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UGID:1761853     UniGene Mm.386774     Mus musculus (mouse)   Tnfaip1 Order cDNA clone, Links
Tumor necrosis factor, alpha-induced protein 1 (endothelial), mRNA (cDNA clone MGC:7242 IMAGE:3484017) (Tnfaip1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_033421.2 tumor necrosis factor, alpha-induced protein 1 M. musculus 100.0 315
NP_066960.1 tumor necrosis factor, alpha-induced protein 1 H. sapiens 99.0 315
NP_001089279.1 hypothetical protein LOC734327 X. laevis 94.4 318
NP_956093.1 tumor necrosis factor, alpha-induced protein 1 (endothelial) D. rerio 81.2 319
NP_610165.1 CG10465 CG10465-PA D. melanogaster 76.2 252

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mammary gland; skin; mixed; uncharacterized tissue; extraembryonic tissue; lung; kidney; connective tissue; pancreas; bone marrow; spleen; muscle; testis; liver; intestine; tongue; thymus; bladder; heart; vagina; spinal cord; dorsal root ganglion; stomach; eye; ovary; adrenal gland; uterus; joint; adipose tissue; pituitary gland; salivary gland; oviduct; fertilized ovum; bone; lymph node; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11 B5|11 45.1 cM
UniSTS entry: Chr 11 D11Seg36
UniSTS entry: Chr 11 (n/a)
UniSTS entry: Chr 11 D11Bhm59
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (31)

AK079869.1 Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430096G11 product:tumor necrosis factor, alpha-induced protein 1 (endothelial), full insert sequence P
AK034305.1 Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330175I17 product:tumor necrosis factor, alpha-induced protein 1 (endothelial), full insert sequence P
AK219473.1 Mus musculus cDNA, clone:Y2G0148J08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK219208.1 Mus musculus cDNA, clone:Y2G0147L23, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK218103.1 Mus musculus cDNA, clone:Y2G0144A07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK217422.1 Mus musculus cDNA, clone:Y2G0141L20, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK216341.1 Mus musculus cDNA, clone:Y2G0138A14, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search P
AK214142.1 Mus musculus cDNA, clone:Y2G0130M17, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK213084.1 Mus musculus cDNA, clone:Y2G0127B16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK209722.1 Mus musculus cDNA, clone:Y2G0116A07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK209682.1 Mus musculus cDNA, clone:Y2G0115N24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK208825.1 Mus musculus cDNA, clone:Y2G0112N23, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK208232.1 Mus musculus cDNA, clone:Y2G0110I08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK207364.1 Mus musculus cDNA, clone:Y2G0107M10, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK206385.1 Mus musculus cDNA, clone:Y2G0104L01, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK204333.1 Mus musculus cDNA, clone:Y1G0148A13, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK202984.1 Mus musculus cDNA, clone:Y1G0143F20, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK198351.1 Mus musculus cDNA, clone:Y1G0127O10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK193229.1 Mus musculus cDNA, clone:Y1G0111I01, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK191820.1 Mus musculus cDNA, clone:Y1G0107B03, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK189734.1 Mus musculus cDNA, clone:Y0G0150E15, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search P
AK177762.1 Mus musculus cDNA, clone:Y0G0104C01, strand:unspecified
AK177755.1 Mus musculus cDNA, clone:Y0G0104B06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search
AK177066.1 Mus musculus cDNA, clone:Y0G0101H15, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000017759, based on BLAT search P
AK168805.1 Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920056A08 product:tumor necrosis factor, alpha-induced protein 1 (endothelial), full insert sequence P
AK168704.1 Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920046G21 product:tumor necrosis factor, alpha-induced protein 1 (endothelial), full insert sequence P
AK168386.1 Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920006F02 product:tumor necrosis factor, alpha-induced protein 1 (endothelial), full insert sequence P
AK147809.1 Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270049I22 product:tumor necrosis factor, alpha-induced protein 1 (endothelial), full insert sequence P
AK172287.1 Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830113F01 product:tumor necrosis factor, alpha-induced protein 1 (endothelial), full insert sequence P
NM_009395.3 Mus musculus tumor necrosis factor, alpha-induced protein 1 (endothelial) (Tnfaip1), mRNA P
BC003906.1 Mus musculus tumor necrosis factor, alpha-induced protein 1 (endothelial), mRNA (cDNA clone MGC:7242 IMAGE:3484017), complete cds PA

EST sequences (10 of 613) [Show all sequences]

CA751331.1 Clone IMAGE:6830913 brain 5' read
CA751640.1 Clone IMAGE:6830053 brain 5' read PM
BY000807.1 Clone 1200014D20 lung 5' read
BY007430.1 Clone G430031O12 embryonic tissue 5' read P
BY020185.1 Clone G830040D05 mammary gland 5' read P
BY020294.1 Clone G830040L24 mammary gland 5' read P
BY023757.1 Clone G930018H24 mammary gland 5' read
BY025725.1 Clone G930033B19 mammary gland 5' read
BY032153.1 Clone I1C0010I17 embryonic tissue 5' read
BY035910.1 Clone I530021I11 extraembryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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