R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 3089 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|4680212|gb|AAD27575.1|AF114171_17 (AF114171) hypothetical protein [Sorghum
bicolor]
Length = 214
Frame 3 hits (HSPs): ________________________
Frame 1 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
Plus Strand HSPs:
Score = 269 (94.7 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 67/114 (58%), Positives = 74/114 (64%), Frame = +3
Query: 81 RLEMGRGVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAP 260
R+ GRGVS GGGQSSL YLFG G G + A+AP+ P +PA A P
Sbjct: 93 RMGRGRGVSYGGGQSSLSYLFGGG-------G--DEPAAAPAKP----TPAAVEQRAQQP 139
Query: 261 AAAAAPAPAPAPAPAPADKQ--IPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVH 422
AAAAA AP PA A +KQ IPAG+ GS NNY RA GQNCGNFLTDRPSTKVH
Sbjct: 140 AAAAA-APTPA-ATVDGEKQKGIPAGVRGSQTNNYFRAQGQNCGNFLTDRPSTKVH 193
Score = 44 (15.5 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 8/8 (100%), Positives = 8/8 (100%), Frame = +1
Query: 424 DRPSTKVH 447
DRPSTKVH
Sbjct: 186 DRPSTKVH 193
>gi|2765837|emb|CAB09665.1| (Z96936) NAP16kDa protein [Arabidopsis thaliana]
Length = 145
Frame 3 hits (HSPs): ___________________________________
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | 145
0 50 100
Plus Strand HSPs:
Score = 252 (88.7 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 59/111 (53%), Positives = 64/111 (57%), Frame = +3
Query: 90 MGRGVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAA 269
MGRG S GGGQSSLDYLFG PA + A P+P PAP A A A
Sbjct: 1 MGRGNSCGGGQSSLDYLFGGDAPAP-----KPVPAPRPAPTESNNGPAPPVTAVTATALT 55
Query: 270 AAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVH 422
A PA +KQIPAGI + NNY RA+GQN GNFLTDRPSTKVH
Sbjct: 56 TATTSVE---PAELNKQIPAGIKTPV-NNYARAEGQNTGNFLTDRPSTKVH 102
Score = 44 (15.5 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 8/8 (100%), Positives = 8/8 (100%), Frame = +1
Query: 424 DRPSTKVH 447
DRPSTKVH
Sbjct: 95 DRPSTKVH 102
>gi|4406772|gb|AAD20083.1| (AC006836) putative nitrilase-associated protein
[Arabidopsis thaliana]
Length = 119
Frame 3 hits (HSPs): ___________________________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 119
0 50 100
Plus Strand HSPs:
Score = 252 (88.7 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 59/111 (53%), Positives = 64/111 (57%), Frame = +3
Query: 90 MGRGVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAA 269
MGRG S GGGQSSLDYLFG PA + A P+P PAP A A A
Sbjct: 1 MGRGNSCGGGQSSLDYLFGGDAPAP-----KPVPAPRPAPTESNNGPAPPVTAVTATALT 55
Query: 270 AAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVH 422
A PA +KQIPAGI + NNY RA+GQN GNFLTDRPSTKVH
Sbjct: 56 TATTSVE---PAELNKQIPAGIKTPV-NNYARAEGQNTGNFLTDRPSTKVH 102
Score = 44 (15.5 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 8/8 (100%), Positives = 8/8 (100%), Frame = +1
Query: 424 DRPSTKVH 447
DRPSTKVH
Sbjct: 95 DRPSTKVH 102
>gi|11346164|pir||T51538 nitrilase associated protein-like - Arabidopsis
thaliana >gi|9755815|emb|CAC01759.1| (AL391143) nitrilase
associated protein-like [Arabidopsis thaliana]
Length = 127
Frame 3 hits (HSPs): ________________________________________
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | 127
0 50 100
Plus Strand HSPs:
Score = 186 (65.5 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 46/109 (42%), Positives = 60/109 (55%), Frame = +3
Query: 96 RGVSAGGGQSSLDYLFGSG--VPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAA 269
RGV++GGG+SSL YLFGSG VP + A+T + + + A P
Sbjct: 5 RGVNSGGGESSLGYLFGSGESVPKPNKPNAKTGFTTTTTTT----TTTDGAGGRPKTTTT 60
Query: 270 AAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVH 422
++ AG+ GS NNY+R+DGQNCGNFLT+RPSTKVH
Sbjct: 61 TTTT-----GDKNKTEENSAGVRGS-PNNYYRSDGQNCGNFLTERPSTKVH 105
Score = 40 (14.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 7/8 (87%), Positives = 8/8 (100%), Frame = +1
Query: 424 DRPSTKVH 447
+RPSTKVH
Sbjct: 98 ERPSTKVH 105
>gi|6041799|gb|AAF02119.1|AC009755_12 (AC009755) unknown protein [Arabidopsis
thaliana] >gi|6513916|gb|AAF14820.1|AC011664_2 (AC011664) unknown
protein [Arabidopsis thaliana]
Length = 122
Frame 3 hits (HSPs): _________________________________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 122
0 50 100
Plus Strand HSPs:
Score = 175 (61.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 45/109 (41%), Positives = 57/109 (52%), Frame = +3
Query: 96 RGVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAA 275
RGV+ G +SSL YLFGSG P+S+A A T + + + P
Sbjct: 5 RGVNNGVNESSLGYLFGSGQPSSAA--AATMGTTTTTTTT---TTTDGTGGRPITTTTTT 59
Query: 276 PAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVH 422
+K+ AG+ GS NNY R++GQNCGNFLTDRPSTKVH
Sbjct: 60 VTD---------NKKTSAGVRGS-PNNYFRSEGQNCGNFLTDRPSTKVH 98
Score = 71 (25.0 bits), Expect = 8.4, P = 1.0
Identities = 15/23 (65%), Positives = 16/23 (69%), Frame = +3
Query: 105 SAGGGQSSLDYLFGSGVPASSAN 173
+A GG SSLDYLFG PA S N
Sbjct: 99 AAPGGGSSLDYLFGGPSPAGSGN 121
Score = 44 (15.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/8 (100%), Positives = 8/8 (100%), Frame = +1
Query: 424 DRPSTKVH 447
DRPSTKVH
Sbjct: 91 DRPSTKVH 98
>gi|9797761|gb|AAF98579.1|AC013427_22 (AC013427) Contains similarity to PIR7A
protein from Oryza sativa gb|Z34271 and contains an alpha/beta
hydrolase fold PF|00561. [Arabidopsis thaliana]
Length = 491
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | 491
0 150 300 450
Plus Strand HSPs:
Score = 185 (65.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 42/73 (57%), Positives = 47/73 (64%), Frame = +3
Query: 222 QSPAPAAAAAPAPAAAAAPAPA-PAPAPAPAD-----KQIPAGIPGSLKNNYHRADGQNC 383
++P PA APAP++ P A P+P A KQIPAGI S NNY RADGQN
Sbjct: 400 EAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQIPAGINKSSTNNYIRADGQNT 459
Query: 384 GNFLTDRPSTKVH 422
GNFLTDRPSTKVH
Sbjct: 460 GNFLTDRPSTKVH 472
>gi|6730644|gb|AAF27065.1|AC008262_14 (AC008262) F4N2.18 [Arabidopsis thaliana]
>gi|12325084|gb|AAG52493.1|AC018364_11 (AC018364) putative
nitrilase-associated protein; 69823-70365 [Arabidopsis thaliana]
Length = 110
Frame 3 hits (HSPs): _____________________________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 110
0 20 40 60 80 100
Plus Strand HSPs:
Score = 169 (59.5 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 46/101 (45%), Positives = 58/101 (57%), Frame = +3
Query: 144 GSGVPAS---SANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPAD 314
G GV A S+ G + AP ++PA ++A AP AA A A +
Sbjct: 2 GRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAAANA-----VDSI 56
Query: 315 KQIPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVH*SAIYQGS 446
KQ+PAG+ + NNY RA+GQN GNF+TDRPSTKVH SA GS
Sbjct: 57 KQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVH-SAPGGGS 99
Score = 114 (40.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 32/64 (50%), Positives = 36/64 (56%), Frame = +3
Query: 90 MGRGVSAGGGQSSLDYLFGSG-VPASSA-NGARTQNASAPSPPVDKQSPAPAAAAAPAPA 263
MGRGVSAGGGQSSL YLFGSG P +A N + S+ P P AAAA +
Sbjct: 1 MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAP-----PTQAAAANAVDS 55
Query: 264 AAAAPA 281
PA
Sbjct: 56 IKQVPA 61
Score = 45 (15.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 10/11 (90%), Positives = 10/11 (90%), Frame = +1
Query: 418 FI-DRPSTKVH 447
FI DRPSTKVH
Sbjct: 82 FITDRPSTKVH 92
>gi|3135759|emb|CAA70117.1| (Y08913) s18 chorion protein [Ceratitis capitata]
Length = 332
Frame 3 hits (HSPs): _________ _____ ________________
__________________________________________________
Database sequence: | | | | 332
0 150 300
Plus Strand HSPs:
Score = 127 (44.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 30/48 (62%), Positives = 34/48 (70%), Frame = +3
Query: 195 SAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPA----PAPADKQIPA 329
SAP+P V +PAPAA +APAPA +APAPAPAPA PAPA PA
Sbjct: 228 SAPAPAV-YSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAPAPAAYSAPA 275
Score = 125 (44.0 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 29/49 (59%), Positives = 33/49 (67%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPA----PAPAPAPADKQIPA 329
AP+P P +PAPA +APAPAA +APAPA PAPAPAPA PA
Sbjct: 219 APAPAPAAYSAPAPAVYSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAPA 267
Score = 111 (39.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 30/56 (53%), Positives = 34/56 (60%), Frame = +3
Query: 195 SAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPA------------PAPADKQIPA 329
SAP+P V +PAPAA +APAPA +APAPAPAPA PAPA PA
Sbjct: 228 SAPAPAV-YSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAPAPAAYSAPAPAAYSAPA 283
Score = 110 (38.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 26/48 (54%), Positives = 30/48 (62%), Frame = +3
Query: 195 SAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
S P+P +PAPAA +APAPA +APAPA APAPA PA P
Sbjct: 216 STPAP-----APAPAAYSAPAPAVYSAPAPAAYSAPAPAVYSAPAPAP 258
Score = 108 (38.0 bits), Expect = 0.00015, P = 0.00015
Identities = 27/60 (45%), Positives = 37/60 (61%), Frame = +3
Query: 138 LFGSGVPAS-SANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPA 311
++ + PA+ SA +A AP+P P +PAPAA +APAPAA +APA + A APA
Sbjct: 234 VYSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAPAPAAYSAPAPAAYSAPASSGYGASAPA 293
Score = 105 (37.0 bits), Expect = 0.0013, P = 0.0013
Identities = 28/54 (51%), Positives = 33/54 (61%), Frame = +3
Query: 156 PASSANGARTQNA-SAPSPPV---DKQSPAPAAAAAPAPAAAAAPAPAPAPAPA 305
PA + A A SAP+P V +PAPAA +APAPAA +APAPA APA
Sbjct: 230 PAPAVYSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAPAPAAYSAPAPAAYSAPA 283
Score = 105 (37.0 bits), Expect = 0.0013, P = 0.0013
Identities = 33/86 (38%), Positives = 45/86 (52%), Frame = +3
Query: 138 LFGSGVPAS-SANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAP----APAPA 299
++ + PA+ SA +A AP+P P +PAPAA +APAPAA +APA A APA
Sbjct: 234 VYSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAPAPAAYSAPAPAAYSAPASSGYGASAPA 293
Query: 300 ---PAPADKQIPAGIPGSLKNNYHRA 368
PA A + A + +Y A
Sbjct: 294 AAAPAAAHQPSAAAARSYISGSYGAA 319
Score = 70 (24.6 bits), Expect = 1.1, Sum P(2) = 0.67
Identities = 17/26 (65%), Positives = 21/26 (80%), Frame = +3
Query: 246 AAPAPAAA-AAPAPAPAP---APAPA 311
+APAPAA+ +APAPAPA APAP+
Sbjct: 164 SAPAPAASYSAPAPAPAASYSAPAPS 189
Score = 70 (24.6 bits), Expect = 1.1, Sum P(2) = 0.67
Identities = 18/28 (64%), Positives = 24/28 (85%), Frame = +3
Query: 225 SPAPAAA-AAPAPAAAAA-PAPAPAPAPA 305
+PAPAA+ +APAPA AA+ APAP+ AP+
Sbjct: 165 APAPAASYSAPAPAPAASYSAPAPS-APS 192
Score = 52 (18.3 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 21/52 (40%), Positives = 24/52 (46%), Frame = +3
Query: 51 LQQQGLVTPNRLEMGRG-VSAGGGQSSLDYLFGSGVPASSANGARTQNASAPS 206
LQ Q + G G SAG G SS Y SG S+NG +SAPS
Sbjct: 47 LQVQTIAAAGGSSAGYGGSSAGYGASSGSYGASSGGYGGSSNGYGA--SSAPS 97
>gi|7503652|pir||T22341 hypothetical protein F47B8.5 - Caenorhabditis elegans
>gi|3877270|emb|CAB01192.1| (Z77662) predicted using
Genefinder~contains similarity to Pfam domain: PF01482 (Domain of
unknown function), Score=191.5, E-value=4.4e-54, N=1
[Caenorhabditis elegans]
Length = 581
Frame 3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 581
0 150 300 450
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 38/89 (42%), Positives = 47/89 (52%), Frame = +3
Query: 75 PNRLEMGRGVSAGGGQSSLDYLFGSGVPASSANGAR--TQNASAPSPPVDKQSPAPAAAA 248
P + AGG ++ G PA AR + +AP+ P + +PAPA A
Sbjct: 435 PEAAPVAPSADAGGYAAAAAPAGGGSYPAKKRRVARDYAEGEAAPAAPAEP-APAPAPAP 493
Query: 249 APAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
APAP AA AP PAPAPAPAPA + PA P
Sbjct: 494 APAPEAAPAPEPAPAPAPAPAPEAAPAAAP 523
Score = 132 (46.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 36/72 (50%), Positives = 40/72 (55%), Frame = +3
Query: 132 DYLFGSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAP--APA- 299
DY G PA+ A A A AP+P P +P PA A APAPA AAPA AP APA
Sbjct: 471 DYAEGEAAPAAPAEPAPAP-APAPAPAPEAAPAPEPAPAPAPAPAPEAAPAAAPDAAPAE 529
Query: 300 PAPADKQIPAGIP 338
PAP + PA P
Sbjct: 530 PAPVPEVAPAPAP 542
Score = 100 (35.2 bits), Expect = 0.028, P = 0.027
Identities = 28/56 (50%), Positives = 33/56 (58%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPA--P-AAAAAPAPAAAAAPAPAPAPAPAPAD 314
PA A A + A AP+P P + +PA P AA A PAP APAPAPAPA +D
Sbjct: 495 PAPEAAPA-PEPAPAPAPAPAPEAAPAAAPDAAPAEPAPVPEVAPAPAPAPAAPESD 550
Score = 96 (33.8 bits), Expect = 0.11, P = 0.10
Identities = 28/66 (42%), Positives = 29/66 (43%), Frame = +3
Query: 135 YLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPAD 314
Y G G S G A+ PS P PA AA A P PA PAPAPAP AP
Sbjct: 388 YSSGGGGGGYSGGGGGGGEAAPPSSP-----PADAAPAPP-PAPEPVPAPAPAPEAAPVA 441
Query: 315 KQIPAG 332
AG
Sbjct: 442 PSADAG 447
Score = 93 (32.7 bits), Expect = 0.28, P = 0.25
Identities = 27/69 (39%), Positives = 32/69 (46%), Frame = +3
Query: 105 SAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAP 284
S+GGG G G A+ + A AP PP + PAPA A AP A +A A
Sbjct: 389 SSGGGGGGYSGGGGGGGEAAPPSSPPADAAPAP-PPAPEPVPAPAPAPEAAPVAPSADAG 447
Query: 285 APAPAPAPA 311
A A APA
Sbjct: 448 GYAAAAAPA 456
>gi|7800652|gb|AAF70097.1|AF255907_1 (AF255907) PspA [Streptococcus pneumoniae]
Length = 254
Frame 3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | || 254
0 50 100 150 200 250
Plus Strand HSPs:
Score = 150 (52.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/74 (45%), Positives = 40/74 (54%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAG 332
P + A T A AP+P P PAPA APAP A AP PAPAP PAPA K PA
Sbjct: 180 PKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAP 239
Query: 333 IPGSLKNNYHRADG 374
P + K + + +G
Sbjct: 240 KPETPKTGWKQENG 253
Score = 134 (47.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 27/47 (57%), Positives = 30/47 (63%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 183 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 229
Score = 126 (44.4 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 174 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 223
Score = 126 (44.4 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 136 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 194
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 195 PAPKPAPAPKPAPAPKP 211
>gi|10945166|emb|CAC14218.1| (AJ277640) TapA protein [Acidithiobacillus
ferrooxidans]
Length = 875
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | 875
0 150 300 450 600 750
Plus Strand HSPs:
Score = 159 (56.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 35/56 (62%), Positives = 38/56 (67%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPG-SLKN 353
A AP+P P +PAPA A APAPA A APAPAPAPAPAPA PA PG +L N
Sbjct: 618 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPGVTLSN 673
Score = 154 (54.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 36/65 (55%), Positives = 40/65 (61%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQ 320
G+ PA + A A AP+P P +PAPA A APAPA A APAPAPAPAPAPA
Sbjct: 581 GTPTPAPAPAPAPAP-APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 639
Query: 321 IPAGIP 338
PA P
Sbjct: 640 APAPAP 645
Score = 154 (54.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 36/67 (53%), Positives = 40/67 (59%), Frame = +3
Query: 144 GSGVPASS-ANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADK 317
G+ PA + A A AP+P P +PAPA A APAPA A APAPAPAPAPAPA
Sbjct: 581 GTPTPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPA 640
Query: 318 QIPAGIP 338
PA P
Sbjct: 641 PAPAPAP 647
Score = 152 (53.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/64 (54%), Positives = 39/64 (60%), Frame = +3
Query: 147 SGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQI 323
+G P + A A AP+P P +PAPA A APAPA A APAPAPAPAPAPA
Sbjct: 580 AGTPTPAPAPAPAP-APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPA 638
Query: 324 PAGIP 338
PA P
Sbjct: 639 PAPAP 643
Score = 151 (53.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/50 (64%), Positives = 34/50 (68%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA A APAPA A APAPAPAPAPAPA PA P
Sbjct: 600 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 649
Score = 151 (53.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/50 (64%), Positives = 34/50 (68%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA A APAPA A APAPAPAPAPAPA PA P
Sbjct: 602 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 651
Score = 151 (53.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/50 (64%), Positives = 34/50 (68%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA A APAPA A APAPAPAPAPAPA PA P
Sbjct: 604 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 653
Score = 151 (53.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/50 (64%), Positives = 34/50 (68%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA A APAPA A APAPAPAPAPAPA PA P
Sbjct: 606 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 655
Score = 151 (53.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/50 (64%), Positives = 34/50 (68%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA A APAPA A APAPAPAPAPAPA PA P
Sbjct: 608 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 657
Score = 151 (53.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/50 (64%), Positives = 34/50 (68%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA A APAPA A APAPAPAPAPAPA PA P
Sbjct: 610 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 659
Score = 151 (53.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/50 (64%), Positives = 34/50 (68%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA A APAPA A APAPAPAPAPAPA PA P
Sbjct: 612 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 661
Score = 144 (50.7 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 37/78 (47%), Positives = 45/78 (57%), Frame = +3
Query: 105 SAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAP 284
+ G Q+ +Y+ S + SA A + A A +P +PAPA A APAPA A APAP
Sbjct: 551 TVSGMQALANYV--SPQMSYSATDATLKMAVAGTP-TPAPAPAPAPAPAPAPAPAPAPAP 607
Query: 285 APAPAPAPADKQIPAGIP 338
APAPAPAPA PA P
Sbjct: 608 APAPAPAPAPAPAPAPAP 625
Score = 94 (33.1 bits), Expect = 0.35, P = 0.29
Identities = 22/40 (55%), Positives = 25/40 (62%), Frame = +3
Query: 192 ASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPA 311
A AP+P +PAPA A APAPA A APAP + APA
Sbjct: 638 APAPAP-APAPAPAPAPAPAPAPAPAPAPAPGVTLSNAPA 676
>gi|7800650|gb|AAF70096.1|AF255906_1 (AF255906) PspA [Streptococcus pneumoniae]
Length = 243
Frame 3 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 243
0 50 100 150 200
Plus Strand HSPs:
Score = 143 (50.3 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 29/59 (49%), Positives = 36/59 (61%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADG 374
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P + K + + +G
Sbjct: 184 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPETPKTGWKQENG 242
Score = 126 (44.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 175 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 224
Score = 126 (44.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 137 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 195
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 196 PAPKPAPAPKPAPAPKP 212
>gi|7800640|gb|AAF70091.1|AF255901_1 (AF255901) PspA [Streptococcus pneumoniae]
Length = 236
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | 236
0 50 100 150 200
Plus Strand HSPs:
Score = 142 (50.0 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 34/73 (46%), Positives = 39/73 (53%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAG 332
P A + A AP P P K PAPA APAP A AP PAPAP PAPA K PA
Sbjct: 164 PTPEAPAPAPKPAPAPKPAPAPK--PAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAP 221
Query: 333 IPGSLKNNYHRADG 374
P + K + + +G
Sbjct: 222 KPETPKTGWKQENG 235
Score = 134 (47.2 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 27/47 (57%), Positives = 30/47 (63%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 159 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 205
Score = 132 (46.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/51 (56%), Positives = 30/51 (58%), Frame = +3
Query: 192 ASAPSP--PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 161 APAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 211
Score = 126 (44.4 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 150 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 199
Score = 126 (44.4 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 112 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 170
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 171 PAPKPAPAPKPAPAPKP 187
>gi|7715587|gb|AAF68105.1|AF255552_1 (AF255552) PspA [Streptococcus pneumoniae]
Length = 249
Frame 3 hits (HSPs): ________________________
__________________________________________________
Database sequence: | | | | | | 249
0 50 100 150 200
Plus Strand HSPs:
Score = 142 (50.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/75 (45%), Positives = 40/75 (53%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPA-PADKQIPA 329
PA + A A AP P P PAPA APAP A APAPAPAP P PA+K PA
Sbjct: 174 PAPAPAPAPAPEAPAPKPAPAPAPKPAPAPKPAPAPKPAPAPAPAPAPKPEKPAEKLAPA 233
Query: 330 GIPGSLKNNYHRADG 374
P + K + + +G
Sbjct: 234 PKPETPKTGWKQENG 248
Score = 136 (47.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 35/78 (44%), Positives = 46/78 (58%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANG-ARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAA-PAP 284
G ++++ F G+ ++A A + A A VD+ ++PAPA A APAP A A PAP
Sbjct: 134 GNNNVEAYFKEGLEKTTAEKKAELEKAEADLKKAVDEPETPAPAPAPAPAPEAPAPKPAP 193
Query: 285 APAPAPAPADKQIPAGIP 338
APAP PAPA K PA P
Sbjct: 194 APAPKPAPAPKPAPAPKP 211
>gi|1480863|gb|AAB05810.1| (U63332) super cysteine rich protein; SCRP [Homo
sapiens]
Length = 46
Frame -2 hits (HSPs): _____________________________________
__________________________________________________
Database sequence: | | | | 46
0 20 40
Minus Strand HSPs:
Score = 139 (48.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 19/30 (63%), Positives = 20/30 (66%), Frame = -2
Query: 311 SWCWCWCWCRCWCCCCCRCRCCCCCWCWTL 222
S C C C C C CCCCC C CCCCC+C L
Sbjct: 9 SRCCCCCCCCCCCCCCCCCCCCCCCFCCCL 38
Score = 112 (39.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 14/18 (77%), Positives = 14/18 (77%), Frame = -2
Query: 284 RCWCCCCCRCRCCCCCWC 231
RC CCCCC C CCCCC C
Sbjct: 10 RCCCCCCCCCCCCCCCCC 27
Score = 109 (38.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 14/21 (66%), Positives = 14/21 (66%), Frame = -2
Query: 305 CWCWCWCRCWCCCCCRCRCCC 243
C C C C C CCCCC C CCC
Sbjct: 17 CCCCCCCCCCCCCCCCCFCCC 37
Score = 97 (34.1 bits), Expect = 0.00039, P = 0.00039
Identities = 14/21 (66%), Positives = 14/21 (66%), Frame = -2
Query: 293 CWCRCWCCCCCRCRCCCCCWC 231
C R CCCCC C CCCCC C
Sbjct: 5 CPDRSRCCCCCCC-CCCCCCC 24
>gi|7800642|gb|AAF70092.1|AF255902_1 (AF255902) PspA [Streptococcus pneumoniae]
Length = 233
Frame 3 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | | 233
0 50 100 150 200
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/60 (50%), Positives = 35/60 (58%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADG 374
AP+P P PAPA APAP A AP PAPAP PAPA K PA P + K + + +G
Sbjct: 173 APAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPETPKTGWKQENG 232
Score = 134 (47.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 27/47 (57%), Positives = 30/47 (63%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 138 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 184
Score = 132 (46.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/51 (56%), Positives = 30/51 (58%), Frame = +3
Query: 192 ASAPSP--PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 140 APAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 190
Score = 131 (46.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 28/48 (58%), Positives = 29/48 (60%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P P PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 161 APAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 208
Score = 126 (44.4 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 129 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 178
Score = 126 (44.4 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 91 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 149
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 150 PAPKPAPAPKPAPAPKP 166
>gi|7800646|gb|AAF70094.1|AF255904_1 (AF255904) PspA [Streptococcus pneumoniae]
Length = 247
Frame 3 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | | 247
0 50 100 150 200
Plus Strand HSPs:
Score = 141 (49.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/63 (49%), Positives = 36/63 (57%), Frame = +3
Query: 192 ASAPSP--PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHR 365
A AP+P P PAPA APAP A AP PAPAP PAPA K PA P + K + +
Sbjct: 184 APAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPETPKTGWKQ 243
Query: 366 ADG 374
+G
Sbjct: 244 ENG 246
Score = 134 (47.2 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 27/47 (57%), Positives = 30/47 (63%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 182 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 228
Score = 126 (44.4 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 173 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 222
Score = 126 (44.4 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 135 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 193
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 194 PAPKPAPAPKPAPAPKP 210
Score = 125 (44.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 28/54 (51%), Positives = 31/54 (57%), Frame = +3
Query: 156 PASSANGARTQNASAPSP---PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP 308
P + A T A AP+P P K +PAP A AP PA A PAPAP PAPAP
Sbjct: 179 PKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAP 232
>gi|6752401|gb|AAF27711.1|AF071815_1 (AF071815) PspA [Streptococcus pneumoniae]
Length = 408
Frame 3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 408
0 150 300
Plus Strand HSPs:
Score = 146 (51.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 37/79 (46%), Positives = 48/79 (60%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANG-ARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAPAPA 287
G ++++ F G+ ++A A + A A VD+ ++PAPA A APAPA A APAPA
Sbjct: 288 GNNNVEAYFKEGLEKTTAEKKAELEKAEADLKKAVDEPETPAPAPAPAPAPAPAPAPAPA 347
Query: 288 PAPAP--APADKQIPAGIP 338
PAPAP APA K PA P
Sbjct: 348 PAPAPKPAPAPKPAPAPAP 366
Score = 145 (51.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/50 (62%), Positives = 33/50 (66%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA A APAP A AP PAPAPAPAPA K PA P
Sbjct: 329 APAPAPAPAPAPAPAPAPAPAPAPKPAPAPKPAPAPAPAPAPKPAPAPKP 378
Score = 142 (50.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 30/50 (60%), Positives = 32/50 (64%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P +PAPA APAP A APAPAPAP PAPA K PA P
Sbjct: 335 APAPAPAPAPAPAPAPAPKPAPAPKPAPAPAPAPAPKPAPAPKPAPAPAP 384
Score = 132 (46.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 28/46 (60%), Positives = 30/46 (65%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIP 326
A AP+P P K +PAP A APAPA A PAPAP PAPAPA P
Sbjct: 343 APAPAPAPAPKPAPAPKPAPAPAPAPAPKPAPAPKPAPAPAPAPKP 388
Score = 125 (44.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/55 (54%), Positives = 34/55 (61%), Frame = +3
Query: 192 ASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP---ADKQIPAGIPGSLK 350
A P+P K +PAPA A AP PA A PAPAPAPAP P A+K PA P + K
Sbjct: 351 APKPAP-APKPAPAPAPAPAPKPAPAPKPAPAPAPAPKPEKPAEKPAPAPKPETPK 405
>gi|7800644|gb|AAF70093.1|AF255903_1 (AF255903) PspA [Streptococcus pneumoniae]
Length = 243
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | 243
0 50 100 150 200
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/60 (50%), Positives = 35/60 (58%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADG 374
AP+P P PAPA APAP A AP PAPAP PAPA K PA P + K + + +G
Sbjct: 183 APAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPETPKTGWKQENG 242
Score = 134 (47.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 27/47 (57%), Positives = 30/47 (63%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 160 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 206
Score = 132 (46.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/51 (56%), Positives = 30/51 (58%), Frame = +3
Query: 192 ASAPSP--PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 162 APAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 212
Score = 126 (44.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 151 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 200
Score = 126 (44.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 113 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 171
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 172 PAPKPAPAPKPAPAPKP 188
>gi|7800648|gb|AAF70095.1|AF255905_1 (AF255905) PspA [Streptococcus pneumoniae]
Length = 244
Frame 3 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | | 244
0 50 100 150 200
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/60 (50%), Positives = 35/60 (58%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADG 374
AP+P P PAPA APAP A AP PAPAP PAPA K PA P + K + + +G
Sbjct: 184 APAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPETPKTGWKQENG 243
Score = 134 (47.2 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 27/47 (57%), Positives = 30/47 (63%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 161 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 207
Score = 132 (46.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/51 (56%), Positives = 30/51 (58%), Frame = +3
Query: 192 ASAPSP--PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 163 APAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 213
Score = 126 (44.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 152 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 201
Score = 126 (44.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 114 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 172
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 173 PAPKPAPAPKPAPAPKP 189
>gi|7800638|gb|AAF70090.1|AF255900_1 (AF255900) PspA [Streptococcus pneumoniae]
Length = 249
Frame 3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | | | 249
0 50 100 150 200
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 30/60 (50%), Positives = 35/60 (58%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADG 374
AP+P P PAPA APAP A AP PAPAP PAPA K PA P + K + + +G
Sbjct: 189 APAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPETPKTGWKQENG 248
Score = 134 (47.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 27/47 (57%), Positives = 30/47 (63%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 160 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 206
Score = 132 (46.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 29/51 (56%), Positives = 30/51 (58%), Frame = +3
Query: 192 ASAPSP--PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 162 APAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 212
Score = 126 (44.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 151 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 200
Score = 126 (44.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 113 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 171
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 172 PAPKPAPAPKPAPAPKP 188
>gi|6760447|gb|AAF28355.1|AF222537_1 (AF222537) myrosinase-binding protein-like
protein [Arabidopsis thaliana]
Length = 654
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 654
0 150 300 450 600
Plus Strand HSPs:
Score = 148 (52.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 40/101 (39%), Positives = 44/101 (43%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQ 320
G A A GA AP+P P +P P A AP PA + APAP+PAPAPAPA
Sbjct: 276 GRSGDAIDALGAHFAPLPAPTPAPAPAPAPVPVPAPAPVPAPSPAPAPSPAPAPAPAPAP 335
Query: 321 IPAGIPGSLKNNYHRADGQNCGNFLTDRPSTKVH*SAIYQG 443
P P N A G N G D V I QG
Sbjct: 336 APTPAPAPAPPNKVEALGGNGGTIFDDGAFDHVRKVYIGQG 376
>gi|6752391|gb|AAF27706.1|AF071810_1 (AF071810) PspA [Streptococcus pneumoniae]
Length = 426
Frame 3 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | 426
0 150 300
Plus Strand HSPs:
Score = 145 (51.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 34/67 (50%), Positives = 40/67 (59%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP-----ADKQIPAGIPGSLKN 353
A AP P P K +PAP A APAPA A PAPAPAPAPAP A+K PA P + K
Sbjct: 353 APAPKPAPAPKPAPAPKPAPAPAPAPAPKPAPAPAPAPAPKPEKPAEKPAPAPKPETPKT 412
Query: 354 NYHRADG 374
+ + +G
Sbjct: 413 GWKQENG 419
Score = 140 (49.3 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 33/61 (54%), Positives = 35/61 (57%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAG 332
P + A + A AP P P K PAPA APAP A AP PAPAPAPAPA K PA
Sbjct: 329 PEAPAPAPAPKPAPAPKPAPAPK--PAPAPKPAPAPKPAPAPKPAPAPAPAPAPKPAPAP 386
Query: 333 IP 338
P
Sbjct: 387 AP 388
Score = 138 (48.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/61 (52%), Positives = 34/61 (55%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGI 335
PA + A T A AP+P PAPA APAP A AP PAPAP PAPA K PA
Sbjct: 319 PAPAPAPAPTPEAPAPAPA---PKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPA 375
Query: 336 P 338
P
Sbjct: 376 P 376
Score = 137 (48.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 28/49 (57%), Positives = 31/49 (63%), Frame = +3
Query: 192 ASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P + +PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 322 APAPAPTPEAPAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 370
Score = 137 (48.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 35/78 (44%), Positives = 46/78 (58%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANG-ARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAA-APAP 284
G ++++ F G+ ++A A + A A VD+ ++PAPA A APAPA APAP
Sbjct: 275 GNNNVEAYFKEGLEKTTAEKKAELEKAEADLKKAVDEPETPAPAPAPAPAPAPTPEAPAP 334
Query: 285 APAPAPAPADKQIPAGIP 338
APAP PAPA K PA P
Sbjct: 335 APAPKPAPAPKPAPAPKP 352
Score = 124 (43.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/49 (57%), Positives = 30/49 (61%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA-APAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P P +P P A A APAP A AP PAPAP PAPA K PA P
Sbjct: 316 APAPAPAPAPAPTPEAPAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 364
>gi|7506829|pir||T24272 hypothetical protein T01B7.8 - Caenorhabditis elegans
>gi|3879236|emb|CAA91301.1| (Z66499) T01B7.8 [Caenorhabditis
elegans]
Length = 164
Frame -2 hits (HSPs): _________________________________
Frame -3 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | 164
0 50 100 150
Minus Strand HSPs:
Score = 113 (39.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 33/88 (37%), Positives = 40/88 (45%), Frame = -2
Query: 404 PISE-KVATV-LPISAMVIVFETSRNSSWNLL----ISWCWCWCWCRCWC--------CC 267
P+S ++ATV +S +T NSS + C C C C C C CC
Sbjct: 27 PVSSTELATVGTDVSTASTAIDTLGNSSSRVKRQGGCGCCGCGCGC-CGCGGGGGGCGCC 85
Query: 266 CCRCRCCCCCW-CWTLLINRW*RSTCILSASTIC 168
CCR RCCCCC C T R+ C T C
Sbjct: 86 CCRPRCCCCCRRCCTCC-----RTCCCTRCCTCC 114
Score = 95 (33.4 bits), Expect = 0.013, P = 0.013
Identities = 17/31 (54%), Positives = 17/31 (54%), Frame = -2
Query: 299 CWCWCR--CWCC--CCCR--CRCC--CCCWC 231
C C CR C CC CCC C CC CCC C
Sbjct: 91 CCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 121
Score = 85 (29.9 bits), Expect = 0.34, P = 0.29
Identities = 14/26 (53%), Positives = 14/26 (53%), Frame = -2
Query: 299 CWCWCRCWCC--CCCRCRCCC-CCWC 231
C C C CC CCC C C C CC C
Sbjct: 105 CCCTRCCTCCRPCCCGCGCGCGCCGC 130
Score = 75 (26.4 bits), Expect = 7.2, P = 1.0
Identities = 12/24 (50%), Positives = 12/24 (50%), Frame = -2
Query: 305 CWCWCWCRCW--CCCCCRCRCCCC 240
C C C C CCC C C C CC
Sbjct: 105 CCCTRCCTCCRPCCCGCGCGCGCC 128
Score = 36 (12.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 4/5 (80%), Positives = 5/5 (100%), Frame = -3
Query: 67 KPCCC 53
+PCCC
Sbjct: 115 RPCCC 119
>gi|6752379|gb|AAF27700.1|AF071804_1 (AF071804) PspA [Streptococcus pneumoniae]
Length = 395
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 395
0 150 300
Plus Strand HSPs:
Score = 144 (50.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 34/61 (55%), Positives = 36/61 (59%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAG 332
PA + A T A AP+P P K PAPA APAP A AP PAPAP PAPA K PA
Sbjct: 318 PAPAPAPAPTPEAPAPAPAPAPK--PAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAP 375
Query: 333 IP 338
P
Sbjct: 376 AP 377
Score = 138 (48.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/61 (49%), Positives = 33/61 (54%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGI 335
P + A A AP+P +PAPA APAP A AP PAPAP PAPA K PA
Sbjct: 311 PETPAPAPAPAPAPAPTPEAPAPAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPK 370
Query: 336 P 338
P
Sbjct: 371 P 371
Score = 130 (45.8 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 29/58 (50%), Positives = 31/58 (53%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIP 326
PA + A AP P P K +PAP A AP PA A PAPAP PAPAPA P
Sbjct: 324 PAPTPEAPAPAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPAPAPKP 381
Score = 127 (44.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/62 (53%), Positives = 37/62 (59%), Frame = +3
Query: 168 ANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAA---AAAPAPAPAPAPAPADKQIPAG 332
A A + A A VD+ ++PAPA A APAPA A APAPAPAP PAPA K PA
Sbjct: 292 AKKAELEKAEADLKKAVDEPETPAPAPAPAPAPAPTPEAPAPAPAPAPKPAPAPKPAPAP 351
Query: 333 IP 338
P
Sbjct: 352 KP 353
Score = 120 (42.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/64 (48%), Positives = 36/64 (56%), Frame = +3
Query: 156 PASS-ANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP---ADKQI 323
PA + A + A P+P K +PAP A AP PA A PAPAPAPAP P A+K
Sbjct: 331 PAPAPAPAPKPAPAPKPAP-APKPAPAPKPAPAPKPAPAPKPAPAPAPAPKPEKPAEKPA 389
Query: 324 PAGIP 338
PA P
Sbjct: 390 PAPKP 394
>gi|6752389|gb|AAF27705.1|AF071809_1 (AF071809) PspA [Streptococcus pneumoniae]
Length = 394
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | 394
0 150 300
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 30/61 (49%), Positives = 33/61 (54%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGI 335
P + A A AP+P +PAPA APAP A AP PAPAP PAPA K PA
Sbjct: 311 PETPAPAPAPAPAPAPTPEAPAPAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPA 370
Query: 336 P 338
P
Sbjct: 371 P 371
Score = 139 (48.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 31/58 (53%), Positives = 34/58 (58%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIP 326
PA + A T A AP+P P K +PAP A AP PA A PAPAP PAPAPA P
Sbjct: 318 PAPAPAPAPTPEAPAPAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPAPAPKP 375
Score = 127 (44.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/62 (53%), Positives = 37/62 (59%), Frame = +3
Query: 168 ANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAA---AAAPAPAPAPAPAPADKQIPAG 332
A A + A A VD+ ++PAPA A APAPA A APAPAPAP PAPA K PA
Sbjct: 292 AKKAELEKAEADLKKAVDEPETPAPAPAPAPAPAPTPEAPAPAPAPAPKPAPAPKPAPAP 351
Query: 333 IP 338
P
Sbjct: 352 KP 353
Score = 122 (42.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 31/67 (46%), Positives = 35/67 (52%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP---ADKQIP 326
P A A P+P K +PAP A AP PA A PAPAPAPAP P A+K P
Sbjct: 326 PTPEAPAPAPAPAPKPAP-APKPAPAPKPAPAPKPAPAPKPAPAPAPAPKPEKPAEKPAP 384
Query: 327 AGIPGSLK 350
A P + K
Sbjct: 385 APKPETPK 392
>gi|6752397|gb|AAF27709.1|AF071813_1 (AF071813) PspA [Streptococcus pneumoniae]
Length = 395
Frame 3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | 395
0 150 300
Plus Strand HSPs:
Score = 140 (49.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 35/83 (42%), Positives = 44/83 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANG-ARTQNASA--------PSPPVDKQSPAPAAAAAPAPAAA 269
G ++++ F G+ ++A A + A A P P +PAPA A APAP A
Sbjct: 285 GNNNVEAYFKEGLEKTTAEKKAELEKAEADLKKAVDEPETPAPAPAPAPAPAPAPAPKPA 344
Query: 270 AAPAPAPAPAPAPADKQIPAGIP 338
AP PAPAPAPAPA K PA P
Sbjct: 345 PAPKPAPAPAPAPAPKPAPAPKP 367
Score = 139 (48.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 29/48 (60%), Positives = 31/48 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P P +PAPA APAP A APAPAPAP PAPA K PA P
Sbjct: 326 APAPAPAPAPAPAPAPKPAPAPKPAPAPAPAPAPKPAPAPKPAPAPAP 373
Score = 136 (47.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP---ADKQIPAGIPGSLK 350
A AP P P K +PAPA A AP PA A PAPAPAPAP P A+K PA P + K
Sbjct: 338 APAPKPAPAPKPAPAPAPAPAPKPAPAPKPAPAPAPAPKPEKPAEKPAPAPKPETPK 394
Score = 132 (46.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 28/46 (60%), Positives = 30/46 (65%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIP 326
A AP+P P K +PAP A APAPA A PAPAP PAPAPA P
Sbjct: 332 APAPAPAPAPKPAPAPKPAPAPAPAPAPKPAPAPKPAPAPAPAPKP 377
Score = 125 (44.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 30/55 (54%), Positives = 34/55 (61%), Frame = +3
Query: 192 ASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP---ADKQIPAGIPGSLK 350
A P+P K +PAPA A AP PA A PAPAPAPAP P A+K PA P + K
Sbjct: 340 APKPAP-APKPAPAPAPAPAPKPAPAPKPAPAPAPAPKPEKPAEKPAPAPKPETPK 394
>gi|7495472|pir||T18975 hypothetical protein C06A1.6 - Caenorhabditis elegans
>gi|3874010|emb|CAA90055.1| (Z49886) cDNA EST yk309a8.3 comes from
this gene~cDNA EST yk309a8.5 comes from this gene [Caenorhabditis
elegans]
Length = 152
Frame -2 hits (HSPs): _________________________________
Frame -3 hits (HSPs): ___
__________________________________________________
Database sequence: | | | || 152
0 50 100 150
Minus Strand HSPs:
Score = 113 (39.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 22/49 (44%), Positives = 23/49 (46%), Frame = -2
Query: 305 CWCWCWCRCWCCCCCRCRCCCCCWCWTLLINRW*RSTCILSASTICTAG 159
C C C CR CCCCCR +CCC C C T R TC C G
Sbjct: 69 CGCCC-CRPRCCCCCRPKCCCTC-CRTCCCTRC--CTCCRPCCCGCGCG 113
Score = 108 (38.0 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 33/84 (39%), Positives = 40/84 (47%), Frame = -2
Query: 401 ISEKVATVLPISAM---VIVFETSRNSSWNLLISWCWCWCWCRCW-----C-CCCCRCRC 249
IS+ + VLP+S +I ETS S + + C C C C C CCCCR RC
Sbjct: 20 ISQVESGVLPVSTTEISIISSETSIIGSSRVKRNGGCCGC-CGCGGGGGGCGCCCCRPRC 78
Query: 248 CCCC---WCWTLLINRW*RSTCILSASTIC 168
CCCC C T R+ C T C
Sbjct: 79 CCCCRPKCCCTCC-----RTCCCTRCCTCC 103
Score = 107 (37.7 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 27/63 (42%), Positives = 33/63 (52%), Frame = -2
Query: 401 ISEKVATVLPISAM---VIVFETSRNSSWNLLISWCWCWCWCRCW-----C-CCCCRCRC 249
IS+ + VLP+S +I ETS S + + C C C C C CCCCR RC
Sbjct: 20 ISQVESGVLPVSTTEISIISSETSIIGSSRVKRNGGCCGC-CGCGGGGGGCGCCCCRPRC 78
Query: 248 CCCC 237
CCCC
Sbjct: 79 CCCC 82
Score = 85 (29.9 bits), Expect = 0.25, P = 0.22
Identities = 14/26 (53%), Positives = 14/26 (53%), Frame = -2
Query: 299 CWCWCRCWCC--CCCRCRCCC-CCWC 231
C C C CC CCC C C C CC C
Sbjct: 94 CCCTRCCTCCRPCCCGCGCGCGCCGC 119
Score = 75 (26.4 bits), Expect = 5.8, P = 1.0
Identities = 12/24 (50%), Positives = 12/24 (50%), Frame = -2
Query: 305 CWCWCWCRCW--CCCCCRCRCCCC 240
C C C C CCC C C C CC
Sbjct: 94 CCCTRCCTCCRPCCCGCGCGCGCC 117
Score = 36 (12.7 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 4/5 (80%), Positives = 5/5 (100%), Frame = -3
Query: 67 KPCCC 53
+PCCC
Sbjct: 104 RPCCC 108
>gi|5002299|gb|AAD37406.1|AF148223_1 (AF148223) merozoite surface protein 2
[Plasmodium falciparum]
Length = 179
Frame -3 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | | 179
0 50 100 150
Minus Strand HSPs:
Score = 132 (46.5 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 26/47 (55%), Positives = 37/47 (78%), Frame = -3
Query: 331 PAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTGGEGALA 191
P G SAG+GAG+GAG+GA A+AG+GA A+AG+G +++ G GA+A
Sbjct: 12 PTGAVASAGSGAGSGAGSGAVASAGSGAVASAGSG-AVASAGSGAVA 57
Score = 107 (37.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/52 (46%), Positives = 34/52 (65%), Frame = -3
Query: 331 PAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLS-------TGGEGA 197
P G SAG+GAG+GAG+GA A+AG+GA A+AG+G S +G + +
Sbjct: 12 PTGAVASAGSGAGSGAGSGAVASAGSGAVASAGSGAVASAGSGAVASGSQSS 63
Score = 95 (33.4 bits), Expect = 0.017, P = 0.017
Identities = 37/108 (34%), Positives = 48/108 (44%), Frame = -3
Query: 331 PAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTG------------------- 209
P G SAG+GAG+GAG+GA A+AG+GA A+AG+G S G
Sbjct: 12 PTGAVASAGSGAGSGAGSGAVASAGSGAVASAGSGAVASAGSGAVASGSQSSTNSASTST 71
Query: 208 ---GEGALAF*VRA--PFALLAGTPLPKR*SKEL-CPPPALTPRPISS 83
GE A P A + +P P + E P P +T SS
Sbjct: 72 TNNGESQTTTPTAADTPTATKSNSPSPPITTTESNSPSPPITTTESSS 119
Score = 90 (31.7 bits), Expect = 0.092, P = 0.088
Identities = 32/94 (34%), Positives = 43/94 (45%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAG------AGLCLSTGGEGALAF*VRA 176
G +G SAG+GA A AG+GA A+AG+GA A+ A + GE A
Sbjct: 26 GAGSGAVASAGSGAVASAGSGAVASAGSGAVASGSQSSTNSASTSTTNNGESQTTTPTAA 85
Query: 175 --PFALLAGTPLPKR*SKEL-CPPPALTPRPISS 83
P A + +P P + E P P +T SS
Sbjct: 86 DTPTATKSNSPSPPITTTESNSPSPPITTTESSS 119
>gi|4097543|gb|AAD09505.1| (U64904) ATFP1 [Arabidopsis thaliana]
Length = 181
Frame 3 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | | 181
0 50 100 150
Plus Strand HSPs:
Score = 131 (46.1 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 29/62 (46%), Positives = 32/62 (51%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADK-QIPAG 332
P + + P P + PAPA A APAPAA APAPAPAPAPAP P
Sbjct: 43 PEKPKEPEKPKQPEKPKEPEKTKQPAPAPAPAPAPAAKPAPAPAPAPAPAPKQPGPPPQA 102
Query: 333 IP 338
IP
Sbjct: 103 IP 104
Score = 127 (44.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 30/64 (46%), Positives = 37/64 (57%), Frame = +3
Query: 201 PSPPVD-KQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQ 377
P P + +++ PA A APAPA AA PAPAPAPAPAPA KQ P P ++
Sbjct: 55 PEKPKEPEKTKQPAPAPAPAPAPAAKPAPAPAPAPAPAPKQ-PGPPPQAIPMMPQGQPAM 113
Query: 378 NCGNF 392
CG +
Sbjct: 114 CCGPY 118
Score = 126 (44.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/79 (41%), Positives = 38/79 (48%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP--------A 311
P + + P P + PAPA A APAPAA APAPAPAPAPAP A
Sbjct: 43 PEKPKEPEKPKQPEKPKEPEKTKQPAPAPAPAPAPAAKPAPAPAPAPAPAPKQPGPPPQA 102
Query: 312 DKQIPAGIPGSLKNNYHRADG 374
+P G P Y+ DG
Sbjct: 103 IPMMPQGQPAMCCGPYY--DG 121
Score = 103 (36.3 bits), Expect = 0.00078, P = 0.00078
Identities = 27/56 (48%), Positives = 30/56 (53%), Frame = +3
Query: 210 PVDKQSPAPAAAAAPAPAAAAAPAPAPA-PAPAP-ADKQIPAGIP----GSLKNNY 359
P +PAPA AA PAPA A APAPAP P P P A +P G P G + Y
Sbjct: 67 PAPAPAPAPAPAAKPAPAPAPAPAPAPKQPGPPPQAIPMMPQGQPAMCCGPYYDGY 122
>gi|7292704|gb|AAF48101.1| (AE003487) CG15740 gene product [Drosophila
melanogaster]
Length = 1013
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | | | | | 1013
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 133 (46.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/101 (36%), Positives = 53/101 (52%), Frame = +3
Query: 54 QQQGLVTPNRLEMGR-----GVSAGGGQSSLDY-LFGSGVPASSANGARTQNASAPS--P 209
QQQ +V ++L++ + + G +S L A+S G+ Q +AP+ P
Sbjct: 560 QQQQIVVQSQLQVAQQQQNADIVYGRSKSQQQQALAPQSTLATSTAGSYQQQFTAPAYLP 619
Query: 210 PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGI 335
P +PAP+ AAPAP + AAPAP APAPAPA P +
Sbjct: 620 PT-ATAPAPSPVAAPAPVSIAAPAPLVAPAPAPAPAPAPVAV 660
Score = 127 (44.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 40/99 (40%), Positives = 56/99 (56%), Frame = +3
Query: 54 QQQGLVTPNRLEMGR-----GVSAGGGQSSLDY-LFGSGVPASSANGARTQNASAPS--P 209
QQQ +V ++L++ + + G +S L A+S G+ Q +AP+ P
Sbjct: 560 QQQQIVVQSQLQVAQQQQNADIVYGRSKSQQQQALAPQSTLATSTAGSYQQQFTAPAYLP 619
Query: 210 PVDKQSPAPAAAAAPAPAAAAAPAP--APAPAPAPADKQIPAGI 335
P +PAP+ AAPAP + AAPAP APAPAPAPA PA +
Sbjct: 620 PT-ATAPAPSPVAAPAPVSIAAPAPLVAPAPAPAPA----PAPV 658
Score = 108 (38.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 28/63 (44%), Positives = 31/63 (49%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQI--PA 329
PA A T +SA P A AAPA AAP PAPAPAPAPA ++ PA
Sbjct: 655 PAPVAVVQTTATSSAYQQQYRASGYLPPAVAAPASVRVAAPVPAPAPAPAPAPLRVAAPA 714
Query: 330 GIP 338
P
Sbjct: 715 SAP 717
Score = 104 (36.6 bits), Expect = 0.0033, Sum P(2) = 0.0033
Identities = 28/58 (48%), Positives = 30/58 (51%), Frame = +3
Query: 168 ANGARTQNASAP-SPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A+G +AP S V PAPA A APAP AAPA AP A APA PA P
Sbjct: 676 ASGYLPPAVAAPASVRVAAPVPAPAPAPAPAPLRVAAPASAPVRAVAPAAAPAPAAAP 733
Score = 100 (35.2 bits), Expect = 0.027, Sum P(2) = 0.027
Identities = 28/63 (44%), Positives = 32/63 (50%), Frame = +3
Query: 159 ASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAP----APAPAPADKQIP 326
A+S+ + AS PP +PA AAP PA A APAPAP APA AP P
Sbjct: 665 ATSSAYQQQYRASGYLPPA-VAAPASVRVAAPVPAPAPAPAPAPLRVAAPASAPVRAVAP 723
Query: 327 AGIP 338
A P
Sbjct: 724 AAAP 727
Score = 99 (34.8 bits), Expect = 0.041, Sum P(2) = 0.040
Identities = 29/57 (50%), Positives = 33/57 (57%), Frame = +3
Query: 147 SG-VPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPA--PAAAAAPAPAPAPAPAP 308
SG +P + A A + A AP P P +PAP AAPA P A APA APAPA AP
Sbjct: 677 SGYLPPAVAAPASVRVA-APVPAPAPAPAPAPLRVAAPASAPVRAVAPAAAPAPAAAP 733
Score = 94 (33.1 bits), Expect = 0.32, Sum P(2) = 0.27
Identities = 27/55 (49%), Positives = 31/55 (56%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAP-AP----APAPADKQIPAGIP 338
A AP+P P+ +PA A A APAAA APA AP AP PAP +PA P
Sbjct: 700 APAPAPAPLRVAAPASAPVRAVAPAAAPAPAAAPRAPIHVSGPAPIAISLPAPAP 754
Score = 88 (31.0 bits), Expect = 2.5, Sum P(2) = 0.92
Identities = 25/59 (42%), Positives = 31/59 (52%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPA--PAAAAAP-APAAAAAPAPAPAPAPAPADKQI 323
PA + A + A+ S PV +PA PA AAAP AP + PAP PAPA Q+
Sbjct: 699 PAPAPAPAPLRVAAPASAPVRAVAPAAAPAPAAAPRAPIHVSGPAPIAISLPAPAPTQV 757
Score = 36 (12.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 8/18 (44%), Positives = 12/18 (66%), Frame = +3
Query: 9 TRLLSASESE*VVLLQQQ 62
T+LL + + +LLQQQ
Sbjct: 524 TKLLKQQQEQQQLLLQQQ 541
>gi|71400|pir||SKXLAG dermal gland protein APEG precursor - African clawed frog
(fragment) >gi|1334643|emb|CAA35759.1| (X51394) APEG precursor
protein [Xenopus laevis]
Length = 416
Frame 3 hits (HSPs): __________________________________________
Annotated Domains: _______________________________________________
__________________________________________________
Database sequence: | | | | 416
0 150 300
__________________
Annotated Domains:
Entrez domain: signal sequence (fragment) 1..20
Entrez region: alanine/glutamic acid/glycine/pr 23..344
Entrez domain: trefoil homology #label TRF 349..389
PROSITE P_TREFOIL: P-type 'Trefoil' domain signa 356..376
__________________
Plus Strand HSPs:
Score = 138 (48.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/73 (47%), Positives = 42/73 (57%), Frame = +3
Query: 150 GVPASSANGARTQ---NASAPSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPA----PA 299
G PA + GA AP+P P + ++PAPA A APAPA APAPAPA PA
Sbjct: 107 GAPAPAEGGAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEVEAPA 166
Query: 300 PAPADKQIPAGIP 338
PAPA+ + PA P
Sbjct: 167 PAPAEGEAPAPAP 179
Score = 134 (47.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 36/84 (42%), Positives = 45/84 (53%), Frame = +3
Query: 111 GGGQSSLDYLFGSGVPASSANGARTQ-NASAPSP-PVDKQSPAPAAAA--APAPAAAAAP 278
GG + G+ PA + GA AP+P P + ++PAPA A APAPA A
Sbjct: 86 GGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEGEAPAPAPAEGE 145
Query: 279 APAPA----PAPAPADKQIPAGIP 338
APAPA PAPAPA+ + PA P
Sbjct: 146 APAPAEGEAPAPAPAEVEAPAPAP 169
Score = 132 (46.5 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 35/76 (46%), Positives = 42/76 (55%), Frame = +3
Query: 144 GSGVPASSANGARTQ---NASAPSP-PVDKQSPAPAAAAAPAPAAAA--APAPAPA---- 293
G+ PA + GA AP+P P + +PAPA APAPA A APAPAPA
Sbjct: 77 GAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEGEA 136
Query: 294 PAPAPADKQIPAGIPG 341
PAPAPA+ + PA G
Sbjct: 137 PAPAPAEGEAPAPAEG 152
Score = 129 (45.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/71 (47%), Positives = 40/71 (56%), Frame = +3
Query: 156 PASSANGARTQ---NASAPSP-PVDKQSPAPAAA--AAPAPAAAAAPAPAPA----PAPA 305
PA + GA AP+P P + +PAPA A APAPA APAPAPA PAPA
Sbjct: 71 PAPADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPA 130
Query: 306 PADKQIPAGIP 338
PA+ + PA P
Sbjct: 131 PAEGEAPAPAP 141
Score = 129 (45.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/73 (49%), Positives = 42/73 (57%), Frame = +3
Query: 150 GVPASS-ANGARTQNAS--APSP-PVDKQSPAPA----AAAAPAPAAAAAPAPAP--APA 299
G PA + A GA A AP+P P + +PAPA A APAPA APAPA APA
Sbjct: 59 GAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPA 118
Query: 300 PAPADKQIPAGIP 338
PAPA+ + PA P
Sbjct: 119 PAPAEGEAPAPAP 131
Score = 127 (44.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 31/58 (53%), Positives = 37/58 (63%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAA----APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
A AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA P
Sbjct: 204 APAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 261
Score = 127 (44.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/69 (47%), Positives = 39/69 (56%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAA--AAPAPAP--APAPAP 308
G PA A + AP+P P + ++PAPA APAPA A A PAPA APAPAP
Sbjct: 25 GEPAPAEGVAPAPAEGG-APAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAP 83
Query: 309 ADKQIPAGIP 338
A+ PA P
Sbjct: 84 AEGGAPAPAP 93
Score = 126 (44.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 26/48 (54%), Positives = 32/48 (66%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APA A A APAPAPAPA+ + PA P
Sbjct: 174 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAP 221
Score = 126 (44.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 26/48 (54%), Positives = 32/48 (66%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APA A APA APAPAPA+ + PA P
Sbjct: 184 APAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAP 231
Score = 126 (44.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/69 (49%), Positives = 40/69 (57%), Frame = +3
Query: 156 PASSANGARTQN-ASAPSPP-VDKQSPAPAAAAAPAPAAAA--APAPAPA----PAPAPA 311
PA A + A AP+P V+ +PAPA APAPA A APAPAPA PAPAPA
Sbjct: 141 PAEGEAPAPAEGEAPAPAPAEVEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPA 200
Query: 312 DKQIPAGIP 338
+ + PA P
Sbjct: 201 EGEAPAPAP 209
Score = 125 (44.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 36/74 (48%), Positives = 40/74 (54%), Frame = +3
Query: 150 GVPASS-ANGARTQNAS--APSP-PVDKQSPAPA--AAAAPAPAAAAAPAPAPA----PA 299
G PA + A G A AP+P P + PAPA A APAPA APAPAPA PA
Sbjct: 41 GAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPA 100
Query: 300 PAPADKQIPAGIPG 341
PAPA+ PA G
Sbjct: 101 PAPAEGGAPAPAEG 114
Score = 124 (43.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 30/56 (53%), Positives = 36/56 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA----APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA P
Sbjct: 216 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 271
Score = 124 (43.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 30/56 (53%), Positives = 36/56 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA----APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA P
Sbjct: 226 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 281
Score = 123 (43.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 38/85 (44%), Positives = 45/85 (52%), Frame = +3
Query: 96 RGVSAGGGQSSLDYLFGSGV-PASSANGARTQ---NASAPSPPVD-KQSPAPAAAAAPAP 260
+G AGG + + GV PA + GA AP+P +PAPA A PAP
Sbjct: 19 QGQDAGGEPAPAE-----GVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAP 73
Query: 261 AAAAAPAPAPA----PAPAPADKQIPAGIP 338
A APAPAPA PAPAPA+ PA P
Sbjct: 74 ADGGAPAPAPAEGGAPAPAPAEGGAPAPAP 103
Score = 122 (42.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 27/52 (51%), Positives = 33/52 (63%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPA----PAPADKQIPAGIP 338
AP+P P + ++PAPA APAPA A APAPAPA P+PA+ PA P
Sbjct: 276 APAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGGAPSPAEGGAPAAAP 327
Score = 122 (42.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 30/57 (52%), Positives = 36/57 (63%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA----APAPAAAAAPAPAPA----PAPAPADKQIPAGIPG 341
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA G
Sbjct: 236 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEG 292
Score = 121 (42.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 27/51 (52%), Positives = 33/51 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP--G 341
AP+P P + ++PAPA A APA A A APAPAPAPA+ + PA P G
Sbjct: 174 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEG 224
Score = 120 (42.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/54 (53%), Positives = 35/54 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPAPA----PAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA A APAPAPA PAPA+ + PA P
Sbjct: 246 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAP 299
Score = 120 (42.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/54 (53%), Positives = 35/54 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA A APAPA PAPAPA+ + PA P
Sbjct: 256 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAP 309
Score = 120 (42.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/58 (51%), Positives = 36/58 (62%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA------APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA P
Sbjct: 184 APAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 241
Score = 120 (42.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/58 (51%), Positives = 36/58 (62%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAA------PAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A A PAPA APAPAPA PAPAPA+ + PA P
Sbjct: 194 APAPAPAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 251
Score = 119 (41.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/55 (52%), Positives = 35/55 (63%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPA----PAPAPADKQIPAGIPG 341
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ P+ G
Sbjct: 266 APAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGGAPSPAEG 320
Score = 114 (40.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 27/56 (48%), Positives = 31/56 (55%), Frame = +3
Query: 186 QNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPA----PAPAPADKQIPAGIPG 341
Q+A P + +PAPA APAPA A APAPA PAPAPA+ PA G
Sbjct: 21 QDAGGEPAPAEGVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADG 76
Score = 109 (38.4 bits), Expect = 0.00017, P = 0.00017
Identities = 24/39 (61%), Positives = 25/39 (64%), Frame = +3
Query: 228 PAPAAAAAPAPAAAAAPAPAPAP--APAPADKQIPAGIP 338
PAPA APAPA APAPAPA APAPA+ PA P
Sbjct: 27 PAPAEGVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAP 65
Score = 107 (37.7 bits), Expect = 0.00028, P = 0.00028
Identities = 32/80 (40%), Positives = 42/80 (52%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAA--AAPAPAAAAAPAPAPA----PAPAPAD 314
PA A + AP+P P + ++PAPA A AP+PA APA APA PAPAPA
Sbjct: 281 PAEGEAPAPAEG-EAPAPAPAEGEAPAPAPAEGGAPSPAEGGAPAAAPAEGGAPAPAPAP 339
Query: 315 KQIPAGIPGSLKNNYHRADGQNCG 386
++ + + R D CG
Sbjct: 340 VEVGPKTEDCKGDPFKRTD---CG 360
>gi|12043691|gb|AAG47619.1|AF104711_1 (AF104711) merozoite surface protein
[Plasmodium falciparum]
Length = 137
Frame -3 hits (HSPs): ____________________________
__________________________________________________
Database sequence: | | | | 137
0 50 100
Minus Strand HSPs:
Score = 130 (45.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/50 (60%), Positives = 34/50 (68%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTG-GEGALA 191
G AG AG+GAGAGAGAGA A +GAGA A AGAG +G G GA+A
Sbjct: 34 GSGAGAGAVAGSGAGAGAGAGAVAGSGAGAGAGAGAGAVAGSGAGAGAVA 83
Score = 128 (45.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/48 (56%), Positives = 34/48 (70%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGL-CLSTGGEGA 197
G AG +GAGAGAGAGAGA A +GAGA A AG+G +++ G+GA
Sbjct: 50 GAGAGAVAGSGAGAGAGAGAGAVAGSGAGAGAVAGSGAGAVASAGDGA 97
Score = 116 (40.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Frame = -3
Query: 340 PGIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTGGEGALA 191
P AG +GAGAGA AG+GA A AGAGA A +GAG G GA+A
Sbjct: 25 PSTGAGAVAGSGAGAGAVAGSGAGAGAGAGAVAGSGAGAGAGAGA-GAVA 73
Score = 104 (36.6 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 23/37 (62%), Positives = 26/37 (70%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAG 227
G AG AGA AG+GAGAGA A +GAGA A+AG G
Sbjct: 60 GAGAGAGAGAGAVAGSGAGAGAVAGSGAGAVASAGDG 96
Score = 82 (28.9 bits), Expect = 0.40, P = 0.33
Identities = 20/34 (58%), Positives = 23/34 (67%), Frame = -3
Query: 337 GIPAGICLSAGAGAGA--GAGAGAAAAAGAGAAA 242
G AG +GAGAGA G+GAGA A+AG GA A
Sbjct: 66 GAGAGAVAGSGAGAGAVAGSGAGAVASAGDGADA 99
>gi|12043693|gb|AAG47620.1|AF104712_1 (AF104712) merozoite surface protein
[Plasmodium falciparum]
Length = 156
Frame -3 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | 156
0 50 100 150
Minus Strand HSPs:
Score = 130 (45.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/50 (60%), Positives = 34/50 (68%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTG-GEGALA 191
G AG AG+GAGAGAGAGA A +GAGA A AGAG +G G GA+A
Sbjct: 28 GSGAGAGAVAGSGAGAGAGAGAVAGSGAGAGAGAGAGAVAGSGAGAGAVA 77
Score = 126 (44.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 27/48 (56%), Positives = 33/48 (68%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGL-CLSTGGEGA 197
G AG +GAGAGAGAGAGA A +GAGA A AG+G +++ G GA
Sbjct: 44 GAGAGAVAGSGAGAGAGAGAGAVAGSGAGAGAVAGSGAGAVASAGNGA 91
Score = 116 (40.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Frame = -3
Query: 340 PGIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTGGEGALA 191
P AG +GAGAGA AG+GA A AGAGA A +GAG G GA+A
Sbjct: 19 PSTGAGAVAGSGAGAGAVAGSGAGAGAGAGAVAGSGAGAGAGAGA-GAVA 67
Score = 104 (36.6 bits), Expect = 0.00019, P = 0.00019
Identities = 23/37 (62%), Positives = 26/37 (70%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAG 227
G AG AGA AG+GAGAGA A +GAGA A+AG G
Sbjct: 54 GAGAGAGAGAGAVAGSGAGAGAVAGSGAGAVASAGNG 90
Score = 82 (28.9 bits), Expect = 0.70, P = 0.51
Identities = 20/34 (58%), Positives = 23/34 (67%), Frame = -3
Query: 337 GIPAGICLSAGAGAGA--GAGAGAAAAAGAGAAA 242
G AG +GAGAGA G+GAGA A+AG GA A
Sbjct: 60 GAGAGAVAGSGAGAGAVAGSGAGAVASAGNGADA 93
>gi|6900006|emb|CAB71294.1| (AJ251917) chorion protein s18 [Ceratitis capitata]
Length = 332
Frame 3 hits (HSPs): _________ ____________________________
__________________________________________________
Database sequence: | | | | 332
0 150 300
Plus Strand HSPs:
Score = 136 (47.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/67 (50%), Positives = 43/67 (64%), Frame = +3
Query: 141 FGSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPA----PAPAPA 305
+ + P+ SA A + +A AP+P P +PAPA +APAPAA +APAPA PAPAPA
Sbjct: 201 YSAPAPSYSAP-APSYSAPAPAPAPAAYSAPAPAVYSAPAPAAYSAPAPAVYSAPAPAPA 259
Query: 306 PADKQIPA 329
PA PA
Sbjct: 260 PAAYSAPA 267
Score = 128 (45.1 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 34/68 (50%), Positives = 41/68 (60%), Frame = +3
Query: 141 FGSGVPASSANGARTQNA--SAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPA----P 302
+ + P+ SA A SAP+P V +PAPAA +APAPA +APAPAPAPA P
Sbjct: 208 YSAPAPSYSAPAPAPAPAAYSAPAPAV-YSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAP 266
Query: 303 APADKQIPA 329
APA PA
Sbjct: 267 APAAYSAPA 275
Score = 126 (44.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 31/62 (50%), Positives = 37/62 (59%), Frame = +3
Query: 156 PASSANG-ARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAG 332
PA S + A + +A APS +PAPAA +APAPA +APAPA APAPA PA
Sbjct: 197 PAPSYSAPAPSYSAPAPSYSAPAPAPAPAAYSAPAPAVYSAPAPAAYSAPAPAVYSAPAP 256
Query: 333 IP 338
P
Sbjct: 257 AP 258
Score = 119 (41.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 38/89 (42%), Positives = 50/89 (56%), Frame = +3
Query: 96 RGVSAGGGQSSLDYLFGSGVPASSANG-ARTQNASAPSPPVDKQSPAPA-AAAAPAPAAA 269
+G GG +L Y+ SG + SA A + +A AP+P +PAP+ +A APAPA +
Sbjct: 143 QGSYPSGG--NLAYVIQSGGSSYSAPAPAASYSAPAPAPAASYSAPAPSYSAPAPAPAPS 200
Query: 270 --------AAPAP---APAPAPAPADKQIPA 329
+APAP APAPAPAPA PA
Sbjct: 201 YSAPAPSYSAPAPSYSAPAPAPAPAAYSAPA 231
Score = 114 (40.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 31/73 (42%), Positives = 42/73 (57%), Frame = +3
Query: 99 GVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAA-AAPAPAAAAA 275
G SAG Y G + +G + +A AP+ +PAPAA+ +APAP+ +A
Sbjct: 135 GSSAGSSHQG-SYPSGGNLAYVIQSGGSSYSAPAPAASYSAPAPAPAASYSAPAPSYSA- 192
Query: 276 PAPAPAP---APAPA 311
PAPAPAP APAP+
Sbjct: 193 PAPAPAPSYSAPAPS 207
Score = 112 (39.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 33/80 (41%), Positives = 45/80 (56%), Frame = +3
Query: 99 GVSAGGGQSSLDYLFGSGVPASSANG-ARTQNASAPSPPVDKQSPAPAAAAAPAPA-AAA 272
G S + Y + PA+S + A + +A AP+P +PAP+ +A PAP+ +A
Sbjct: 160 GSSYSAPAPAASYSAPAPAPAASYSAPAPSYSAPAPAPAPSYSAPAPSYSA-PAPSYSAP 218
Query: 273 APAPAPAP--APAPADKQIPA 329
APAPAPA APAPA PA
Sbjct: 219 APAPAPAAYSAPAPAVYSAPA 239
Score = 108 (38.0 bits), Expect = 0.00015, P = 0.00015
Identities = 27/60 (45%), Positives = 37/60 (61%), Frame = +3
Query: 138 LFGSGVPAS-SANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPA 311
++ + PA+ SA +A AP+P P +PAPAA +APAPAA +APA + A APA
Sbjct: 234 VYSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAPAPAAYSAPAPAAYSAPASSGYGASAPA 293
Score = 105 (37.0 bits), Expect = 0.0013, P = 0.0013
Identities = 33/86 (38%), Positives = 45/86 (52%), Frame = +3
Query: 138 LFGSGVPAS-SANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAP----APAPA 299
++ + PA+ SA +A AP+P P +PAPAA +APAPAA +APA A APA
Sbjct: 234 VYSAPAPAAYSAPAPAVYSAPAPAPAPAAYSAPAPAAYSAPAPAAYSAPASSGYGASAPA 293
Query: 300 ---PAPADKQIPAGIPGSLKNNYHRA 368
PA A + A + +Y A
Sbjct: 294 AAAPAAAHQPSAAAARSYISGSYGAA 319
Score = 73 (25.7 bits), Expect = 0.47, Sum P(2) = 0.37
Identities = 20/34 (58%), Positives = 24/34 (70%), Frame = +3
Query: 246 AAPAPAAA-AAPAPAPAP---APAPADKQIPAGIP 338
+APAPAA+ +APAPAPA APAP+ PA P
Sbjct: 164 SAPAPAASYSAPAPAPAASYSAPAPS-YSAPAPAP 197
Score = 52 (18.3 bits), Expect = 0.47, Sum P(2) = 0.37
Identities = 21/52 (40%), Positives = 24/52 (46%), Frame = +3
Query: 51 LQQQGLVTPNRLEMGRG-VSAGGGQSSLDYLFGSGVPASSANGARTQNASAPS 206
LQ Q + G G SAG G SS Y SG S+NG +SAPS
Sbjct: 47 LQVQTIAAAGGSSAGYGGSSAGYGASSGSYGASSGGYGGSSNGYGA--SSAPS 97
>gi|731172|sp|P17437|XP2_XENLA SKIN SECRETORY PROTEIN XP2 PRECURSOR (APEG
PROTEIN)
Length = 439
Frame 3 hits (HSPs): ________________________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 439
0 150 300
__________________
Annotated Domains:
DOMO DM00829: NEUROHYPOPHYSIALHORMONES 1..27
DOMO DM00566: TREFOIL 344..390
DOMO DM00566: TREFOIL 392..438
Entrez pyrrolidone-carboxylic-acid site: (PROBA 23
Entrez Domain: 33 X REPEATS OF G-[GE]-[AP](2,4) 26..343
Entrez Domain: P-TYPE 1. 350..391
Entrez Domain: P-TYPE 2. 397..438
Entrez Splicing variant: MISSING (IN ISOFORM XP 26..343
PFAM trefoil: Trefoil (P-type) domain 350..391
PFAM trefoil: Trefoil (P-type) domain 397..438
PRINTS PTREFOIL1: PS2 protein motif I - 2 355..367
PRINTS PTREFOIL2: PS2 protein motif II - 2 367..379
PRINTS PTREFOIL3: PS2 protein motif III - 2 379..391
PRODOM PD047359: XP2_XENLA 1..34
PRODOM PD000540: H1(18) O76786(11) TONB(10) 92..283
PRODOM PD002823: SP(6) XP4(4) MUA1(4) 343..381
PRODOM PD002823: SP(6) XP4(4) MUA1(4) 397..428
PROSITE P_TREFOIL: P-type 'Trefoil' domain signa 358..378
PROSITE P_TREFOIL: P-type 'Trefoil' domain signa 405..425
__________________
Plus Strand HSPs:
Score = 138 (48.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/73 (47%), Positives = 42/73 (57%), Frame = +3
Query: 150 GVPASSANGARTQ---NASAPSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPA----PA 299
G PA + GA AP+P P + ++PAPA A APAPA APAPAPA PA
Sbjct: 109 GAPAPAEGGAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEVEAPA 168
Query: 300 PAPADKQIPAGIP 338
PAPA+ + PA P
Sbjct: 169 PAPAEGEAPAPAP 181
Score = 134 (47.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/84 (42%), Positives = 45/84 (53%), Frame = +3
Query: 111 GGGQSSLDYLFGSGVPASSANGARTQ-NASAPSP-PVDKQSPAPAAAA--APAPAAAAAP 278
GG + G+ PA + GA AP+P P + ++PAPA A APAPA A
Sbjct: 88 GGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEGEAPAPAPAEGE 147
Query: 279 APAPA----PAPAPADKQIPAGIP 338
APAPA PAPAPA+ + PA P
Sbjct: 148 APAPAEGEAPAPAPAEVEAPAPAP 171
Score = 132 (46.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 35/76 (46%), Positives = 42/76 (55%), Frame = +3
Query: 144 GSGVPASSANGARTQ---NASAPSP-PVDKQSPAPAAAAAPAPAAAA--APAPAPA---- 293
G+ PA + GA AP+P P + +PAPA APAPA A APAPAPA
Sbjct: 79 GAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEGEA 138
Query: 294 PAPAPADKQIPAGIPG 341
PAPAPA+ + PA G
Sbjct: 139 PAPAPAEGEAPAPAEG 154
Score = 129 (45.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/71 (47%), Positives = 40/71 (56%), Frame = +3
Query: 156 PASSANGARTQ---NASAPSP-PVDKQSPAPAAA--AAPAPAAAAAPAPAPA----PAPA 305
PA + GA AP+P P + +PAPA A APAPA APAPAPA PAPA
Sbjct: 73 PAPADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPA 132
Query: 306 PADKQIPAGIP 338
PA+ + PA P
Sbjct: 133 PAEGEAPAPAP 143
Score = 129 (45.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/73 (49%), Positives = 42/73 (57%), Frame = +3
Query: 150 GVPASS-ANGARTQNAS--APSP-PVDKQSPAPA----AAAAPAPAAAAAPAPAP--APA 299
G PA + A GA A AP+P P + +PAPA A APAPA APAPA APA
Sbjct: 61 GAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPA 120
Query: 300 PAPADKQIPAGIP 338
PAPA+ + PA P
Sbjct: 121 PAPAEGEAPAPAP 133
Score = 127 (44.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 31/58 (53%), Positives = 37/58 (63%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAA----APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
A AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA P
Sbjct: 206 APAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 263
Score = 127 (44.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 33/69 (47%), Positives = 39/69 (56%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAA--AAPAPAP--APAPAP 308
G PA A + AP+P P + ++PAPA APAPA A A PAPA APAPAP
Sbjct: 27 GEPAPAEGVAPAPAEGG-APAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAP 85
Query: 309 ADKQIPAGIP 338
A+ PA P
Sbjct: 86 AEGGAPAPAP 95
Score = 126 (44.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 26/48 (54%), Positives = 32/48 (66%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APA A A APAPAPAPA+ + PA P
Sbjct: 176 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAP 223
Score = 126 (44.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 26/48 (54%), Positives = 32/48 (66%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APA A APA APAPAPA+ + PA P
Sbjct: 186 APAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAP 233
Score = 126 (44.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/69 (49%), Positives = 40/69 (57%), Frame = +3
Query: 156 PASSANGARTQN-ASAPSPP-VDKQSPAPAAAAAPAPAAAA--APAPAPA----PAPAPA 311
PA A + A AP+P V+ +PAPA APAPA A APAPAPA PAPAPA
Sbjct: 143 PAEGEAPAPAEGEAPAPAPAEVEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPA 202
Query: 312 DKQIPAGIP 338
+ + PA P
Sbjct: 203 EGEAPAPAP 211
Score = 125 (44.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/74 (48%), Positives = 40/74 (54%), Frame = +3
Query: 150 GVPASS-ANGARTQNAS--APSP-PVDKQSPAPA--AAAAPAPAAAAAPAPAPA----PA 299
G PA + A G A AP+P P + PAPA A APAPA APAPAPA PA
Sbjct: 43 GAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPA 102
Query: 300 PAPADKQIPAGIPG 341
PAPA+ PA G
Sbjct: 103 PAPAEGGAPAPAEG 116
Score = 124 (43.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 30/56 (53%), Positives = 36/56 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA----APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA P
Sbjct: 218 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 273
Score = 124 (43.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 30/56 (53%), Positives = 36/56 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA----APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA P
Sbjct: 228 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 283
Score = 123 (43.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 38/85 (44%), Positives = 45/85 (52%), Frame = +3
Query: 96 RGVSAGGGQSSLDYLFGSGV-PASSANGARTQ---NASAPSPPVD-KQSPAPAAAAAPAP 260
+G AGG + + GV PA + GA AP+P +PAPA A PAP
Sbjct: 21 QGQDAGGEPAPAE-----GVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAP 75
Query: 261 AAAAAPAPAPA----PAPAPADKQIPAGIP 338
A APAPAPA PAPAPA+ PA P
Sbjct: 76 ADGGAPAPAPAEGGAPAPAPAEGGAPAPAP 105
Score = 122 (42.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 27/52 (51%), Positives = 33/52 (63%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPA----PAPADKQIPAGIP 338
AP+P P + ++PAPA APAPA A APAPAPA P+PA+ PA P
Sbjct: 278 APAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGGAPSPAEGGAPAAAP 329
Score = 122 (42.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 30/57 (52%), Positives = 36/57 (63%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA----APAPAAAAAPAPAPA----PAPAPADKQIPAGIPG 341
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA G
Sbjct: 238 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEG 294
Score = 121 (42.6 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 27/51 (52%), Positives = 33/51 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP--G 341
AP+P P + ++PAPA A APA A A APAPAPAPA+ + PA P G
Sbjct: 176 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEG 226
Score = 120 (42.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/54 (53%), Positives = 35/54 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPAPA----PAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA A APAPAPA PAPA+ + PA P
Sbjct: 248 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAP 301
Score = 120 (42.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/54 (53%), Positives = 35/54 (64%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA A APAPA PAPAPA+ + PA P
Sbjct: 258 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAP 311
Score = 120 (42.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/58 (51%), Positives = 36/58 (62%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA------APAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ + PA P
Sbjct: 186 APAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 243
Score = 120 (42.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/58 (51%), Positives = 36/58 (62%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAA------PAPAAAAAPAPAPA----PAPAPADKQIPAGIP 338
AP+P P + ++PAPA A A PAPA APAPAPA PAPAPA+ + PA P
Sbjct: 196 APAPAPAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP 253
Score = 119 (41.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/55 (52%), Positives = 35/55 (63%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPA----PAPAPADKQIPAGIPG 341
AP+P P + ++PAPA A APAPA APAPAPA PAPAPA+ P+ G
Sbjct: 268 APAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGGAPSPAEG 322
Score = 114 (40.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/56 (48%), Positives = 31/56 (55%), Frame = +3
Query: 186 QNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPA----PAPAPADKQIPAGIPG 341
Q+A P + +PAPA APAPA A APAPA PAPAPA+ PA G
Sbjct: 23 QDAGGEPAPAEGVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADG 78
Score = 109 (38.4 bits), Expect = 0.00018, P = 0.00018
Identities = 24/39 (61%), Positives = 25/39 (64%), Frame = +3
Query: 228 PAPAAAAAPAPAAAAAPAPAPAP--APAPADKQIPAGIP 338
PAPA APAPA APAPAPA APAPA+ PA P
Sbjct: 29 PAPAEGVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAP 67
Score = 107 (37.7 bits), Expect = 0.00030, P = 0.00030
Identities = 32/80 (40%), Positives = 42/80 (52%), Frame = +3
Query: 156 PASSANGARTQNASAPSP-PVDKQSPAPAAA--AAPAPAAAAAPAPAPA----PAPAPAD 314
PA A + AP+P P + ++PAPA A AP+PA APA APA PAPAPA
Sbjct: 283 PAEGEAPAPAEG-EAPAPAPAEGEAPAPAPAEGGAPSPAEGGAPAAAPAEGGAPAPAPAP 341
Query: 315 KQIPAGIPGSLKNNYHRADGQNCG 386
++ + + R D CG
Sbjct: 342 VEVGPKTEDCKGDPFKRTD---CG 362
>gi|992946|dbj|BAA11015.1| (D64137) p57KIP2 [Homo sapiens]
Length = 305
Frame 3 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | | || 305
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 27/38 (71%), Positives = 29/38 (76%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP 308
AP+P P +PAPA AAPAPA A APAPAPAPAPAP
Sbjct: 168 APAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 131 (46.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 26/35 (74%), Positives = 27/35 (77%), Frame = +3
Query: 225 SPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPA 329
+PAPA A APAPA AAPAPAPAPAPAPA PA
Sbjct: 170 APAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPA 204
Score = 129 (45.4 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/44 (63%), Positives = 32/44 (72%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP--ADKQ 320
AP+P P +PAPA AAPAPA A APAPAPAPAPAP A ++
Sbjct: 168 APAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQE 211
Score = 123 (43.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 32/54 (59%), Positives = 33/54 (61%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPAP--APAPADKQIPAGIP 338
A AP+P PV AP A A APAPA A APAPAPAP APAPA PA P
Sbjct: 146 APAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP 199
Score = 121 (42.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 30/54 (55%), Positives = 31/54 (57%), Frame = +3
Query: 192 ASAPSPPVDKQSPAPAAAAAPAPAAAAAP------APAPAPAPAPADKQIPAGIP 338
AS P PPV +PAPA A AP A AAP APAPAPAPAPA P P
Sbjct: 134 ASTP-PPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAP 187
Score = 121 (42.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 33/56 (58%), Positives = 35/56 (62%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAA--AAP--APAAAA--APAPAPAPAPAPADKQIPAGIP 338
AS P P PV +PAPA A AAP AP A A APAPAPAPAPAPA + A P
Sbjct: 134 ASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAP 189
Score = 104 (36.6 bits), Expect = 0.0021, P = 0.0021
Identities = 23/41 (56%), Positives = 26/41 (63%), Frame = +3
Query: 192 ASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPAD 314
A AP+P +P A A APAPA A APAPAPAP AP +
Sbjct: 172 APAPAP-APAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQE 211
Score = 96 (33.8 bits), Expect = 0.042, P = 0.041
Identities = 18/36 (50%), Positives = 20/36 (55%), Frame = +3
Query: 228 PAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGI 335
P PA A+ P P APAPAPAPAP A P +
Sbjct: 129 PVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAV 164
>gi|7140837|gb|AAD17484.2| (AF047034) dihydrolipoamide acetyltransferase
[Streptomyces seoulensis]
Length = 612
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 612
0 150 300 450 600
Plus Strand HSPs:
Score = 139 (48.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 34/70 (48%), Positives = 39/70 (55%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDK--QSPAPAAAAAPAPAAAAAPAP-----APAPAPAPAD 314
PA+ A A A AP+ P Q+PAP A +APAP APAP APAPAPAPA
Sbjct: 225 PAAEAPAAPAPAAPAPAAPAAPAPQAPAPQAPSAPAPQQQTAPAPDPAPAAPAPAPAPAP 284
Query: 315 KQIPAGIPGS 344
Q PA P +
Sbjct: 285 AQAPAAAPSA 294
Score = 117 (41.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 34/70 (48%), Positives = 39/70 (55%), Frame = +3
Query: 144 GSGVPASSANGARTQNA-SAPSPPVDKQSPAPAAAAAPAPAAAAAPAP-APAP----APA 305
G+ + A GA A AP P ++PA A AAPAPAA AAPAP APAP APA
Sbjct: 202 GAKLAVIGAAGAAPAAAPEAPKAPA-AEAPAAPAPAAPAPAAPAAPAPQAPAPQAPSAPA 260
Query: 306 PADKQIPAGIP 338
P + PA P
Sbjct: 261 PQQQTAPAPDP 271
Score = 110 (38.7 bits), Expect = 0.00023, P = 0.00023
Identities = 32/62 (51%), Positives = 34/62 (54%), Frame = +3
Query: 156 PASSANGARTQNA---SAPSPPVDKQSPAPA---AAAAPAPAAAAAPAPAPAPAP-APAD 314
PA +A A A APS P +Q APA A AAPAPA A APA APA AP AP
Sbjct: 238 PAPAAPAAPAPQAPAPQAPSAPAPQQQTAPAPDPAPAAPAPAPAPAPAQAPAAAPSAPTA 297
Query: 315 KQ 320
Q
Sbjct: 298 TQ 299
Score = 85 (29.9 bits), Expect = 3.4, P = 0.97
Identities = 26/50 (52%), Positives = 27/50 (54%), Frame = +3
Query: 183 TQNASAPSPPVDKQSPAPAAAA-AP-APAAAAAPAPAPAPAPAPADKQIPA 329
T A + APAAA AP APAA A APAPA APAPA PA
Sbjct: 198 TAEVGAKLAVIGAAGAAPAAAPEAPKAPAAEAPAAPAPA-APAPAAPAAPA 247
Score = 83 (29.2 bits), Expect = 6.1, P = 1.0
Identities = 22/46 (47%), Positives = 25/46 (54%), Frame = +3
Query: 159 ASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAA-AAPAPAPA 293
A SA + Q A AP P +PAPA A A APAAA +AP A
Sbjct: 255 APSAPAPQQQTAPAPDPAPAAPAPAPAPAPAQAPAAAPSAPTATQA 300
>gi|4557441 ref|NP_000067.1| cyclin-dependent kinase inhibitor 1C [Homo
sapiens] >gi|1705731|sp|P49918|CDNC_HUMAN CYCLIN-DEPENDENT KINASE
INHIBITOR 1C (CYCLIN-DEPENDENT KINASE INHIBITOR P57) (P57KIP2)
>gi|7512364|pir||G02424 cyclin-dependent kinase inhibitor 1C -
human >gi|790248|gb|AAA85095.1| (U22398) p57KIP2 [Homo sapiens]
>gi|1213448|gb|AAB05896.1| (U48869) cdk-inhibitor p57/KIP2 [Homo
sapiens] >gi|1772490|dbj|BAA11014.1| (D64137) p57KIP2 [Homo
sapiens]
Length = 316
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | | | 316
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 27/38 (71%), Positives = 29/38 (76%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP 308
AP+P P +PAPA AAPAPA A APAPAPAPAPAP
Sbjct: 179 APAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 216
Score = 131 (46.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 26/35 (74%), Positives = 27/35 (77%), Frame = +3
Query: 225 SPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPA 329
+PAPA A APAPA AAPAPAPAPAPAPA PA
Sbjct: 181 APAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPA 215
Score = 129 (45.4 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 28/44 (63%), Positives = 32/44 (72%), Frame = +3
Query: 198 APSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP--ADKQ 320
AP+P P +PAPA AAPAPA A APAPAPAPAPAP A ++
Sbjct: 179 APAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQE 222
Score = 123 (43.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/54 (59%), Positives = 33/54 (61%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAAA--APAPAAAAAPAPAPAP--APAPADKQIPAGIP 338
A AP+P PV AP A A APAPA A APAPAPAP APAPA PA P
Sbjct: 157 APAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP 210
Score = 121 (42.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 30/54 (55%), Positives = 31/54 (57%), Frame = +3
Query: 192 ASAPSPPVDKQSPAPAAAAAPAPAAAAAP------APAPAPAPAPADKQIPAGIP 338
AS P PPV +PAPA A AP A AAP APAPAPAPAPA P P
Sbjct: 145 ASTP-PPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAP 198
Score = 121 (42.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 33/56 (58%), Positives = 35/56 (62%), Frame = +3
Query: 192 ASAPSP-PVDKQSPAPAAA--AAP--APAAAA--APAPAPAPAPAPADKQIPAGIP 338
AS P P PV +PAPA A AAP AP A A APAPAPAPAPAPA + A P
Sbjct: 145 ASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAP 200
Score = 104 (36.6 bits), Expect = 0.0022, P = 0.0022
Identities = 23/41 (56%), Positives = 26/41 (63%), Frame = +3
Query: 192 ASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPAD 314
A AP+P +P A A APAPA A APAPAPAP AP +
Sbjct: 183 APAPAP-APAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQE 222
Score = 96 (33.8 bits), Expect = 0.044, P = 0.043
Identities = 18/36 (50%), Positives = 20/36 (55%), Frame = +3
Query: 228 PAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGI 335
P PA A+ P P APAPAPAPAP A P +
Sbjct: 140 PVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAV 175
>gi|7446459|pir||T14336 RAD23 protein, isoform I - carrot
>gi|1914683|emb|CAA72741.1| (Y12013) RAD23, isoform I [Daucus
carota]
Length = 382
Frame 3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 382
0 150 300
Plus Strand HSPs:
Score = 135 (47.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/68 (42%), Positives = 35/68 (51%), Frame = +3
Query: 165 SANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGS 344
S G+ T A+AP P P+ A A P A+ P PAP+PAPAPA IP+ GS
Sbjct: 81 SGEGSTTSTAAAPKAPQTSAPPSVPAPAVSQPPASTLPVPAPSPAPAPATAPIPSAAVGS 140
Query: 345 LKNNYHRA 368
N Y A
Sbjct: 141 EANVYDSA 148
Score = 94 (33.1 bits), Expect = 0.12, P = 0.11
Identities = 24/56 (42%), Positives = 29/56 (51%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAP-SPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPA 311
G G S+A + SAP S P S PA+ P PA + APAPA AP P+ A
Sbjct: 82 GEGSTTSTAAAPKAPQTSAPPSVPAPAVSQPPASTL-PVPAPSPAPAPATAPIPSAA 137
>gi|6752377|gb|AAF27699.1|AF071803_1 (AF071803) PspA [Streptococcus pneumoniae]
Length = 401
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 401
0 150 300
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 27/47 (57%), Positives = 30/47 (63%), Frame = +3
Query: 198 APSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP+P ++PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 346 APAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 392
Score = 132 (46.5 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 29/51 (56%), Positives = 30/51 (58%), Frame = +3
Query: 192 ASAPSP--PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A AP+P P PAPA APAP A AP PAPAP PAPA K PA P
Sbjct: 348 APAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 398
Score = 126 (44.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/50 (58%), Positives = 31/50 (62%), Frame = +3
Query: 201 PSP-PVDKQSPAPAA---AAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
P+P P K +PAPA A APAP A AP PAPAP PAPA K PA P
Sbjct: 337 PAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 386
Score = 126 (44.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/76 (44%), Positives = 41/76 (53%), Frame = +3
Query: 117 GQSSLDYLFGSGVPASSANGARTQNASAP-SPPVDK-QSPAPAAAAAPAPAAAAAP-APA 287
G+ + YL + A A +N A VD+ ++PAPA A PAPA A P APA
Sbjct: 299 GEQAEQYLVAAKKDLD-AKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPA 357
Query: 288 PAPAPAPADKQIPAGIP 338
PAP PAPA K PA P
Sbjct: 358 PAPKPAPAPKPAPAPKP 374
Score = 125 (44.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/54 (51%), Positives = 31/54 (57%), Frame = +3
Query: 156 PASSANGARTQNASAPSP---PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAP 308
P + A T A AP+P P K +PAP A AP PA A PAPAP PAPAP
Sbjct: 343 PKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAP 396
>gi|6649624|gb|AAF21486.1|U91663_1 (U91663) merozoite surface antigen 2
[Plasmodium falciparum]
Length = 220
Frame -3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | 220
0 50 100 150 200
Minus Strand HSPs:
Score = 127 (44.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 31/48 (64%), Positives = 31/48 (64%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTG-GEGA 197
G AG AGAGAGAGAGAGA A AGAGA A AGAG G G GA
Sbjct: 32 GAGAGASGRAGAGAGAGAGAGAGAGAGAGAGAGAGAGASGRAGAGAGA 79
Score = 126 (44.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 30/50 (60%), Positives = 32/50 (64%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTG-GEGALA 191
G AG AGAGAGAGAGAGA A AGA A AGAG G G+GA+A
Sbjct: 42 GAGAGAGAGAGAGAGAGAGAGAGAGAGASGRAGAGAGASGRAGSGDGAVA 91
Score = 113 (39.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/44 (56%), Positives = 25/44 (56%), Frame = -3
Query: 331 PAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGLCLSTGGEG 200
P G AGA AGAGAGA A AGAGA A AGAG G G
Sbjct: 28 PTGAGAGAGASGRAGAGAGAGAGAGAGAGAGAGAGAGAGAGASG 71
Score = 113 (39.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/50 (54%), Positives = 32/50 (64%), Frame = -3
Query: 337 GIPAGICLSAGAGAGAGAGAGAAAAAGAGAAAAAGAGL---CLSTGGEGA 197
G AG AGAGAGAGAGAGA+ AGAGA A+ AG +++ G GA
Sbjct: 48 GAGAGAGAGAGAGAGAGAGAGASGRAGAGAGASGRAGSGDGAVASAGSGA 97
Score = 77 (27.1 bits), Expect = 7.5, P = 1.0
Identities = 21/46 (45%), Positives = 26/46 (56%), Frame = -3
Query: 337 GIPAGICLSAGAGAGA----GAGAGAAAAAGAGAAAAAGAGLCLST 212
G AG AGAGAGA G+G GA A+AG+GA A + +T
Sbjct: 64 GAGAGASGRAGAGAGASGRAGSGDGAVASAGSGADAEGSSSTTTTT 109
>gi|6468437|emb|CAB61597.1| (AL133210) hypothetical protein SCG11A.16
[Streptomyces coelicolor A3(2)]
Length = 667
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 667
0 150 300 450 600
Plus Strand HSPs:
Score = 136 (47.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 33/94 (35%), Positives = 41/94 (43%), Frame = +3
Query: 66 LVTPNRLEMGRGVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAA 245
L+ P+ L SA + G+ P SA G +P P + +PAPA
Sbjct: 77 LLAPDCLHRAAAASAAPVAEPTEPAVGTPSPTDSAVGT-----PSPGEPSQETAPAPAGP 131
Query: 246 AAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSL 347
A PA AA PAP P P PAP Q P PG +
Sbjct: 132 ATPAATPAAVPAPGPTPPPAPPAAQTPGAAPGGV 165
Score = 90 (31.7 bits), Expect = 0.88, P = 0.59
Identities = 32/98 (32%), Positives = 39/98 (39%), Frame = +3
Query: 66 LVTPNRLEMGRGVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAA 245
L+ P+ L SA + G+ P SA G +P P + +PAPA
Sbjct: 77 LLAPDCLHRAAAASAAPVAEPTEPAVGTPSPTDSAVGT-----PSPGEPSQETAPAPAGP 131
Query: 246 AAPAPAAAAAPAPAPAPAPAPADKQIP---------------A 329
A PA AA PAP P P PAP Q P A
Sbjct: 132 ATPAATPAAVPAPGPTPPPAPPAAQTPGAAPGGVPAPESATPA 174
>gi|12230317|sp|Q9SAV1|MB11_ARATH MYROSINASE BINDING PROTEIN-LIKE F5F19.9
>gi|4220450|gb|AAD12677.1| (AC006216) Identical to gb|D85194 mRNA
which is similar to gb|AF054906 myrosinase-binding protein homolog
from Arabidopsis thaliana. ESTs gb|Z34045 and gb|Z34877 come from
this gene
Length = 642
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 642
0 150 300 450 600
Plus Strand HSPs:
Score = 135 (47.5 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 30/57 (52%), Positives = 34/57 (59%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPA 311
G A A GA AP+P P +PAPA A +PAPA+A PAPAP PAPAPA
Sbjct: 276 GRSGEAIDALGAHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPA 332
Score = 127 (44.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 35/78 (44%), Positives = 38/78 (48%), Frame = +3
Query: 210 PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGN 389
P+ +PAPA A APAPA A +PAPA AP PAPA PA P N A G N G
Sbjct: 291 PLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPAPP----NKVEALGGNGGT 346
Query: 390 FLTDRPSTKVH*SAIYQG 443
D V I QG
Sbjct: 347 IFDDGAFDHVRKVYIGQG 364
Score = 119 (41.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/36 (63%), Positives = 25/36 (69%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP A PAPA A APAPAPAP+PAPA +PA P
Sbjct: 290 APLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAP 325
Score = 104 (36.6 bits), Expect = 0.0064, P = 0.0064
Identities = 22/36 (61%), Positives = 22/36 (61%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A A AP PA APAPAPAPAPAPA PA P
Sbjct: 284 ALGAHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAP 319
Score = 91 (32.0 bits), Expect = 0.61, P = 0.45
Identities = 22/38 (57%), Positives = 23/38 (60%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGS 344
A A AP PA APAPAPAPAPAPA P+ P S
Sbjct: 284 ALGAHFAPLPAPTPAPAPAPAPAPAPA----PSPAPAS 317
>gi|5913975|dbj|BAA84545.1| (AB032412) myrosinase binding protein [Arabidopsis
thaliana]
Length = 643
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 643
0 150 300 450 600
Plus Strand HSPs:
Score = 135 (47.5 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 30/57 (52%), Positives = 34/57 (59%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPA 311
G A A GA AP+P P +PAPA A +PAPA+A PAPAP PAPAPA
Sbjct: 279 GRSGEAIDALGAHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPA 335
Score = 127 (44.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 35/78 (44%), Positives = 38/78 (48%), Frame = +3
Query: 210 PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGN 389
P+ +PAPA A APAPA A +PAPA AP PAPA PA P N A G N G
Sbjct: 294 PLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPAPP----NKVEALGGNGGT 349
Query: 390 FLTDRPSTKVH*SAIYQG 443
D V I QG
Sbjct: 350 IFDDGAFDHVRKVYIGQG 367
Score = 119 (41.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 23/36 (63%), Positives = 25/36 (69%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP A PAPA A APAPAPAP+PAPA +PA P
Sbjct: 293 APLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAP 328
Score = 104 (36.6 bits), Expect = 0.0064, P = 0.0064
Identities = 22/36 (61%), Positives = 22/36 (61%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A A AP PA APAPAPAPAPAPA PA P
Sbjct: 287 ALGAHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAP 322
Score = 91 (32.0 bits), Expect = 0.61, P = 0.45
Identities = 22/38 (57%), Positives = 23/38 (60%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGS 344
A A AP PA APAPAPAPAPAPA P+ P S
Sbjct: 287 ALGAHFAPLPAPTPAPAPAPAPAPAPA----PSPAPAS 320
>gi|5360792|dbj|BAA82151.1| (AB027252) f-AtMBP [Arabidopsis thaliana]
Length = 646
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | 646
0 150 300 450 600
Plus Strand HSPs:
Score = 135 (47.5 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 30/57 (52%), Positives = 34/57 (59%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPA 311
G A A GA AP+P P +PAPA A +PAPA+A PAPAP PAPAPA
Sbjct: 280 GRSGEAIDALGAHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPA 336
Score = 127 (44.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 35/78 (44%), Positives = 38/78 (48%), Frame = +3
Query: 210 PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGSLKNNYHRADGQNCGN 389
P+ +PAPA A APAPA A +PAPA AP PAPA PA P N A G N G
Sbjct: 295 PLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPTPAPAPAPP----NKVEALGGNGGT 350
Query: 390 FLTDRPSTKVH*SAIYQG 443
D V I QG
Sbjct: 351 IFDDGAFDHVRKVYIGQG 368
Score = 119 (41.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/36 (63%), Positives = 25/36 (69%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
AP A PAPA A APAPAPAP+PAPA +PA P
Sbjct: 294 APLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAP 329
Score = 104 (36.6 bits), Expect = 0.0065, P = 0.0064
Identities = 22/36 (61%), Positives = 22/36 (61%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIP 338
A A AP PA APAPAPAPAPAPA PA P
Sbjct: 288 ALGAHFAPLPAPTPAPAPAPAPAPAPAPSPAPASAP 323
Score = 91 (32.0 bits), Expect = 0.61, P = 0.46
Identities = 22/38 (57%), Positives = 23/38 (60%), Frame = +3
Query: 231 APAAAAAPAPAAAAAPAPAPAPAPAPADKQIPAGIPGS 344
A A AP PA APAPAPAPAPAPA P+ P S
Sbjct: 288 ALGAHFAPLPAPTPAPAPAPAPAPAPA----PSPAPAS 321
>gi|7488496|pir||T08148 proline-rich myrosinase-binding protein homolog - rape
(fragment) >gi|1655830|gb|AAC08051.1| (U59446) myrosinase-binding
protein related protein [Brassica napus]
Length = 552
Frame 3 hits (HSPs): ____________
__________________________________________________
Database sequence: | | | | | 552
0 150 300 450
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 36/88 (40%), Positives = 41/88 (46%), Frame = +3
Query: 156 PASS-ANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQIPA 329
PA + A G+ A AP+P P PAPA A P P+ A P P PAPAPAPA Q P
Sbjct: 308 PAPAPAPGSHPAPAPAPAPAPGQGPRPAPAPGAGPRPSPAPGPGPRPAPAPAPAPGQGPR 367
Query: 330 GIPGSLKNNY-HRADGQNCGNFLTDRPS 410
PG H A G T P+
Sbjct: 368 PAPGPAPGQGPHPAPAAAPGTSATPAPA 395
Score = 127 (44.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 30/67 (44%), Positives = 35/67 (52%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQI 323
G A A GA P+P +P+PA APAPA + PAPAPAPAPAP
Sbjct: 279 GRSADAIDALGAHFGPLRTPAP-----APSPAPGPAPAPAPGSHPAPAPAPAPAPGQGPR 333
Query: 324 PAGIPGS 344
PA PG+
Sbjct: 334 PAPAPGA 340
Score = 113 (39.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 29/72 (40%), Positives = 34/72 (47%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPA--PAPAPAPAPAD 314
G G + A GA + + AP P P +PAPA P PA AP P PAPA AP
Sbjct: 329 GQGPRPAPAPGAGPRPSPAPGPGPRPAPAPAPAPGQGPRPAPGPAPGQGPHPAPAAAPGT 388
Query: 315 KQIPAGIPGSLK 350
PA P + K
Sbjct: 389 SATPAPAPTTTK 400
Score = 107 (37.7 bits), Expect = 0.00042, P = 0.00042
Identities = 28/67 (41%), Positives = 35/67 (52%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSP-PVD--KQSPAPAAAAAPAPAAAAAPAPAPAPAPAPAD 314
G+G S A G + A AP+P P + +P PA P PA AAAP + PAPAP
Sbjct: 339 GAGPRPSPAPGPGPRPAPAPAPAPGQGPRPAPGPAPGQGPHPAPAAAPGTSATPAPAPTT 398
Query: 315 KQI-PAG 332
+I P G
Sbjct: 399 TKIGPVG 405
>gi|123952|sp|Q00650|I3MS_BRANA MICROSPORE-SPECIFIC PROTEIN I3
>gi|99814|pir||S16569 microspore-specific protein I3 - rape
>gi|17823|emb|CAA40608.1| (X57332) I3 product [Brassica napus]
Length = 156
Frame 3 hits (HSPs): ___________________________
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 156
0 50 100 150
__________________
Annotated Domains:
DOMO DM00709: OLEOSIN 15..146
Entrez Domain: 4 X 5 AA REPEATS OF G-T-A-A-A. 24..100
Entrez Repetitive region: 1-1 (APPROXIMATE). 24..28
Entrez Repetitive region: 1-2. 41..45
Entrez Repetitive region: 1-3 (APPROXIMATE). 73..77
Entrez Repetitive region: 1-4 (APPROXIMATE). 96..100
Entrez Domain: 10 X 4 AA TANDEM REPEATS OF A-A- 115..154
Entrez Repetitive region: 2-1. 115..118
Entrez Repetitive region: 2-2 (APPROXIMATE). 119..122
Entrez Repetitive region: 2-3. 123..126
Entrez Repetitive region: 2-4. 127..130
Entrez Repetitive region: 2-5. 131..134
Entrez Repetitive region: 2-6. 135..138
Entrez Repetitive region: 2-7 (APPROXIMATE). 139..142
Entrez Repetitive region: 2-8. 143..146
Entrez Repetitive region: 2-9 (APPROXIMATE). 147..150
Entrez Repetitive region: 2-10 (APPROXIMATE). 151..154
PRODOM PD001837: OLE1(4) OLE3(2) 1..64
PRODOM PD064882: I3MS_BRANA 66..91
PRODOM PD000540: H1(18) O76786(11) TONB(10) 93..154
__________________
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 36/82 (43%), Positives = 45/82 (54%), Frame = +3
Query: 99 GVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAA--AAPAPAAAA 272
G++A GG+ + + AS+ GA AS+P + K P AAA AAPA A AA
Sbjct: 73 GLAAAGGRCDCCHHHPVALQASNGQGA----ASSPVKVLKKIIPGAAAAPRAAPAAAPAA 128
Query: 273 APAPAPAPAPAPADKQIPAGIPGS 344
APA APA APAP PA P +
Sbjct: 129 APAAAPAAAPAPKPAAAPAPKPAA 152
Score = 117 (41.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 32/82 (39%), Positives = 41/82 (50%), Frame = +3
Query: 99 GVSAGGGQSSLDYLFGSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAA--A 272
G++A GG+ + + AS+ GA + + + AP AA A APAAA A
Sbjct: 73 GLAAAGGRCDCCHHHPVALQASNGQGAASSPVKVLKKIIPGAAAAPRAAPAAAPAAAPAA 132
Query: 273 APAPAPAPAPAPADKQIPAGIP 338
APA APAP PA A PA P
Sbjct: 133 APAAAPAPKPAAAPAPKPAAPP 154
Score = 115 (40.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 32/83 (38%), Positives = 42/83 (50%), Frame = +3
Query: 99 GVSAGGGQSSLDYLFGSGVPASSANGARTQNASA-----P-SPPVDKQSPAPAAAAAPAP 260
G++A GG+ + + AS+ GA + P + + +PA A AAAPA
Sbjct: 73 GLAAAGGRCDCCHHHPVALQASNGQGAASSPVKVLKKIIPGAAAAPRAAPAAAPAAAPAA 132
Query: 261 AAAAAPAPAPAPAPAPADKQIPA 329
A AAAPAP PA APAP PA
Sbjct: 133 APAAAPAPKPAAAPAPKPAAPPA 155
>gi|9885221|emb|CAC04229.1| (AL391515) putative acyltransferase [Streptomyces
coelicolor A3(2)]
Length = 417
Frame 3 hits (HSPs): _____________
__________________________________________________
Database sequence: | | | | 417
0 150 300
Plus Strand HSPs:
Score = 132 (46.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 33/68 (48%), Positives = 39/68 (57%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPA-----PAAAAAPAPAPAPAPAPADKQ 320
P + T ASAP+P +PAPA A APA PAA+A PAP PAPAPAP Q
Sbjct: 98 PTPTPTPTPTPTASAPAP-TPAPAPAPAPAPAPAEPFVPPAASAVPAP-PAPAPAPTTPQ 155
Query: 321 IPAGIPGSLK 350
PA P ++
Sbjct: 156 APAPAPAPVR 165
Score = 124 (43.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 30/63 (47%), Positives = 38/63 (60%), Frame = +3
Query: 138 LFGSGVPASSANGARTQNASAPSP-PVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPAD 314
+ G+ A +A A A AP+P P +P P A+A PAP A PAPAPAPAPAPA+
Sbjct: 75 IIGAPDTAPAAPAAPAAPAPAPAPTPTPTPTPTPTASA-PAPTPA--PAPAPAPAPAPAE 131
Query: 315 KQIP 326
+P
Sbjct: 132 PFVP 135
Score = 116 (40.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 25/62 (40%), Positives = 31/62 (50%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQI 323
G+G+ A +AP+ P +P P P P A+A PAP PAPAPAPA
Sbjct: 70 GAGLGIIGAPDTAPAAPAAPAAPAPAPAPTPTPTPTPTPTASA-PAPTPAPAPAPAPAPA 128
Query: 324 PA 329
PA
Sbjct: 129 PA 130
Score = 97 (34.1 bits), Expect = 0.050, P = 0.049
Identities = 30/63 (47%), Positives = 34/63 (53%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSP--APAAAAAPAPAAAA-AP----APAPAPAP---A 305
P +SA A AP+P P PAA+A PAP A A AP APAPAPAP A
Sbjct: 108 PTASAPAPTPAPAPAPAPAPAPAEPFVPPAASAVPAPPAPAPAPTTPQAPAPAPAPVRAA 167
Query: 306 PAD 314
PA+
Sbjct: 168 PAE 170
>gi|7480607|pir||T35297 probable dihydrolipoamide S-succinyltransferase (EC
2.3.1.61) SC5F7.20 [similarity] - Streptomyces coelicolor
>gi|5578863|emb|CAB51265.1| (AL096872) putative dihydrolipoamide
succinyltransferase [Streptomyces coelicolor A3(2)]
Length = 590
Frame 3 hits (HSPs): ______ ________
__________________________________________________
Database sequence: | | | | | 590
0 150 300 450
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 34/60 (56%), Positives = 38/60 (63%), Frame = +3
Query: 159 ASSANGARTQNA-SAPSPPVDKQSPAPAAAA-APAPAAAAAPAPAPA-PAPAPADKQIPA 329
A +A A Q A +AP+ P +PAPA AA APAP A AAPAP PA PAPAPA PA
Sbjct: 213 APAAPAAPAQEAPAAPAQPEPTPAPAPAQAAPAPAPQAPAAPAPQPAAPAPAPAPAAAPA 272
Score = 122 (42.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/53 (56%), Positives = 33/53 (62%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPA--AAAAPAPAAAAAPAPAPAPAPAPA 311
PA A A Q P+P + +PAPA A AAPAP AA PAPAPAPA APA
Sbjct: 220 PAQEAPAAPAQPEPTPAPAPAQAAPAPAPQAPAAPAPQPAA-PAPAPAPAAAPA 272
Score = 106 (37.3 bits), Expect = 0.0017, P = 0.0017
Identities = 29/67 (43%), Positives = 34/67 (50%), Frame = +3
Query: 144 GSGVPASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQI 323
G+ + A GA A+AP+ P APAA A P P A APA A APAPAP
Sbjct: 197 GAKLAVIGAAGAAP--AAAPAAPAAPAQEAPAAPAQPEPTPAPAPAQA-APAPAPQAPAA 253
Query: 324 PAGIPGS 344
PA P +
Sbjct: 254 PAPQPAA 260
Score = 93 (32.7 bits), Expect = 0.29, P = 0.25
Identities = 26/65 (40%), Positives = 30/65 (46%), Frame = +3
Query: 147 SGVPAS-SANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAPAPAPAPAPAPADKQI 323
SGV +S T A +D S APAAA AP A PAP PAPA ++
Sbjct: 53 SGVLSSIKVAEDETVEVGAELALIDDGSGAPAAAPAPQAEQVAEPAPEPAPAAPSTEQAA 112
Query: 324 PAGIP 338
PA P
Sbjct: 113 PAPAP 117
Score = 87 (30.6 bits), Expect = 1.8, P = 0.84
Identities = 20/41 (48%), Positives = 24/41 (58%), Frame = +3
Query: 156 PASSANGARTQNASAPSPPVDKQSPAPAAAAAPAPAAAAAP 278
PA +A Q +AP+P +PAPA AAAPA AAA P
Sbjct: 239 PAQAAPAPAPQAPAAPAPQPAAPAPAPAPAAAPAAPAAAQP 279
WARNING: HSPs involving 3089 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.95
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.316 0.131 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.341 0.135 0.537
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.335 0.140 0.456
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.342 0.149 0.526
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.344 0.144 0.626
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.338 0.148 0.509
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 148 147 10. 74 3 12 22 0.093 34
30 0.11 36
+2 0 148 147 10. 74 3 12 22 0.12 33
30 0.11 36
+1 0 149 148 10. 74 3 12 22 0.091 34
30 0.11 36
-1 0 149 148 10. 74 3 12 22 0.091 34
30 0.11 36
-2 0 148 148 10. 74 3 12 22 0.091 34
30 0.11 36
-3 0 148 147 10. 74 3 12 22 0.12 33
30 0.11 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 3139
No. of states in DFA: 584 (58 KB)
Total size of DFA: 207 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 273.60u 1.19s 274.79t Elapsed: 00:00:46
Total cpu time: 273.72u 1.21s 274.93t Elapsed: 00:00:46
Start: Sat Feb 2 06:36:43 2002 End: Sat Feb 2 06:37:29 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000