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Report for CCDS ID CCDS26413.1

CCDS Status Species Chrom. Gene NCBI Builds Links
26413.1 Public Mus musculus 13 E2f3 36.1 - 37.1 CCDS HistoryEntrezGene:13557Re-query CCDS DB by GeneID:13557

Sequence IDs included in CCDS 26413.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000102948 ENSMUSP00000100012 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102948Link to Ensembl Protein Viewer:ENSMUSP00000100012Re-query CCDS DB by Nucleotide ID:ENSMUST00000102948Re-query CCDS DB by Protein ID:ENSMUSP00000100012
Original member Current member EBI,WTSI OTTMUST00000001388 OTTMUSP00000000663 Accepted alive Link to Vega Transcript Viewer:OTTMUST00000001388Link to Vega Protein Viewer:OTTMUSP00000000663Re-query CCDS DB by Nucleotide ID:OTTMUST00000001388Re-query CCDS DB by Protein ID:OTTMUSP00000000663
Original member NCBI NM_010093.2 NP_034223.1 Updated not alive Link to Nucleotide Sequence:NM_010093.2Link to Protein Sequence:NP_034223.1Re-query CCDS DB by Nucleotide ID:NM_010093Re-query CCDS DB by Protein ID:NP_034223
Current member NCBI NM_010093.3 NP_034223.1 Accepted alive Link to Nucleotide Sequence:NM_010093.3Link to Protein Sequence:NP_034223.1Re-query CCDS DB by Nucleotide ID:NM_010093Re-query CCDS DB by Protein ID:NP_034223

Chromosomal Locations for CCDS 26413.1

On '-' strand of Chromosome 13 (NC_000079.5)
Genome Browser links: Link to NCBI Map Viewer on chromosome 13Link to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13Link to Vega Genome Browser on chromosome 13

Chromosome Start Stop Links
13 30001772 30002034 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13Link to Vega Genome Browser on chromosome 13
13 30003062 30003197 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13Link to Vega Genome Browser on chromosome 13
13 30005273 30005387 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13Link to Vega Genome Browser on chromosome 13
13 30008715 30008873 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13Link to Vega Genome Browser on chromosome 13
13 30010445 30010664 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13Link to Vega Genome Browser on chromosome 13
13 30011983 30012094 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13Link to Vega Genome Browser on chromosome 13
13 30077169 30077537 Link to NCBI Entrez NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13Link to Vega Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternate exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGAGAAAGGGGATCCAGCCCGCCCTGGAGCAGTACCTGGTGACCGCCGGGGGTGGGGAGGGGGCGGCTG
TCGTCGCCGCCGCCGCTGCAGCCTCCATGGACAAAAGGGCACTGCTAGCCAGCCCCGGCTTCGCCGCCGC
CGCCGCCCCGGGCACGTACATCCAGATCCTCACTACGAACCCTTCCACCACGTCCTGTGCCACCTCCCTC
CAAAGTGGCGCCCTGACCGCCGGCCCCCTTCTCCCCAGTGTCCCCGGCACGGAGCCGGCCGCCAGCAGCC
TCTACACCACGCCACAAGGACCCTCCAGCAGAGTCGGGCTGCTGCAGCAGCCACCAGCACCAGGACGCGG
CGGCGGCGGTGGCCCACCGGCAAAGCGAAGGCTGGAACTGGGCGAGAGTGGCCATCAGTACCTCTCAGAT
GGTCTAAAGACCCCCAAGGGCAAAGGAAGAGCTGCACTACGGAGTCCCGATAGTCCAAAAACTCCAAAAT
CTCCCTCAGAAAAAACGCGGTATGATACGTCCCTCGGTCTGCTCACCAAGAAGTTCATTCAGCTCCTGAG
CCAGTCTCCTGATGGGGTCCTGGATCTGAACAAGGCAGCAGAGGTGCTCAAGGTGCAGAAGAGGAGGATT
TACGACATCACCAACGTGCTGGAAGGCATCCACCTCATTAAGAAGAAGTCTAAGAACAACGTCCAGTGGA
TGGGCTGCAGTCTGTCTGAGGATGGGGGCATGCTGGCCCAGTGTCAAGGCCTGTCCAAAGAAGTGACTGA
GCTCAGTCAGGAAGAGAAGAAATTAGATGAGCTGATCCAAAGCTGTACCCTGGACCTCAAACTGTTAACC
GAGGATTCAGAGAATCAAAGGTTAGCTTATGTTACATATCAAGATATTCGAAAAATTAGTGGCCTTAAAG
ACCAAACTGTTATAGTTGTGAAAGCCCCTCCAGAAACGAGACTTGAAGTGCCTGACTCAATAGAGAGCCT
ACAAATCCATTTGGCAAGTACCCAAGGGCCCATTGAGGTTTACTTGTGTCCAGAAGAGACGGAAACACAC
AGACCCATGAAAACAAATAACCAAGACCACAATGGGAATATCCCCAAGCCCACTTCCAAAGACTTGGCTT
CTAACAACTCAGGACATAGTGACTGCTCGGTTTCTACAGCAAACCTCTCTCCTCTGGCCTCCCCAGCCAA
CCTTTTACAGCAGACTGAGGACCAAATCCCGTCCAACCTTGAAGGACCTTTTGTGAACTTACTGCCTCCC
CTGCTCCAAGAGGACTACCTGCTGAGCCTGGGGGAGGAAGAGGGCATCAGTGACCTCTTCGATGCCTATG
ATTTGGAAAAGCTGCCTCTGGTGGAGGACTTCATGTGTAGTTGA

Translation (457 aa):
MRKGIQPALEQYLVTAGGGEGAAVVAAAAAASMDKRALLASPGFAAAAAPGTYIQILTTNPSTTSCATSL
QSGALTAGPLLPSVPGTEPAASSLYTTPQGPSSRVGLLQQPPAPGRGGGGGPPAKRRLELGESGHQYLSD
GLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRI
YDITNVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLT
EDSENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVPDSIESLQIHLASTQGPIEVYLCPEETETH
RPMKTNNQDHNGNIPKPTSKDLASNNSGHSDCSVSTANLSPLASPANLLQQTEDQIPSNLEGPFVNLLPP
LLQEDYLLSLGEEEGISDLFDAYDLEKLPLVEDFMCS


Links Key
 Links to:   History report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Map Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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