BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMT2100
(112 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148989494|ref|ZP_01820853.1| 3-phosphoshikimate 1-carbox... 158 1e-37
gi|15901226|ref|NP_345830.1| hypothetical protein SP_1372 [... 154 2e-36
gi|148985676|ref|ZP_01818830.1| prephenate dehydrogenase [S... 154 2e-36
gi|15903273|ref|NP_358823.1| hypothetical protein spr1230 [... 154 2e-36
gi|118138293|pdb|2IAZ|A Chain A, Crystal Structure Of A Con... 149 4e-35
gi|125718276|ref|YP_001035409.1| Conserved uncharacterized ... 132 4e-30
gi|157074469|gb|ABV09152.1| Protein of unknown function (DU... 126 5e-28
gi|81096398|ref|ZP_00874743.1| Protein of unknown function ... 109 4e-23
gi|55820722|ref|YP_139164.1| hypothetical protein stu0643 [... 102 7e-21
gi|24379241|ref|NP_721196.1| hypothetical protein SMU.782 [... 100 2e-20
gi|22537523|ref|NP_688374.1| hypothetical protein SAG1376 [... 97 2e-19
gi|25011488|ref|NP_735883.1| hypothetical protein gbs1446 [... 97 4e-19
gi|76787862|ref|YP_330017.1| hypothetical protein SAK_1409 ... 97 4e-19
gi|77407037|ref|ZP_00784046.1| conserved hypothetical prote... 96 6e-19
gi|19745892|ref|NP_607028.1| hypothetical protein spyM18_08... 91 2e-17
gi|71903271|ref|YP_280074.1| hypothetical cytosolic protein... 91 2e-17
gi|94994109|ref|YP_602207.1| hypothetical cytosolic protein... 91 2e-17
gi|15674853|ref|NP_269027.1| hypothetical protein SPy_0811 ... 91 3e-17
gi|21910081|ref|NP_664349.1| hypothetical protein SpyM3_054... 91 3e-17
gi|77413580|ref|ZP_00789767.1| Unknown [Streptococcus agala... 72 1e-11
gi|69244121|ref|ZP_00602657.1| Protein of unknown function ... 66 7e-10
gi|29375278|ref|NP_814431.1| hypothetical protein EF0681 [E... 63 6e-09
gi|56808724|ref|ZP_00366443.1| COG3679: Uncharacterized con... 60 4e-08
gi|92089225|ref|ZP_01274175.1| Protein of unknown function ... 60 5e-08
gi|148544492|ref|YP_001271862.1| protein of unknown functio... 60 6e-08
gi|104774374|ref|YP_619354.1| hypothetical protein Ldb1541 ... 58 2e-07
gi|16801390|ref|NP_471658.1| hypothetical protein lin2326 [... 56 6e-07
gi|58337854|ref|YP_194439.1| hypothetical protein LBA1592 [... 56 8e-07
gi|116873656|ref|YP_850437.1| hypothetical protein lwe2240 ... 56 8e-07
gi|16804262|ref|NP_465747.1| hypothetical protein lmo2223 [... 55 8e-07
gi|153175488|ref|ZP_01930846.1| hypothetical protein LMIG_0... 55 1e-06
gi|76797189|ref|ZP_00779525.1| Protein of unknown function ... 53 6e-06
>gi|148989494|ref|ZP_01820853.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP6-BS73]
gi|147925037|gb|EDK76118.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP6-BS73]
Length = 112
Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats.
Identities = 107/112 (95%), Positives = 109/112 (97%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYDSANELSRGLR LPEYK VKAAKDAIAADAEASKIFTEY+AFQEEIQ+LAQTGQM
Sbjct: 1 MSNIYDSANELSRGLRGLPEYKTVKAAKDAIAADAEASKIFTEYLAFQEEIQKLAQTGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK
Sbjct: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
>gi|15901226|ref|NP_345830.1| hypothetical protein SP_1372 [Streptococcus pneumoniae TIGR4]
gi|111657080|ref|ZP_01407872.1| hypothetical protein SpneT_02001693 [Streptococcus pneumoniae
TIGR4]
gi|57013260|sp|Q97Q59|Y1372_STRPN UPF0342 protein SP_1372
gi|14972858|gb|AAK75470.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
Length = 112
Score = 154 bits (388), Expect = 2e-36, Method: Composition-based stats.
Identities = 107/112 (95%), Positives = 110/112 (98%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYDSANELSRGLR LPEYKAVKAAKDAIAADAEASKIFT+Y+AFQEEIQ+LAQTGQM
Sbjct: 1 MSNIYDSANELSRGLRGLPEYKAVKAAKDAIAADAEASKIFTDYLAFQEEIQKLAQTGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK
Sbjct: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
>gi|148985676|ref|ZP_01818830.1| prephenate dehydrogenase [Streptococcus pneumoniae SP3-BS71]
gi|147922157|gb|EDK73279.1| prephenate dehydrogenase [Streptococcus pneumoniae SP3-BS71]
Length = 112
Score = 154 bits (388), Expect = 2e-36, Method: Composition-based stats.
Identities = 107/112 (95%), Positives = 110/112 (98%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYDSAN+LSRGLR LPEYKAVKAAKDAIAADAEASKIFTEY+AFQEEIQ+LAQTGQM
Sbjct: 1 MSNIYDSANDLSRGLRGLPEYKAVKAAKDAIAADAEASKIFTEYLAFQEEIQKLAQTGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK
Sbjct: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
>gi|15903273|ref|NP_358823.1| hypothetical protein spr1230 [Streptococcus pneumoniae R6]
gi|116515360|ref|YP_816673.1| hypothetical protein SPD_1206 [Streptococcus pneumoniae D39]
gi|148993070|ref|ZP_01822664.1| prephenate dehydrogenase [Streptococcus pneumoniae SP9-BS68]
gi|148997574|ref|ZP_01825179.1| prephenate dehydrogenase [Streptococcus pneumoniae SP11-BS70]
gi|149002753|ref|ZP_01827679.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP14-BS69]
gi|149007358|ref|ZP_01831016.1| prephenate dehydrogenase [Streptococcus pneumoniae SP18-BS74]
gi|149011607|ref|ZP_01832803.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP19-BS75]
gi|149013243|ref|ZP_01834029.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP19-BS75]
gi|149019325|ref|ZP_01834687.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP23-BS72]
gi|57013238|sp|Q8DPD3|Y1230_STRR6 UPF0342 protein spr1230
gi|122278441|sp|Q04JX5|Y1206_STRP2 UPF0342 protein SPD_1206
gi|15458867|gb|AAL00034.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116075936|gb|ABJ53656.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
gi|147756629|gb|EDK63670.1| prephenate dehydrogenase [Streptococcus pneumoniae SP11-BS70]
gi|147759047|gb|EDK66041.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP14-BS69]
gi|147761162|gb|EDK68130.1| prephenate dehydrogenase [Streptococcus pneumoniae SP18-BS74]
gi|147762994|gb|EDK69939.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP19-BS75]
gi|147764038|gb|EDK70970.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP19-BS75]
gi|147928271|gb|EDK79288.1| prephenate dehydrogenase [Streptococcus pneumoniae SP9-BS68]
gi|147931195|gb|EDK82174.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Streptococcus
pneumoniae SP23-BS72]
Length = 112
Score = 154 bits (388), Expect = 2e-36, Method: Composition-based stats.
Identities = 108/112 (96%), Positives = 110/112 (98%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYDSANELSRGLR LPEYKAVKAAKDAIAADAEASKIFTEY+AFQEEIQ+LAQTGQM
Sbjct: 1 MSNIYDSANELSRGLRGLPEYKAVKAAKDAIAADAEASKIFTEYLAFQEEIQKLAQTGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK
Sbjct: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
>gi|118138293|pdb|2IAZ|A Chain A, Crystal Structure Of A Conserved Hypothetical Protein
Sp1372 From Streptococcus Pneumoniae
gi|118138294|pdb|2IAZ|B Chain B, Crystal Structure Of A Conserved Hypothetical Protein
Sp1372 From Streptococcus Pneumoniae
gi|118138295|pdb|2IAZ|C Chain C, Crystal Structure Of A Conserved Hypothetical Protein
Sp1372 From Streptococcus Pneumoniae
gi|118138296|pdb|2IAZ|D Chain D, Crystal Structure Of A Conserved Hypothetical Protein
Sp1372 From Streptococcus Pneumoniae
Length = 113
Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats.
Identities = 104/110 (94%), Positives = 107/110 (97%)
Query: 3 NIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMPD 62
NIYDSANELSRGLR LPEYKAVKAAKDAIAADAEASKIFT+Y+AFQEEIQ+LAQTGQ PD
Sbjct: 4 NIYDSANELSRGLRGLPEYKAVKAAKDAIAADAEASKIFTDYLAFQEEIQKLAQTGQXPD 63
Query: 63 ASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
ASFQAK EGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK
Sbjct: 64 ASFQAKXEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 113
>gi|125718276|ref|YP_001035409.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
gi|150416273|sp|A3CNV4|Y1465_STRSV UPF0342 protein SSA_1465
gi|125498193|gb|ABN44859.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
Length = 112
Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats.
Identities = 75/112 (66%), Positives = 94/112 (83%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYD ANELSR LRELPEYKAV +K A+ AD+EA IFT+Y+AFQ+E+Q+LAQTGQ+
Sbjct: 1 MSNIYDLANELSRNLRELPEYKAVAESKKAVDADSEAKAIFTDYLAFQQELQQLAQTGQV 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
P Q KM FG++IQGN++LSEFF KQQQL+IYL+DIE+I+F+PV +LLK
Sbjct: 61 PTQEVQDKMTSFGEKIQGNAVLSEFFNKQQQLSIYLADIERIIFDPVQDLLK 112
>gi|157074469|gb|ABV09152.1| Protein of unknown function (DUF964) superfamily [Streptococcus
gordonii str. Challis substr. CH1]
Length = 112
Score = 126 bits (316), Expect = 5e-28, Method: Composition-based stats.
Identities = 69/112 (61%), Positives = 91/112 (81%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYD ANEL+R RELPEYKAV +K AI AD+EA +F +Y+AFQ +IQ+L QTGQM
Sbjct: 1 MSNIYDLANELNRTFRELPEYKAVLESKAAIDADSEAKSLFDDYIAFQGKIQQLMQTGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
P Q +M+ FG++IQ N++++EFFTKQQQL++YLSDIE+IVFEP+ +L+K
Sbjct: 61 PTPELQEEMKSFGEKIQANAIVTEFFTKQQQLSVYLSDIERIVFEPIQDLMK 112
>gi|81096398|ref|ZP_00874743.1| Protein of unknown function DUF964 [Streptococcus suis 89/1591]
gi|146318914|ref|YP_001198626.1| hypothetical protein SSU05_1260 [Streptococcus suis 05ZYH33]
gi|146321122|ref|YP_001200833.1| hypothetical protein SSU98_1275 [Streptococcus suis 98HAH33]
gi|80977537|gb|EAP41075.1| Protein of unknown function DUF964 [Streptococcus suis 89/1591]
gi|145689720|gb|ABP90226.1| Uncharacterized conserved protein [Streptococcus suis 05ZYH33]
gi|145691928|gb|ABP92433.1| Uncharacterized conserved protein [Streptococcus suis 98HAH33]
Length = 112
Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats.
Identities = 57/109 (52%), Positives = 83/109 (76%)
Query: 3 NIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMPD 62
NIYD ANEL R +R LPEYKAV+A K ++ ++EA +I Y++FQ+EIQ Q G++P
Sbjct: 4 NIYDIANELERAIRNLPEYKAVEAVKVSVEGNSEAKEILESYISFQKEIQSKLQAGEIPT 63
Query: 63 ASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELL 111
+ Q KM F K++QGN LL+E+F+KQQQL Y++D+E+I+F+P++ELL
Sbjct: 64 EADQKKMLDFNKKVQGNPLLTEYFSKQQQLGTYVADLERIIFKPLNELL 112
>gi|55820722|ref|YP_139164.1| hypothetical protein stu0643 [Streptococcus thermophilus LMG 18311]
gi|55822613|ref|YP_141054.1| hypothetical protein str0643 [Streptococcus thermophilus CNRZ1066]
gi|116627528|ref|YP_820147.1| hypothetical protein STER_0693 [Streptococcus thermophilus LMD-9]
gi|62511152|sp|Q5M0L7|Y643_STRT1 UPF0342 protein str0643
gi|62511153|sp|Q5M553|Y643_STRT2 UPF0342 protein stu0643
gi|122267874|sp|Q03LH1|Y693_STRTD UPF0342 protein STER_0693
gi|55736707|gb|AAV60349.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55738598|gb|AAV62239.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|116100805|gb|ABJ65951.1| Uncharacterized conserved protein [Streptococcus thermophilus
LMD-9]
Length = 112
Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/110 (51%), Positives = 78/110 (70%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYD ANEL RG+R LPEYK + K+AIA DAEAS +F E+ FQE+ Q G M
Sbjct: 1 MRNIYDLANELERGIRALPEYKNLVEKKEAIATDAEASALFKEFTDFQEDFYAKMQAGTM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
P A QA ++ G++++ N+LL E+ T QQ L++YL+DIE+I+F+P+ EL
Sbjct: 61 PTAEEQAAVQELGQKVEANALLKEYLTAQQSLSVYLNDIERIIFKPLQEL 110
>gi|24379241|ref|NP_721196.1| hypothetical protein SMU.782 [Streptococcus mutans UA159]
gi|57013241|sp|Q8DUV9|Y782_STRMU UPF0342 protein SMU_782
gi|24377155|gb|AAN58502.1|AE014919_10 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 113
Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 77/111 (69%)
Query: 2 LNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMP 61
+N+YD ANEL RG+R LPEY+A+ AK I D EA K++TE+ FQ +IQ L QTGQ P
Sbjct: 3 VNVYDLANELERGIRALPEYQALVQAKAKIDEDEEAKKLWTEFTEFQMKIQGLIQTGQAP 62
Query: 62 DASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
Q +M+ F ++I+ N LL E+ T QQ L +Y++DIE+I+F P+ ++ K
Sbjct: 63 TPEVQTEMQSFNQKIEANPLLKEYATAQQALGVYVNDIERIIFSPLQDIAK 113
>gi|22537523|ref|NP_688374.1| hypothetical protein SAG1376 [Streptococcus agalactiae 2603V/R]
gi|76797695|ref|ZP_00779963.1| Protein of unknown function (DUF964) superfamily [Streptococcus
agalactiae 18RS21]
gi|57013243|sp|Q8DYU7|Y1376_STRA5 UPF0342 protein SAG1376
gi|22534404|gb|AAN00247.1|AE014255_5 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|76586919|gb|EAO63409.1| Protein of unknown function (DUF964) superfamily [Streptococcus
agalactiae 18RS21]
Length = 111
Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 80/111 (72%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M N+YD ANEL R +R LPEY+AV AK AI +DA+A ++ +++A Q ++Q + Q+GQM
Sbjct: 1 MANVYDLANELERAVRALPEYQAVLTAKSAIESDADAQVLWQDFLATQSKVQEMMQSGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELL 111
P Q +M G++I+ N LL +F +QQ+L++Y+SDIEKIVF P+ +L+
Sbjct: 61 PSQEEQDEMSKLGEKIESNDLLKVYFDQQQRLSVYMSDIEKIVFAPMQDLM 111
>gi|25011488|ref|NP_735883.1| hypothetical protein gbs1446 [Streptococcus agalactiae NEM316]
gi|77414948|ref|ZP_00791044.1| Unknown [Streptococcus agalactiae 515]
gi|57013245|sp|Q8E4F5|Y1446_STRA3 UPF0342 protein gbs1446
gi|24413026|emb|CAD47105.1| Unknown [Streptococcus agalactiae NEM316]
gi|77158999|gb|EAO70214.1| Unknown [Streptococcus agalactiae 515]
Length = 111
Score = 96.7 bits (239), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 78/111 (70%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M N+YD ANEL R +R LPEY+AV AK AI DA+A ++ +++A Q ++Q + Q+GQM
Sbjct: 1 MANVYDLANELERAVRALPEYQAVLTAKAAIENDADAQVLWQDFLAAQSKVQEMMQSGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELL 111
P Q +M G++I+ N LL +F QQ+L++Y+SDIEKIVF P+ +L+
Sbjct: 61 PSQEEQDEMSKLGEKIESNDLLKVYFDHQQRLSVYMSDIEKIVFAPMQDLM 111
>gi|76787862|ref|YP_330017.1| hypothetical protein SAK_1409 [Streptococcus agalactiae A909]
gi|77412104|ref|ZP_00788429.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
gi|123601583|sp|Q3K0D6|Y1409_STRA1 UPF0342 protein SAK_1409
gi|76562919|gb|ABA45503.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gi|77161860|gb|EAO72846.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
Length = 111
Score = 96.7 bits (239), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 80/111 (72%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M N+YD ANEL R +R LPEY+AV AK AI +DA+A ++ +++A Q ++Q + Q+GQM
Sbjct: 1 MANVYDLANELERAVRALPEYQAVLTAKAAIESDADAQVLWQDFLATQSKVQEMMQSGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELL 111
P Q +M G++I+ N LL +F +QQ+L++Y+SDIEKIVF P+ +L+
Sbjct: 61 PSQEEQDEMSKLGEKIESNDLLKVYFDQQQRLSVYMSDIEKIVFAPMQDLM 111
>gi|77407037|ref|ZP_00784046.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77408216|ref|ZP_00784960.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|74054327|gb|AAZ95525.1| hypothetical protein [Streptococcus agalactiae]
gi|77173157|gb|EAO76282.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|77174347|gb|EAO77207.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 111
Score = 96.3 bits (238), Expect = 6e-19, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 79/111 (71%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M N+YD ANEL R +R LPEY+AV AK AI DA+A ++ +++A Q ++Q + Q+GQM
Sbjct: 1 MANVYDLANELERAVRALPEYQAVLTAKAAIENDADAQVLWQDFLATQSKVQEMMQSGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELL 111
P Q +M G++I+ N LL +F +QQ+L++Y+SDIEKIVF P+ +L+
Sbjct: 61 PSQEEQDEMSKLGEKIESNDLLKVYFDQQQRLSVYMSDIEKIVFAPMQDLM 111
>gi|19745892|ref|NP_607028.1| hypothetical protein spyM18_0873 [Streptococcus pyogenes MGAS8232]
gi|50913989|ref|YP_059961.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
gi|139474007|ref|YP_001128723.1| hypothetical protein SpyM51181 [Streptococcus pyogenes str.
Manfredo]
gi|57013149|sp|Q5XCT5|Y643_STRP6 UPF0342 protein M6_Spy0643
gi|57013252|sp|Q8P1H4|Y873_STRP8 UPF0342 protein spyM18_0873
gi|150416268|sp|A2RF77|Y1181_STRPG UPF0342 protein SpyM51181
gi|19748045|gb|AAL97527.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|50903063|gb|AAT86778.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
gi|134272254|emb|CAM30506.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
Length = 113
Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 77/109 (70%)
Query: 4 IYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMPDA 63
IYD AN+L R +R LPEY+ V K+AI ADA AS++F E+VA QE+IQ + Q+GQMP A
Sbjct: 5 IYDYANQLERAVRALPEYQKVLEVKEAIQADASASQLFDEFVAMQEKIQGMMQSGQMPTA 64
Query: 64 SFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
Q ++ ++I+ N L +F QQ L++Y+SDIE+IVF P+ +L+K
Sbjct: 65 EEQTSIQELSQKIEANDQLKAYFEAQQALSVYMSDIERIVFAPLKDLVK 113
>gi|71903271|ref|YP_280074.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
gi|94988312|ref|YP_596413.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
gi|94990190|ref|YP_598290.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
gi|94992188|ref|YP_600287.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
gi|123640113|sp|Q48U87|Y605_STRPM UPF0342 protein M28_Spy0605
gi|150416304|sp|Q1JME3|Y681_STRPC UPF0342 protein MGAS9429_Spy0681
gi|150416305|sp|Q1JHJ0|Y681_STRPD UPF0342 protein MGAS10270_Spy0681
gi|150416306|sp|Q1JCG5|Y691_STRPB UPF0342 protein MGAS2096_Spy0691
gi|71802366|gb|AAX71719.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
gi|94541820|gb|ABF31869.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
gi|94543698|gb|ABF33746.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
gi|94545696|gb|ABF35743.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
Length = 113
Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 77/109 (70%)
Query: 4 IYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMPDA 63
IYD AN+L R +R LPEY+ V K+AI ADA AS++F E+VA QE+IQ + Q+GQMP A
Sbjct: 5 IYDYANQLERAVRALPEYQKVLEVKEAIQADASASELFDEFVAMQEKIQGMMQSGQMPTA 64
Query: 64 SFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
Q ++ ++I+ N L +F QQ L++Y+SDIE+IVF P+ +L+K
Sbjct: 65 EEQTSIQELSQKIEANDQLKAYFEAQQALSVYMSDIERIVFAPLKDLVK 113
>gi|94994109|ref|YP_602207.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
gi|150416307|sp|Q1J7B1|Y713_STRPF UPF0342 protein MGAS10750_Spy0713
gi|94547617|gb|ABF37663.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
Length = 113
Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/109 (49%), Positives = 77/109 (70%)
Query: 4 IYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMPDA 63
IYD AN+L R +R LPEY+ V K+AI ADA AS++F E+VA QE+IQ + Q+GQMP A
Sbjct: 5 IYDYANQLERAVRALPEYQKVLEVKEAIQADASASELFDEFVAMQEKIQEMMQSGQMPTA 64
Query: 64 SFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
Q ++ ++I+ N L +F QQ L++Y+SDIE+IVF P+ +L+K
Sbjct: 65 EEQTSIQELSQKIEANDQLKAYFEAQQALSVYMSDIERIVFAPLKDLVK 113
>gi|15674853|ref|NP_269027.1| hypothetical protein SPy_0811 [Streptococcus pyogenes M1 GAS]
gi|71910439|ref|YP_281989.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
gi|57013264|sp|Q9A0E3|Y811_STRP1 UPF0342 protein SPy_0811/M5005_Spy0626
gi|13621988|gb|AAK33748.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71853221|gb|AAZ51244.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
Length = 113
Score = 90.5 bits (223), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/109 (48%), Positives = 76/109 (69%)
Query: 4 IYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMPDA 63
IYD AN+L R +R LPEY+ V K+AI AD AS++F E+VA QE+IQ + Q+GQMP A
Sbjct: 5 IYDYANQLERAVRALPEYQKVLEVKEAIQADVSASELFDEFVAMQEKIQGMMQSGQMPTA 64
Query: 64 SFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
Q ++ ++I+ N L +F QQ L++Y+SDIE+IVF P+ +L+K
Sbjct: 65 EEQTSIQELSQKIEANDQLKAYFEAQQALSVYMSDIERIVFAPLKDLVK 113
>gi|21910081|ref|NP_664349.1| hypothetical protein SpyM3_0545 [Streptococcus pyogenes MGAS315]
gi|28896221|ref|NP_802571.1| hypothetical protein SPs1309 [Streptococcus pyogenes SSI-1]
gi|57013249|sp|Q8K7Z5|Y545_STRP3 UPF0342 protein SpyM3_0545/SPs1309
gi|21904272|gb|AAM79152.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28811472|dbj|BAC64404.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 113
Score = 90.5 bits (223), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/109 (48%), Positives = 76/109 (69%)
Query: 4 IYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMPDA 63
IYD AN+L R +R LPEY+ V K+AI ADA S++F E+VA QE+IQ + Q+GQMP A
Sbjct: 5 IYDYANQLERAVRALPEYQKVLEVKEAIQADASTSQLFDEFVAMQEKIQGMMQSGQMPTA 64
Query: 64 SFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSELLK 112
Q ++ ++I+ N L +F QQ L++Y+SDIE+IVF P+ +L+K
Sbjct: 65 EEQTSIQELSQKIEANDQLKAYFEAQQALSVYMSDIERIVFAPLKDLVK 113
>gi|77413580|ref|ZP_00789767.1| Unknown [Streptococcus agalactiae 515]
gi|77160346|gb|EAO71470.1| Unknown [Streptococcus agalactiae 515]
Length = 90
Score = 71.6 bits (174), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M N+YD ANEL R +R LPEY+AV AK AI DA+A ++ +++A Q ++Q + Q+GQM
Sbjct: 1 MANVYDLANELERAVRALPEYQAVLTAKAAIENDADAQVLWQDFLAAQSKVQEMMQSGQM 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQ 90
P Q +M G++I+ N LL +F QQ
Sbjct: 61 PSQEEQDEMSKLGEKIESNDLLKVYFDHQQ 90
>gi|69244121|ref|ZP_00602657.1| Protein of unknown function DUF964 [Enterococcus faecium DO]
gi|68196578|gb|EAN11004.1| Protein of unknown function DUF964 [Enterococcus faecium DO]
Length = 113
Score = 65.9 bits (159), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 66/110 (60%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYDSAN++ R +RELPE+KA+K A + + A+ EA K+F ++ A Q E+Q +GQ
Sbjct: 1 MSNIYDSANQIEREIRELPEFKALKEAYEKVQANEEAHKLFKDFQAMQIELQEKQMSGQE 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
K + +IQ ++++ K+Q + ++D+ +I+ PV +L
Sbjct: 61 FSDEDAMKAQEMAVKIQSEEVINDLMQKEQGFSTIINDLNRIIMTPVRDL 110
>gi|29375278|ref|NP_814431.1| hypothetical protein EF0681 [Enterococcus faecalis V583]
gi|57013228|sp|Q837Z3|Y681_ENTFA UPF0342 protein EF_0681
gi|29342738|gb|AAO80502.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 113
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 65/110 (59%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M NIYD+AN++ R LREL E+KA++AA + + AD A +F E+ FQ+ +Q G+
Sbjct: 1 MSNIYDTANQIERELRELDEFKALQAAYEEVKADEAAYTLFKEFQGFQQGLQEKQMRGEE 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
K + ++Q ++++E K+Q ++ ++D+ +I+ PV ++
Sbjct: 61 FTDEDAEKAQSIATKVQETAVINELMQKEQAFSLVVNDLNRIIMTPVRDM 110
>gi|56808724|ref|ZP_00366443.1| COG3679: Uncharacterized conserved protein [Streptococcus
pyogenes M49 591]
Length = 78
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 52/74 (70%)
Query: 4 IYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMPDA 63
IYD AN+L R +R LPEY+ V K+AI ADA AS++F E+VA QE+IQ + Q+GQMP A
Sbjct: 5 IYDYANQLERAVRALPEYQKVLEVKEAIQADASASELFDEFVAMQEKIQGMMQSGQMPTA 64
Query: 64 SFQAKMEGFGKQIQ 77
Q ++ ++I+
Sbjct: 65 EEQTSIQELSQKIE 78
>gi|92089225|ref|ZP_01274175.1| Protein of unknown function DUF964 [Lactobacillus reuteri 100-23]
gi|91804030|gb|EAS88879.1| Protein of unknown function DUF964 [Lactobacillus reuteri 100-23]
Length = 123
Score = 59.7 bits (143), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 62/110 (56%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
++NIYD+ANELSR LRE EY+ ++ A +A+ AD++ F ++ Q + Q TGQ
Sbjct: 2 VVNIYDTANELSRQLRETQEYQGLQKAFEALKADSDTFDTFKKFQQAQADAQHKQMTGQQ 61
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
P + ++ K++ G ++ + +++Q+ L + K + P+ +L
Sbjct: 62 PTDNEIKNIQNLAKEVSGKKVVQDLMNQERQVDSMLQQLNKTITSPIQDL 111
>gi|148544492|ref|YP_001271862.1| protein of unknown function DUF964 [Lactobacillus reuteri F275]
gi|148531526|gb|ABQ83525.1| protein of unknown function DUF964 [Lactobacillus reuteri F275]
Length = 123
Score = 59.7 bits (143), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 60/110 (54%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
++NIYD+ANELSR LRE EY+ ++ A +A+ AD + F ++ Q + Q TGQ
Sbjct: 2 VVNIYDTANELSRQLRETQEYQGLQKAFEALKADGDTFDTFKKFQQAQADAQHKQMTGQQ 61
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
P ++ K++ G ++ + +++Q+ L + K + P+ +L
Sbjct: 62 PTDDEIKNIQNLAKEVSGKKVVQDLMNQERQVDSMLQQLNKTITSPIQDL 111
>gi|104774374|ref|YP_619354.1| hypothetical protein Ldb1541 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514471|ref|YP_813377.1| hypothetical protein LBUL_1430 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274797|sp|Q049D3|Y1430_LACDB UPF0342 protein LBUL_1430
gi|122397059|sp|Q1G986|Y1541_LACDA UPF0342 protein Ldb1541
gi|103423455|emb|CAI98341.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093786|gb|ABJ58939.1| hypothetical protein LBUL_1430 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 117
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M+NIYD+AN+L+ LRE ++ A+K A DA+ AD + +F E A Q EI QTG+
Sbjct: 1 MVNIYDTANQLANDLRETQQFLALKEAMDAVKADEGSLALFKELDAAQMEIMEAQQTGKE 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSE 109
Q + +++ N+ L +Q + L+D++K + +P+SE
Sbjct: 61 LTEEQQDHFKSLNERVSQNTTLQSMLLAEQAVYTLLNDVQKNIGQPLSE 109
>gi|16801390|ref|NP_471658.1| hypothetical protein lin2326 [Listeria innocua Clip11262]
gi|57013258|sp|Q929F0|Y2326_LISIN UPF0342 protein lin2326
gi|16414838|emb|CAC97554.1| lin2326 [Listeria innocua]
Length = 117
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 60/109 (55%)
Query: 2 LNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMP 61
+NIYD A++L +G+RE PE+ +++ A + +A+A F + Q IQ TGQ
Sbjct: 3 VNIYDVAHDLDKGIRETPEFISLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQEI 62
Query: 62 DASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
D + +++Q N L+ + K+Q ++ ++D+ +I+ P+ +L
Sbjct: 63 DDETVNVAQQVAQEVQENELIVKLMEKEQAMSTIINDLNRIIMTPLQDL 111
>gi|58337854|ref|YP_194439.1| hypothetical protein LBA1592 [Lactobacillus acidophilus NCFM]
gi|62511189|sp|Q5FIR6|Y1592_LACAC UPF0342 protein LBA1592
gi|58255171|gb|AAV43408.1| hypothetical protein LBA1592 [Lactobacillus acidophilus NCFM]
Length = 116
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 59/110 (53%)
Query: 1 MLNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQM 60
M+NIYDSAN+L+ L + +YKA+ A + DAE++ +F + Q +I + QTGQ
Sbjct: 1 MINIYDSANKLAEDLTQTDQYKALADAVKVVQEDAESAALFKKMDELQTKIMQSQQTGQP 60
Query: 61 PDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
Q + Q+Q N + +Q L L+DI+K +P+++L
Sbjct: 61 LSEEDQQAYKDLNDQVQNNKQIVSLLQTEQSLYELLNDIQKTYSKPINDL 110
>gi|116873656|ref|YP_850437.1| hypothetical protein lwe2240 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123458643|sp|A0AKX6|Y2240_LISW6 UPF0342 protein lwe2240
gi|116742534|emb|CAK21658.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 117
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 60/109 (55%)
Query: 2 LNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMP 61
+NIYD A++L +G+RE PE+ +++ A + +A+A F + Q IQ TGQ
Sbjct: 3 VNIYDLAHDLDKGIRETPEFLSLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQEI 62
Query: 62 DASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
D + +++Q N L+ + K+Q ++ ++D+ +I+ P+ +L
Sbjct: 63 DDETVNVAQEVAQEVQENELIVKLMEKEQAMSTIINDLNRIIMTPLQDL 111
>gi|16804262|ref|NP_465747.1| hypothetical protein lmo2223 [Listeria monocytogenes EGD-e]
gi|46908457|ref|YP_014846.1| hypothetical protein LMOf2365_2256 [Listeria monocytogenes str. 4b
F2365]
gi|47096840|ref|ZP_00234420.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|153168112|ref|ZP_01928143.1| hypothetical protein LMHG_00787 [Listeria monocytogenes FSL N1-017]
gi|153180237|ref|ZP_01933376.1| hypothetical protein LMMG_01015 [Listeria monocytogenes F6900]
gi|153191774|ref|ZP_01938928.1| hypothetical protein LMPG_02168 [Listeria monocytogenes J2818]
gi|153197030|ref|ZP_01941329.1| hypothetical protein LMRG_01609 [Listeria monocytogenes 10403S]
gi|153203339|ref|ZP_01944646.1| hypothetical protein LMSG_02217 [Listeria monocytogenes HPB2262]
gi|57013215|sp|Q71XE2|Y2256_LISMF UPF0342 protein LMOf2365_2256
gi|57013256|sp|Q8Y553|Y2223_LISMO UPF0342 protein lmo2223
gi|16411693|emb|CAD00301.1| lmo2223 [Listeria monocytogenes]
gi|46881728|gb|AAT05023.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
F2365]
gi|47014759|gb|EAL05712.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|127633485|gb|EBA22897.1| hypothetical protein LMRG_01609 [Listeria monocytogenes 10403S]
gi|127764645|gb|EBA25170.1| hypothetical protein LMPG_02168 [Listeria monocytogenes J2818]
gi|133726538|gb|EBA28236.1| hypothetical protein LMHG_00787 [Listeria monocytogenes FSL N1-017]
gi|133732412|gb|EBA34110.1| hypothetical protein LMMG_01015 [Listeria monocytogenes F6900]
gi|133734640|gb|EBA36338.1| hypothetical protein LMSG_02217 [Listeria monocytogenes HPB2262]
Length = 117
Score = 55.5 bits (132), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 60/109 (55%)
Query: 2 LNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMP 61
+NIYD A++L +G+RE PE+ +++ A + +A+A F + Q IQ TGQ
Sbjct: 3 VNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQEI 62
Query: 62 DASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
D + +++Q N L+ + K+Q ++ ++D+ +I+ P+ +L
Sbjct: 63 DDETVDVAQQVAQEVQENELIVKLMEKEQAMSTIINDLNRIIMTPLQDL 111
>gi|153175488|ref|ZP_01930846.1| hypothetical protein LMIG_00873 [Listeria monocytogenes FSL N3-165]
gi|133729407|gb|EBA31105.1| hypothetical protein LMIG_00873 [Listeria monocytogenes FSL N3-165]
Length = 117
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 60/109 (55%)
Query: 2 LNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMP 61
+NIYD A++L +G+RE PE+ +++ A + +A+A F + Q IQ TGQ
Sbjct: 3 VNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFERFRDVQVTIQEKQMTGQEI 62
Query: 62 DASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPVSEL 110
D + +++Q N L+ + K+Q ++ ++D+ +I+ P+ +L
Sbjct: 63 DDETVDVAQQVAQEVQENELIVKLMEKEQAMSTIINDLNRIIMMPLQDL 111
>gi|76797189|ref|ZP_00779525.1| Protein of unknown function DUF964 [Thermoanaerobacter ethanolicus
ATCC 33223]
gi|114845262|ref|ZP_01455678.1| protein of unknown function DUF964 [Thermoanaerobacter ethanolicus
X514]
gi|76587433|gb|EAO63869.1| Protein of unknown function DUF964 [Thermoanaerobacter ethanolicus
ATCC 33223]
gi|114804721|gb|EAU56546.1| protein of unknown function DUF964 [Thermoanaerobacter ethanolicus
X514]
Length = 109
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 56/106 (52%)
Query: 2 LNIYDSANELSRGLRELPEYKAVKAAKDAIAADAEASKIFTEYVAFQEEIQRLAQTGQMP 61
+N+YD A EL+ +R+LPEYKA K A I + + K+ ++ Q EIQ +G+
Sbjct: 1 MNVYDKAYELANAIRQLPEYKAFKGAYQKINENEQNKKMLEDFRKKQLEIQAKELSGEKV 60
Query: 62 DASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIYLSDIEKIVFEPV 107
D + +E + + N +S + + + L + DI KI+ EP+
Sbjct: 61 DPKEKEVLEKLWEILNLNPEISSYLSLEYALGKIMDDILKIIMEPM 106
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.315 0.130 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 331,009,776
Number of Sequences: 5470121
Number of extensions: 10209176
Number of successful extensions: 40280
Number of sequences better than 1.0e-05: 60
Number of HSP's better than 0.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 40228
Number of HSP's gapped (non-prelim): 60
length of query: 112
length of database: 1,894,087,724
effective HSP length: 80
effective length of query: 32
effective length of database: 1,456,478,044
effective search space: 46607297408
effective search space used: 46607297408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 124 (52.4 bits)