BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SSA_0990
(245 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|125717823|ref|YP_001034956.1| hypothetical protein SSA_0... 380 e-104
gi|24379494|ref|NP_721449.1| conserved hypothetical protein... 197 3e-49
gi|56808263|ref|ZP_00366032.1| COG4988: ABC-type transport ... 192 2e-47
gi|94988639|ref|YP_596740.1| hypothetical protein MGAS9429_... 192 2e-47
gi|94990515|ref|YP_598615.1| hypothetical protein MGAS10270... 191 2e-47
gi|71903530|ref|YP_280333.1| hypothetical protein M28_Spy08... 190 8e-47
gi|94994437|ref|YP_602535.1| hypothetical protein MGAS10750... 189 9e-47
gi|15675144|ref|NP_269318.1| hypothetical protein SPy_1172 ... 189 1e-46
gi|77409203|ref|ZP_00785913.1| conserved hypothetical prote... 185 2e-45
gi|22537140|ref|NP_687991.1| hypothetical protein SAG0980 [... 185 3e-45
gi|81096286|ref|ZP_00874633.1| conserved hypothetical prote... 170 6e-41
gi|146320728|ref|YP_001200439.1| hypothetical protein SSU98... 160 8e-38
gi|146318532|ref|YP_001198244.1| hypothetical protein SSU05... 160 9e-38
gi|157074503|gb|ABV09186.1| conserved hypothetical protein ... 157 5e-37
gi|77410229|ref|ZP_00786696.1| conserved hypothetical prote... 132 2e-29
gi|77410205|ref|ZP_00786683.1| conserved hypothetical prote... 113 8e-24
gi|77407547|ref|ZP_00784367.1| conserved hypothetical prote... 86 3e-15
gi|83857088|ref|ZP_00950616.1| hypothetical protein CA2559_... 81 5e-14
gi|11055965|gb|AAG28337.1| SatE [Streptococcus mutans] 79 2e-13
gi|56459681|ref|YP_154962.1| hypothetical protein IL0572 [I... 79 3e-13
gi|86143026|ref|ZP_01061448.1| hypothetical protein MED217_... 75 2e-12
gi|148323308|gb|EDK88558.1| hypothetical protein FNP_0756 [... 74 7e-12
gi|89890808|ref|ZP_01202317.1| conserved hypothetical trans... 73 2e-11
gi|83951974|ref|ZP_00960706.1| hypothetical protein ISM_154... 72 4e-11
gi|19704379|ref|NP_603941.1| hypothetical protein FN1044 [F... 71 5e-11
gi|34763323|ref|ZP_00144279.1| hypothetical protein [Fusoba... 69 2e-10
gi|114563024|ref|YP_750537.1| hypothetical protein Sfri_185... 69 3e-10
gi|92113768|ref|YP_573696.1| hypothetical protein Csal_1644... 68 5e-10
gi|118065994|ref|ZP_01534254.1| conserved hypothetical prot... 68 6e-10
gi|146299967|ref|YP_001194558.1| hypothetical protein Fjoh_... 68 6e-10
gi|113933065|ref|ZP_01418967.1| hypothetical protein CaulDR... 67 1e-09
gi|91216278|ref|ZP_01253245.1| hypothetical protein P700755... 67 1e-09
gi|86132348|ref|ZP_01050943.1| hypothetical protein MED134_... 64 9e-09
gi|126735580|ref|ZP_01751325.1| hypothetical protein RCCS2_... 63 1e-08
gi|88711940|ref|ZP_01106027.1| hypothetical protein FB2170_... 62 3e-08
gi|89211137|ref|ZP_01189513.1| conserved hypothetical prote... 61 5e-08
gi|88795295|ref|ZP_01110994.1| hypothetical protein MADE_19... 61 7e-08
gi|109898087|ref|YP_661342.1| hypothetical protein Patl_176... 60 1e-07
gi|120435865|ref|YP_861551.1| conserved hypothetical protei... 58 5e-07
gi|119471732|ref|ZP_01614092.1| hypothetical protein ATW7_0... 54 7e-06
>gi|125717823|ref|YP_001034956.1| hypothetical protein SSA_0990 [Streptococcus sanguinis SK36]
gi|125497740|gb|ABN44406.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 245
Score = 380 bits (976), Expect = e-104, Method: Composition-based stats.
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MTNFMGFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLL 60
MTNFMGFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLL
Sbjct: 1 MTNFMGFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLL 60
Query: 61 LGLILPNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFL 120
LGLILPNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFL
Sbjct: 61 LGLILPNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFL 120
Query: 121 LGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGETIAGAGAMI 180
LGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGETIAGAGAMI
Sbjct: 121 LGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGETIAGAGAMI 180
Query: 181 GILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLLVY 240
GILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLLVY
Sbjct: 181 GILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLLVY 240
Query: 241 GCLYW 245
GCLYW
Sbjct: 241 GCLYW 245
>gi|24379494|ref|NP_721449.1| conserved hypothetical protein, SatE [Streptococcus mutans UA159]
gi|24377433|gb|AAN58755.1|AE014944_5 conserved hypothetical protein, SatE [Streptococcus mutans UA159]
Length = 245
Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats.
Identities = 132/244 (54%), Positives = 168/244 (68%), Gaps = 6/244 (2%)
Query: 1 MTNFMGFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLL 60
MT S+F NP+L L L+AH LADFQ QSQKMADLKS +LI HL IV LPL+L
Sbjct: 1 MTKLNVISQFLSGNPVLTLLLIAHFLADFQWQSQKMADLKSSNWTYLIRHLIIVALPLIL 60
Query: 61 LGLILPNYLLYFALVWLSHALIDFLKNRLNSSIVRHH--AQKLAFILDQILHLISIFALY 118
L +++P+ L +L++LSH LID K LNS K F++DQ LH+I + Y
Sbjct: 61 LSVVIPHSFLVLSLIFLSHVLIDSGKLLLNSFYKDRSFIKTKAVFLIDQSLHIIMMIIFY 120
Query: 119 FLLGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGED-SGETIAGAG 177
+ I NWLS+ L+ + F L KP+NI+FKLFFSKYQ ++ ETI GAG
Sbjct: 121 QFYTKVSI---NWLSDFQYFLKLMLFLILITKPVNIIFKLFFSKYQVKDNIEDETITGAG 177
Query: 178 AMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVL 237
A IG+LERLIMG+ L+FGQF +IGLVFTAKSIARY+KI+++Q+FAEYYLIGSLFS+I VL
Sbjct: 178 ATIGLLERLIMGIFLLFGQFASIGLVFTAKSIARYDKIAKNQAFAEYYLIGSLFSIICVL 237
Query: 238 LVYG 241
++Y
Sbjct: 238 IIYA 241
>gi|56808263|ref|ZP_00366032.1| COG4988: ABC-type transport system involved in cytochrome bd
biosynthesis, ATPase and permease components
[Streptococcus pyogenes M49 591]
gi|71910705|ref|YP_282255.1| hypothetical protein M5005_Spy_0892 [Streptococcus pyogenes
MGAS5005]
gi|71853487|gb|AAZ51510.1| hypothetical protein M5005_Spy0892 [Streptococcus pyogenes
MGAS5005]
Length = 238
Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 9/235 (3%)
Query: 6 GFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLIL 65
G S + Q P L L L+ HVL+D+QLQSQ++ADLK + + +L HL V +PL+ L LI+
Sbjct: 4 GVSHYLAQTPTLTLFLICHVLSDYQLQSQQVADLKEKHLTYLGYHLIGVSIPLICLTLII 63
Query: 66 PNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHL-ISIFALYFLLGQQ 124
P L LV +SHALID+LK ++ +S+ ++ F+LDQ LH+ IS FA L G
Sbjct: 64 PQAWLMSLLVMISHALIDWLKPKMANSL--KWKREWIFLLDQCLHIAISSFAGLRLAG-- 119
Query: 125 QIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGE-DSGETIAGAGAMIGIL 183
+ +PNWL LM + F L KP NI+FKLFFSKYQ + + +TI GAGA IGIL
Sbjct: 120 -VTLPNWLPISILM--TVLFILLITKPTNIVFKLFFSKYQPDQGEKMDTIIGAGATIGIL 176
Query: 184 ERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLL 238
ER+++G+ +I GQF +IGLVFTAKSIARYNKISES +FAEYYLIGSLFS+++V +
Sbjct: 177 ERIVIGVCMIMGQFASIGLVFTAKSIARYNKISESPAFAEYYLIGSLFSILSVFI 231
>gi|94988639|ref|YP_596740.1| hypothetical protein MGAS9429_Spy1009 [Streptococcus pyogenes
MGAS9429]
gi|94992462|ref|YP_600561.1| hypothetical protein MGAS2096_Spy0965 [Streptococcus pyogenes
MGAS2096]
gi|94542147|gb|ABF32196.1| hypothetical protein MGAS9429_Spy1009 [Streptococcus pyogenes
MGAS9429]
gi|94545970|gb|ABF36017.1| hypothetical protein MGAS2096_Spy0965 [Streptococcus pyogenes
MGAS2096]
Length = 238
Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 9/235 (3%)
Query: 6 GFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLIL 65
G S + Q P L L L+ HVL+D+QLQSQ++ADLK + + +L HL V +PL+ L LI+
Sbjct: 4 GVSHYLAQTPTLTLFLICHVLSDYQLQSQQVADLKEKHLTYLGYHLIGVSIPLICLTLII 63
Query: 66 PNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHL-ISIFALYFLLGQQ 124
P L LV +SHALID+LK ++ +S+ ++ F+LDQ LH+ IS FA L G
Sbjct: 64 PQAWLMSLLVMISHALIDWLKPKMANSL--KWKREWIFLLDQCLHIAISSFAGLRLAG-- 119
Query: 125 QIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGE-DSGETIAGAGAMIGIL 183
+ +PNWL LM + F + KP NI+FKLFFSKYQ + + +TI GAGA IGIL
Sbjct: 120 -VTLPNWLPISILM--TVLFILVITKPTNIVFKLFFSKYQPDQGEKMDTIIGAGATIGIL 176
Query: 184 ERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLL 238
ER+++GL +I GQF +IGLVFTAKSIARYNKISES +FAEYYLIGSLFS+++V +
Sbjct: 177 ERIVIGLCMIMGQFASIGLVFTAKSIARYNKISESPAFAEYYLIGSLFSILSVFI 231
>gi|94990515|ref|YP_598615.1| hypothetical protein MGAS10270_Spy1006 [Streptococcus pyogenes
MGAS10270]
gi|94544023|gb|ABF34071.1| hypothetical protein MGAS10270_Spy1006 [Streptococcus pyogenes
MGAS10270]
Length = 238
Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats.
Identities = 124/235 (52%), Positives = 164/235 (69%), Gaps = 9/235 (3%)
Query: 6 GFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLIL 65
G S + Q P L L L+ HVL+D+QLQSQ++ADLK + + +L HL V +PL+ L LI+
Sbjct: 4 GVSHYLAQTPTLTLFLICHVLSDYQLQSQQVADLKEKHVTYLGYHLIGVSIPLICLTLII 63
Query: 66 PNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHL-ISIFALYFLLGQQ 124
P L LV +SHALID+LK ++ +S+ ++ F+LDQ LH+ IS FA L G
Sbjct: 64 PQAWLMSLLVMISHALIDWLKPQVANSL--KWKREWIFLLDQCLHIAISSFAGLRLAG-- 119
Query: 125 QIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGE-DSGETIAGAGAMIGIL 183
+ +PNWL LM + F L KP NI+FKLFFSKYQ + + +TI GAGA IGIL
Sbjct: 120 -VTLPNWLPIPILM--TVLFILLITKPTNIVFKLFFSKYQPDQGEKMDTIIGAGATIGIL 176
Query: 184 ERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLL 238
ER+++G+ +I GQF +IGLVFTAKSIARYNKISES +FAEYYLIGSLFS+++V +
Sbjct: 177 ERIVIGVCMIMGQFASIGLVFTAKSIARYNKISESPAFAEYYLIGSLFSILSVFI 231
>gi|71903530|ref|YP_280333.1| hypothetical protein M28_Spy0865 [Streptococcus pyogenes MGAS6180]
gi|71802625|gb|AAX71978.1| hypothetical protein M28_Spy0865 [Streptococcus pyogenes MGAS6180]
Length = 238
Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats.
Identities = 123/235 (52%), Positives = 163/235 (69%), Gaps = 9/235 (3%)
Query: 6 GFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLIL 65
G S + Q P L L L+ HVL+D+QLQSQ++ADLK + + +L HL V +PL+ L LI+
Sbjct: 4 GVSHYLAQTPTLTLFLICHVLSDYQLQSQQVADLKEKHLTYLGYHLIGVSIPLICLTLII 63
Query: 66 PNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHL-ISIFALYFLLGQQ 124
P L LV +SHALID+LK ++ +S+ ++ F+LDQ LH+ IS FA L G
Sbjct: 64 PQAWLMSLLVMISHALIDWLKPKMANSL--KWKREWIFLLDQCLHIAISSFAGLRLAG-- 119
Query: 125 QIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGE-DSGETIAGAGAMIGIL 183
+ +PNWL LM + F L KP NI+FKLFFSKYQ + + +TI GAGA IGIL
Sbjct: 120 -VTLPNWLPISILM--TVLFILLITKPTNIVFKLFFSKYQPDQGEKMDTIIGAGATIGIL 176
Query: 184 ERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLL 238
ER+++G+ + GQF +IGLVFTAKSIARYNKISES +FAEYYLIGSLFS+++V +
Sbjct: 177 ERIVIGVCMFMGQFASIGLVFTAKSIARYNKISESPAFAEYYLIGSLFSILSVFI 231
>gi|94994437|ref|YP_602535.1| hypothetical protein MGAS10750_Spy1041 [Streptococcus pyogenes
MGAS10750]
gi|94547945|gb|ABF37991.1| hypothetical protein MGAS10750_Spy1041 [Streptococcus pyogenes
MGAS10750]
Length = 238
Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats.
Identities = 123/235 (52%), Positives = 163/235 (69%), Gaps = 9/235 (3%)
Query: 6 GFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLIL 65
G S + Q P L L L+ HVL+D+QLQSQ++ADLK + + +L HL V +PL+ L LI+
Sbjct: 4 GVSHYLAQTPTLTLFLICHVLSDYQLQSQQVADLKEKHVTYLGYHLIGVSIPLICLTLII 63
Query: 66 PNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHL-ISIFALYFLLGQQ 124
P L LV +SHALID+LK ++ +S+ ++ F+LDQ LH+ IS FA L G
Sbjct: 64 PQAWLMSLLVMISHALIDWLKPKMANSL--KWKREWIFLLDQCLHIAISSFAGLRLAG-- 119
Query: 125 QIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGE-DSGETIAGAGAMIGIL 183
+ +PNWL LM + F L KP NI+FKLFFSKYQ + + +TI GA A IGIL
Sbjct: 120 -VTLPNWLPISILM--TVLFILLITKPTNIVFKLFFSKYQPDQGEKMDTIIGAEATIGIL 176
Query: 184 ERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLL 238
ER+++G+ +I GQF +IGLVFTAKSIARYNKISES +FAEYYLIGSLFS+++V +
Sbjct: 177 ERIVIGVCMIMGQFASIGLVFTAKSIARYNKISESPAFAEYYLIGSLFSILSVFI 231
>gi|15675144|ref|NP_269318.1| hypothetical protein SPy_1172 [Streptococcus pyogenes M1 GAS]
gi|13622305|gb|AAK34039.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
Length = 238
Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats.
Identities = 123/235 (52%), Positives = 163/235 (69%), Gaps = 9/235 (3%)
Query: 6 GFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLIL 65
G S + Q P L L L+ HVL+D+QLQSQ++ADLK + + +L HL V +PL+ L LI+
Sbjct: 4 GVSHYLAQTPTLTLFLICHVLSDYQLQSQQVADLKEKHLTYLGYHLIGVSIPLICLTLII 63
Query: 66 PNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHL-ISIFALYFLLGQQ 124
P L LV +SHALID+LK ++ +S+ ++ F+LDQ LH+ IS FA L G
Sbjct: 64 PQAWLMSLLVMISHALIDWLKPKMANSL--KWKREWIFLLDQCLHIAISSFAGLRLAG-- 119
Query: 125 QIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGE-DSGETIAGAGAMIGIL 183
+ +PNWL LM + F L KP NI+FKLFF KYQ + + +TI GAGA IGIL
Sbjct: 120 -VTLPNWLPISILM--TVLFILLITKPTNIVFKLFFIKYQPDQGEKMDTIIGAGATIGIL 176
Query: 184 ERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLL 238
ER+++G+ +I GQF +IGLVFTAKSIARYNKISES +FAEYYLIGSLFS+++V +
Sbjct: 177 ERIVIGVCMIMGQFASIGLVFTAKSIARYNKISESPAFAEYYLIGSLFSILSVFI 231
>gi|77409203|ref|ZP_00785913.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|77172179|gb|EAO75338.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
Length = 257
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 125/254 (49%), Positives = 153/254 (60%), Gaps = 19/254 (7%)
Query: 8 SEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLILPN 67
S+F NPIL L AH LADFQ QSQ +AD KS L HL IV LPL L +++P
Sbjct: 3 SDFLRDNPILTLLFCAHFLADFQWQSQSLADSKSHSWRGLWRHLLIVFLPLAALMILIPE 62
Query: 68 YLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIP 127
L +W SH +ID +K + H QK AFI+DQ+ H I Y L P
Sbjct: 63 TTLLNLSIWGSHIVIDSIKKLSYPWVEEGHFQKAAFIIDQLAHYTCIIVFYHALPTYLPP 122
Query: 128 VPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQA------------------GEDS 169
L ++ ++ AL F +T KPINI+FK+FF+K+QA ED
Sbjct: 123 NHWLLPIKHFIVIALVFIIIT-KPINIVFKIFFNKFQAKELSSLLTQEKTKIMKEKSEDH 181
Query: 170 GETIAGAGAMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGS 229
ETI GAGAMIG LERLIM + LI GQ+ AIGLVFTAKSIARY+KIS+SQ FAEYYLIGS
Sbjct: 182 EETIEGAGAMIGNLERLIMAILLISGQYAAIGLVFTAKSIARYDKISKSQVFAEYYLIGS 241
Query: 230 LFSMIAVLLVYGCL 243
LFS+I+VL+ + L
Sbjct: 242 LFSIISVLITHWVL 255
>gi|22537140|ref|NP_687991.1| hypothetical protein SAG0980 [Streptococcus agalactiae 2603V/R]
gi|25011020|ref|NP_735415.1| hypothetical protein gbs0967 [Streptococcus agalactiae NEM316]
gi|76787004|ref|YP_329696.1| hypothetical protein SAK_1075 [Streptococcus agalactiae A909]
gi|76797774|ref|ZP_00780040.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|77405711|ref|ZP_00782798.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77411993|ref|ZP_00788322.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
gi|77413613|ref|ZP_00789799.1| conserved hypothetical protein [Streptococcus agalactiae 515]
gi|22534002|gb|AAM99863.1|AE014236_17 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|23095420|emb|CAD46626.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562061|gb|ABA44645.1| membrane protein, putative [Streptococcus agalactiae A909]
gi|76586850|gb|EAO63342.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|77160322|gb|EAO71447.1| conserved hypothetical protein [Streptococcus agalactiae 515]
gi|77161949|gb|EAO72931.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
gi|77175707|gb|EAO78489.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 257
Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 125/254 (49%), Positives = 153/254 (60%), Gaps = 19/254 (7%)
Query: 8 SEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLILPN 67
S+F NPIL L AH LADFQ QSQ +AD KS L HL IV LPL L +++P
Sbjct: 3 SDFLRDNPILTLLFCAHFLADFQWQSQSLADSKSHSWRGLWRHLLIVFLPLAALMILIPE 62
Query: 68 YLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIP 127
L +W SH +ID +K + H QK AFI+DQ+ H I Y L P
Sbjct: 63 TTLLNLSIWGSHIVIDSIKKLSYPWVEEGHFQKAAFIIDQLAHYTCIIVFYHALPTYLPP 122
Query: 128 VPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQA------------------GEDS 169
L ++ ++ AL F +T KPINI+FK+FF+K+QA ED
Sbjct: 123 NHWLLPIKHFIVIALVFIIIT-KPINIVFKIFFNKFQAKELSSLLTQEKTKIMKEKSEDH 181
Query: 170 GETIAGAGAMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGS 229
ETI GAGAMIG LERLIM + LI GQ+ AIGLVFTAKSIARY+KIS+SQ FAEYYLIGS
Sbjct: 182 EETIEGAGAMIGNLERLIMAILLISGQYAAIGLVFTAKSIARYDKISKSQVFAEYYLIGS 241
Query: 230 LFSMIAVLLVYGCL 243
LFS+I+VL+ + L
Sbjct: 242 LFSIISVLITHWLL 255
>gi|81096286|ref|ZP_00874633.1| conserved hypothetical protein, SatE [Streptococcus suis 89/1591]
gi|80977630|gb|EAP41166.1| conserved hypothetical protein, SatE [Streptococcus suis 89/1591]
Length = 246
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 125/237 (52%), Positives = 163/237 (68%), Gaps = 6/237 (2%)
Query: 3 NFMGFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLG 62
+F S + +Q+P+L L+AH L+DF QSQ +AD K + L +HL IV LPLL+L
Sbjct: 2 SFSVISSYLIQHPVLTALLIAHFLSDFTFQSQALADAKKLHLKALFMHLFIVSLPLLILA 61
Query: 63 LILP--NYLLYFALVWLSHALIDFLKNRLNSS-IVRHHAQKLAFILDQILHLISIFALYF 119
L+ P N L+F VWLSH ID++K LN ++ + AF+ DQ+LH+ISI LY
Sbjct: 62 LLTPVQNGDLFFQ-VWLSHLAIDYVKYFLNKHHWIKDSWEAGAFLADQLLHVISIIILYH 120
Query: 120 LLGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGE-TIAGAGA 178
+G W+ YL+LQ LF ++ KP+NILFKL+FSKYQ E E T+ GAGA
Sbjct: 121 TIGVNVASHSLWIEPNYLLLQILFILLIS-KPVNILFKLYFSKYQVAEGEEEQTVTGAGA 179
Query: 179 MIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIA 235
+IG LE LIMG+ L+ GQ+TAIGLVFTAKSIARY+KIS+SQ+FAEYYLIGSLFS+I+
Sbjct: 180 LIGQLECLIMGIFLLLGQYTAIGLVFTAKSIARYDKISKSQAFAEYYLIGSLFSIIS 236
>gi|146320728|ref|YP_001200439.1| hypothetical protein SSU98_0881 [Streptococcus suis 98HAH33]
gi|145691534|gb|ABP92039.1| hypothetical protein SSU98_0881 [Streptococcus suis 98HAH33]
Length = 246
Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 124/237 (52%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 3 NFMGFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLG 62
+F S + +Q+P+L L+AH L+DF QSQ +AD K + L +HL IV +PLL+L
Sbjct: 2 SFSVISSYLIQHPVLTPLLIAHFLSDFTFQSQALADAKKLHLKALFMHLFIVAIPLLILA 61
Query: 63 LIL--PNYLLYFALVWLSHALIDFLKNRLNSS-IVRHHAQKLAFILDQILHLISIFALYF 119
L+ N L+F VWLSH ID++K LN ++ + AF++DQ+LH+ISI LY
Sbjct: 62 LLTPIQNGDLFFQ-VWLSHLAIDYVKYFLNKHHWIKDSWEAGAFLVDQLLHIISIIILYH 120
Query: 120 LLGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGE-TIAGAGA 178
+G W+ YL+LQ LF ++ KP+NILFKL+FSKYQ E E T+ GAGA
Sbjct: 121 TIGVNVASHSLWIEPNYLLLQILFILLIS-KPVNILFKLYFSKYQVAEGEEEQTVTGAGA 179
Query: 179 MIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIA 235
+IG LERLIMG+ L+ GQ+TAIGLVFTAKSIARY+KIS+SQ+FAEYYLIGSLFS+I+
Sbjct: 180 LIGQLERLIMGIFLLLGQYTAIGLVFTAKSIARYDKISKSQAFAEYYLIGSLFSIIS 236
>gi|146318532|ref|YP_001198244.1| hypothetical protein SSU05_0878 [Streptococcus suis 05ZYH33]
gi|145689338|gb|ABP89844.1| hypothetical protein SSU05_0878 [Streptococcus suis 05ZYH33]
Length = 246
Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 124/237 (52%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 3 NFMGFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLG 62
+F S + +Q+P+L L+AH L+DF QSQ +AD K + L +HL IV +PLL+L
Sbjct: 2 SFSVISSYLIQHPVLTALLIAHFLSDFTFQSQALADAKKLHLKALFMHLFIVAIPLLILA 61
Query: 63 LIL--PNYLLYFALVWLSHALIDFLKNRLNSS-IVRHHAQKLAFILDQILHLISIFALYF 119
L+ N L+F VWLSH ID++K LN ++ + AF++DQ+LH+ISI LY
Sbjct: 62 LLTPIQNGDLFFQ-VWLSHLAIDYVKYFLNKHHWIKDSWEAGAFLVDQLLHIISIIILYH 120
Query: 120 LLGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGE-TIAGAGA 178
+G W+ YL+LQ LF ++ KP+NILFKL+FSKYQ E E T+ GAGA
Sbjct: 121 TIGVNVASHSLWIEPNYLLLQILFILLIS-KPVNILFKLYFSKYQVAEGEEEQTVTGAGA 179
Query: 179 MIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIA 235
+IG LERLIMG+ L+ GQ+TAIGLVFTAKSIARY+KIS+SQ+FAEYYLIGSLFS+I+
Sbjct: 180 LIGQLERLIMGIFLLLGQYTAIGLVFTAKSIARYDKISKSQAFAEYYLIGSLFSIIS 236
>gi|157074503|gb|ABV09186.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 235
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 149/224 (66%), Gaps = 8/224 (3%)
Query: 16 ILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLILPNYLLYFALV 75
+ VL L+ H+L+D+ QSQKMAD K + + L H+ +V LPL +L +I+P+ +V
Sbjct: 12 LFVLLLICHLLSDYYFQSQKMADRKDKNIRVLAFHILLVGLPLFVLTIIIPSLWWKTFIV 71
Query: 76 WLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPNWLSER 135
+LSHALID+ K L + + F+LDQILHL I+ L + + +P++L
Sbjct: 72 FLSHALIDYFKPILQR--IFKLKVSIIFVLDQILHLAIIYGLSNMNTEF---LPSFLPLT 126
Query: 136 YLMLQALFFFALTGKPINILFKLFFSKYQAGED-SGETIAGAGAMIGILERLIMGLSLIF 194
+L +A+ F L GKP NI F++ F K+Q +TI GAGAMIG LERL++G L++
Sbjct: 127 FL--KAVLFVLLVGKPTNIAFRILFGKFQPETSLELDTIDGAGAMIGFLERLVIGACLLY 184
Query: 195 GQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLL 238
GQF +IGLVFTAKSIARYNKISES +FAEYYLIGSL S+++ LL
Sbjct: 185 GQFASIGLVFTAKSIARYNKISESPAFAEYYLIGSLVSILSALL 228
>gi|77410229|ref|ZP_00786696.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|77171162|gb|EAO74564.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
Length = 171
Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 87/165 (52%), Positives = 106/165 (64%), Gaps = 19/165 (11%)
Query: 97 HAQKLAFILDQILHLISIFALYFLLGQQQIPVPNWLSERYLMLQALFFFALTGKPINILF 156
H QK AFI+DQ+ H I Y L P L ++ ++ AL F +T KPINI+F
Sbjct: 6 HFQKAAFIIDQLAHYTCIIVFYHALPTYLPPNHWLLPIKHFIVIALVFIIIT-KPINIVF 64
Query: 157 KLFFSKYQA------------------GEDSGETIAGAGAMIGILERLIMGLSLIFGQFT 198
K+FF+K+QA ED ETI GAGAMIG LERLIM + LI GQ+
Sbjct: 65 KIFFNKFQAKELSSLLTQEKTKIMKEKSEDHEETIEGAGAMIGNLERLIMAILLISGQYA 124
Query: 199 AIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLLVYGCL 243
AIGLVFTAKSIARY+KIS+SQ FAEYYLIGSLFS+I+VL+ + L
Sbjct: 125 AIGLVFTAKSIARYDKISKSQVFAEYYLIGSLFSIISVLITHWVL 169
>gi|77410205|ref|ZP_00786683.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|77171186|gb|EAO74577.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
Length = 131
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 72/127 (56%), Positives = 90/127 (70%), Gaps = 19/127 (14%)
Query: 135 RYLMLQALFFFALTGKPINILFKLFFSKYQA------------------GEDSGETIAGA 176
++ ++ +L F +T KPINI+FK+FF+K+QA ED ETI GA
Sbjct: 4 KHFIVISLVFIIIT-KPINIVFKIFFNKFQAKELSSLLTQEKTKIMKEKSEDHEETIEGA 62
Query: 177 GAMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAV 236
GAMIG LERLIM + LI GQ+ AIGLVFTAKSIARY+KIS+SQ FAEYYLIGSLFS+I+V
Sbjct: 63 GAMIGNLERLIMAILLISGQYAAIGLVFTAKSIARYDKISKSQVFAEYYLIGSLFSIISV 122
Query: 237 LLVYGCL 243
L+ + L
Sbjct: 123 LITHWVL 129
>gi|77407547|ref|ZP_00784367.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77173844|gb|EAO76893.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 154
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 26 LADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLILPNYLLYFALVWLSHALIDFL 85
LADF QSQ +AD KS L HL IV LPL L +++P L +W SH +ID +
Sbjct: 2 LADFSGQSQSLADSKSHSWRGLWRHLLIVFLPLAALMILIPETTLLNLSIWGSHIVIDSI 61
Query: 86 KNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPNWLSERYLMLQALFFF 145
K + H QK AFI+DQ+ H I Y L P L ++ ++ AL F
Sbjct: 62 KKLSYPWVEEGHFQKAAFIIDQLAHYTCIIVFYHALPTYLPPNHWLLPIKHFIVIALVFI 121
Query: 146 ALTGKPINILFKLFFSKYQAGEDS 169
+T KPINI+FK+FF+K+QA E S
Sbjct: 122 IIT-KPINIVFKIFFNKFQAKELS 144
>gi|83857088|ref|ZP_00950616.1| hypothetical protein CA2559_09828 [Croceibacter atlanticus
HTCC2559]
gi|83848455|gb|EAP86324.1| hypothetical protein CA2559_09828 [Croceibacter atlanticus
HTCC2559]
Length = 238
Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 82/230 (35%), Positives = 124/230 (53%), Gaps = 15/230 (6%)
Query: 17 LVLTLMAHVLADFQLQSQKMA---DLKSRRMNFLILHLGIVLLPLLLLGLILPNYLLYFA 73
L+L L+AH+L DF Q+ ++A + K + +FLI H I +L LL L N+++
Sbjct: 7 LILQLIAHLLTDFVFQNNRLATDKNTKGFKSSFLIWHGLIAILLSWLLSFQL-NFIIGAL 65
Query: 74 LVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFA--LYFLLGQQQIPVPNW 131
L+ +SH +ID K LN+ + AF +DQ LH+I A L F PV N
Sbjct: 66 LIGISHYIIDGCKPFLNN---HKSLGRYAFYIDQFLHIILFIAVSLTFFTLTDFNPVINV 122
Query: 132 LS-ERYLMLQALFFFALTGKPINILFKLFFSKYQ-AGEDSGETIAGAGAMIGILERLIMG 189
++ ++Y++L A F F L KP NI K S ++ + + AG +IGILER+++
Sbjct: 123 IAAKQYIVLTAGFLFIL--KPTNIFIKEMLSTFEIESTPQSQELEKAGRLIGILERILVV 180
Query: 190 LSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLLV 239
+ ++ GQF AIG + AKSI RY ++ EY LIG+ S +LV
Sbjct: 181 IFVLIGQFGAIGFLIAAKSILRYKDTDLLKT--EYVLIGTKLSFGIAVLV 228
>gi|11055965|gb|AAG28337.1| SatE [Streptococcus mutans]
Length = 108
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/91 (54%), Positives = 62/91 (68%)
Query: 1 MTNFMGFSEFFMQNPILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLL 60
MT S+F NP+L L L+AH LADFQ QSQKMADLKS +LI HL IV LPL+L
Sbjct: 1 MTKLNVISQFLSGNPVLTLLLIAHFLADFQWQSQKMADLKSSNWTYLIRHLIIVALPLIL 60
Query: 61 LGLILPNYLLYFALVWLSHALIDFLKNRLNS 91
L +++P+ L +L++LSH LID K LNS
Sbjct: 61 LSVVIPHSFLVLSLIFLSHVLIDSGKLLLNS 91
>gi|56459681|ref|YP_154962.1| hypothetical protein IL0572 [Idiomarina loihiensis L2TR]
gi|56178691|gb|AAV81413.1| Uncharacterized conserved membrane protein [Idiomarina loihiensis
L2TR]
Length = 267
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 30/244 (12%)
Query: 23 AHVLADFQLQ-----SQKMADLKSRRMN----FLILHLGIVLLPLLLLGLILPNYLLYFA 73
AH+ DF Q +K++ +R+ +H G+V+L LL+ + + L+ A
Sbjct: 13 AHIAGDFYCQPDYLVGKKLSSSFRKRLYANAIHAFIHAGLVVLLLLIPKMSWDDLLVTTA 72
Query: 74 LVWLSHALIDFLKN----------------RLNSSIVRHHAQKLAFILDQILHLISIFAL 117
++ ++H +ID LK+ S + + F+LDQ+ HL I +
Sbjct: 73 VIGVTHFIIDSLKSVAVIKWVDTWEENEQPEEGSKPRKRNRAFYWFVLDQLAHLSVIILI 132
Query: 118 YFLLGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGETIAGAG 177
+ L Q + +LS YL++ + L KP ++L L + E T+ AG
Sbjct: 133 WLGLFQPFSSIVEYLSVEYLVVVISYLLVL--KPTSVLVSLILKLCETREKKDRTLDEAG 190
Query: 178 AMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARY--NKISESQSFAEYYLIGSLFSMIA 235
A+IG +ERL++ ++ GQ+TAIG V AKS+ R+ NK +++ EY L+G+L S
Sbjct: 191 AVIGYIERLVILTLILVGQYTAIGFVIAAKSVLRFGENKGKDTK-LNEYVLLGTLASFAI 249
Query: 236 VLLV 239
VL V
Sbjct: 250 VLFV 253
>gi|86143026|ref|ZP_01061448.1| hypothetical protein MED217_10287 [Flavobacterium sp. MED217]
gi|85830471|gb|EAQ48930.1| hypothetical protein MED217_10287 [Leeuwenhoekiella blandensis
MED217]
Length = 249
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 19/225 (8%)
Query: 21 LMAHVLADFQLQSQKMADLKSR---RMNFLILHLGIVLLPLLLLGLILPNYLLYFALVWL 77
++AH+L DF LQ K + K + + +L+ H+G+ LL LL L Y L ++ L
Sbjct: 9 ILAHILGDFVLQPTKWVNHKLKHGWKSKYLVTHVGVHLLALLFLLQFESKYFLGILVIIL 68
Query: 78 SHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPNWLSERYL 137
+H ID LK + + + +++KL FI DQI HL+ + + F QI + L
Sbjct: 69 THYAIDALKIKYTT---KKNSRKL-FIADQIAHLLVLNLVLFYYTPYQIDFNEIFHPKAL 124
Query: 138 MLQALFFFALTGKPINILFKLFFSKYQAG-------EDSGET-IAGAGAMIGILERLIMG 189
+L L FF IL ++ +Q E S T +AGAG +IGILERL +
Sbjct: 125 LLITLLFFVTY--VAGILMRIALQPWQNAIEPKSKKEGSKSTSLAGAGKIIGILERLFVF 182
Query: 190 LSLIFGQFTAIGLVFTAKSIARYNKISESQS--FAEYYLIGSLFS 232
++ ++AIG + TAKS+ R+ ++E ++ EY LIG+L S
Sbjct: 183 TFILLNTWSAIGFLITAKSVFRFGDLTEGKNRQLTEYVLIGTLLS 227
>gi|148323308|gb|EDK88558.1| hypothetical protein FNP_0756 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 242
Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 72/240 (30%), Positives = 123/240 (51%), Gaps = 29/240 (12%)
Query: 17 LVLTLMAHVLADFQLQSQKMADLKSRRMNFLILH-------LGIVLLPLLLLGLILPNYL 69
+ + + H+LADF Q+ ++ K +++ L+LH IVLLP+L
Sbjct: 3 IAILISIHLLADFLFQTSIYSEKKRKKLKPLLLHCFIYFIVFEIVLLPILQF----KKAF 58
Query: 70 LYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVP 129
L ++ + H I+F KN+L S + Q F ++Q++H + + +Y++ +
Sbjct: 59 LLGMIISVLHFFINFTKNKLEKSFPQRRLQIWIFSINQLIHFVILIGMYYIFNLE----- 113
Query: 130 NWLSERYLMLQA----------LFFFALTGKPINILFKLFFSKYQAGEDSGETIA--GAG 177
N +S Y+ LQA + F++ +P ++ + F+ E + AG
Sbjct: 114 NSVSNLYVKLQAYENFKIIILYISVFSIIFEPASVFIRKLFTSISPKTSPKENLEELKAG 173
Query: 178 AMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVL 237
+IG LER+I+ + L+ QF IG V TAKSIAR+ ++ E ++FAE YLIG+L S + VL
Sbjct: 174 NIIGKLERIIIAILLLNNQFGVIGFVLTAKSIARFKQM-EDKNFAEKYLIGTLTSFLIVL 232
>gi|89890808|ref|ZP_01202317.1| conserved hypothetical transmembrane protein [Flavobacteria
bacterium BBFL7]
gi|89516953|gb|EAS19611.1| conserved hypothetical transmembrane protein [Flavobacteria
bacterium BBFL7]
Length = 235
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 128/228 (56%), Gaps = 11/228 (4%)
Query: 16 ILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLILPNYL-LYFAL 74
+L+ L+AH L DF LQ+ K + HL I + LL L+ N + L++A
Sbjct: 3 LLIKLLIAHFLGDFILQTNSFTK-KKEKYQLKSPHLYIHAIIHGLLALLFLNEIELWWAA 61
Query: 75 VWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPNWLSE 134
+ ++ + +L + ++ + F++DQ+LH++ I +LY ++ Q + LSE
Sbjct: 62 LIITITHLIIDAGKLKLTTKKN--SRWLFLIDQLLHVLVILSLYVIMEQINLLEEITLSE 119
Query: 135 RYLMLQALFFFALTGKPINILFKLFFSKYQAGE-DSG-ETIAGAGAMIGILERLIMGLSL 192
+ F + P+ I+ K+FF++++ E D+G +++ AG IG++ERL++ + +
Sbjct: 120 NTWLFILCSIFLTS--PVGIMLKVFFTRWKLNEKDTGIDSLKNAGKWIGMIERLLVFVFI 177
Query: 193 IFGQFTAIGLVFTAKSIARYNKISESQS--FAEYYLIGSLFSM-IAVL 237
I G F+A+G + TAKS+ R+ +S++++ EY LIG+L S IA+L
Sbjct: 178 ISGNFSAVGFLLTAKSVFRFGDLSKAKNMKLTEYVLIGTLLSFGIAIL 225
>gi|83951974|ref|ZP_00960706.1| hypothetical protein ISM_15465 [Roseovarius nubinhibens ISM]
gi|83836980|gb|EAP76277.1| hypothetical protein ISM_15465 [Roseovarius nubinhibens ISM]
Length = 247
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 83/234 (35%), Positives = 114/234 (48%), Gaps = 26/234 (11%)
Query: 17 LVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLILPNYLLYFALVW 76
L L AHVLAD+ LQ+++M + K + L LH IVL LLL+ LY L+
Sbjct: 5 LALLFFAHVLADYVLQTRRMVETKDKGAT-LALHFLIVLGSLLLIFGQWDAPALY--LLA 61
Query: 77 LSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPN----WL 132
LSH ID +K +L R H ILDQI H+ ++ L P+ WL
Sbjct: 62 LSHIFIDTIKVQLFDDRFRAH------ILDQIAHIATLLITAALAPSLWADAPHAPLTWL 115
Query: 133 SERYLMLQALFFFALTGK-PINILFKLFFSKYQAGEDSGETIAGAGAMIGILER-LIMGL 190
E L+L L + G + L + F + E + +++ G G MIGILER LI GL
Sbjct: 116 PESALLLAGLLYATRAGGFAVGKLMEPF-----SPELTRQSLPGGGQMIGILERGLIFGL 170
Query: 191 SLIFGQFTAIGLVFTAKSIARYNKIS-----ESQSFAEYYLIGSLFSMIAVLLV 239
+I G IG + AKS+ R+ I +S+ AEY +IG+L S L V
Sbjct: 171 -MIAGLPAGIGFLIAAKSVLRFETIQSGGEDDSRQMAEYVIIGTLASFAWALAV 223
>gi|19704379|ref|NP_603941.1| hypothetical protein FN1044 [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714633|gb|AAL95240.1| unknown [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 242
Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 25/247 (10%)
Query: 16 ILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLILPNYLLYFAL- 74
I+ + + AH+LADF Q+ ++ K + + L+LH I + ++ IL F L
Sbjct: 2 IVAILISAHLLADFLFQTSAYSEKKRKILKSLLLHCFIYFIVFEIIFFILFQCEKAFILG 61
Query: 75 --VWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPNWL 132
+ + H LI++ N+L + Q L F +Q++HL+ I ++ L + N+
Sbjct: 62 LIISVLHFLINYTVNKLEKYFPKRRLQLLFFSFNQLIHLVVIVGFFYFLNLE-----NFT 116
Query: 133 SERYLMLQALFFF----------ALTGKPINILFKLFFSKYQAGEDSGETIA--GAGAMI 180
S+ Y+ L+ +F ++ P ++ + F+ + AG +I
Sbjct: 117 SQLYIDLKDCEYFKTFILYVTVFSIILDPASVFIRKLFTSISPKTYPKTNLEELKAGNII 176
Query: 181 GILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFS----MIAV 236
G LER+I+ + L+ QF +G V TAKSIAR+ ++ E++ FAE YLIG+L S +I+V
Sbjct: 177 GKLERIIIAILLLNNQFGIMGFVLTAKSIARFKQM-ENKDFAEKYLIGTLTSFLIALISV 235
Query: 237 LLVYGCL 243
L++ G L
Sbjct: 236 LILKGLL 242
>gi|34763323|ref|ZP_00144279.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887016|gb|EAA24132.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 248
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 16 ILVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLIL---PNYLLYF 72
I+ + + H+LADF QS + + K + FL LH I + +L L L
Sbjct: 8 IVAILISVHLLADFLFQSSAVIERKRQERKFLFLHCFIYFIVFEILFFTLFQCKKAFLLG 67
Query: 73 ALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPNWL 132
++ + H LI+F+KN+L + Q L F+L Q+++++ + +Y++ + N
Sbjct: 68 LIISILHFLINFIKNKLEKKFPQKRLQLLFFLLSQLIYIVMLIGVYYIFNLE-----NLT 122
Query: 133 SERYLMLQA----------LFFFALTGKPINILFKLFF---SKYQAGEDSGETIAGAGAM 179
+ Y+ LQ + F++ P ++ + F S + E + AG +
Sbjct: 123 NNFYIKLQGYENFKTIIFYILIFSIILDPASVFIRKLFISISPKTYTKIYSEELK-AGNI 181
Query: 180 IGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLL 238
IG LER+I+ + L+ QF IG V TAKSIAR+ ++ E++ FAE YLIG+L S + VLL
Sbjct: 182 IGKLERIIIAIFLLNNQFGVIGFVLTAKSIARFKQM-ENRDFAEKYLIGTLTSFLIVLL 239
>gi|114563024|ref|YP_750537.1| hypothetical protein Sfri_1851 [Shewanella frigidimarina NCIMB 400]
gi|114334317|gb|ABI71699.1| conserved hypothetical protein [Shewanella frigidimarina NCIMB 400]
Length = 272
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 41/259 (15%)
Query: 16 ILVLTLMAHVLADFQLQSQKMADLK---SRRMNFLILHLGI----VLLPLLLLGLILPNY 68
+L+ L+ H + DF LQ+ + + K + R L LH + +L+P + LG+ +
Sbjct: 7 VLIPFLLIHTICDFYLQTDRWVEAKKARTYRSPELYLHATLQGVALLVPAMALGIDWRST 66
Query: 69 LLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLA-FILDQILHLISIFALYFLLGQQQIP 127
+ +V +SH +ID K + KLA F++DQ LH+ + A+ F +
Sbjct: 67 VCLIVIVAVSHFIIDLWK------VTTPKGDKLAYFVIDQALHVSVLAAIAFHVADGASI 120
Query: 128 VPNWLSERYL-MLQALFFFALTGKPINILFKLFFSKY---------------------QA 165
ER+ + +F + L KP +I+ +KY +
Sbjct: 121 EAVLQHERFSDGVLVVFAYVLILKPTSIVIGAVLNKYPIVNSAMDTDTDAVTDTDGVAEP 180
Query: 166 GEDSGETIAG---AGAMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISES--QS 220
D ++G G +IG LERL++ ++ G + A+G V AKSI R+ ++++S +S
Sbjct: 181 VSDKTANVSGLVAGGELIGYLERLLILTFMLVGSYAAVGFVLAAKSIFRFGELNQSANRS 240
Query: 221 FAEYYLIGSLFSMIAVLLV 239
EY LIGSL S++ L+
Sbjct: 241 MTEYVLIGSLISVVITTLI 259
>gi|92113768|ref|YP_573696.1| hypothetical protein Csal_1644 [Chromohalobacter salexigens DSM
3043]
gi|91796858|gb|ABE58997.1| conserved hypothetical protein [Chromohalobacter salexigens DSM
3043]
Length = 247
Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 27 ADFQLQSQKMA---DLKSRRMNFLILHLGI----VLLPLLLLGLILPNYLLYFALVWLSH 79
DF LQS ++ R L LH GI L LL+ G + +L A + ++H
Sbjct: 19 GDFLLQSAAWVHDKQVRGHRSTALYLHAGIHGGLACLALLVGGQPVGAAILGAAFITVTH 78
Query: 80 ALIDFLKNRLNSSIVRHHAQKLAFILDQILHL-ISIFALYFLLGQQQ--IPVPNWLSERY 136
ID LK++ S + + FI DQ LH+ + + +L G WL
Sbjct: 79 FGIDVLKSQAPSERIGY------FIADQALHVGVLVLTWLWLTGDAAWLALATGWLLRPE 132
Query: 137 LMLQALFFFALTGKPINILFKLFFSKYQAGEDSGETIAGAGAMIGILERLIMGLSLIFGQ 196
++L AL + + +P +IL + ++ G D+ T+A AGA IG+LER ++ ++ Q
Sbjct: 133 VLLVALAY-GVVMRPFSILIAMIMRRWSHGVDNSGTLADAGARIGMLERFLVLTFVLADQ 191
Query: 197 FTAIGLVFTAKSIARYNKISE--SQSFAEYYLIGSLFS 232
IG + AKS+ R+ + E + EY L+G++ S
Sbjct: 192 LVPIGFLLAAKSVLRFGDLREDRDRKLTEYVLLGTMLS 229
>gi|118065994|ref|ZP_01534254.1| conserved hypothetical protein [Serratia proteamaculans 568]
gi|118019733|gb|EAV33645.1| conserved hypothetical protein [Serratia proteamaculans 568]
Length = 257
Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 26/247 (10%)
Query: 15 PILVLTLMAHVLADFQLQSQKMADLKSRRM---NFLILHL---------GIVLLPLLLLG 62
P+L+ L+AH+LADF LQ + + K R FL+LH + + LL G
Sbjct: 7 PLLIWLLIAHLLADFPLQPRSWVEDKIRHRAGSRFLLLHALLHGVLAAWVVAVFALLYGG 66
Query: 63 LILPNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLG 122
+ L ++ +SH L D LK L + + +Q F+LDQ LHL I L+ LL
Sbjct: 67 ISSAQVLFALLVIAISHWLTDLLKVTLLTRL----SQARGFLLDQGLHLTVIVLLWLLLT 122
Query: 123 QQQIPVPNWLSE---RYLMLQALFFFALTGKPINILFKLFFSKYQ-----AGEDSGETIA 174
+ + + L+ R+ L + L P+ IL +++ + + +++
Sbjct: 123 PNALALISVLASAAARWQSGLLLLAYLLIYMPMGILMGQLLARWTPQMPPSAKADNDSLL 182
Query: 175 GAGAMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKI--SESQSFAEYYLIGSLFS 232
AG IG LER ++ ++ GQ AIG + AKSI R+ + S+ + EY L+G+LFS
Sbjct: 183 RAGKQIGYLERTLILTFVLIGQIPAIGFLLAAKSIFRFGDLRQSDDKMRTEYVLLGTLFS 242
Query: 233 MIAVLLV 239
+++
Sbjct: 243 FTLTIML 249
>gi|146299967|ref|YP_001194558.1| hypothetical protein Fjoh_2211 [Flavobacterium johnsoniae UW101]
gi|146154385|gb|ABQ05239.1| hypothetical protein Fjoh_2211 [Flavobacterium johnsoniae UW101]
Length = 238
Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 18/232 (7%)
Query: 16 ILVLTLMAHVLADFQLQSQK-MADLKSRRMNFLILHLGIVL---LPLLLLGLILPNYLLY 71
+ V + H+L DF Q +AD + ++ + L++ I L L +L G I +++ Y
Sbjct: 3 LFVKLFLGHLLGDFIWQPNSWVADKEIKKHKSIYLYVHIFLHGILAAILAGEI--SFIPY 60
Query: 72 FALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPNW 131
L+ ++H +ID +K + ++ F+ DQI H++ + + FL + +P
Sbjct: 61 AVLIAVTHGIIDLIKLNFQ----KKKNKRTWFVADQIAHILILIGVVFLYENKTVPNFWT 116
Query: 132 LSERYLMLQALFFFALTGKPINILFKLFFSKYQAG---EDSGETIAGAGAMIGILERLIM 188
+E ++ L + L KP +I K S + ++ ++ AG IGILERL +
Sbjct: 117 NNEFWIFLTGIL---LLTKPASIFIKTIISIWAPESKIDNQDNSLIAAGNYIGILERLFV 173
Query: 189 GLSLIFGQFTAIGLVFTAKSIARYNKISESQ--SFAEYYLIGSLFSMIAVLL 238
++ F AIG + AKSI R+ + E++ EY LIG+L S A +L
Sbjct: 174 FGFILTNHFEAIGFLLAAKSIFRFGDLKEAKDRKLTEYVLIGTLISFGAAIL 225
>gi|113933065|ref|ZP_01418967.1| hypothetical protein CaulDRAFT_4589 [Caulobacter sp. K31]
gi|113733286|gb|EAU14354.1| hypothetical protein CaulDRAFT_4589 [Caulobacter sp. K31]
Length = 241
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 17 LVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLLGLILPNYLLYFALVW 76
LV L AHVLADF +Q+ M K +V+L L +G + P L +++
Sbjct: 5 LVALLTAHVLADFLVQTDAMVAAKDTPKGMAQHIACVVILAGLAIGSLNPPVL---GVIF 61
Query: 77 LSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPNWLSERY 136
++H +D K L ++ A L+F LDQ++HL I AL + + + +
Sbjct: 62 ITHLAMDLTKTHL----MQKMAGWLSFTLDQVVHLAVIVALAVIW--PDVARQGFWGQLP 115
Query: 137 LMLQALFFFALT------------GKPINILFKLFFSKYQAGEDSGETIAGAGAMIGILE 184
LQ+L++ L G ++++ + +K ++ + I G G +IG LE
Sbjct: 116 ADLQSLYYSGLIIAAGLTVAVLVGGIVMDMMMRSIVTKIG---ETPKGIDGGGRLIGWLE 172
Query: 185 RLIMGLSLIFGQFTAIGLVFTAKSIARYNKISES--QSFAEYYLIGSLFS 232
R ++ +++GQ +GL+ AKSI R+ I ++ Q+ EY +IG++ S
Sbjct: 173 RALIFFFIVYGQPEGVGLLLGAKSILRFGDIQQAKEQAHTEYVIIGTMLS 222
>gi|91216278|ref|ZP_01253245.1| hypothetical protein P700755_00372 [Psychroflexus torquis ATCC
700755]
gi|91185416|gb|EAS71792.1| hypothetical protein P700755_00372 [Psychroflexus torquis ATCC
700755]
Length = 236
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 75/242 (30%), Positives = 114/242 (47%), Gaps = 26/242 (10%)
Query: 16 ILVLTLMAHVLADFQLQSQKMA---DLKSRRMNFLILHLGIVLLPLLLLGLILPNYLLYF 72
IL+ L+AH L DF LQ+ K + K + +L LH+GI L + + +
Sbjct: 4 ILLQFLLAHFLGDFVLQANKWVKDKEEKGLKSIYLWLHIGIHFLLMFVFTAFKIKLIPVI 63
Query: 73 ALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHL---ISIFALYFLLGQQQIPVP 129
+ SH +ID +K +L + F DQ+LHL + +YF +
Sbjct: 64 VAIGFSHLIIDVIKIKLKHRL----PASYLFFGDQLLHLLILVGALGIYFDI-------- 111
Query: 130 NWLS----ERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGETIAGAGAMIGILER 185
NW+S M+ L F LT IL K+ SK+ GE + AG IGILER
Sbjct: 112 NWISFLNPSEQWMIWILAFIMLTSVSAVIL-KVALSKWDLKTFDGEALEKAGLYIGILER 170
Query: 186 LIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQ--SFAEYYLIGSLFSM-IAVLLVYGC 242
L + ++ + IG + AKSI R++ +S S+ EY LIG+L S +A+++ G
Sbjct: 171 LFIFGFVVMEYWAGIGFLIAAKSIFRFSDLSRSKDRKLTEYVLIGTLLSYGLAIVIALGA 230
Query: 243 LY 244
L+
Sbjct: 231 LW 232
>gi|86132348|ref|ZP_01050943.1| hypothetical protein MED134_04024 [Cellulophaga sp. MED134]
gi|85817267|gb|EAQ38450.1| hypothetical protein MED134_04024 [Dokdonia donghaensis MED134]
Length = 242
Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 23/228 (10%)
Query: 16 ILVLTLMAHVLADFQLQSQKMADLKSR---RMNFLILHLGIVLLPLLLLGL---ILPNYL 69
++ L +AH+LAD+ QS+K A K++ + +L H+ IV + LL LP L
Sbjct: 6 LITLQTIAHLLADYTFQSKKTAKSKAKKGFKSKYLKWHILIVFVCSYLLSFDYRFLPVAL 65
Query: 70 LYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFAL----YFLLGQQQ 125
+ L W+ ID K ++ +S K AF +DQ+LH++ I+AL + L Q Q
Sbjct: 66 IIAGLHWV----IDGFKPQMLAS---KRLYKGAFFIDQLLHIL-IYALVSTAFVQLLQWQ 117
Query: 126 IPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAG-EDSGETIAGAGAMIGILE 184
+ + L +Y+ L A F F KP NIL K F+ + + + + AG +IGI E
Sbjct: 118 PILIDTLHLKYISLVAAFLFCT--KPANILIKEIFTLFSVSFTEKSQDLPNAGRLIGITE 175
Query: 185 RLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFS 232
R ++ + +I GQF+A+G + TAKSI R+ ++ EY LIG++ S
Sbjct: 176 RWLVLVLIIIGQFSAVGFLITAKSILRFKDGDYLKT--EYVLIGTMLS 221
>gi|126735580|ref|ZP_01751325.1| hypothetical protein RCCS2_16931 [Roseobacter sp. CCS2]
gi|126714767|gb|EBA11633.1| hypothetical protein RCCS2_16931 [Roseobacter sp. CCS2]
Length = 233
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 24/225 (10%)
Query: 21 LMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLPLLLL--GLILPNYLLYFALVWLS 78
++AH+LAD+ LQ+ + + K ++ + H+G+V L LL G ILP + L
Sbjct: 9 IVAHLLADYPLQNSWIINNK-KKPAAMAAHIGVVFLLTLLALRGEILPALT-----ITLL 62
Query: 79 HALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLGQQQIPVPN---WLSER 135
H +ID +K + + A++ DQ+ H +I A+ + + P W
Sbjct: 63 HLVIDLIKTHVAPE------RLWAYVADQLAHFATIAAVLWFWPDLALLWPEAGIWTQYL 116
Query: 136 YLMLQALFFFALTGKP-INILFKLFFSKYQAGEDSGETIAGAGAMIGILERLIMGLSLIF 194
+ L G P + +L + F Q G + AG MIG+LER ++ L ++
Sbjct: 117 LAISAGLILCVHAGGPAVGLLMQDFDMMPQQG------LPEAGRMIGLLERALIFLMVLA 170
Query: 195 GQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMIAVLLV 239
GQ IG + AKS+ R++ S+ Q EY +IG+L S LLV
Sbjct: 171 GQPGGIGFLIAAKSVLRFDTASKDQKAGEYVIIGTLASFGWALLV 215
>gi|88711940|ref|ZP_01106027.1| hypothetical protein FB2170_13663 [Flavobacteriales bacterium
HTCC2170]
gi|88709346|gb|EAR01579.1| hypothetical protein FB2170_13663 [Flavobacteriales bacterium
HTCC2170]
Length = 234
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 18/237 (7%)
Query: 16 ILVLTLMAHVLADFQLQSQKMADLKSR---RMNFLILHLGIVLLPLLLLGLILPNYLLYF 72
+ V +AH++ DF LQ + K + +L LH+ ++ + +L L Y
Sbjct: 3 LFVKLFLAHLIGDFLLQPARWVIHKEANKIKSKYLYLHI-VIHFAVTMLLLWDYKYWKLA 61
Query: 73 ALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYF---LLGQQQIPVP 129
++ +SH +ID K N + + F +DQ+ H++ ++ + +LGQ +
Sbjct: 62 LVIAISHYIIDLGKLYSNKLFKK---SAIPFFIDQLFHVVILYICAYYGNVLGQTMSIID 118
Query: 130 NWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGETIAGAGAMIGILERLIMG 189
S + ++ A+ F + I + KL E +++ AG IGI+ERL +
Sbjct: 119 ---SIDWALVTAIVFLSFPSAII--MAKLMEGMSSKIELDHKSLPNAGKYIGIIERLFVL 173
Query: 190 LSLIFGQFTAIGLVFTAKSIARYNKISES--QSFAEYYLIGSLFSMIAVLLVYGCLY 244
+ +I G++ AIGL+ TAKS+ R+N + ES + EY LIG+L S + +V G +Y
Sbjct: 174 IFIILGRWEAIGLLITAKSVFRFNDLKESNNRKLTEYILIGTLLSF-GIAIVTGIIY 229
>gi|89211137|ref|ZP_01189513.1| conserved hypothetical protein [Halothermothrix orenii H 168]
gi|89159233|gb|EAR78905.1| conserved hypothetical protein [Halothermothrix orenii H 168]
Length = 249
Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 31/244 (12%)
Query: 17 LVLTLMAHVLADFQLQSQKMADLKSRRMNFLILHLGIVLLP--LLLLGLILPNYLLYFAL 74
+L +++H++ADF LQ+ + +LK + L G +L L+LL YF L
Sbjct: 4 FLLAVLSHLIADFILQTGYIVNLKRKNRIKGYLTHGFILFTVYLILLSCYGAKTAFYFGL 63
Query: 75 -VWLSHALIDFLKNRL--NSSIVRHHAQKLAFILDQILHLISIFALY------------- 118
V L H ID++K+RL S VR + FI DQ+ HL + L+
Sbjct: 64 WVTLGHITIDWVKDRLVGMGSPVR---DLVLFIGDQLAHLFILLFLWQEFLTQPIKPVFS 120
Query: 119 ----FLLGQQQIPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQAGEDSGETIA 174
L Q +P + E +++ A+F+ T ++ K+ A + + +
Sbjct: 121 PVIELKLESGQFSIPLFTEE--VLVSAIFYLVATFVGGIVVKKILNLVKIAAQQANVKV- 177
Query: 175 GAGAMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQSFAEYYLIGSLFSMI 234
G IG++ER ++ ++FG +++ LV TAKS+AR+ ++ S+ FAEYYL+G+L S
Sbjct: 178 --GYYIGLVERALIVTLVVFGSISSLALVLTAKSLARFERL-RSKDFAEYYLLGTLTSTF 234
Query: 235 AVLL 238
L+
Sbjct: 235 IALV 238
>gi|88795295|ref|ZP_01110994.1| hypothetical protein MADE_19551 [Alteromonas macleodii 'Deep
ecotype']
gi|88773417|gb|EAR04683.1| hypothetical protein MADE_19551 [Alteromonas macleodii 'Deep
ecotype']
Length = 280
Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 44/264 (16%)
Query: 13 QNPILVLTLMAHVLADFQLQSQKMADLKSRRMNF---LILHL-------GIVLLPLLLLG 62
Q +LV L+AH+LADF Q ++ R L +H G VLL LL
Sbjct: 16 QPELLVGLLLAHILADFYFQPFAWVKQRNERHALALPLYIHTLIHGVFAGAVLL-LLSEN 74
Query: 63 LILPNYLLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFALYFLLG 122
+ L + ++ +SH ID +K+ S AF++DQI H++ + ++
Sbjct: 75 ISLTTIGVGAIIIAVSHFKIDVIKSYCVQSTT-------AFVIDQIAHVVVLLGVFLYAT 127
Query: 123 QQQ---IPVPNWLSERYLMLQALFFFALTGKPINILFKLFFSKYQA-------------- 165
Q + LS L++ + L KP +I+ K S + +
Sbjct: 128 DQWQYVLSALRQLSAGDLVITLAYLAVL--KPSSIVIKQLLSPWSSEVLSSNTQTTHPND 185
Query: 166 ----GEDSGETIAGAGAMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQ-- 219
++ +T++ AG IG LER++M ++ QF+AIG + AKSI R+ +++ Q
Sbjct: 186 PPTISTEAQQTLSLAGQRIGYLERVLMLTFVLLNQFSAIGFLIAAKSIFRFGDLTKHQDR 245
Query: 220 SFAEYYLIGSLFSMIAVLLVYGCL 243
EY L+G+ F+ +A+ LV G L
Sbjct: 246 KLTEYVLLGT-FTSVAMTLVIGLL 268
>gi|109898087|ref|YP_661342.1| hypothetical protein Patl_1767 [Pseudoalteromonas atlantica T6c]
gi|109700368|gb|ABG40288.1| conserved hypothetical protein [Pseudoalteromonas atlantica T6c]
Length = 239
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 111/240 (46%), Gaps = 26/240 (10%)
Query: 16 ILVLTLMAHVLADFQLQSQKMADLKSRRM-------NFLILHLGIVLLPLLLLGLILPNY 68
+ +L + AH+L DF +Q ++ ++ H+ ++ + L G +
Sbjct: 3 LFLLMIAAHILGDFYIQKDSWVTCRNNHHFASWGLGKHVLSHVVLLTTAIWLAGFLTAQG 62
Query: 69 LLYFALVWLSHALIDFLKNRLNSSIVRHHAQKLA-FILDQILHLISIFALYFLLGQQQIP 127
+ ++ SH LID K+ + KL+ F+LDQ H++ I AL L I
Sbjct: 63 WIAIVVIGFSHLLIDVWKS--------YQPNKLSYFLLDQFFHIV-IIALA-ALALSGIG 112
Query: 128 VPNWLSERYLMLQALFF-----FALTGKPINILFKLFFSKYQAG-EDSGETIAGAGAMIG 181
+ ++ YL+L+ + + + +P++I + Y A D +A AG IG
Sbjct: 113 LAEIKTQLYLLLKVKYVAITCAYVIACRPVSIAITIALDNYTAQLADKQTGLASAGRWIG 172
Query: 182 ILERLIMGLSLIFGQFTAIGLVFTAKSIARYNKISESQ--SFAEYYLIGSLFSMIAVLLV 239
+ER ++ ++ GQF +G + AK+I R+ +++ + EY ++G+L S LL+
Sbjct: 173 YIERCLIISFVLIGQFAGVGFLLAAKTIFRFGDLTKEKDMKLTEYMMLGTLLSFSCALLL 232
>gi|120435865|ref|YP_861551.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
gi|117578015|emb|CAL66484.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
Length = 244
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 20/229 (8%)
Query: 23 AHVLADFQLQSQKMADLKSR---RMNFLILHLGIV-LLPLLLLGLILPNYLLYFALVWLS 78
AH++ DF LQ K + K + + FL +H I L LL L + Y+ F V ++
Sbjct: 14 AHIITDFVLQPTKWVNHKRKHKGKSKFLYIHAFIAGFLTLLFLAKLEWWYIAVF--VSIT 71
Query: 79 HALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIF-ALYFLLG--QQQIPVPNWLSER 135
H IDF K + ++ F+LDQ+LH+ I A FL+ + +P + L
Sbjct: 72 HFFIDFWKLQFKKDNLK------MFVLDQMLHIFVILLAWIFLIAGFDRILPFISGLFTS 125
Query: 136 YLMLQALFFFALTGKPINILFKLFFSKYQ---AGEDSGETIAGAGAMIGILERLIMGLSL 192
+ L L + + P L ++Q + ++ AG IGI ER+++ +
Sbjct: 126 EVFLALLIGYLIIIFPTGFLIGKATKRWQNEVQDDLKKNSLDAAGRYIGIFERILVLTFI 185
Query: 193 IFGQFTAIGLVFTAKSIARYNKISES--QSFAEYYLIGSLFSMIAVLLV 239
+ F+AIG + AKSI R++ SE+ + EY LIG+L S +L+
Sbjct: 186 LTTNFSAIGFLIAAKSILRFSDKSETGARKQTEYVLIGTLMSFTITILI 234
>gi|119471732|ref|ZP_01614092.1| hypothetical protein ATW7_08776 [Alteromonadales bacterium TW-7]
gi|119445355|gb|EAW26643.1| hypothetical protein ATW7_08776 [Alteromonadales bacterium TW-7]
Length = 251
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 28/248 (11%)
Query: 12 MQNPILVLT--LMAHVLADFQLQSQK-MADLKSRRMNFLILHLGIVLLPLLLLGLILPNY 68
M + IL+LT ++ H+LADF Q + D R L+L ++ L + +
Sbjct: 1 MSSFILLLTALILGHLLADFYWQPMSWVHDRNKRHFRAKKLYLHALIHGLTSFTVFIMWE 60
Query: 69 LLY----FALVWL-------SHALIDFLKNRLNSSIVRHHAQKLAFILDQILHLISIFAL 117
Y F+ V+L +H ID K+ N +V F++DQI HLI I L
Sbjct: 61 YTYGWQEFSRVFLATLTIVVTHYFIDLAKSYSNKGVV-------PFLVDQISHLIIILVL 113
Query: 118 YFLLGQQQIPVPNWLSERYLMLQALFF---FALTGKPINILFKLFFSKYQAG-EDSGETI 173
L + + ++ + + L F + L KP ++L L K E S ++I
Sbjct: 114 AAWLADKN-EFYTLMWKKLVAIDTLIFICSYLLVLKPSSLLIGLILDKMTGNFEASRKSI 172
Query: 174 AGAGAMIGILERLIMGLSLIFGQFTAIGLVFTAKSIARYN--KISESQSFAEYYLIGSLF 231
+G +G+LER+++ ++ G+++ IG + AKSI R+ K +E + +EY ++G+L
Sbjct: 173 VKSGHYLGLLERVLILSFILIGEYSGIGFLIAAKSIFRFGDLKHNEGKGQSEYVMLGTLL 232
Query: 232 SMIAVLLV 239
S+ L +
Sbjct: 233 SVTVTLFI 240
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.333 0.146 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 823,808,028
Number of Sequences: 5470121
Number of extensions: 32365457
Number of successful extensions: 118006
Number of sequences better than 1.0e-05: 47
Number of HSP's better than 0.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 117880
Number of HSP's gapped (non-prelim): 47
length of query: 245
length of database: 1,894,087,724
effective HSP length: 129
effective length of query: 116
effective length of database: 1,188,442,115
effective search space: 137859285340
effective search space used: 137859285340
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 128 (53.9 bits)