"Numerical Methods in Neuronal Modeling"

Supplementary Notes and Exercises

• Woods Hole MCNS Lecture Notes (including exercises) (gzipped PostScript) (177K)
• Model Example Files (compressed, tarred xpp source; 9K)
• Chapter(gzipped PostScript; 133K) from Methods in Neuronal Modeling, Koch and Segev, Eds., 2nd edition (link to the book).

General Numerical Analysis Links

• Numerical Analysis FAQ
• Na-net

Differential Equation and Other Software

• Guide to Available Mathematical Software (GAMS)
• Visual Numerics, Inc. (IMSL)
• Numerical Algorithms Group, Ltd. (NAGlib)
• Netlib
• Numerical Recipes
• xpp
• Madonna, shareware ODE solver for Macintosh.
• dstool
• PLOD
• AUTO
• CODEE (Educational Consortium) + Newsletter + Software Reviews
• Interactive Differential Equations Commercial teaching-oriented software from Addison-Wesley.
• Problem-Solving Environments page at Purdue.

Compartmental Modeling Packages

• Genesis
• Neuron
• NODUS (and Consumer Guide, by E. De Schutter)
• E.O.N.S. synaptic modeling platform

Other Useful Software

• xmgr general two-dimensional graphing package. Publication quality. Menu or script driven.
• TeX/LaTeX for mathematical and technical typesetting.

Disclaimer: References to particular packages or products do not constitute an endorsement or guarantee of good results, but are included solely for the convenience of the user community.

Please send your comments/suggestions about this page to:

asherman@nih.gov

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Last Updated 3/11/99