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Finding cDNAs
UGID:231103     UniGene Hs.436066     Homo sapiens (human)   LST1 Order cDNA clone, Links
Leukocyte specific transcript 1 (LST1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_009092.2 leukocyte specific transcript 1 isoform 1 H. sapiens 100.0 117
XP_001153790.1 PREDICTED: similar to cLST1/C splice variant isoform 3 P. troglodytes 100.0 91

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; placenta; brain; uncharacterized tissue; vascular; pleura; bone marrow; blood; lung; testis; kidney; uterus; heart; connective tissue; spleen; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.3
UniSTS entry: Chr 6 RH76281
UniSTS entry: RH76316
UniSTS entry: Chr 6 TNFe
UniSTS entry: (n/a)
UniSTS entry: Chr 6 (n/a)
UniSTS entry: Chr 6 D6S2789
UniSTS entry: Chr 6 TNFd
UniSTS entry: Chr 6 TNFd
UniSTS entry: Chr 6 D6S2790
UniSTS entry: RH98268
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

BX647293.1 Homo sapiens mRNA; cDNA DKFZp781G1336 (from clone DKFZp781G1336) PA
NM_007161.2 Homo sapiens leukocyte specific transcript 1 (LST1), transcript variant 1, mRNA PA
NM_205837.1 Homo sapiens leukocyte specific transcript 1 (LST1), transcript variant 2, mRNA PA
NM_205838.1 Homo sapiens leukocyte specific transcript 1 (LST1), transcript variant 3, mRNA PA
NM_205839.1 Homo sapiens leukocyte specific transcript 1 (LST1), transcript variant 4, mRNA PA
NM_205840.1 Homo sapiens leukocyte specific transcript 1 (LST1), transcript variant 5, mRNA PA
Y18487.1 Homo sapiens mRNA for LST-1/K protein P
Y18489.1 Homo sapiens mRNA for LST-1/M protein P
Y18490.1 Homo sapiens mRNA for LST-1/N protein
CR591668.1 full-length cDNA clone CS0DF030YN10 of Fetal brain of Homo sapiens (human) P
DQ099382.1 Homo sapiens leukocyte specific transcript 1 mRNA, complete cds, alternatively spliced P
BC103855.1 Homo sapiens leukocyte specific transcript 1, mRNA (cDNA clone MGC:119006 IMAGE:40003000), complete cds P
BC103856.1 Homo sapiens leukocyte specific transcript 1, mRNA (cDNA clone MGC:119007 IMAGE:40003004), complete cds P
AY852266.1 Homo sapiens LST1/P mRNA, complete cds, alternatively spliced P
AY852265.1 Homo sapiens LST1/O mRNA, complete cds, alternatively spliced P
Y18488.1 Homo sapiens mRNA for LST-1/L protein, partial
Y18486.1 Homo sapiens mRNA for LST-1/J protein P
AF000424.1 Homo sapiens LST1 mRNA, cLST1/C splice variant, complete cds P
AF000425.1 Homo sapiens LST1 mRNA, cLST1/A splice variant, complete cds P
AF000426.1 Homo sapiens LST1 mRNA, cLST1/E splice variant, complete cds P

EST sequences (10 of 74) [Show all sequences]

AA987514.1 Clone IMAGE:1604321 lung 3' read
AI091696.1 Clone IMAGE:1567076 mixed 3' read PA
AI125370.1 Clone IMAGE:1736571 testis 3' read P
CB051850.1 Clone IMAGE:3289976 uncharacterized tissue 3' read A
AI161266.1 Clone IMAGE:1703477 brain 3' read PA
AI192249.1 Clone IMAGE:1722124 uterus 3' read
AI214508.1 Clone IMAGE:1883092 lung 3' read PA
AI300316.1 Clone IMAGE:1894147 placenta 3' read PA
AI309130.1 Clone IMAGE:1913962 kidney 3' read PA
AI424685.1 Clone IMAGE:2104036 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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