 3127111 | 3127848 | |
| 147390 | hypothetical | BPSL2607 | putative membrane protein Similar to many membrane proteins including Salmonella typhimurium putative inner membrane protein Yigc or stm3978 or stm3738 SWALL:Q8ZL43 (EMBL:AE008873) (205 aa) fasta scores: E(): 3.5e-20, 37.18% id in 199 aa and to Ralstonia solanacearum probable transmembrane protein rsc2344 or rs01202 SWALL:Q8XWX6 (EMBL:AL646069) (207 aa) fasta scores: E(): 1.3e-42, 53.88% id in 206 aa | genbank | 52210631 | CAH36615.1 | 206 | 3127874 | 3128494 | |
| 147391 | hypothetical | BPSL2608 | ABC transporter, ATP-binding component Similar to Rhizobium loti ATP-binding component of ABC sugar transporter mlr3054 SWALL:Q98H30 (EMBL:AP003001) (371 aa) fasta scores: E(): 4.4e-70, 55.49% id in 373 aa and to Rhizobium loti ABC transporter, ATP-binding component mlr6654 SWALL:Q988P3 (EMBL:AP003009) (366 aa) fasta scores: E(): 2.8e-69, 56.95% id in 374 aa. See BPSL261 as a possible indictation as to the substrate of this transport system. | genbank | 52210632 | CAH36616.1 | 372 | 3128727 | 3129845 | |
| 147392 | hypothetical | BPSL2609 | ABC transporter, membrane permease Similar to many ABC-transport proteins including: Brucella melitensis sugar transport system permease protein bmeii0592 SWALL:Q8YCE0 (EMBL:AE009695) (293 aa) fasta scores: E(): 8.9e-75, 64.15% id in 279 aa, and to Rhizobium loti ABC transporter, permease protein mlr6653 SWALL:Q988P4 (EMBL:AP003009) (292 aa) fasta scores: E(): 4.5e-70, 59.14% id in 279 aa. See BPSL261 as a possible indictation as to the substrate of this transport system. | genbank | 52210633 | CAH36617.1 | 285 | 3129946 | 3130803 | |
| 147393 | hypothetical | BPSL2610 | ABC transporter, membrane permease Similar to Pseudomonas aeruginosa probable permease of ABC sugar transporter Pa3189 SWALL:Q9HZ49 (EMBL:AE004742) (310 aa) fasta scores: E(): 4e-77, 60.92% id in 302 aa, and to Rhizobium meliloti putative transport system permease ABC transporter protein r03300 or smc04395 SWALL:Q92KZ8 (EMBL:AL591793) (292 aa) fasta scores: E(): 6e-73, 60.49% id in 281 aa. See BPSL261 as a possible indictation as to the substrate of this transport system. | genbank | 52210634 | CAH36618.1 | 312 | 3130793 | 3131731 | |
| 147394 | malE | hypothetical | BPSL2611 | maltose-binding protein Highly similar to Burkholderia pseudomallei maltose-binding protein MalE SWALL:Q9F7V0 (EMBL:AF274304) (416 aa) fasta scores: E(): 5.6e-161, 99.76% id in 416 aa. Also similar to many other ABC transporter, solute-binding proteins e.g. Rhizobium loti ABC transporter, substrate-binding protein mlr6651 SWALL:Q988P6 (EMBL:AP003009) (419 aa) fasta scores: E(): 2.3e-59, 41.7% id in 398 aa | genbank | 52210635 | CAH36619.1 | 415 | 3131888 | 3133135 |
| 147395 | zwf | hypothetical | BPSL2612 | glucose-6-phosphate 1-dehydrogenase Similar to Pseudomonas aeruginosa glucose-6-phosphate 1-dehydrogenase Zwf or pa3183 SWALL:G6PD_PSEAE (SWALL:O68282) (489 aa) fasta scores: E(): 1.1e-88, 46.25% id in 480 aa and to Ralstonia solanacearum probable glucose-6-phosphate 1-dehydrogenase oxidoreductase protein Zwf or rsp1559 or rs02115 SWALL:Q8XPS9 (EMBL:AL646085) (489 aa) fasta scores: E(): 1.9e-109, 56.19% id in 484 aa | genbank | 52210636 | CAH36620.1 | 489 | 3133594 | 3135063 |
| 147396 | pgl | hypothetical | BPSL2613 | 6-phosphogluconolactonase Similar to Pseudomonas aeruginosa 6-phosphogluconolactonase Pgl or DevB or pa3182 SWALL:6PGL_PSEAE (SWALL:Q9X2N2) (238 aa) fasta scores: E(): 4e-21, 41.66% id in 216 aa, and to Rhizobium meliloti 6-phosphogluconolactonase Pgl or DevB or r00703 or smc03069 SWALL:6PGL_RHIME (SWALL:Q9Z3S1) (232 aa) fasta scores: E(): 5e-25, 40.96% id in 227 aa | genbank | 52210637 | CAH36621.1 | 226 | 3135151 | 3135831 |
| 147397 | glk | hypothetical | BPSL2614 | glucokinase Similar to Escherichia coli, and Escherichia coli O157:H7 glucokinase Glk or b2388 or z3654 or ecs3268 SWALL:GLK_ECOLI (SWALL:P46880) (321 aa) fasta scores: E(): 9e-49, 46.2% id in 316 aa and to Neisseria meningitidis glucokinase Glk or nma1607 or nmb1390 SWALL:GLK_NEIMA (SWALL:Q9JQX3) (328 aa) fasta scores: E(): 4.6e-57, 49.54% id in 327 aa | genbank | 52210638 | CAH36622.1 | 641 | 3135809 | 3137734 |
| 147398 | hypothetical | BPSL2615 | ABC transporter, substrate binding component Similar to many membrane transport proteins including: Escherichia coli cystine-binding periplasmic protein precursor FliY or b1920 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 4.2e-31, 40.23% id in 251 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa0314 SWALL:Q9I6H7 (EMBL:AE004469) (256 aa) fasta scores: E(): 1e-47, 53.22% id in 248 aa, and to Deinococcus radiodurans amino acid ABC transporter, periplasmic amino acid-binding protein dr0564 SWALL:Q9RWV1 (EMBL:AE001914) (261 aa) fasta scores: E(): 1.5e-39, 47.69% id in 260 aa | genbank | 52210639 | CAH36623.1 | 266 | 3138237 | 3139037 | |
| 147399 | hypothetical | BPSL2616 | putative ABC-family amino acid transporter, permease component Similar to Salmonella typhimurium, and Salmonella typhi putative ABC-type amino acid transporter, permease component YecS or stm1952 or sty2160 SWALL:Q8XET2 (EMBL:AE008786) (222 aa) fasta scores: E(): 3.7e-34, 45.49% id in 211 aa, and to Caulobacter crescentus cystine ABC tranporter, permease protein, putative cc1440 SWALL:Q9A8B4 (EMBL:AE005818) (219 aa) fasta scores: E(): 6.6e-34, 48.81% id in 211 aa | genbank | 52210640 | CAH36624.1 | 219 | 3139123 | 3139782 | |
| 147400 | hypothetical | BPSL2617 | putative ABC-family amino acid transporter, ATP-binding component Similar to Escherichia coli, and Escherichia coli O157:H7 glutamate/aspartate transport ATP-binding protein GltL or b0652 or z0802 or ecs0691 SWALL:GLTL_ECOLI (SWALL:P41076) (241 aa) fasta scores: E(): 8.5e-62, 75.93% id in 241 aa, and to Salmonella typhimurium, and Salmonella typhi ABC superfamily GltL or stm0662 or sty0707 SWALL:Q8XG42 (EMBL:AE008726) (241 aa) fasta scores: E(): 5.8e-62, 76.34% id in 241 aa | genbank | 52210641 | CAH36625.1 | 241 | 3139829 | 3140554 | |
| 147401 | hypothetical | BPSL2618 | putative 1-aminocyclopropane-1-carboxylate deaminase Similar to Pseudomonas sp. 1-aminocyclopropane-1-carboxylate deaminase SWALL:1A1D_PSESP (SWALL:Q00740) (338 aa) fasta scores: E(): 6.3e-35, 42.09% id in 335 aa, Salmonella typhimurium putative 1-cyclopropane-carboxylate deaminase YedO or stm1953 SWALL:Q8ZNT7 (EMBL:AE008786) (328 aa) fasta scores: E(): 2.8e-72, 63.46% id in 323 aa, and to Pyrococcus abyssi putative 1-aminocyclopropane-1-carboxylate deaminase pab2303 SWALL:1A1D_PYRAB (SWALL:Q9V2L2) (330 aa) fasta scores: E(): 5e-32, 40.61% id in 325 aa | genbank | 52210642 | CAH36626.1 | 339 | 3140625 | 3141644 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 147402 | hypothetical | BPSL2619 | hypothetical protein Weakly similar to Xanthomonas axonopodis hypothetical protein Xac4063 SWALL:Q8PFC0 (EMBL:AE012054) (154 aa) fasta scores: E(): 9.1e-10, 40.29% id in 134 aa | genbank | 52210643 | CAH36627.1 | 155 | 3141641 | 3142108 | |
| 147403 | hypothetical | BPSL2620 | MFS-family transport protein Similar to Salmonella typhimurium MFS family multidrug transport protein, bicyclomycin resistance protein Bcr or stm2221 SWALL:Q8ZNJ7 (EMBL:AE008799) (396 aa) fasta scores: E(): 6.2e-44, 34.5% id in 397 aa and to Escherichia coli bicyclomycin resistance protein Bcr or bica or bicr or sur or suxa or b2182 SWALL:BCR_ECOLI (SWALL:P28246) (396 aa) fasta scores: E(): 2e-43, 33.93% id in 386 aa | genbank | 52210644 | CAH36628.1 | 411 | 3142218 | 3143453 | |
| 147404 | hypothetical | BPSL2621 | putative membrane protein No significant database matches | genbank | 52210645 | CAH36629.1 | 206 | 3143540 | 3144160 | |
| 147405 | hypothetical | BPSL2622 | hypothetical protein No significant database matches | genbank | 52210646 | CAH36630.1 | 152 | 3144260 | 3144718 | |
| 147406 | hemL | hypothetical | BPSL2623 | glutamate-1-semialdehyde 2,1-aminomutase Similar to Neisseria meningitidis glutamate-1-semialdehyde 2,1-aminomutase HemL or nmb1864 SWALL:GSA_NEIMB (SWALL:Q9JXW0) (427 aa) fasta scores: E(): 3.2e-104, 66.82% id in 425 aa, and to Ralstonia solanacearum probable glutamate-1-semialdehyde 2,1-aminomutase protein HemL or rsc0666 or rs01571 SWALL:Q8Y1M4 (EMBL:AL646060) (433 aa) fasta scores: E(): 7.7e-118, 76.69% id in 429 aa | genbank | 52210647 | CAH36631.1 | 427 | 3145160 | 3146443 |
| 147407 | ribD | hypothetical | BPSL2624 | multifunctional riboflavin biosynthetic protein [deaminase, reductase Similar to Haemophilus influenzae riboflavin biosynthesis protein ribd [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase ribd or ribg or hi0944 SWALL:RIBD_HAEIN (SWALL:P44326) (372 aa) fasta scores: E(): 4.5e-54, 47.73% id in 375 aa, and to Ralstonia solanacearum probable riboflavin biosynthesis bifunctional ribd : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6- ribd or rsc0715 or rs05138 SWALL:Q8Y1H5 (EMBL:AL646060) (370 aa) fasta scores: E(): 6.7e-94, 67.48% id in 369 aa | genbank | 52210648 | CAH36632.1 | 378 | 3146472 | 3147608 |
| 147408 | ribE | hypothetical | BPSL2625 | riboflavin synthase alpha chain Similar to Photobacterium phosphoreum riboflavin synthase alpha chain RibE SWALL:RISA_PHOPO (SWALL:P51961) (218 aa) fasta scores: E(): 3.9e-26, 45.77% id in 201 aa, and to Ralstonia solanacearum probable riboflavin synthase RibE or rsc0714 or rs05139 SWALL:Q8Y1H6 (EMBL:AL646060) (217 aa) fasta scores: E(): 1.8e-53, 75.37% id in 199 aa | genbank | 52210649 | CAH36633.1 | 204 | 3147623 | 3148237 |
| 147409 | ribB | hypothetical | BPSL2626 | 3,4-dihydroxy-2-butanone 4-phosphate synthase Similar to Photobacterium phosphoreum 3,4-dihydroxy-2-butanone 4-phosphate synthase ribB SWALL:RIBB_PHOPO (SWALL:P51962) (363 aa) fasta scores: E(): 1.7e-66, 51.63% id in 368 aa, and to Ralstonia solanacearum probable riboflavin biosynthesis bifunctional protein : GTP cyclohydrolase ii and 3,4-dihydroxy-2-butanone-4-phosphate synthase ribab or rsc0713 or rs05140 SWALL:Q8Y1H7 (EMBL:AL646060) (399 aa) fasta scores: E(): 9e-100, 66.41% id in 393 aa. Note the alternative possible translational start site at codon 22 | genbank | 52210650 | CAH36634.1 | 378 | 3148701 | 3149837 |
| 147410 | ribH | hypothetical | BPSL2627 | 6,7-dimethyl-8-ribityllumazine synthase Similar to Neisseria meningitidis 6,7-dimethyl-8-ribityllumazine synthase RibH or nma0886 or nmb0684 SWALL:RISB_NEIMA (SWALL:Q9JQV6) (158 aa) fasta scores: E(): 4.4e-28, 61.93% id in 155 aa, and to Ralstonia solanacearum probable riboflavin synthase RibH or rsc0712 or rs05141 SWALL:Q8Y1H8 (EMBL:AL646060) (164 aa) fasta scores: E(): 4.7e-39, 75.61% id in 164 aa | genbank | 52210651 | CAH36635.1 | 173 | 3149917 | 3150438 |
| 147411 | nusB | hypothetical | BPSL2628 | probable N utilization substance protein B Similar to Escherichia coli, and Escherichia coli O157:H7 N utilization substance protein B NusB or SsyB or b0416 or z0518 or ecs0469 SWALL:NUSB_ECOLI (SWALL:P04381) (139 aa) fasta scores: E(): 5.6e-17, 44.11% id in 136 aa, and to Ralstonia solanacearum N utilization substance protein B NusB or rsc0711 or rs05142 SWALL:Q8Y1H9 (EMBL:AL646060) (161 aa) fasta scores: E(): 3.6e-33, 63.12% id in 141 aa | genbank | 52210652 | CAH36636.1 | 145 | 3150435 | 3150872 |
| 147412 | hypothetical | BPSL2629 | putative aminotransferase Similar to many aminotransferases including: Ralstonia solanacearum putative aminotransferase protein rsc0710 or rs05143 SWALL:Q8Y1I0 (EMBL:AL646060) (394 aa) fasta scores: E(): 3.3e-108, 73.52% id in 389 aa and to Thermus thermophilus aspartate aminotransferase AspC SWALL:AAT_THETH (SWALL:Q56232) (385 aa) fasta scores: E(): 2.7e-36, 35.53% id in 394 aa | genbank | 52210653 | CAH36637.1 | 416 | 3150880 | 3152130 | |
| 147413 | hypothetical | BPSL2630 | putative lipoprotein Similar to Ralstonia solanacearum probable transmembrane protein rsc0709 or rs05144 SWALL:Q8Y1I1 (EMBL:AL646060) (362 aa) fasta scores: E(): 7.5e-43, 48.54% id in 344 aa | genbank | 52210654 | CAH36638.1 | 355 | 3152745 | 3153812 | |
| 147414 | ubiD | hypothetical | BPSL2631 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase highly similar to Neisseria meningitidis 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD or nmb1694 SWALL:UBID_NEIMB (SWALL:Q9JY86) (494 aa) fasta scores: E(): 7.1e-67, 72.65% id in 523 aa and to Salmonella typhimurium 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ubid or stm3978 or stmd1.11 SWALL:UBID_SALTY (SWALL:Q9L6M0) (492 aa) fasta scores: E(): 6.1e-64, 67.95% id in 518 aa | genbank | 52210655 | CAH36639.1 | 519 | 3154437 | 3155996 |
| 147415 | hypothetical | BPSL2632 | putative membrane protein Weakly similar to Pseudomonas aeruginosa chemotactic transduction protein ChpE or pa0417 SWALL:CHPE_PSEAE (SWALL:O87005) (203 aa) fasta scores: E(): 6.2e-09, 28.57% id in 203 aa, and to Bacillus subtilis hypothetical protein YcgF SWALL:P94381 (EMBL:Z99105) (209 aa) fasta scores: E(): 2.4e-08, 25.72% id in 206 aa | genbank | 52210656 | CAH36640.1 | 224 | 3156037 | 3156711 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 147416 | hypothetical | BPSL2633 | probable dehydratase Similar to Prokaryotic and Eukaryotic dehydratase/racemases: Homo sapiens serine racemase SrR SWALL:SRR_HUMAN (SWALL:Q9GZT4) (340 aa) fasta scores: E(): 2.6e-36, 41.53% id in 313 aa and to Pseudomonas aeruginosa probable serine/threonine dehydratase, degradative pa2683 SWALL:Q9I0F5 (EMBL:AE004696) (320 aa) fasta scores: E(): 2.4e-73, 65.3% id in 317 aa | genbank | 52210657 | CAH36641.1 | 327 | 3157166 | 3158149 | |
| 147417 | hypothetical | BPSL2634 | putative exported protein Similar to the Bordetella pertussis virulence related protein of unknown function Vrg-6 SWALL:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 3.2e-07, 47.22% id in 108 aa. Also similar to and to Ralstonia solanacearum probable transmembrane protein rsc1969 or rs03543 SWALL:Q8XXZ4 (EMBL:AL646067) (106 aa) fasta scores: E(): 1.1e-11, 59.59% id in 99 aa. Note that the product of this CDS is rich in the amino acids Pro, Ala, Val , Tyr and Gly | genbank | 52210658 | CAH36642.1 | 97 | 3158311 | 3158604 | |
| 147418 | hypothetical | BPSL2635 | hypothetical protein Weakly similar to Ralstonia solanacearum hypothetical protein rsp0668 or rs01781 SWALL:Q8XS13 (EMBL:AL646080) (294 aa) fasta scores: E(): 6.7e-34, 47.4% id in 289 aa and to Streptomyces coelicolor hypothetical protein sco3384 or sce126.02C SWALL:Q9X845 (EMBL:AL049630) (420 aa) fasta scores: E(): 9.1e-15, 31.34% id in 319 aa | genbank | 52210659 | CAH36643.1 | 378 | 3159029 | 3160165 | |
| 147419 | hypothetical | BPSL2636 | putative membrane protein Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1385 or rs02073 SWALL:Q8XQA1 (EMBL:AL646084) (183 aa) fasta scores: E(): 9.1e-35, 51.12% id in 178 aa and to Vibrio cholerae hypothetical protein Vc0459 SWALL:Q9KUQ6 (EMBL:AE004132) (185 aa) fasta scores: E(): 3.6e-21, 39.87% id in 163 aa | genbank | 52210660 | CAH36644.1 | 187 | 3160248 | 3160811 | |
| 147420 | hypothetical | BPSL2637 | conserved hypothetical protein Similar to Aquifex aeolicus hypothetical protein Aq_450 SWALL:Y450_AQUAE (SWALL:O66758) (105 aa) fasta scores: E(): 3e-07, 33.75% id in 80 aa and to Chlorobium tepidum hypothetical protein Ct2101 SWALL:AAM73317 (EMBL:AE012959) (110 aa) fasta scores: E(): 3.4e-06, 37.2% id in 86 aa | genbank | 52210661 | CAH36645.1 | 118 | 3160835 | 3161191 | |
| 147421 | hypothetical | BPSL2638 | CrcB-family inner membrane protein Similar to the Escherichia coli membrane protein CrcB the overexpression of which invokes camphor resistance and chromosome condensation SWALL:CRCB_ECOLI (SWALL:P37002) (127 aa) fasta scores: E(): 1.6e-18, 45.37% id in 119 aa. Also similar to Pseudomonas aeruginosa protein CrcB homolog or pa4383 SWALL:CRCB_PSEAE (SWALL:Q9HW19) (127 aa) fasta scores: E(): 5.3e-23, 53.6% id in 125 aa | genbank | 52210662 | CAH36646.1 | 128 | 3161215 | 3161601 | |
| 147422 | hypothetical | BPSL2639 | family S53 non-peptidase homologue Similar to several including: Physarum polycephalum PhP protein Php SWALL:Q94704 (EMBL:X64708) (356 aa) fasta scores: E(): 4.7e-26, 37.32% id in 351 aa and to Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 1.3e-05, 27.86% id in 402 aa | genbank | 52210663 | CAH36647.1 | 406 | 3162211 | 3163431 | |
| 147423 | hypothetical | BPSL2640 | conserved hypothetical protein Similar to many including: Stigmatella aurantiaca methyl transferase SWALL:Q8RJZ2 (EMBL:AJ421825) (242 aa) fasta scores: E(): 1.9e-61, 61.57% id in 242 aa, Rhizobium loti hypothetical protein Mll3908 SWALL:Q98F67 (EMBL:AP003003) (242 aa) fasta scores: E(): 2.6e-60, 61.98% id in 242 aa and to Brucella melitensis ubiquinone/menaquinone biosynthesis methyltransferase UbiE bmei1834 SWALL:Q8YEP4 (EMBL:AE009616) (262 aa) fasta scores: E(): 4.7e-57, 60.41% id in 240 aa | genbank | 52210664 | CAH36648.1 | 242 | 3163699 | 3164427 | |
| 147424 | hypothetical | BPSL2641 | Sir2 family protein Weakly similar to many Prokaryotic and Eukaryotic proteins: Homo sapiens hypothetical protein flj20348 SWALL:Q9NXA8 (EMBL:AK000355) (299 aa) fasta scores: E(): 1.1e-09, 30% id in 190 aa, Pseudomonas aeruginosa probable cobalamin biosynthetic protein pa1125 SWALL:Q9I4L0 (EMBL:AE004542) (250 aa) fasta scores: E(): 3.2e-08, 31.83% id in 267 aa and to Leishmania major regulatory protein Sir2 homolog SWALL:SIR2_LEIMA (SWALL:Q25337) (381 aa) fasta scores: E(): 1.8e-07, 25.49% id in 302 aa | genbank | 52210665 | CAH36649.1 | 416 | 3164671 | 3165921 | |
| 147425 | hypothetical | BPSL2642 | putative methyltransferase Similar to Neisseria meningitidis hypothetical methyltransferase Nmb1328 SWALL:MT04_NEIMB (SWALL:Q9JZ24) (238 aa) fasta scores: E(): 2.7e-51, 62.27% id in 220 aa and to Ralstonia solanacearum hypothetical protein rsc0703 or rs01608 SWALL:Q8Y1I7 (EMBL:AL646060) (251 aa) fasta scores: E(): 2.5e-67, 69.17% id in 253 aa | genbank | 52210666 | CAH36650.1 | 265 | 3166316 | 3167113 | |
| 147426 | hypothetical | BPSL2643 | putative undecaprenol kinase Similar to Neisseria meningitidis putative undecaprenol kinase (EC 2.7.1.66) (bacitracin resistance protein) Upk or BacA or nmb0408 SWALL:UPK_NEIMB (SWALL:Q9K0Z3) (273 aa) fasta scores: E(): 2.8e-57, 53.45% id in 275 aa, and to Pseudomonas aeruginosa putative undecaprenol kinase Upk or BacA or pa1959 SWALL:UPK_PSEAE (SWALL:Q9I2E5) (277 aa) fasta scores: E(): 1.8e-53, 50.72% id in 276 aa | genbank | 52210667 | CAH36651.1 | 276 | 3167269 | 3168099 | |
| 147427 | hypothetical | BPSL2644 | putative exported protein Similar to Ralstonia solanacearum probable transmembrane protein rsc0700 or rs01605 SWALL:Q8Y1J0 (EMBL:AL646060) (204 aa) fasta scores: E(): 1.3e-26, 46.39% id in 194 aa | genbank | 52210668 | CAH36652.1 | 193 | 3168176 | 3168757 | |
| 147428 | hypothetical | BPSL2645 | conserved hypothetical protein Similar to Xanthomonas axonopodis proteinase inhibitor xac0347 SWALL:AAM35239 (EMBL:AE011660) (86 aa) fasta scores: E(): 2e-18, 71.08% id in 83 aa, and to Escherichia coli hypothetical protein YeiW or b2170.1 SWALL:YEIW_ECOLI (SWALL:P58039) (84 aa) fasta scores: E(): 2.9e-17, 63.41% id in 82 aa | genbank | 52210669 | CAH36653.1 | 103 | 3168754 | 3169065 | |
| 147429 | hemN | hypothetical | BPSL2646 | oxygen-independent coproporphyrinogen III oxidase Similar to Alcaligenes eutrophus oxygen-independent coproporphyrinogen III oxidase HemN SWALL:HEMN_ALCEU (SWALL:O34162) (491 aa) fasta scores: E(): 2.8e-93, 54.28% id in 455 aa and to Pseudomonas aeruginosa oxygen-independent coproporphyrinogen III oxidase HemN or pa1546 SWALL:HEMN_PSEAE (SWALL:P77915) (460 aa) fasta scores: E(): 9.4e-89, 49.66% id in 451 aa. Note this CDS is alos similar to BPSL2366 49.024% identity (50.222% ungapped) in 461 aa overlap. | genbank | 52210670 | CAH36654.1 | 464 | 3169253 | 3170647 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 147430 | hypothetical | BPSL2647 | hypothetical protein Doubtful CDS. No significant database matches | genbank | 52210671 | CAH36655.1 | 101 | 3170681 | 3170986 | |
| 147431 | pcm | hypothetical | BPSL2648 | probable protein-L-isoaspartate O-methyltransferase Similar to Aeropyrum pernix protein-L-isoaspartate O-methyltransferase Pcm or ape1011 SWALL:PIMT_AERPE (SWALL:Q9YDA1) (256 aa) fasta scores: E(): 2e-20, 42.26% id in 194 aa and to Ralstonia solanacearum probable protein-L-isoaspartate O-methyltransferase Pcm or rsc0697 or rs01602 SWALL:Q8Y1J3 (EMBL:AL646060) (216 aa) fasta scores: E(): 3.1e-52, 65.43% id in 217 aa | genbank | 52210672 | CAH36656.1 | 217 | 3171093 | 3171746 |
| 147432 | hypothetical | BPSL2649 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0696 or rs01601 SWALL:Q8Y1J4 (EMBL:AL646060) (110 aa) fasta scores: E(): 1.6e-20, 53.63% id in 110 aa and to Neisseria meningitidis hypothetical protein Nma0573 SWALL:Q9JW28 (EMBL:AL162753) (107 aa) fasta scores: E(): 4.6e-14, 45.19% id in 104 aa | genbank | 52210673 | CAH36657.1 | 107 | 3171761 | 3172084 | |
| 147433 | hypothetical | BPSL2650 | putative aminotransferase Similar to Ralstonia solanacearum probable beta-alanine--pyruvate aminotransferase rsp1056 or rs02393 SWALL:Q8XR12 (EMBL:AL646082) (445 aa) fasta scores: E(): 1.6e-122, 73.51% id in 438 aa, and to Rhizobium meliloti putative omega-amino acid--pyruvate aminotransferase protein r02404 or smc01534 SWALL:Q92N34 (EMBL:AL591790) (442 aa) fasta scores: E(): 8.2e-109, 64.31% id in 440 aa | genbank | 52210674 | CAH36658.1 | 442 | 3172177 | 3173505 | |
| 147434 | hypothetical | BPSL2651 | putative exported protein Similar to Ralstonia solanacearum putative urea/short-chain amide-binding signal peptide protein rsc2041 or rs03606 SWALL:Q8XXS2 (EMBL:AL646067) (418 aa) fasta scores: E(): 7.9e-133, 82.61% id in 420 aa and to Yersinia pestis putative substrate-binding periplasmic transport protein ypo1187 SWALL:Q8ZGU0 (EMBL:AJ414147) (422 aa) fasta scores: E(): 8.5e-121, 76.42% id in 420 aa | genbank | 52210675 | CAH36659.1 | 435 | 3173859 | 3175166 | |
| 147435 | hypothetical | BPSL2652 | putative branched-chain amino acid transport system, permease component Similar to Yersinia pestis putative branched-chain amino acid transport system, permease component ypo1188 SWALL:Q8ZGT9 (EMBL:AJ414147) (533 aa) fasta scores: E(): 1.3e-79, 50.48% id in 515 aa and to Ralstonia solanacearum probable permease transporter transmembrane protein rsc2040 or rs03605 SWALL:Q8XXS3 (EMBL:AL646067) (538 aa) fasta scores: E(): 3.8e-109, 64.2% id in 542 aa | genbank | 52210676 | CAH36660.1 | 540 | 3175261 | 3176883 | |
| 147436 | hypothetical | BPSL2653 | putative branched-chain amino acid transport system, permease component Similar to Yersinia pestis putative branched-chain amino acid transport system, permease component ypo1189 SWALL:Q8ZGT8 (EMBL:AJ414147) (358 aa) fasta scores: E(): 2.4e-77, 62.17% id in 341 aa, and to Ralstonia solanacearum probable permease transporter transmembrane protein rsc2039 or rs03604 SWALL:Q8XXS4 (EMBL:AL646067) (396 aa) fasta scores: E(): 1.1e-100, 74.86% id in 362 aa | genbank | 52210677 | CAH36661.1 | 400 | 3176885 | 3178087 | |
| 147437 | hypothetical | BPSL2654 | putative ABC transport ATP-binding subunit Similar to Yersinia pestis putative ABC transport ATP-binding subunit ypo1190 SWALL:Q8ZGT7 (EMBL:AJ414147) (278 aa) fasta scores: E(): 8.5e-43, 61.22% id in 245 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2038 or rs03603 SWALL:Q8XXS5 (EMBL:AL646067) (287 aa) fasta scores: E(): 2e-63, 72.69% id in 282 aa | genbank | 52210678 | CAH36662.1 | 287 | 3178084 | 3178947 | |
| 147438 | hypothetical | BPSL2655 | putative ABC transport ATP-binding subunit Similar to Yersinia pestis putative ABC transport ATP-binding subunit ypo1191 SWALL:Q8ZGT6 (EMBL:AJ414147) (232 aa) fasta scores: E(): 1.6e-45, 60.94% id in 233 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2037 or rs03602 SWALL:Q8XXS6 (EMBL:AL646067) (230 aa) fasta scores: E(): 1.1e-56, 74.34% id in 230 aa | genbank | 52210679 | CAH36663.1 | 230 | 3178952 | 3179644 | |
| 147439 | UreD | hypothetical | BPSL2656 | UreD-family accessory protein Similar to Alcaligenes eutrophus urease accessory protein UreD1 SWALL:URD1_ALCEU (SWALL:O30332) (289 aa) fasta scores: E(): 1.3e-53, 54% id in 287 aa, and to Ralstonia solanacearum probable urease accessory protein UreD or rsc2036 or rs03030 SWALL:Q8XXS7 (EMBL:AL646067) (295 aa) fasta scores: E(): 1.6e-54, 53.87% id in 284 aa | genbank | 52210680 | CAH36664.1 | 332 | 3179763 | 3180761 |
| 147440 | ureA | hypothetical | BPSL2657 | urease gamma subunit Similar to Bordetella bronchiseptica Urease gamma subunit UreA SWALL:URE3_BORBR (SWALL:O06705) (100 aa) fasta scores: E(): 3.3e-29, 82.82% id in 99 aa, and to Alcaligenes eutrophus Urease, structural subunit UreA SWALL:O30334 (EMBL:Y13732) (100 aa) fasta scores: E(): 1.5e-30, 85.85% id in 99 aa | genbank | 52210681 | CAH36665.1 | 100 | 3180983 | 3181285 |
| 147441 | ureB | hypothetical | BPSL2658 | urease beta subunit Similar to Bordetella bronchiseptica urease beta subunit UreB SWALL:URE2_BORBR (SWALL:O06707) (102 aa) fasta scores: E(): 3.2e-24, 64.35% id in 101 aa, and to Pseudomonas aeruginosa urease beta subunit UreB or pa4867 SWALL:Q9HUU6 (EMBL:AE004900) (101 aa) fasta scores: E(): 2.8e-28, 76.23% id in 101 aa | genbank | 52210682 | CAH36666.1 | 101 | 3181375 | 3181680 |
| 147442 | ureC | hypothetical | BPSL2659 | urease alpha subunit Similar to Synechocystis sp. urease alpha subunit UreC or sll1750 SWALL:URE1_SYNY3 (SWALL:P73061) (569 aa) fasta scores: E(): 3.3e-166, 74.86% id in 569 aa, and to Alcaligenes eutrophus urease, structural subunit UreC SWALL:O30337 (EMBL:Y13732) (570 aa) fasta scores: E(): 3.3e-185, 83.12% id in 569 aa | genbank | 52210683 | CAH36667.1 | 568 | 3181745 | 3183451 |
| 147443 | ureE | hypothetical | BPSL2660 | urease accessory protein Similar to Alcaligenes eutrophus urease accessory protein UreE SWALL:UREE_ALCEU (SWALL:O30338) (192 aa) fasta scores: E(): 8.3e-43, 65.62% id in 192 aa and to Ralstonia solanacearum probable urease accessory protein UreE or rsc2031 or rs03601 SWALL:Q8XXT2 (EMBL:AL646067) (211 aa) fasta scores: E(): 5e-47, 65.4% id in 211 aa | genbank | 52210684 | CAH36668.1 | 205 | 3183469 | 3184086 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 147444 | ureF | hypothetical | BPSL2661 | urease accessory protein Similar to Klebsiella aerogenes urease accessory protein UreF SWALL:UREF_KLEAE (SWALL:P18318) (224 aa) fasta scores: E(): 1.5e-15, 33.04% id in 233 aa, and to Ralstonia solanacearum probable urease accessory protein UreF or rsc2030 or rs03600 SWALL:Q8XXT3 (EMBL:AL646067) (229 aa) fasta scores: E(): 1.5e-40, 55.94% id in 227 aa | genbank | 52210685 | CAH36669.1 | 226 | 3184073 | 3184753 |
| 147445 | ureG | hypothetical | BPSL2662 | urease accessory protein Similar to Bordetella bronchiseptica urease accessory protein UreG SWALL:UREG_BORBR (SWALL:O06709) (214 aa) fasta scores: E(): 2.3e-55, 77.83% id in 203 aa and to Ralstonia solanacearum probable urease accessory protein UreG or rsc2029 or rs03595 SWALL:Q8XXT4 (EMBL:AL646067) (210 aa) fasta scores: E(): 5.2e-60, 86.7% id in 203 aa | genbank | 52210686 | CAH36670.1 | 216 | 3184784 | 3185434 |
| 147446 | waaA | hypothetical | BPSL2663 | probable 3-deoxy-D-manno-octulosonic-acid transferase Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 3-deoxy-D-manno-octulosonic-acid transferase KdtA or WaaA SWALL:KDTA_ECOLI (SWALL:P23282) (425 aa) fasta scores: E(): 1.3e-37, 40.44% id in 445 aa and to Burkholderia cepacia kdo transferase WaaA SWALL:Q8VVA1 (EMBL:AJ420777) (452 aa) fasta scores: E(): 6.8e-136, 81.27% id in 454 aa | genbank | 52210687 | CAH36671.1 | 461 | 3185671 | 3187056 |
| 147447 | hypothetical | BPSL2664 | conserved hypothetical protein Similar to Yersinia pestis hypothetical protein Ypo1650 SWALL:Q8ZFP4 (EMBL:AJ414149) (300 aa) fasta scores: E(): 2.3e-53, 51.86% id in 295 aa | genbank | 52210688 | CAH36672.1 | 294 | 3187094 | 3187978 | |
| 147448 | waaC1 | hypothetical | BPSL2665 | lipopolysaccharide heptosyltransferase-1 Similar to Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 2.1e-16, 38.71% id in 310 aa, and to Burkholderia cepacia heptosyltransferase I WaaC SWALL:Q937V3 (EMBL:AJ302064) (331 aa) fasta scores: E(): 1.7e-117, 89.12% id in 331 aa | genbank | 52210689 | CAH36673.1 | 331 | 3187994 | 3188989 |
| 147449 | pgm | hypothetical | BPSL2666 | phosphoglucomutase Similar to Neisseria meningitidis phosphoglucomutase Pgm or nmb0790 SWALL:PGMU_NEIMB (SWALL:P40391) (460 aa) fasta scores: E(): 1.2e-98, 56% id in 466 aa and to Ralstonia solanacearum putative phosphomannomutase or phosphoglucomutase protein rsc0691 or rs01596 SWALL:Q8Y1J9 (EMBL:AL646060) (461 aa) fasta scores: E(): 1.6e-123, 68.46% id in 463 aa | genbank | 52210690 | CAH36674.1 | 464 | 3189170 | 3190564 |
| 147450 | hypothetical | BPSL2667 | putative lipopolysaccharide biosynthesis protein Similar to Escherichia coli lipopolysaccharide biosynthesis protein WzxC or Wzx or b2046 SWALL:WZXC_ECOLI (SWALL:P77377) (492 aa) fasta scores: E(): 0.012, 22.33% id in 412 aa, Ralstonia solanacearum putative lipopolysaccharide O-side chain biosynthesis transmembrane protein rsc0686 or rs01591 SWALL:Q8Y1K4 (EMBL:AL646060) (422 aa) fasta scores: E(): 1.6e-26, 28.7% id in 425 aa and to Salmonella typhimurium O-antigen translocase in LPS biosyntesis WzxE or stm3926 SWALL:Q9L6Q9 (EMBL:AE008883) (416 aa) fasta scores: E(): 5.7e-08, 24.39% id in 410 aa | genbank | 52210691 | CAH36675.1 | 419 | 3190822 | 3192081 | |
| 147451 | hypothetical | BPSL2668 | putative glycosyl transferase Weakly similar to Rhizobium loti probable glycosyl transferase mlr1944 SWALL:Q98JH2 (EMBL:AP002998) (368 aa) fasta scores: E(): 1.2e-09, 31.81% id in 220 aa and to Vibrio cholerae sugar transferase SWALL:O34234 (EMBL:Y07786) (337 aa) fasta scores: E(): 2e-09, 27.14% id in 210 aa | genbank | 52210692 | CAH36676.1 | 278 | 3192078 | 3192914 | |
| 147452 | hypothetical | BPSL2669 | putative glycosyl transferase Similar to Rhizobium meliloti putative glycosyltransferase protein rb0735 or smb21231 SWALL:Q92VG9 (EMBL:AL603644) (384 aa) fasta scores: E(): 1.3e-45, 42.26% id in 362 aa, and to Pseudomonas aeruginosa probable glycosyl transferase pa1385 SWALL:Q9I3V9 (EMBL:AE004568) (374 aa) fasta scores: E(): 4.1e-40, 36.61% id in 366 aa | genbank | 52210693 | CAH36677.1 | 385 | 3192943 | 3194100 | |
| 147453 | hypothetical | BPSL2670 | UDP-glucose 4-epimerase Previously sequenced as Burkholderia pseudomallei putative UDP-glucose 4-epimerase SWALL:O69132 (EMBL:AF064070) (340 aa) fasta scores: E(): 3.1e-125, 100% id in 340 aa and similar to Bacillus subtilis UDP-glucose 4-epimerase GalE SWALL:GALE_BACSU (SWALL:P55180) (339 aa) fasta scores: E(): 6.8e-80, 65.16% id in 333 aa | genbank | 52210694 | CAH36678.1 | 340 | 3194115 | 3195137 | |
| 147454 | hypothetical | BPSL2671 | putative undecaprenyl phosphate N-acetylglucosaminyltransferase Previously sequenced as Burkholderia pseudomallei putative undecaprenyl phosphate N-acetylglucosaminyltransferase SWALL:O69131 (EMBL:AF064070) (368 aa) fasta scores: E(): 1.8e-136, 100% id in 368 aa, and to Sulfolobus acidocaldarius putative UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase GnpTA SWALL:GPT_SULAC (SWALL:P39465) (328 aa) fasta scores: E(): 2.2e-12, 29.21% id in 291 aa | genbank | 52210695 | CAH36679.1 | 368 | 3195165 | 3196271 | |
| 147455 | wbiI | hypothetical | BPSL2672 | putative epimerase/dehydratase polysaccharide-related biosynthesis protein Previously sequenced as Burkholderia pseudomallei putative epimerase/dehydratase WbiI SWALL:O69130 (EMBL:AF064070) (637 aa) fasta scores: E(): 0, 99.68% id in 637 aa and similar to Staphylococcus aureus capsular polysaccharide biosynthesis protein CapD SWALL:CAPD_STAAU (SWALL:P39853) (599 aa) fasta scores: E(): 3.5e-77, 40.51% id in 580 aa and to Burkholderia mallei putative epimerase/dehydratase WbiI SWALL:Q9AEU8 (EMBL:AY028370) (637 aa) fasta scores: E(): 0, 100% id in 637 aa | genbank | 52210696 | CAH36680.1 | 637 | 3196645 | 3198558 |
| 147456 | wbiH | hypothetical | BPSL2673 | putative undecaprenyl phosphate N-acetylglucosaminyltransferase Previously sequenced as Burkholderia pseudomallei putative undecaprenyl phosphate N-acetylglucosaminyltransferase WbiH SWALL:O69129 (EMBL:AF064070) (336 aa) fasta scores: E(): 1e-130, 100% id in 336 aa. Also similar to Xanthomonas axonopodis lipopolysaccharide core biosynthesis protein rfb303 or xac2294 SWALL:AAM37147 (EMBL:AE011866) (322 aa) fasta scores: E(): 8.6e-23, 34.51% id in 310 aa | genbank | 52210697 | CAH36681.1 | 336 | 3198565 | 3199575 |
| 147457 | wbiG | hypothetical | BPSL2674 | putative epimerase/dehydratase Previously sequenced as Burkholderia pseudomallei putative epimerase/dehydratase WbiG SWALL:O69128 (EMBL:AF064070) (321 aa) fasta scores: E(): 8.6e-126, 99.37% id in 321 aa. Also similar to Vibrio cholerae UDP-glucose 4-epimerase GalE or WbfT SWALL:GALE_VIBCH (SWALL:Q56623) (328 aa) fasta scores: E(): 5.1e-38, 37.57% id in 322 aa | genbank | 52210698 | CAH36682.1 | 321 | 3199593 | 3200558 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 147458 | wbiF | hypothetical | BPSL2675 | putative glycosyl transferase Previously sequenced as Burkholderia pseudomallei putative glycosyl transferase WbiF SWALL:O69127 (EMBL:AF064070) (276 aa) fasta scores: E(): 2e-117, 99.63% id in 276 aa. Also similar to Burkholderia mallei putative glycosyl transferase WbiF SWALL:Q9AEU9 (EMBL:AY028370) (276 aa) fasta scores: E(): 1.7e-116, 98.91% id in 276 aa and to Ralstonia solanacearum probable glycosyl transferase protein rsc0688 or rs01593 SWALL:Q8Y1K2 (EMBL:AL646060) (275 aa) fasta scores: E(): 7.4e-23, 32.46% id in 268 aa | genbank | 52210699 | CAH36683.1 | 276 | 3200555 | 3201385 |