BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KSHV079
(348 letters)
Database: nr
1,463,011 sequences; 469,658,079 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18846044|ref|NP_572130.1| ORF K14; adhesion molecule vAdh hom... 663 0.0
gi|27151646|sp|P88963|OX2V_KSHV OX-2 membrane glycoprotein homol... 524 e-148
gi|30354109|gb|AAH51984.1| Mox2 protein [Mus musculus] 135 1e-30
gi|26006825|sp|O54901|OX2G_MOUSE OX-2 membrane glycoprotein prec... 135 1e-30
gi|7340143|gb|AAF61105.1|AF231126_1 cell surface glycoprotein OX... 134 3e-30
gi|13928702|ref|NP_113706.1| antigen identified by monoclonal an... 131 1e-29
gi|31543263|ref|NP_034948.2| antigen identified by monoclonal an... 129 7e-29
gi|482499|pir||A47639 OX-2 membrane glycoprotein precursor - hum... 124 2e-27
gi|26007018|sp|P41217|OX2G_HUMAN OX-2 membrane glycoprotein prec... 124 2e-27
gi|12002014|gb|AAG43150.1|AF063591_1 brain my033 protein [Homo s... 124 3e-27
gi|15451904|ref|NP_005935.3| OX-2 membrane glycoprotein precurso... 124 3e-27
gi|18653887|ref|NP_570821.1| R15 [Macaca mulatta rhadinovirus] >... 105 9e-22
gi|20894317|ref|XP_156182.1| similar to hypothetical protein FLJ... 74 4e-12
gi|27667900|ref|XP_221461.1| similar to OX-2 membrane glycoprote... 72 9e-12
gi|10312085|gb|AAG16648.1|AAG16648 HVEC cell-cell adhesion molec... 63 6e-09
gi|18202503|sp|Q15223|PVR1_HUMAN Poliovirus receptor related pro... 63 7e-09
gi|11602906|ref|NP_002846.2| poliovirus receptor-related 1 (herp... 63 8e-09
gi|14196222|gb|AAK33124.1| soluble nectin1 gamma [Homo sapiens] 63 8e-09
gi|11096291|gb|AAG30282.1|AF308633_1 herpesvirus entry mediator ... 62 1e-08
gi|18202921|sp|Q9GL76|PVR1_PIG Poliovirus receptor related prote... 62 1e-08
gi|10312086|gb|AAG16649.1|AAG16649 HVEC cell-cell adhesion molec... 62 2e-08
gi|4154346|gb|AAD04944.1| herpesvirus immunoglobulin-like recept... 62 2e-08
gi|1082702|pir||JC4024 poliovirus receptor-related protein precu... 60 6e-08
gi|11096293|gb|AAG30283.1|AF308634_1 herpesvirus entry mediator ... 58 2e-07
gi|10764653|gb|AAG22808.1|AF297665_1 nectin-1 [Mus musculus] 58 2e-07
gi|18203124|sp|Q9JKF6|PVR1_MOUSE Poliovirus receptor related pro... 58 2e-07
gi|8515827|gb|AAF76195.1|AF270977_1 nectin-1 alpha [Mus musculus] 58 2e-07
gi|11496257|ref|NP_067399.1| poliovirus receptor-related 1; nect... 58 2e-07
gi|11096295|gb|AAG30284.1|AF308635_1 herpesvirus entry mediator ... 58 3e-07
gi|25901003|dbj|BAC41265.1| poliovirus receptor related-gene 1 [... 54 3e-06
gi|25901001|dbj|BAC41264.1| poliovirus receptor related-gene 1 [... 53 7e-06
gi|28076965|ref|NP_081790.1| hypothetical protein D7Ertd458e [Mu... 53 7e-06
gi|26347161|dbj|BAC37229.1| unnamed protein product [Mus musculus] 53 7e-06
gi|12644211|sp|P32507|PVR2_MOUSE Poliovirus receptor related pro... 53 8e-06
gi|25900993|dbj|BAC41260.1| poliovirus receptor related-gene 1 [... 53 8e-06
gi|15489125|gb|AAH13673.1| hypothetical protein D7Ertd458e [Mus ... 53 8e-06
gi|11386199|ref|NP_056295.1| nectin 3 [Homo sapiens] >gi|9716665... 53 9e-06
gi|31982077|ref|NP_033016.2| poliovirus receptor-related 2; poli... 53 9e-06
>gi|18846044|ref|NP_572130.1| ORF K14; adhesion molecule vAdh
homolog [Human herpesvirus 8]
gi|1718330|gb|AAC57159.1| ORF K14; adhesion molecule vAdh homolog [Human herpesvirus 8]
gi|1765954|gb|AAB39927.1| membrane glycoprotein OX-2 homolog
gi|5669895|gb|AAD46502.1|AF148805_7 ORF K14 [Human herpesvirus 8]
gi|14039893|gb|AAK53415.1|AF367765_1 K14 [Human herpesvirus 8]
gi|14039897|gb|AAK53417.1|AF367766_1 K14 [Human herpesvirus 8]
Length = 348
Score = 663 bits (1711), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MIHTFFDCPGRRVVEGGVISSYFLIGAPGRTAIKTEEGVSALQNLPPTVLPVAGTGSVVR 60
MIHTFFDCPGRRVVEGGVISSYFLIGAPGRTAIKTEEGVSALQNLPPTVLPVAGTGSVVR
Sbjct: 1 MIHTFFDCPGRRVVEGGVISSYFLIGAPGRTAIKTEEGVSALQNLPPTVLPVAGTGSVVR 60
Query: 61 PVVCAPPWTTPSASRGSMSSLFISLPWVAFIWLALLGAVGGARVQGPMRGSAALTCAITP 120
PVVCAPPWTTPSASRGSMSSLFISLPWVAFIWLALLGAVGGARVQGPMRGSAALTCAITP
Sbjct: 61 PVVCAPPWTTPSASRGSMSSLFISLPWVAFIWLALLGAVGGARVQGPMRGSAALTCAITP 120
Query: 121 RADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDD 180
RADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDD
Sbjct: 121 RADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDD 180
Query: 181 EGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAP 240
EGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAP
Sbjct: 181 EGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAP 240
Query: 241 WNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAH 300
WNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAH
Sbjct: 241 WNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAH 300
Query: 301 DLPAAQGTLAGVAITLVGLFGIFALHHCRRKQGGASPTSDDMDPLSTQ 348
DLPAAQGTLAGVAITLVGLFGIFALHHCRRKQGGASPTSDDMDPLSTQ
Sbjct: 301 DLPAAQGTLAGVAITLVGLFGIFALHHCRRKQGGASPTSDDMDPLSTQ 348
>gi|27151646|sp|P88963|OX2V_KSHV OX-2 membrane glycoprotein homolog
precursor (Viral OX2) (vOX2)
gi|14627175|gb|AAB62632.2| K14, OX-2 membrane glycoprotein homolog, similar to N-CAM [Human
herpesvirus 8]
Length = 271
Score = 524 bits (1350), Expect = e-148
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 78 MSSLFISLPWVAFIWLALLGAVGGARVQGPMRGSAALTCAITPRADIVSVTWQKRQLPGP 137
MSSLFISLPWVAFIWLALLGAVGGARVQGPMRGSAALTCAITPRADIVSVTWQKRQLPGP
Sbjct: 1 MSSLFISLPWVAFIWLALLGAVGGARVQGPMRGSAALTCAITPRADIVSVTWQKRQLPGP 60
Query: 138 VNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGRQVS 197
VNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGRQVS
Sbjct: 61 VNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGRQVS 120
Query: 198 CTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDSDGL 257
CTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDSDGL
Sbjct: 121 CTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDSDGL 180
Query: 258 TVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAHDLPAAQGTLAGVAITLV 317
TVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAHDLPAAQGTLAGVAITLV
Sbjct: 181 TVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAHDLPAAQGTLAGVAITLV 240
Query: 318 GLFGIFALHHCRRKQGGASPTSDDMDPLSTQ 348
GLFGIFALHHCRRKQGGASPTSDDMDPLSTQ
Sbjct: 241 GLFGIFALHHCRRKQGGASPTSDDMDPLSTQ 271
>gi|30354109|gb|AAH51984.1| Mox2 protein [Mus musculus]
Length = 278
Score = 135 bits (339), Expect = 1e-30
Identities = 73/229 (31%), Positives = 116/229 (49%), Gaps = 7/229 (3%)
Query: 82 FISLPWVAFIWLALLGAVGGARVQ-------GPMRGSAALTCAITPRADIVSVTWQKRQL 134
F L + IW A+ A+V+ + +A+L C++ + + VTWQK++
Sbjct: 10 FCHLSTYSLIWGMAAVALSTAQVEVVTQDERKALHTTASLRCSLKTSQEPLIVTWQKKKA 69
Query: 135 PGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGR 194
P N+ TYS ++GVV+Q Y+ + N+T GLWNS++ N ++DEGCY+C+FN+FG +
Sbjct: 70 VSPENMVTYSKTHGVVIQPAYKDRINVTELGLWNSSITFWNTTLEDEGCYMCLFNTFGSQ 129
Query: 195 QVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDS 254
+VS TACL + P H+ N ED +TC AT RP P ++W ++ E S
Sbjct: 130 KVSGTACLTLYVQPIVHLHYNYFEDHLNITCSATARPAPAISWKGTGTGIENSTESHFHS 189
Query: 255 DGLTVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAHDLP 303
+G T +R+ E IC + + I S+ +P
Sbjct: 190 NGTTSVTSILRVKDPKTQVGKEVICQVLYLGNVIDYKQSLDKGFWFSVP 238
>gi|26006825|sp|O54901|OX2G_MOUSE OX-2 membrane glycoprotein
precursor (MRC OX-2 antigen)
gi|2739126|gb|AAC15911.1| MRC OX-2 antigen homolog [Mus musculus]
Length = 278
Score = 135 bits (339), Expect = 1e-30
Identities = 73/229 (31%), Positives = 116/229 (49%), Gaps = 7/229 (3%)
Query: 82 FISLPWVAFIWLALLGAVGGARVQ-------GPMRGSAALTCAITPRADIVSVTWQKRQL 134
F L + IW A+ A+V+ + +A+L C++ + + VTWQK++
Sbjct: 10 FCHLSTYSLIWGMAAVALSTAQVEVVTQDERKALHTTASLRCSLKTSQEPLIVTWQKKKA 69
Query: 135 PGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGR 194
P N+ TYS ++GVV+Q Y+ + N+T GLWNS++ N ++DEGCY+C+FN+FG +
Sbjct: 70 VSPENMVTYSKTHGVVIQPAYKDRINVTELGLWNSSITFWNTTLEDEGCYMCLFNTFGSQ 129
Query: 195 QVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDS 254
+VS TACL + P H+ N ED +TC AT RP P ++W ++ E S
Sbjct: 130 KVSGTACLTLYVQPIVHLHYNYFEDHLNITCSATARPAPAISWKGTGTGIENSTESHFHS 189
Query: 255 DGLTVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAHDLP 303
+G T +R+ E IC + + I S+ +P
Sbjct: 190 NGTTSVTSILRVKDPKTQVGKEVICQVLYLGNVIDYKQSLDKGFWFSVP 238
>gi|7340143|gb|AAF61105.1|AF231126_1 cell surface glycoprotein OX2
[Mus musculus]
Length = 222
Score = 134 bits (336), Expect = 3e-30
Identities = 70/209 (33%), Positives = 111/209 (52%), Gaps = 7/209 (3%)
Query: 82 FISLPWVAFIWLALLGAVGGARVQ-------GPMRGSAALTCAITPRADIVSVTWQKRQL 134
F L + IW A+ A+V+ + +A+L C++ + + VTWQK++
Sbjct: 7 FCHLSTYSLIWGMAAVALSTAQVEVVTQDERKALHTTASLRCSLKTSQEPLIVTWQKKKA 66
Query: 135 PGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGR 194
P N+ TYS ++GVV+Q Y+ + N+T GLWNS++ N ++DEGCY+C+FN+FG +
Sbjct: 67 VSPENMVTYSKTHGVVIQPAYKDRINVTELGLWNSSITFWNTTLEDEGCYMCLFNTFGSQ 126
Query: 195 QVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDS 254
+VS TACL + P H+ N ED +TC AT RP P ++W ++ E S
Sbjct: 127 KVSGTACLTLYVQPIVHLHYNYFEDHLNITCSATARPAPAISWKGTGTGIENSTESHFHS 186
Query: 255 DGLTVAWRTVRLPRGDNTTPSEGICLITW 283
+G T +R+ E IC + +
Sbjct: 187 NGTTSVTSILRVKDPKTQVGKEVICQVLY 215
>gi|13928702|ref|NP_113706.1| antigen identified by monoclonal
antibody MRC OX-2; Cell surface protein (thymocyte,
antigen identified by monoclonal antibody MRC-OX2
[Rattus norvegicus]
gi|129300|sp|P04218|OX2G_RAT OX-2 membrane glycoprotein precursor (MRC OX-2 antigen)
gi|69991|pir||TDRTOX OX-2 membrane glycoprotein precursor - rat
gi|56701|emb|CAA25925.1| MRC OX-2 antigen [Rattus norvegicus]
Length = 278
Score = 131 bits (330), Expect = 1e-29
Identities = 73/229 (31%), Positives = 116/229 (49%), Gaps = 7/229 (3%)
Query: 82 FISLPWVAFIWLALLGAVGGARVQ-------GPMRGSAALTCAITPRADIVSVTWQKRQL 134
F L + +W A+ A+V+ + +A+L C++ + + VTWQK++
Sbjct: 10 FCHLSTYSLLWAIAAVALSTAQVEVVTQDERKLLHTTASLRCSLKTTQEPLIVTWQKKKA 69
Query: 135 PGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGR 194
GP N+ TYS ++GVV+Q Y+ + NIT GL N+++ N +DDEGCY+C+FN FG
Sbjct: 70 VGPENMVTYSKAHGVVIQPTYKDRINITELGLLNTSITFWNTTLDDEGCYMCLFNMFGSG 129
Query: 195 QVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDS 254
+VS TACL + P H+ N ED +TC AT RP P ++W + ++ E + S
Sbjct: 130 KVSGTACLTLYVQPIVHLHYNYFEDHLNITCSATARPAPAISWKGTGSGIENSTESHSHS 189
Query: 255 DGLTVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAHDLP 303
+G T +R+ E IC + + I S+ +P
Sbjct: 190 NGTTSVTSILRVKDPKTQVGKEVICQVLYLGNVIDYKQSLDKGFWFSVP 238
>gi|31543263|ref|NP_034948.2| antigen identified by monoclonal
antibody MRC OX-2; MRC OX-2 [Mus musculus]
gi|2735712|gb|AAB93980.1| cell surface molecule OX-2 [Mus musculus]
Length = 278
Score = 129 bits (324), Expect = 7e-29
Identities = 72/229 (31%), Positives = 113/229 (48%), Gaps = 7/229 (3%)
Query: 82 FISLPWVAFIWLALLGAVGGARVQ-------GPMRGSAALTCAITPRADIVSVTWQKRQL 134
F L + IW A+ A+V+ + +A+L C++ + + VTWQK++
Sbjct: 10 FCHLSTYSLIWGIAAVALSTAQVEVVTQDERKALHTTASLRCSLKTSQEPLIVTWQKKKA 69
Query: 135 PGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGR 194
P N+ TYS ++GVV+Q Y+ + N+T GLWNS++ N + D GCY+C+FN+FG +
Sbjct: 70 VSPENMVTYSKTHGVVIQPAYKDRINVTELGLWNSSITFWNTHIGDGGCYMCLFNTFGSQ 129
Query: 195 QVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDS 254
+VS TACL + P H+ N E +TC AT RP P +TW ++ E S
Sbjct: 130 KVSGTACLTLYVQPIVHLHYNYFEHHLNITCSATARPAPAITWKGTGTGIENSTESHFHS 189
Query: 255 DGLTVAWRTVRLPRGDNTTPSEGICLITWGNESISIPASIQGPLAHDLP 303
+G T +R+ E IC + + I S+ +P
Sbjct: 190 NGTTSVTSILRVKDPKTQVGKEVICQVLYLGNVIDYKQSLDKGFWFSVP 238
>gi|482499|pir||A47639 OX-2 membrane glycoprotein precursor - human
(fragment)
gi|1335216|emb|CAA28943.1| previously MRC OX-2 [Homo sapiens]
Length = 274
Score = 124 bits (312), Expect = 2e-27
Identities = 62/171 (36%), Positives = 96/171 (55%)
Query: 111 SAALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNST 170
+A+L C++ + + VTWQK++ P N+ T+S ++GVV+Q Y+ K NIT GL NST
Sbjct: 42 TASLKCSLQNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNST 101
Query: 171 LVIHNLAVDDEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGR 230
+ N+ ++DEGCY+C+FN+FG ++S TACL V P + +ED +TC AT R
Sbjct: 102 ITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATAR 161
Query: 231 PPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLI 281
P P V W P + ++ + +G T + + N E IC +
Sbjct: 162 PAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQV 212
>gi|26007018|sp|P41217|OX2G_HUMAN OX-2 membrane glycoprotein
precursor (CD200 antigen) (My033 protein)
Length = 278
Score = 124 bits (311), Expect = 2e-27
Identities = 62/170 (36%), Positives = 95/170 (55%)
Query: 112 AALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTL 171
A+L C++ + + VTWQK++ P N+ T+S ++GVV+Q Y+ K NIT GL NST+
Sbjct: 47 ASLKCSLQNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTI 106
Query: 172 VIHNLAVDDEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRP 231
N+ ++DEGCY+C+FN+FG ++S TACL V P + +ED +TC AT RP
Sbjct: 107 TFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARP 166
Query: 232 PPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLI 281
P V W P + ++ + +G T + + N E IC +
Sbjct: 167 APMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQV 216
>gi|12002014|gb|AAG43150.1|AF063591_1 brain my033 protein [Homo
sapiens]
Length = 269
Score = 124 bits (310), Expect = 3e-27
Identities = 62/170 (36%), Positives = 95/170 (55%)
Query: 112 AALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTL 171
A+L C++ + + VTWQK++ P N+ T+S ++GVV+Q Y+ K NIT GL NST+
Sbjct: 47 ASLKCSLQNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTI 106
Query: 172 VIHNLAVDDEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRP 231
N+ ++DEGCY+C+FN+FG ++S TACL V P + +ED +TC AT RP
Sbjct: 107 TFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARP 166
Query: 232 PPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLI 281
P V W P + ++ + +G T + + N E IC +
Sbjct: 167 APMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQV 216
>gi|15451904|ref|NP_005935.3| OX-2 membrane glycoprotein precursor;
MRC OX-2 antigen [Homo sapiens]
gi|18490921|gb|AAH22522.1| antigen identified by monoclonal antibody MRC OX-2 [Homo sapiens]
gi|21411400|gb|AAH31103.1| antigen identified by monoclonal antibody MRC OX-2 [Homo sapiens]
Length = 269
Score = 124 bits (310), Expect = 3e-27
Identities = 62/170 (36%), Positives = 95/170 (55%)
Query: 112 AALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTL 171
A+L C++ + + VTWQK++ P N+ T+S ++GVV+Q Y+ K NIT GL NST+
Sbjct: 47 ASLKCSLQNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTI 106
Query: 172 VIHNLAVDDEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQVNSTEDADTVTCLATGRP 231
N+ ++DEGCY+C+FN+FG ++S TACL V P + +ED +TC AT RP
Sbjct: 107 TFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARP 166
Query: 232 PPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLI 281
P V W P + ++ + +G T + + N E IC +
Sbjct: 167 APMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQV 216
>gi|18653887|ref|NP_570821.1| R15 [Macaca mulatta rhadinovirus]
gi|4494985|gb|AAD21407.1| R15 [Macaca mulatta rhadinovirus 17577]
gi|7330083|gb|AAF60072.1|AF210726_93 N-CAM Ox-2 homolog [Macaca mulatta rhadinovirus 26-95]
Length = 253
Score = 105 bits (263), Expect = 9e-22
Identities = 64/176 (36%), Positives = 89/176 (50%)
Query: 107 PMRGSAALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGL 166
P+ +A+L C +T D++ VTWQK++ P PVNVATYS G VVQ + + +I L
Sbjct: 29 PVHSTASLGCVLTTPHDVLIVTWQKQESPSPVNVATYSSEAGTVVQPPFAGRVDIPEHKL 88
Query: 167 WNSTLVIHNLAVDDEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQVNSTEDADTVTCL 226
+TL N ++DEGCYLCIFN+FG ++S TACL V P + V + + C
Sbjct: 89 TRTTLKFFNATLEDEGCYLCIFNAFGVGKLSGTACLTVYVPLSMSVTFYPPINPTQLVCR 148
Query: 227 ATGRPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLIT 282
A P P+V W S E F +G T+ + D CL+T
Sbjct: 149 AEASPAPSVNWTGVPPELCSEPEVFPRPNGTTLVVGRCNVTSVDPEDLENATCLVT 204
>gi|20894317|ref|XP_156182.1| similar to hypothetical protein
FLJ25124 [Homo sapiens] [Mus musculus]
Length = 1578
Score = 73.9 bits (180), Expect = 4e-12
Identities = 47/157 (29%), Positives = 75/157 (46%), Gaps = 11/157 (7%)
Query: 110 GSAALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNS 169
G+ ++ C T ++ +TWQK Q P N+ TYSH YG + Y ++ + C L S
Sbjct: 725 GNISIFCNFTSLENVEQITWQKIQGSLPQNIGTYSHKYGEKILPPYVNR--LQCKILEPS 782
Query: 170 T--LVIHNLAVDDEGCYLCIFNSF-----GGRQVSCTACLEVTSPPTGHVQVNSTEDADT 222
T + I + +DE CY C+FN+F GG+ +C + V+ T +ED +
Sbjct: 783 TYFMTIQGVTFEDEACYKCLFNTFPHGSHGGQ--TCLTIITVSELVTELRSAPGSEDLHS 840
Query: 223 VTCLATGRPPPNVTWAAPWNNASSTQEQFTDSDGLTV 259
+ C A G+P P ++ + QE F + TV
Sbjct: 841 LLCSAVGKPAPGISVYPSQVTVQAPQEYFAQNANATV 877
Score = 67.0 bits (162), Expect = 5e-10
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 111 SAALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNST 170
+ L C + A+++ +TWQK Q P N+ TYSH+YG + Y ++ S
Sbjct: 211 NVTLFCNFSSLANVLQITWQKIQGSLPHNIGTYSHTYGEKILPPYVNRLQCKTLEPSASF 270
Query: 171 LVIHNLAVDDEGCYLCIFNSF-----GGRQVSCTACLEVTSPPTGHVQVNS--------- 216
+ I + +DE CY C+FN F GG+ +E S + + V+
Sbjct: 271 MTIQGVTFEDEACYKCLFNIFPRGSHGGQTCLTILSIEPLSQGSYYGAVSELVTELQSAP 330
Query: 217 -TEDADTVTCLATGRPPPNVTWAAPWNNASSTQEQFTDSDGLTV 259
+ED ++ C A G+P P ++ + QE F + TV
Sbjct: 331 GSEDLHSLLCSAVGKPAPGISIYPSQVTVQAPQEYFVQNANATV 374
>gi|27667900|ref|XP_221461.1| similar to OX-2 membrane glycoprotein
precursor; MRC OX-2 antigen [Homo sapiens] [Rattus
norvegicus]
Length = 609
Score = 72.4 bits (176), Expect = 9e-12
Identities = 46/155 (29%), Positives = 70/155 (44%), Gaps = 7/155 (4%)
Query: 110 GSAALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNS 169
G+ + C T A++ +TWQK Q P N+ TYSH YG + Y ++ S
Sbjct: 405 GNVTIFCNFTSLANVEQITWQKIQGSLPHNIGTYSHKYGEKILPPYINRLQCKILEPSAS 464
Query: 170 TLVIHNLAVDDEGCYLCIFNSF-----GGRQVSCTACLEVTSPPTGHVQVNSTEDADTVT 224
+ I + +DE CY C+FN+F GG+ +C L V+ T V+ +ED +
Sbjct: 465 FMTIQGVTFEDEACYKCLFNTFPQGSHGGQ--TCLNILTVSELVTELQSVSGSEDLQNLQ 522
Query: 225 CLATGRPPPNVTWAAPWNNASSTQEQFTDSDGLTV 259
C A G+P P ++ QE + TV
Sbjct: 523 CSAVGKPAPGISIYPSQVTVHPAQEYLAQNPNATV 557
>gi|10312085|gb|AAG16648.1|AAG16648 HVEC cell-cell adhesion
molecule/herpesvirus receptor; HveC; PRR; PRR1; HigR;
nectin-1 [Homo sapiens]
Length = 490
Score = 63.2 bits (152), Expect = 6e-09
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 31 PSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 90
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 91 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANG 150
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 151 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 188
>gi|18202503|sp|Q15223|PVR1_HUMAN Poliovirus receptor related
protein 1 precursor (Herpes virus entry mediator C)
(HveC) (Nectin 1) (Herpesvirus Ig-like receptor) (HIgR)
(CD111 antigen)
gi|3242793|gb|AAC23798.1| herpesvirus entry protein C; Nectin-1a [Homo sapiens]
Length = 517
Score = 62.8 bits (151), Expect = 7e-09
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 58 PSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 118 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANG 177
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 178 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 215
>gi|11602906|ref|NP_002846.2| poliovirus receptor-related 1
(herpesvirus entry mediator C; nectin); poliovirus
receptor related; ectodermal dysplasia 4 (Margarita
Island type); poliovirus receptor-like 1; herpesvirus
entry mediator C; nectin; nectin 1 [Homo sapiens]
gi|11558775|emb|CAA53980.2| nectin 1 [Homo sapiens]
Length = 514
Score = 62.8 bits (151), Expect = 8e-09
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 55 PSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 114
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 115 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANG 174
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 175 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 212
>gi|14196222|gb|AAK33124.1| soluble nectin1 gamma [Homo sapiens]
Length = 352
Score = 62.8 bits (151), Expect = 8e-09
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 58 PSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 118 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANG 177
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 178 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 215
>gi|11096291|gb|AAG30282.1|AF308633_1 herpesvirus entry mediator C
[Bos taurus]
Length = 295
Score = 62.4 bits (150), Expect = 1e-08
Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ + GV V YR + P + T+ + L ++
Sbjct: 17 PGVKITQVTWQKATNGSKQNVAIYNPAMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 76
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTG-----HVQVNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT H + + + D TC A G
Sbjct: 77 DEGVYICEFATFPAGNRESQLNLTVMAKPTNWIEGTHAVLRARKGQDEKVLVATCTSANG 136
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 137 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 174
>gi|18202921|sp|Q9GL76|PVR1_PIG Poliovirus receptor related protein
1 precursor (Herpes virus entry mediator C) (HveC)
(Nectin 1)
gi|11096289|gb|AAG30281.1|AF308632_1 herpesvirus entry mediator C [Sus scrofa]
Length = 515
Score = 62.0 bits (149), Expect = 1e-08
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 11/174 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ + GV V YR + P + T+ + L ++
Sbjct: 58 PGVKITQVTWQKATNGSKQNVAIYNPAMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 118 DEGVYICEFATFPAGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGKDDKVLVATCTSANG 177
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLPRGDNTTPSEGICLITW 283
+PP V+W + QE + +TV R +P ++ S C++ +
Sbjct: 178 KPPSVVSWETHLKGEAEYQEIRNPNGTVTVISRYRLVPSREDHRQSLA-CIVNY 230
>gi|10312086|gb|AAG16649.1|AAG16649 HVEC cell-cell adhesion
molecule/herpesvirus receptor; HveC; PRR; PRR1; HigR;
nectin-1 [Homo sapiens]
Length = 431
Score = 62.0 bits (149), Expect = 2e-08
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 31 PSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 90
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 91 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANG 150
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 151 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 188
>gi|4154346|gb|AAD04944.1| herpesvirus immunoglobulin-like receptor
HIgR [Homo sapiens]
Length = 458
Score = 61.6 bits (148), Expect = 2e-08
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 58 PSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 118 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANG 177
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 178 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 215
>gi|1082702|pir||JC4024 poliovirus receptor-related protein
precursor - human
Length = 518
Score = 59.7 bits (143), Expect = 6e-08
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 58 PSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 118 DEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANG 177
Query: 230 RPPPNVTW 237
+PP V+W
Sbjct: 178 KPPSVVSW 185
>gi|11096293|gb|AAG30283.1|AF308634_1 herpesvirus entry mediator C
[Mesocricetus auratus]
Length = 295
Score = 58.2 bits (139), Expect = 2e-07
Identities = 44/158 (27%), Positives = 66/158 (40%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK N+A Y+ + GV V Y + P + T+ + +L ++
Sbjct: 17 PSVKITQVTWQKATNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSHLELE 76
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-------VNSTEDADTV--TCL-ATG 229
DEG Y+C F +F L V + PT ++ +D V TC A G
Sbjct: 77 DEGMYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRARKGQDDKVVVATCTSANG 136
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 137 KPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 174
>gi|10764653|gb|AAG22808.1|AF297665_1 nectin-1 [Mus musculus]
Length = 515
Score = 58.2 bits (139), Expect = 2e-07
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK N+A Y+ + GV V Y + P + T+ + L ++
Sbjct: 58 PSVKITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSGLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDADTVTCLAT-----G 229
DEG Y+C F +F L V + PT ++ + + + D +AT G
Sbjct: 118 DEGMYICEFATFPTGNRESQLNLTVMAKPTNWIEGTRAVLRARKGQDNKVLVATCTSANG 177
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 178 KPPSAVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 215
>gi|18203124|sp|Q9JKF6|PVR1_MOUSE Poliovirus receptor related
protein 1 precursor (Herpes virus entry mediator C)
(HveC) (Nectin 1)
Length = 515
Score = 58.2 bits (139), Expect = 2e-07
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK N+A Y+ + GV V Y + P + T+ + L ++
Sbjct: 58 PSVKITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSGLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDADTVTCLAT-----G 229
DEG Y+C F +F L V + PT ++ + + + D +AT G
Sbjct: 118 DEGMYICEFATFPTGNRESQLNLTVMAKPTNWIEGTRAVLRARKGQDNKVLVATCTSANG 177
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 178 KPPSAVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 215
>gi|8515827|gb|AAF76195.1|AF270977_1 nectin-1 alpha [Mus musculus]
Length = 516
Score = 58.2 bits (139), Expect = 2e-07
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK N+A Y+ + GV V Y + P + T+ + L ++
Sbjct: 58 PSVKITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSGLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDADTVTCLAT-----G 229
DEG Y+C F +F L V + PT ++ + + + D +AT G
Sbjct: 118 DEGMYICEFATFPTGNRESQLNLTVMAKPTNWIEGTRAVLRARKGQDNKVLVATCTSANG 177
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 178 KPPSAVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 215
>gi|11496257|ref|NP_067399.1| poliovirus receptor-related 1;
nectin-1 delta; nectin-1 alpha [Mus musculus]
gi|7331232|gb|AAF60333.1| nectin-1 delta [Mus musculus]
Length = 515
Score = 58.2 bits (139), Expect = 2e-07
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 10/158 (6%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK N+A Y+ + GV V Y + P + T+ + L ++
Sbjct: 58 PSVKITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSGLELE 117
Query: 180 DEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL-ATG 229
DEG Y+C F +F L V + PT ++ + + + D TC A G
Sbjct: 118 DEGMYICEFATFPTGNRESQPNLTVMAKPTNWIEGTRAVLRARKGQDDKVLVATCTSANG 177
Query: 230 RPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
+PP V+W + QE + +TV R +P
Sbjct: 178 KPPSAVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 215
>gi|11096295|gb|AAG30284.1|AF308635_1 herpesvirus entry mediator C
[Cercopithecus aethiops]
Length = 298
Score = 57.8 bits (138), Expect = 3e-07
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 120 PRADIVSVTWQKRQLP---GPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNL 176
P I VTWQK NVA Y+ S GV V YR + P + T+ + L
Sbjct: 17 PSVKITQVTWQKITQATNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRL 76
Query: 177 AVDDEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ-----VNSTEDAD----TVTCL- 226
++DEG Y+C F +F L V + PT ++ + + + D TC
Sbjct: 77 ELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTS 136
Query: 227 ATGRPPPNVTWAAPWNNASSTQEQFTDSDGLTVAWRTVRLP 267
A G+PP V+W + QE + +TV R +P
Sbjct: 137 ANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 177
>gi|25901003|dbj|BAC41265.1| poliovirus receptor related-gene 1
[Canis familiaris]
Length = 98
Score = 54.3 bits (129), Expect = 3e-06
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 114 LTCAIT---PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNST 170
L C+ T P I VTWQK NVA Y+ + GV V YR + P + T
Sbjct: 12 LHCSFTNPLPSVKITQVTWQKATNGSKQNVAIYNPAMGVSVLAPYRERVEFLRPSFTDGT 71
Query: 171 LVIHNLAVDDEGCYLCIFNSF 191
+ + L +DDEG Y+C F +F
Sbjct: 72 IRLSRLELDDEGVYICEFATF 92
>gi|25901001|dbj|BAC41264.1| poliovirus receptor related-gene 1
[Gorilla gorilla]
gi|26106000|dbj|BAC41501.1| poliovirus receptor related-gene 1 [Pan troglodytes]
Length = 98
Score = 53.1 bits (126), Expect = 7e-06
Identities = 27/72 (37%), Positives = 36/72 (49%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 21 PSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 80
Query: 180 DEGCYLCIFNSF 191
DEG Y+C F +F
Sbjct: 81 DEGVYICEFATF 92
>gi|28076965|ref|NP_081790.1| hypothetical protein D7Ertd458e [Mus
musculus]
gi|21595491|gb|AAH32283.1| hypothetical protein D7Ertd458e [Mus musculus]
gi|26332813|dbj|BAC30124.1| unnamed protein product [Mus musculus]
gi|26348737|dbj|BAC38008.1| unnamed protein product [Mus musculus]
Length = 408
Score = 53.1 bits (126), Expect = 7e-06
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 85 LPWVAFIW-LALLGAVGGARV------QGPMRGSAALTCAITPRAD--IVSVTWQKRQLP 135
L W+ ++ AL A G RV G + GS L C++T + I +TW K+
Sbjct: 12 LSWLLLLFCYALRKAGGDIRVLVPYNSTGVLGGSTTLHCSLTSNENVTITQITWMKKDSG 71
Query: 136 GP-VNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGR 194
G VA + G ++ R K L N++L I NL+V+DEG Y C +F
Sbjct: 72 GSHALVAVFHPKKGPNIKEPERVKFLAAQQDLRNASLAISNLSVEDEGIYECQIATFPRG 131
Query: 195 QVSCTACLEVTSPPTGHVQVNSTEDA----DTVTCL-ATGRPPPNVTWAAPWNNASSTQE 249
S A L+V + P + D C+ A G PP ++W + N + +
Sbjct: 132 SRSTNAWLKVQARPKNTAEALEPSPTLILQDVAKCISANGHPPGRISWPSNVNGSHREMK 191
Query: 250 QFTDSDGLT 258
+ G T
Sbjct: 192 EPGSQPGTT 200
>gi|26347161|dbj|BAC37229.1| unnamed protein product [Mus musculus]
Length = 408
Score = 53.1 bits (126), Expect = 7e-06
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 85 LPWVAFIW-LALLGAVGGARV------QGPMRGSAALTCAITPRAD--IVSVTWQKRQLP 135
L W+ ++ AL A G RV G + GS L C++T + I +TW K+
Sbjct: 12 LSWLLLLFCYALRKAGGDIRVLVPYNSTGVLGGSTTLHCSLTSNENVTITQITWMKKDSG 71
Query: 136 GP-VNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGR 194
G VA + G ++ R K L N++L I NL+V+DEG Y C +F
Sbjct: 72 GSHALVAVFHPKKGPNIKEPERVKFLAAQQDLRNASLAISNLSVEDEGIYECQIATFPRG 131
Query: 195 QVSCTACLEVTSPPTGHVQVNSTEDA----DTVTCL-ATGRPPPNVTWAAPWNNASSTQE 249
S A L+V + P + D C+ A G PP ++W + N + +
Sbjct: 132 SRSTNAWLKVQARPKNTAEALEPSPTLILQDVAKCISANGHPPGRISWPSNVNGSHREMK 191
Query: 250 QFTDSDGLT 258
+ G T
Sbjct: 192 EPGSQPGTT 200
>gi|12644211|sp|P32507|PVR2_MOUSE Poliovirus receptor related
protein 2 precursor (Murine herpesvirus entry protein B)
(mHveB) (Nectin 2) (Poliovirus receptor homolog)
gi|627932|pir||A53437 poliovirus receptor mPVR - mouse
gi|825507|dbj|BAA05103.1| poliovirus receptor homolog protein soluble form [Mus musculus]
Length = 530
Score = 52.8 bits (125), Expect = 8e-06
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 104 VQGPMRGSAALTCAITPRAD--IVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANI 161
V+G + G+ L C + P + VTWQ+ L G V VA + S+GV K +
Sbjct: 42 VRGRLGGTVELPCHLLPPTTERVSQVTWQR--LDGTV-VAAFHPSFGVDFPNSQFSKDRL 98
Query: 162 --------TCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ 213
T L ++TL L V+DEG Y C F +F L V + P H +
Sbjct: 99 SFVRARPETNADLRDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAE 158
Query: 214 VNST----EDADTVTCLAT-GRPPPNVTWAAPW-NNASSTQEQFTDSDGLTVAWRTVRLP 267
+ C++T GRPP +TW + A TQE + +T+ R +P
Sbjct: 159 AQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVP 218
Query: 268 RG 269
G
Sbjct: 219 VG 220
>gi|25900993|dbj|BAC41260.1| poliovirus receptor related-gene 1
[Cebus apella]
gi|25901005|dbj|BAC41266.1| poliovirus receptor related-gene 1 [Callithrix jacchus]
Length = 98
Score = 52.8 bits (125), Expect = 8e-06
Identities = 27/72 (37%), Positives = 36/72 (49%)
Query: 120 PRADIVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVD 179
P I VTWQK NVA Y+ S GV V YR + P + T+ + L ++
Sbjct: 21 PSVKITQVTWQKATNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELE 80
Query: 180 DEGCYLCIFNSF 191
DEG Y+C F +F
Sbjct: 81 DEGVYICEFATF 92
>gi|15489125|gb|AAH13673.1| hypothetical protein D7Ertd458e [Mus
musculus]
Length = 408
Score = 52.8 bits (125), Expect = 8e-06
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 85 LPWVAFIW-LALLGAVGGARV------QGPMRGSAALTCAITPRAD--IVSVTWQKRQLP 135
L W+ ++ AL A G RV G + GS L C++T + I +TW K+
Sbjct: 12 LSWLLLLFCYALRKAGGDIRVLVPYNSTGVLGGSTTLHCSLTSNENVTITQITWMKKDSG 71
Query: 136 GP-VNVATYSHSYGVVVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGR 194
G VA + G ++ R K L N++L I NL+V+DEG Y C +F
Sbjct: 72 GSHALVAVFHPKKGPNIKEPERVKFLAAQQDLRNASLAISNLSVEDEGIYECQIATFPRG 131
Query: 195 QVSCTACLEVTSPPTGHVQVNSTEDA----DTVTCL-ATGRPPPNVTWAAPWNNASSTQE 249
S A L+V + P + D C+ A G PP ++W + N + +
Sbjct: 132 SRSTNAWLKVQARPKNTAEALEPSPTLILQDVAKCISANGHPPGRISWPSNVNGSHREMK 191
Query: 250 QFTDSDGLT 258
+ G T
Sbjct: 192 EPGSQPGTT 200
>gi|11386199|ref|NP_056295.1| nectin 3 [Homo sapiens]
gi|9716665|gb|AAF97597.1| nectin 3; PRR3 [Homo sapiens]
Length = 549
Score = 52.8 bits (125), Expect = 9e-06
Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 95 LLGAVGGARVQGPMRGS-----AALTCAITPRADIVSVTWQKRQLPGPVNVATYSHSYGV 149
L GA+ G + P + +L C I I ++W+K VA + YG
Sbjct: 52 LCGALAGPIIVEPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGF 111
Query: 150 VVQTQYRHKANITCPGLWNSTLVIHNLAVDDEGCYLCIFNSFG-GRQVSCTACLEVTSPP 208
VQ +Y+ + L ++T+ +HN+ D G Y+C +F G S T + P
Sbjct: 112 SVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPT 171
Query: 209 TGHVQ-----VNSTEDADTVTCL-ATGRPPPNVTWAAPWNNASSTQEQFTDSDGLTVA 260
++ ++ + C+ ATG+P ++ W ST F + ++
Sbjct: 172 VSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIIS 229
>gi|31982077|ref|NP_033016.2| poliovirus receptor-related 2;
poliovirus sensitivity [Mus musculus]
gi|28386146|gb|AAH46770.1| poliovirus receptor-related 2 [Mus musculus]
Length = 530
Score = 52.8 bits (125), Expect = 9e-06
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 104 VQGPMRGSAALTCAITPRAD--IVSVTWQKRQLPGPVNVATYSHSYGVVVQTQYRHKANI 161
V+G + G+ L C + P + VTWQ+ L G V VA + S+GV K +
Sbjct: 42 VRGRLGGTVELPCHLLPPTTERVSQVTWQR--LDGTV-VAAFHPSFGVDFPNSQFSKDRL 98
Query: 162 --------TCPGLWNSTLVIHNLAVDDEGCYLCIFNSFGGRQVSCTACLEVTSPPTGHVQ 213
T L ++TL L V+DEG Y C F +F L V + P H +
Sbjct: 99 SFVRARPETNADLRDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAE 158
Query: 214 VNST----EDADTVTCLAT-GRPPPNVTWAAPW-NNASSTQEQFTDSDGLTVAWRTVRLP 267
+ C++T GRPP +TW + A TQE + +T+ R +P
Sbjct: 159 AQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVP 218
Query: 268 RG 269
G
Sbjct: 219 VG 220
Database: nr
Posted date: Jul 9, 2003 8:50 AM
Number of letters in database: 469,658,079
Number of sequences in database: 1,463,011
Lambda K H
0.319 0.134 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 368,261,486
Number of Sequences: 1463011
Number of extensions: 16365907
Number of successful extensions: 44822
Number of sequences better than 1.0e-05: 58
Number of HSP's better than 0.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 44748
Number of HSP's gapped (non-prelim): 63
length of query: 348
length of database: 469,658,079
effective HSP length: 124
effective length of query: 224
effective length of database: 288,244,715
effective search space: 64566816160
effective search space used: 64566816160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)