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GEO accession:
Sample GSM24240
Query DataSets for GSM24240
Status
Public on May 27, 2005
Title
WLOVA2
Sample type
RNA
Channel 1
Source Name
Ref Pool 2
Organism(s)
Mus musculus
Extracted molecule
total RNA
Channel 2
Source Name
WLOVA2
Organism(s)
Mus musculus
Extracted molecule
total RNA
Description
Total RNA from whole lung
no amplification-cDNA
OVA
Submission date
May 27, 2004
Contact name
Michael E. Salazar
Phone
(415) 514-4371
URL
http://arrays.ucsf.edu
Organization name
University of California, San Francisco
Department
Lab
Functional Genomics Core Laboratories
Street address
1550 Fourth Street, RM 545
City
San Francisco
State/province
CA
ZIP/Postal code
94158
Country
USA
Platform ID
GPL1196
Series (1)
GSE1438
Differential Gene Expression due to direct effects of IL-13 on Airway Epithelial Cells
Data table header descriptions
ID_REF
X
Y
Dia.
F635 Median
F635 Mean
F635 SD
B635 Median
B635 Mean
B635 SD
% > B635+1SD
% > B635+2SD
F635 % Sat.
F532 Median
F532 Mean
F532 SD
B532 Median
B532 Mean
B532 SD
% > B532+1SD
% > B532+2SD
F532 % Sat.
VALUE
log ratio (log2 of PRE_VALUE)
Ratio of Means (635/532)
Median of Ratios (635/532)
Mean of Ratios (635/532)
Ratios SD (635/532)
Rgn Ratio (635/532)
Rgn R™ (635/532)
F Pixels
B Pixels
Sum of Medians
Sum of Means
Log Ratio (635/532)
F635 Median - B635
F532 Median - B532
F635 Mean - B635
F532 Mean - B532
F635 Total Intensity
F532 Total Intensity
SNR 635
SNR 532
Flags
Normalize
PRE_VALUE
Ratio of Medians (635/532)
Data table
ID_REF
X
Y
Dia.
F635 Median
F635 Mean
F635 SD
B635 Median
B635 Mean
B635 SD
% > B635+1SD
% > B635+2SD
F635 % Sat.
F532 Median
F532 Mean
F532 SD
B532 Median
B532 Mean
B532 SD
% > B532+1SD
% > B532+2SD
F532 % Sat.
VALUE
Ratio of Means (635/532)
Median of Ratios (635/532)
Mean of Ratios (635/532)
Ratios SD (635/532)
Rgn Ratio (635/532)
Rgn R™ (635/532)
F Pixels
B Pixels
Sum of Medians
Sum of Means
Log Ratio (635/532)
F635 Median - B635
F532 Median - B532
F635 Mean - B635
F532 Mean - B532
F635 Total Intensity
F532 Total Intensity
SNR 635
SNR 532
Flags
Normalize
PRE_VALUE
1
1810
13940
100
4032
3990
646
141
150
64
100
100
0
4555
4269
1330
78
88
42
97
97
0
-0.2025723
0.918
0.892
0.97
1.8
0.849
0.783
80
525
8368
8040
-0.202
3891
4477
3849
4191
319228
341499
60
99.548
0
0
0.869
2
2010
13940
100
3074
3064
470
140
147
59
100
100
0
1963
1929
612
78
88
43
97
96
0
0.6378423
1.58
1.523
1.694
1.907
1.545
0.782
80
527
4819
4775
0.638
2934
1885
2924
1851
245128
154290
49.441
42.814
0
0
1.556
3
2220
13940
110
4425
4370
593
108
117
53
100
100
0
3495
3306
1050
72
79
37
96
95
0
0.3345683
1.318
1.251
1.462
2.135
1.241
0.805
80
598
7740
7496
0.335
4317
3423
4262
3234
349587
264510
80.245
87.216
0
0
1.261
4
2420
13940
100
6106
6112
715
108
115
55
100
100
0
4763
4503
1327
70
77
38
100
100
0
0.3538883
1.354
1.278
1.569
2.282
1.31
0.81
80
503
10691
10437
0.354
5998
4693
6004
4433
488977
360253
109.036
116.474
0
0
1.278
5
2610
13940
100
1092
1077
245
116
122
52
100
100
0
795
755
265
68
76
36
95
93
0
0.4254593
1.399
1.321
1.373
1.62
1.396
0.696
80
516
1703
1648
0.425
976
727
961
687
86194
60422
18.365
18.861
0
0
1.343
6
2830
13940
100
5602
5488
907
122
131
55
100
100
0
5202
5175
957
74
82
46
100
100
0
0.0962623
1.052
1.053
1.054
1.352
1.054
0.832
80
526
10608
10467
0.096
5480
5128
5366
5101
439007
413970
97.4
110.717
0
0
1.069
7
3020
13940
100
597
624
167
135
144
67
100
98
0
483
467
161
78
88
48
96
96
0
0.1902993
1.257
1.161
1.371
2.204
1.293
0.634
80
502
867
878
0.19
462
405
489
389
49902
37378
7.164
7.896
0
0
1.141
8
3220
13940
100
274
285
93
139
154
73
75
40
0
141
143
43
84
94
65
40
6
0
1.2436693
2.475
2.169
2.243
2.478
5.683
0.086
80
510
192
205
1.244
135
57
146
59
22829
11445
1.795
0.754
0
0
2.368
9
3410
13940
110
1150
1168
233
145
158
71
100
100
0
889
841
236
88
100
68
93
93
0
0.3276873
1.359
1.267
1.465
1.998
1.357
0.671
80
578
1806
1776
0.327
1005
801
1023
753
93461
67299
14.225
10.897
0
0
1.255
10
3620
13940
100
708
742
174
147
156
69
100
100
0
437
425
111
90
100
54
97
97
0
0.6933203
1.776
1.832
1.787
1.597
1.894
0.642
80
510
908
930
0.693
561
347
595
335
59328
34011
8.493
6.019
0
0
1.617
11
3810
13930
110
1779
1713
468
142
154
69
98
96
0
1170
1177
242
90
100
50
100
100
0
0.6002703
1.445
1.57
1.318
2.095
1.588
0.72
80
570
2717
2658
0.6
1637
1080
1571
1087
137031
94149
22.594
21.54
0
0
1.516
12
4000
13930
100
3050
3031
883
129
145
76
100
100
0
2143
2153
408
86
101
60
100
100
0
0.5058913
1.404
1.456
1.3
1.904
1.59
0.734
80
518
4978
4969
0.506
2921
2057
2902
2067
242490
172231
37.974
34.2
0
0
1.42
13
4220
13940
100
413
429
131
123
139
83
97
87
0
228
239
87
80
91
53
87
75
0
0.9701173
1.925
1.579
1.998
2.226
2.427
0.372
80
534
438
465
0.97
290
148
306
159
34281
19105
3.494
2.792
0
0
1.959
14
4410
13930
80
2003
1952
356
122
132
62
100
100
0
1392
1401
241
82
91
54
100
100
0
0.5220563
1.387
1.434
1.381
1.315
1.441
0.781
52
332
3191
3149
0.522
1881
1310
1830
1319
101495
72837
29.355
24.259
0
0
1.436
15
4620
13930
110
366
382
124
131
146
64
93
86
0
317
331
97
81
94
55
100
96
0
-0.0057823
1.004
1.062
0.963
2.124
1.64
0.261
80
614
471
501
-0.006
235
236
251
250
30589
26467
3.688
4.309
0
0
0.996
16
4820
13930
110
400
409
143
146
158
86
90
71
0
346
356
110
84
98
96
97
75
0
-0.0454313
0.967
1.008
0.916
2.236
1.013
0.236
80
590
516
535
-0.045
254
262
263
272
32753
28469
2.919
2.688
0
0
0.969
17
5020
13930
110
3339
3153
795
143
157
75
100
100
0
2146
2118
354
84
99
59
100
100
0
0.6322683
1.48
1.543
1.409
1.596
1.655
0.783
80
612
5258
5044
0.632
3196
2062
3010
2034
252272
169410
39.947
34.22
0
0
1.55
18
5250
13950
90
269
284
120
137
147
67
69
50
0
144
165
88
81
99
74
48
19
0
1.0669503
1.75
1.713
1.858
3.984
3.198
0.077
52
387
195
231
1.067
132
63
147
84
14760
8603
2.045
0.892
0
0
2.095
19
5420
13930
110
3327
3133
861
143
153
68
100
100
0
2827
2807
341
83
94
56
100
100
0
0.2141253
1.098
1.138
0.996
1.816
1.21
0.803
80
541
5928
5714
0.215
3184
2744
2990
2724
250607
224583
43.824
48.446
0
0
1.16
20
5620
13930
150
165
184
126
149
160
68
25
8
0
113
119
45
87
105
70
15
2
0
-0.7013423
1.094
1.656
1.807
3.834
6.658
0.006
156
1065
42
67
-0.7
16
26
35
32
28658
18548
0.353
0.2
-50
0
0.615
Total number of rows:
18240
Table truncated, full table size
3556 Kbytes
.
Supplementary data files not provided
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