23 proteins |
U | COG2948 | Type IV secretory pathway, VirB10 components | Help | |
---|---|---|---|---|---|
4 from | query genome Mesorhizobium loti (Rhizobiales | Alphaproteobacteria) | ||||
mll9603 mlr6405 mlr6955 mlr9259 |
171 letters (r) 0 0 815 = ||| 1 mlr6955 (171) = 207 0 611 = ||| 3 mll9603 (378) = 242 9 433 = | 5 RSc2575 (425) = 238 0 412 = ||| 5 mlr6405 (409) = 246 1 369 = || 5 CC2685 (418) = 262 0 310 = ||| 8 AGpT71 (438) = 286 3 306 = | 8 XFa0040 (469) = 283 3 303 = | 8 XF2049 (466) =
210 3 219 = || 16 CC2422 (383) = 274 5 198 = | 9 XFa0014 (447) = 194 28 198 = ||| 12 AGpA231 (390) = 194 28 193 = ||| 12 SMa1303 (390) = 189 22 187 = ||| 20 mlr9259 (410) = 90 4 181 = ||| 17 BMEII0034 (265) = 182 9 162 = | 14 jhp0036 (376) = 39 9 160 = | 13 HP0042 (233) = 192 15 142 = ||| 15 AGpT13 (377) = 204 109 115 = || 18 RP291 (483) = 49 35 109 = | 18 jhp0476_2 (273) = 49 35 108 = | 18 HP0527_2 (273) = 203 109 103 = || 20 RC0389 (482) = 243 17 73 _ 212 SPBC428.11 (429) COG2873 126 26 67 _ | 37 PA1443 (323) COG1868 5 389 65 _ 255 Cgl1293 (567) COG1461 2 95 65 _ |121 NMB0261 (259) COG0142 144 -120 64 3 BH0295 (195) 61 -10 63 4 all3984 (231) 3 189 61 _ 255 APE1819 (363) COG0585 2 -20 61 13 sll0436 (151)
BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mlr6955 (171 letters) Database: myva 192,987 sequences; 59,019,183 total letters Score E Sequences producing significant alignments: (bits) Value mlr6955 318 4e-87 mll9603 239 2e-63 RSc2575 171 7e-43 mlr6405 163 2e-40 CC2685 146 2e-35 AGpT71 124 1e-28 XFa0040 122 3e-28 XF2049 121 8e-28 CC2422 89 5e-18 XFa0014 81 1e-15 AGpA231 81 1e-15 SMa1303 79 5e-15 mlr9259 77 2e-14 BMEII0034 74 1e-13 jhp0036 67 2e-11 HP0042 66 3e-11 AGpT13 59 4e-09 RP291 49 5e-06 jhp0476_2 47 3e-05 HP0527_2 46 3e-05 RC0389 44 1e-04 SPBC428.11 33 0.39 PA1443 30 2.0 Cgl1293 30 3.1 NMB0261 30 3.7 BH0295 29 3.8 all3984 29 6.0 APE1819 28 8.9 sll0436 28 9.5 # >mlr6955 # Length = 171 # # Score = 318 bits (815), Expect = 4e-87 # Identities = 171/171 (100%), Positives = 171/171 (100%) # # Query: 1 MRKIAYIVAVFKGVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVF 60 # MRKIAYIVAVFKGVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVF # Sbjct: 1 MRKIAYIVAVFKGVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVF 60 # # Query: 61 PNGRSIVLERQPGTDAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVR 120 # PNGRSIVLERQPGTDAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVR # Sbjct: 61 PNGRSIVLERQPGTDAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVR 120 # # Query: 121 ALRGGASDSLSQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDLMLEPYGG 171 # ALRGGASDSLSQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDLMLEPYGG # Sbjct: 121 ALRGGASDSLSQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDLMLEPYGG 171 # # # >mll9603 # Length = 378 # # Score = 239 bits (611), Expect = 2e-63 # Identities = 132/157 (84%), Positives = 148/157 (94%) # # Query: 15 MTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGT 74 # +TEN+YDSPTGRSLLIPQGTR IGQYDN VG GQRRVLLVW+RL+FPNGRSIVLERQPG # Sbjct: 222 VTENIYDSPTGRSLLIPQGTRAIGQYDNAVGSGQRRVLLVWNRLIFPNGRSIVLERQPGA 281 # # Query: 75 DAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQVG 134 # DAQGYAGLEDGVDYHWGELF AAAL+T+LSVGA+AGSS Q+SDIVRALR GASDS+SQVG # Sbjct: 282 DAQGYAGLEDGVDYHWGELFKAAALSTVLSVGAQAGSSDQDSDIVRALRSGASDSVSQVG 341 # # Query: 135 QQIVQRQLNIAPTLTIRPGVNVRVVVTRDLMLEPYGG 171 # QQ+VQ+QL++APTLT+RPG VRV+VTRDL+LEPYGG # Sbjct: 342 QQVVQQQLDMAPTLTVRPGFPVRVLVTRDLVLEPYGG 378 # # # >RSc2575 # Length = 425 # # Score = 171 bits (433), Expect = 7e-43 # Identities = 86/158 (54%), Positives = 115/158 (72%), Gaps = 3/158 (1%) # # Query: 15 MTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGT 74 # +TE VYD+ TGR LLIPQG+R++G+Y++ V +GQ RV +VW+R++ P+ S+ L+ GT # Sbjct: 257 VTEPVYDTATGRFLLIPQGSRILGKYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLAGT 316 # # Query: 75 DAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESD---IVRALRGGASDSLS 131 # D GYAGLED VDYHWG +F AALTT+L VGAE + D IV A R A DS++ # Sbjct: 317 DPAGYAGLEDDVDYHWGRIFAGAALTTLLGVGAELAAPENRQDGNRIVIAGRDSAQDSIN 376 # # Query: 132 QVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDLMLEPY 169 # QVGQ++ +R +NI PTLT RPG+ VR++V RDL+L PY # Sbjct: 377 QVGQEMTRRNMNIQPTLTERPGLPVRIIVNRDLVLRPY 414 # # # >mlr6405 # Length = 409 # # Score = 163 bits (412), Expect = 2e-40 # Identities = 80/155 (51%), Positives = 109/155 (69%) # # Query: 15 MTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGT 74 # +TENV+D+ TG +LIPQG+R+IG YD+ V FGQRR LLVW R++ P+G SI ++ P T # Sbjct: 253 VTENVHDTVTGSIVLIPQGSRLIGTYDSVVAFGQRRALLVWQRIILPDGSSIEIDNLPAT 312 # # Query: 75 DAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQVG 134 # D GYAGLED VD+H +L AL T+L VG E ESD+V+A+R ++SQ G # Sbjct: 313 DTAGYAGLEDKVDFHTWQLIKGVALATLLGVGTELSFGENESDLVKAIRESTQQNISQAG 372 # # Query: 135 QQIVQRQLNIAPTLTIRPGVNVRVVVTRDLMLEPY 169 # Q+I ++ LNI PT+ +RPG +RV+V +DL+L PY # Sbjct: 373 QRITEKNLNIQPTIIVRPGWPLRVIVHKDLVLRPY 407 # # # >CC2685 # Length = 418 # # Score = 146 bits (369), Expect = 2e-35 # Identities = 82/155 (52%), Positives = 106/155 (67%) # # Query: 15 MTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGT 74 # +TENV+DS TGR LLIPQG R+IG YD+ V FGQRR LLVW R++ P+G SI L+ P T # Sbjct: 261 VTENVFDSATGRILLIPQGARLIGSYDSVVAFGQRRALLVWKRIILPDGASIQLDNLPAT 320 # # Query: 75 DAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQVG 134 # D +G+AGL D VD+H L L+T+L VG + ESD+VRA+R S SQ G # Sbjct: 321 DTEGHAGLADQVDFHTWRLLKGVVLSTLLGVGTKLSLGDGESDLVRAIRQSTQQSASQAG 380 # # Query: 135 QQIVQRQLNIAPTLTIRPGVNVRVVVTRDLMLEPY 169 # QQIV +QL + PTL +RPG +R +V +DL+L P+ # Sbjct: 381 QQIVAKQLAVQPTLRVRPGWPLRAIVHKDLILRPW 415 # # # >AGpT71 # Length = 438 # # Score = 124 bits (310), Expect = 1e-28 # Identities = 62/156 (39%), Positives = 98/156 (62%), Gaps = 5/156 (3%) # # Query: 15 MTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGT 74 # +++NVYDS TG LLIPQGT++ G+YD+ V FGQ RVL+VW+ ++FPNG ++ + GT # Sbjct: 277 VSQNVYDSATGHLLLIPQGTKLFGRYDSKVSFGQSRVLVVWTDIIFPNGSTLQIGGMAGT 336 # # Query: 75 DAQGYAGLEDGVDYHWGELFNAAALTTILSVG-----AEAGSSGQESDIVRALRGGASDS 129 # DAQGY+G D VD +W + F +A L ++ G E+ + + A R +++ # Sbjct: 337 DAQGYSGSRDKVDRNWLQTFGSAILIAVIGTGIDMAVPESSTLATQDTASDAARRNFAET 396 # # Query: 130 LSQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDLM 165 # +V + +QR +++ PTL IRPG V+V +D++ # Sbjct: 397 FGRVADRTIQRNMDVQPTLEIRPGYKFNVLVDQDIV 432 # # # >XFa0040 # Length = 469 # # Score = 122 bits (306), Expect = 3e-28 # Identities = 62/166 (37%), Positives = 100/166 (59%), Gaps = 9/166 (5%) # # Query: 13 GVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQP 72 # G + ++VYD+ TG+ LLIPQGTR++G Y++ VG+GQ +L+ W RLVFP+G+++ + P # Sbjct: 299 GQVAQDVYDTATGKYLLIPQGTRLVGMYNSNVGYGQGAILIAWQRLVFPDGKALDISAMP 358 # # Query: 73 GTDAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQ 132 # G D GYAG D ++H+ +F +A L + ++ + + ++ + AS LSQ # Sbjct: 359 GADNAGYAGFRDQANHHYTRIFGSALLMSGVTAASSYATDRNRNNSGIYSQPTASSELSQ 418 # # Query: 133 --------VGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDL-MLEPY 169 # V Q++ + LNIAPTL IRPG +++ +DL +PY # Sbjct: 419 ALGQQLGNVTAQMISKNLNIAPTLQIRPGYRFNIIIVKDLNFTKPY 464 # # # >XF2049 # Length = 466 # # Score = 121 bits (303), Expect = 8e-28 # Identities = 62/166 (37%), Positives = 99/166 (59%), Gaps = 9/166 (5%) # # Query: 13 GVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQP 72 # G + ++VYD+ TG+ LLIPQGTR++G Y++ VG+GQ +L+ W RLVFP+G+++ + P # Sbjct: 296 GQVAQDVYDTATGKYLLIPQGTRLVGMYNSNVGYGQGAILIAWQRLVFPDGKALDISAMP 355 # # Query: 73 GTDAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQ 132 # G D GYAG D ++H+ +F +A L + ++ + ++ + AS LSQ # Sbjct: 356 GADNAGYAGFRDQANHHYTRIFGSALLMSGVTAASSYAMDRNRNNGGIYSQPTASSELSQ 415 # # Query: 133 --------VGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDL-MLEPY 169 # V Q++ + LNIAPTL IRPG +++ +DL +PY # Sbjct: 416 ALGQQLGNVTAQMISKNLNIAPTLQIRPGYRFNIIIVKDLNFTKPY 461 # # # >CC2422 # Length = 383 # # Score = 89.0 bits (219), Expect = 5e-18 # Identities = 51/140 (36%), Positives = 80/140 (56%), Gaps = 1/140 (0%) # # Query: 25 GRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGTDAQGYAGLED 84 # G ++LIP+G+++IGQY +GV GQ R +VWSR++ P G SI + PG D G GL+ # Sbjct: 235 GSTVLIPRGSKLIGQYKSGVAAGQTRAFIVWSRVLTPQGVSIDIA-SPGADRLGRGGLDG 293 # # Query: 85 GVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQVGQQIVQRQLNI 144 # + H+ F A+ L ++L+ G A S+ A+ G+ S + +QR+++I # Sbjct: 294 ETNTHFFRRFGASILLSVLNAGLNAASNNGNGGDNTAIIIGSPQQASNIASIALQREIDI 353 # # Query: 145 APTLTIRPGVNVRVVVTRDL 164 # T+T+ G +RV V RDL # Sbjct: 354 PTTITVAQGAPIRVFVARDL 373 # # # >XFa0014 # Length = 447 # # Score = 80.9 bits (198), Expect = 1e-15 # Identities = 50/153 (32%), Positives = 92/153 (59%), Gaps = 9/153 (5%) # # Query: 15 MTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGT 74 # +T +VY S G+ LL+ +G++++G+Y G+ GQ R+ ++W+R+ PNG IV PGT # Sbjct: 289 LTSDVY-SDNGQVLLLDRGSQLVGEYQGGMKQGQVRLFVLWTRVKTPNG-VIVSLNSPGT 346 # # Query: 75 DAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEA---GSSGQESDIVRALRGGASDSLS 131 # DA G +GL+ VD H+ + F AA L +++ + ++G +++ GG + # Sbjct: 347 DALGRSGLDGWVDNHFSQRFGAAILMSLVQDSVKELLRNNNGGTTNVY----GGTINGGE 402 # # Query: 132 QVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDL 164 # ++ ++I++ +NI PT+ G +++V+V RDL # Sbjct: 403 KIIEKILESTVNIPPTIVKNQGDHIQVMVARDL 435 # # # >AGpA231 # Length = 390 # # Score = 80.9 bits (198), Expect = 1e-15 # Identities = 52/143 (36%), Positives = 76/143 (52%), Gaps = 3/143 (2%) # # Query: 22 SPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGTDAQGYAG 81 # S GR +L+ +GT+V+G+Y G+ GQ R+ ++W+R P G IV P TDA G AG # Sbjct: 216 SDNGRVVLMEKGTQVVGEYRGGLQRGQERLFILWNRAKTPKG-VIVTLASPATDALGRAG 274 # # Query: 82 LEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQVGQQIVQRQ 141 # ++ VD HW E F +A L +I+ SS + V A + + + Q V++ # Sbjct: 275 VDGHVDTHWWERFGSALLLSIVGDATNYASSRLQDSDVDAQK--TTSASQQAAAIAVEQS 332 # # Query: 142 LNIAPTLTIRPGVNVRVVVTRDL 164 # +NI PTL G V + V RDL # Sbjct: 333 INIPPTLNKHQGEPVSIFVARDL 355 # # # >SMa1303 # Length = 390 # # Score = 79.0 bits (193), Expect = 5e-15 # Identities = 54/144 (37%), Positives = 78/144 (53%), Gaps = 5/144 (3%) # # Query: 22 SPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGTDAQGYAG 81 # S GR +L+ +GT+V+G+Y G+ GQ+R+ ++W R PNG IV P TDA G AG # Sbjct: 216 SDNGRVVLMEKGTQVVGEYRGGLQRGQKRLFVLWYRAKTPNG-VIVTLASPATDALGRAG 274 # # Query: 82 LEDGVDYHWGELFNAAALTTILSVGAEAGSSG-QESDIVRALRGGASDSLSQVGQQIVQR 140 # ++ VD HW E F +A L +I+ SS Q+SD+ + + Q V++ # Sbjct: 275 VDGYVDTHWWERFGSALLLSIVGDATSYASSRLQDSDVDAQ---NTTSAGQQAAAVAVEQ 331 # # Query: 141 QLNIAPTLTIRPGVNVRVVVTRDL 164 # +NI PTL G V + V RDL # Sbjct: 332 SINIPPTLNKHQGELVSIFVARDL 355 # # # >mlr9259 # Length = 410 # # Score = 76.6 bits (187), Expect = 2e-14 # Identities = 59/188 (31%), Positives = 100/188 (52%), Gaps = 32/188 (17%) # # Query: 7 IVAVFKGVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSI 66 # + + + V++E+V+ S GR +LIP G+R+IG+Y +G+ GQ RV +VW+RL+ +G S+ # Sbjct: 196 LAGMVRAVVSEDVW-SFDGRRVLIPGGSRLIGEYRSGLATGQTRVFIVWTRLLRSDGMSV 254 # # Query: 67 VLERQPGTDAQGYAGLEDGVDYHWGELFNAAALTTIL--------SVGAEAGSSG----- 113 # L GTD G +G+ VD H+ E F +A L +++ ++G + S # Sbjct: 255 QLG-STGTDELGRSGMPGEVDNHYFERFGSAILLSVVGGATQFIANLGTDQNGSNTNQTY 313 # # Query: 114 -------------QESDIVRALRG-GA---SDSLSQVGQQIVQRQLNIAPTLTIRPGVNV 156 # Q + V+ R GA S SL+++ ++ ++ +NIAPT+ + G + # Sbjct: 314 TDPQTGQTVTIQTQPNQYVQNARQIGAQQVSQSLNRIAEEALRNSINIAPTIHVDQGSRI 373 # # Query: 157 RVVVTRDL 164 # V V RDL # Sbjct: 374 MVFVRRDL 381 # # # >BMEII0034 # Length = 265 # # Score = 74.3 bits (181), Expect = 1e-13 # Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 6/154 (3%) # # Query: 14 VMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPG 73 # V+T N+Y S G+ LLI +G+ + G+YD V G R+ ++W+R+ PNG I L+ PG # Sbjct: 104 VVTRNMY-SDNGKVLLIERGSTISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLD-SPG 161 # # Query: 74 TDAQGYAGLEDGVDYH-WGELFNAAALTTILSVG--AEAGSSGQESDIVRALRGGASDSL 130 # D G AGL +D H W A L+TI ++G A G S+ + L G +S # Sbjct: 162 ADPLGGAGLPGYIDSHFWKRFGGALMLSTIETLGRYATQKVGGGGSNQIN-LNTGGGEST 220 # # Query: 131 SQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDL 164 # S + ++ +NI PTL G + + + RDL # Sbjct: 221 SNLASTALKDTINIPPTLYKNQGEEIGIYIARDL 254 # # # >jhp0036 # Length = 376 # # Score = 67.0 bits (162), Expect = 2e-11 # Identities = 44/154 (28%), Positives = 77/154 (49%), Gaps = 14/154 (9%) # # Query: 25 GRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGTDAQGYAGLED 84 # G+++LIP+G++VIG Y N G+ R+ +VWSR++ P+G +I+L G D +GY GL # Sbjct: 207 GKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTNAKGADIKGYNGLVG 266 # # Query: 85 GVDYHWGELFNAAALTTILSVGAEAG------SSGQESDIVR--------ALRGGASDSL 130 # + + + L + L+ G G + G + ++ L + + # Sbjct: 267 ELIERNFQRYGVPLLLSTLTNGLLIGITSALNNRGNKEEVTNFFGDYLLLQLMRQSGMGI 326 # # Query: 131 SQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDL 164 # +QV QI++ + IAP + IR G V + D+ # Sbjct: 327 NQVVNQILRDKSKIAPIVVIREGSRVFISPNTDI 360 # # # >HP0042 # Length = 233 # # Score = 66.2 bits (160), Expect = 3e-11 # Identities = 45/156 (28%), Positives = 79/156 (49%), Gaps = 18/156 (11%) # # Query: 25 GRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGTDAQGYAGLED 84 # G+++LIP+G++VIG Y N G+ R+ +VWSR++ P+G +I+L G D +GY GL # Sbjct: 64 GKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTNAKGADIKGYNGLVG 123 # # Query: 85 GVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASD---------------- 128 # + + + L + L+ G G + ++ R + GA++ # Sbjct: 124 ELIERNFQRYGVPLLLSTLTNGLLIGITSALNN--RGNKEGATNFFGDYLLMQLMRQSGM 181 # # Query: 129 SLSQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDL 164 # ++QV QI++ + IAP + IR G V + D+ # Sbjct: 182 GINQVVNQILRDKSKIAPIVVIREGSRVFISPNTDI 217 # # # >AGpT13 # Length = 377 # # Score = 59.3 bits (142), Expect = 4e-09 # Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 1/141 (0%) # # Query: 24 TGRSLLIPQGTRVIGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGTDAQGYAGLE 83 # T +L+ +GT V+G+ G+ G RV ++W R P+ I L P D G +GL # Sbjct: 216 TNNVVLLDRGTTVVGEIQRGLQQGDARVFVLWDRAETPDHAMISLA-SPSADELGRSGLP 274 # # Query: 84 DGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQVGQQIVQRQLN 143 # VD H+ + F+ A L +++ +A S+ S ++ Q ++ +N # Sbjct: 275 GTVDNHFWQRFSGAMLLSVVQGAFQAASTYAGSSGGGTSFNSVQNNGEQTADTALKATIN 334 # # Query: 144 IAPTLTIRPGVNVRVVVTRDL 164 # I PTL G V + V RDL # Sbjct: 335 IPPTLKKNQGDTVSIFVARDL 355 # # # >RP291 # Length = 483 # # Score = 48.9 bits (115), Expect = 5e-06 # Identities = 28/96 (29%), Positives = 51/96 (52%), Gaps = 3/96 (3%) # # Query: 12 KGVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQR-RVLLVWSRLVFPNGRSIVLER 70 # + +++ +V+ S G+ +LIP+G+++ G+Y RV ++W R+ NG +I + # Sbjct: 216 RAIISRDVF-SEKGKVILIPKGSKIFGKYATSTSSDSYGRVSIIWDRVDLTNGYTIEFD- 273 # # Query: 71 QPGTDAQGYAGLEDGVDYHWGELFNAAALTTILSVG 106 # P D G GL+ VD + E F A L + ++G # Sbjct: 274 SPAVDNLGRPGLQGRVDNKYKEQFANAVLQSGFNIG 309 # # # >jhp0476_2 # Length = 273 # # Score = 46.6 bits (109), Expect = 3e-05 # Identities = 39/179 (21%), Positives = 85/179 (46%), Gaps = 20/179 (11%) # # Query: 5 AYIVAVFKGVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFG--QRRVLLVWSRLVFPN 62 # A + + GV+ ++V++ G +L+ +GT+V G Y + G R+++V+++ + P+ # Sbjct: 54 ATLTGIVSGVVAKDVWNM-NGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPD 112 # # Query: 63 GRSIVLERQPGTDAQGYAGLEDGVDYHWGELFNAAALTTILS--------------VGAE 108 # G I L G AG++ V+ H+ + A + ++++ +G # Sbjct: 113 GVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLG 172 # # Query: 109 AGSSGQESDIVRALR---GGASDSLSQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDL 164 # G S + + AL G+ S +Q+ QI+ + +NI P+ G +++++ D+ # Sbjct: 173 KGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDI 231 # # # >HP0527_2 # Length = 273 # # Score = 46.2 bits (108), Expect = 3e-05 # Identities = 39/179 (21%), Positives = 85/179 (46%), Gaps = 20/179 (11%) # # Query: 5 AYIVAVFKGVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFG--QRRVLLVWSRLVFPN 62 # A + + GV+ ++V++ G +L+ +GT+V G Y + G R+++V+++ + P+ # Sbjct: 54 ATLTGIVSGVVAKDVWNM-NGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPD 112 # # Query: 63 GRSIVLERQPGTDAQGYAGLEDGVDYHWGELFNAAALTTILS--------------VGAE 108 # G I L G AG++ V+ H+ + A + ++++ +G # Sbjct: 113 GVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLG 172 # # Query: 109 AGSSGQESDIVRALR---GGASDSLSQVGQQIVQRQLNIAPTLTIRPGVNVRVVVTRDL 164 # G S + + AL G+ S +Q+ QI+ + +NI P+ G +++++ D+ # Sbjct: 173 KGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDI 231 # # # >RC0389 # Length = 482 # # Score = 44.3 bits (103), Expect = 1e-04 # Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%) # # Query: 12 KGVMTENVYDSPTGRSLLIPQGTRVIGQYDNGVGFGQR-RVLLVWSRLVFPNGRSIVLER 70 # + +++ +V+ S + +LIP+G+++ G+Y RV ++W R+ +G +I + # Sbjct: 215 RAIISRDVF-SEKDKVILIPKGSKIFGKYATSTSSDSYGRVSIIWDRIDLTSGYTIEFD- 272 # # Query: 71 QPGTDAQGYAGLEDGVDYHWGELFNAAALTTILSVG 106 # P D G GL+ VD + E F A L + ++G # Sbjct: 273 SPAVDNLGRPGLQGRVDNKYKEQFANAVLQSGFNIG 308 # # # >SPBC428.11 # Length = 429 # # Score = 32.7 bits (73), Expect = 0.39 # Identities = 29/102 (28%), Positives = 45/102 (43%), Gaps = 10/102 (9%) # # Query: 68 LERQPGTDAQGYAGLEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESDIVRALRGGAS 127 # LE+ P + Y GLE V + + + +LS GA+ G Q +V AL+ + # Sbjct: 311 LEKHPKVNWVSYPGLESHVSHKLAKKYLKNGYGAVLSFGAKGGPD-QSRKVVNALK--LA 367 # # Query: 128 DSLSQVGQQIVQRQLNIAPTLTIRPGV----NVRVVVTRDLM 165 # L+ VG + L IAP T + + VT+DL+ # Sbjct: 368 SQLANVGD---AKTLVIAPAYTTHLQLTDEEQISAGVTKDLI 406 # # # >PA1443 # Length = 323 # # Score = 30.4 bits (67), Expect = 2.0 # Identities = 17/69 (24%), Positives = 34/69 (48%) # # Query: 102 ILSVGAEAGSSGQESDIVRALRGGASDSLSQVGQQIVQRQLNIAPTLTIRPGVNVRVVVT 161 # +L G ++ Q+ ++ALR D +G +V+RQL + L ++PG + V + # Sbjct: 228 MLDAGFQSDHDDQDERWIKALREDVLDVQVPLGATVVRRQLKLRDILHMQPGDVIPVEMP 287 # # Query: 162 RDLMLEPYG 170 # +++ G # Sbjct: 288 EHMVMRANG 296 # # # >Cgl1293 # Length = 567 # # Score = 29.6 bits (65), Expect = 3.1 # Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%) # # Query: 91 GELFNAAALTTILSVGAEAGSSGQE----SDIVRALRGGASDSLSQVGQQIVQRQLNIAP 146 # GEL + A +T L+VG+ G+ G S ++RA+ A+D + + +Q L+IA # Sbjct: 96 GELGDVARITEALAVGSVRGARGNSGVVLSQVLRAIAQAAADGV--IDGHTIQEALSIAR 153 # # Query: 147 TLTIR 151 # +L R # Sbjct: 154 SLVDR 158 # # # >NMB0261 # Length = 259 # # Score = 29.6 bits (65), Expect = 3.7 # Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 9/65 (13%) # # Query: 96 AAALTTILSVGAEAGSSGQESDIVRALRGGASDSLSQVGQQIVQRQLNIAPTLTIRPGVN 155 # AA +LSV A+AG S R + GG + L+ VG+Q+VQ L +L + G # Sbjct: 98 AARQLAMLSVLAKAGGS-------RGMAGGQAIDLANVGKQMVQADLEQMHSL--KTGAL 148 # # Query: 156 VRVVV 160 # +R V # Sbjct: 149 IRAAV 153 # # # >BH0295 # Length = 195 # # Score = 29.3 bits (64), Expect = 3.8 # Identities = 12/30 (40%), Positives = 20/30 (66%) # # Query: 21 DSPTGRSLLIPQGTRVIGQYDNGVGFGQRR 50 # ++P G+ L+ +G +VI Y NG G G+R+ # Sbjct: 165 NTPHGQVRLVIKGGKVITMYPNGWGLGERK 194 # # # >all3984 # Length = 231 # # Score = 28.9 bits (63), Expect = 6.0 # Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 15/61 (24%) # # Query: 15 MTENVYDSPTGRSLLIPQGTRVIGQ----YDNGVGFGQRR--------VLLVWSRLVFPN 62 # + N+ D+ R++LIP GT V+GQ Y NG F Q R V V L+FP+ # Sbjct: 76 IANNIIDN--NRNVLIPAGTEVVGQLEPVYFNG-NFSQDRNDQSNVRGVRFVARELIFPS 132 # # Query: 63 G 63 # G # Sbjct: 133 G 133 # # # >APE1819 # Length = 363 # # Score = 28.1 bits (61), Expect = 8.9 # Identities = 21/66 (31%), Positives = 32/66 (47%), Gaps = 6/66 (9%) # # Query: 28 LLIPQGTRVIGQYDNGVGFGQRR---VLLVWSRLVFPNGRSIVLERQPGTDAQGYAGLED 84 # ++ P G RV+ ++ V + +RR + LV RL+ + VL R G YAGL+D # Sbjct: 31 IMFPWGFRVV---ESRVDWEERRGWVLYLVRKRLLSTPTAASVLSRLLGCRLYSYAGLKD 87 # # Query: 85 GVDYHW 90 # W # Sbjct: 88 ACSVSW 93 # # # >sll0436 # Length = 151 # # Score = 28.1 bits (61), Expect = 9.5 # Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%) # # Query: 37 IGQYDNGVGFGQRRVLLVWSRLVFPNGRSIVLERQPGTDAQGYAGLEDGVD 87 # IGQ+ +G R + + L+ P+ +S+V+ER PG + G G D # Sbjct: 39 IGQWSTAIGGRSRFTIQI--PLLKPSLKSVVVERSPGLVVWQFKGFFQGQD 87 # # Database: myva Posted date: Sep 16, 2002 2:25 PM Number of letters in database: 59,019,183 Number of sequences in database: 192,987 Lambda K H 0.319 0.139 0.400 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,695,336 Number of Sequences: 192987 Number of extensions: 811500 Number of successful extensions: 2040 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 2000 Number of HSP's gapped (non-prelim): 39 length of query: 171 length of database: 59,019,183 effective HSP length: 102 effective length of query: 69 effective length of database: 39,334,509 effective search space: 2714081121 effective search space used: 2714081121 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.1 bits) S2: 61 (28.1 bits)