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Finding cDNAs
UGID:1779140     UniGene Hs.563630     Homo sapiens (human)   TTC39B Order cDNA clone, Links
Tetratricopeptide repeat domain 39B, mRNA (cDNA clone IMAGE:5218216) (TTC39B)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_689787.1 tetratricopeptide repeat domain 39B H. sapiens 100.0 615
XP_528545.2 PREDICTED: hypothetical protein P. troglodytes 99.7 693
NP_081514.1 tetratricopeptide repeat domain 39B M. musculus 92.9 616
NP_001088170.1 hypothetical protein LOC494994 X. laevis 72.3 570
NP_001073553.1 hypothetical protein LOC790939 D. rerio 56.4 562

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; uncharacterized tissue; thyroid; brain; esophagus; liver; pancreas; kidney; vascular; muscle; pharynx; mixed; pituitary gland; lung; placenta; adrenal gland; mouth; spleen; uterus; eye; connective tissue; thymus; prostate; skin; intestine; ear; blood; bone; lymph node; ovary; stomach
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p22.3
UniSTS entry: Chr 9 RH46198
UniSTS entry: Chr 9 (n/a)
UniSTS entry: Chr 9 SHGC-53778
UniSTS entry: Chr 9 RH46295
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

BC042417.1 Homo sapiens tetratricopeptide repeat domain 39B, mRNA (cDNA clone IMAGE:5167643), partial cds PA
BC070139.1 Homo sapiens cDNA clone IMAGE:30404190, partial cds PA
AK021570.1 Homo sapiens cDNA FLJ11508 fis, clone HEMBA1002162
BC142985.1 Homo sapiens tetratricopeptide repeat domain 39B, mRNA (cDNA clone MGC:167095 IMAGE:8860428), complete cds PA
AK310482.1 Homo sapiens cDNA, FLJ17524 P
AK310271.1 Homo sapiens cDNA, FLJ17313 P
AK093996.1 Homo sapiens cDNA FLJ36677 fis, clone UTERU2004861
AK093459.1 Homo sapiens cDNA FLJ36140 fis, clone TESTI2024936, moderately similar to Homo sapiens DEME-6 mRNA P
AK091187.1 Homo sapiens cDNA FLJ33868 fis, clone CTONG2006611, moderately similar to Homo sapiens DEME-6 mRNA P
AK301427.1 Homo sapiens cDNA FLJ60357 complete cds P
AK301185.1 Homo sapiens cDNA FLJ60910 complete cds P
AK298581.1 Homo sapiens cDNA FLJ60322 complete cds P
AK298998.1 Homo sapiens cDNA FLJ60329 complete cds PA
NM_152574.1 Homo sapiens tetratricopeptide repeat domain 39B (TTC39B), mRNA P
BC038592.1 Homo sapiens tetratricopeptide repeat domain 39B, mRNA (cDNA clone IMAGE:5218216), complete cds PA

EST sequences (10 of 115) [Show all sequences]

BX105862.1 Clone IMAGp998C115718_;_IMAGE:2307394 uncharacterized tissue A
BX094163.1 Clone IMAGp998K221784_;_IMAGE:727437 testis P
CB160540.1 Clone L18POOL1n1-21-A01 liver 5' read
AI270597.1 Clone IMAGE:1978936 stomach 3' read A
CB121022.1 Clone L10ChoCK0-26-E04 liver 5' read
AA904681.1 Clone IMAGE:1504010 mixed 3' read P
AI242326.1 Clone IMAGE:1856807 mixed 3' read A
AI473911.1 Clone IMAGE:2137171 kidney 3' read A
AI653293.1 Clone IMAGE:2308565 uncharacterized tissue 3' read
AI672546.1 Clone IMAGE:2307394 uncharacterized tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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