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Sample GSM24240 Query DataSets for GSM24240
Status Public on May 27, 2005
Title WLOVA2
Sample type RNA
 
Channel 1
Source Name Ref Pool 2
Organism(s) Mus musculus
Extracted molecule total RNA
 
Channel 2
Source Name WLOVA2
Organism(s) Mus musculus
Extracted molecule total RNA
 
 
Description Total RNA from whole lung
no amplification-cDNA
OVA
 
Submission date May 27, 2004
Contact name Michael E. Salazar
Phone (415) 514-4371
URL http://arrays.ucsf.edu
Organization name University of California, San Francisco
Department
Lab Functional Genomics Core Laboratories
Street address 1550 Fourth Street, RM 545
City San Francisco
State/province CA
ZIP/Postal code 94158
Country USA
 
Platform ID GPL1196
Series (1)
GSE1438 Differential Gene Expression due to direct effects of IL-13 on Airway Epithelial Cells

Data table header descriptions
ID_REF
X
Y
Dia.
F635 Median
F635 Mean
F635 SD
B635 Median
B635 Mean
B635 SD
% > B635+1SD
% > B635+2SD
F635 % Sat.
F532 Median
F532 Mean
F532 SD
B532 Median
B532 Mean
B532 SD
% > B532+1SD
% > B532+2SD
F532 % Sat.
VALUE log ratio (log2 of PRE_VALUE)
Ratio of Means (635/532)
Median of Ratios (635/532)
Mean of Ratios (635/532)
Ratios SD (635/532)
Rgn Ratio (635/532)
Rgn R™ (635/532)
F Pixels
B Pixels
Sum of Medians
Sum of Means
Log Ratio (635/532)
F635 Median - B635
F532 Median - B532
F635 Mean - B635
F532 Mean - B532
F635 Total Intensity
F532 Total Intensity
SNR 635
SNR 532
Flags
Normalize
PRE_VALUE Ratio of Medians (635/532)

Data table
ID_REF X Y Dia. F635 Median F635 Mean F635 SD B635 Median B635 Mean B635 SD % > B635+1SD % > B635+2SD F635 % Sat. F532 Median F532 Mean F532 SD B532 Median B532 Mean B532 SD % > B532+1SD % > B532+2SD F532 % Sat. VALUE Ratio of Means (635/532) Median of Ratios (635/532) Mean of Ratios (635/532) Ratios SD (635/532) Rgn Ratio (635/532) Rgn R™ (635/532) F Pixels B Pixels Sum of Medians Sum of Means Log Ratio (635/532) F635 Median - B635 F532 Median - B532 F635 Mean - B635 F532 Mean - B532 F635 Total Intensity F532 Total Intensity SNR 635 SNR 532 Flags Normalize PRE_VALUE
1 1810 13940 100 4032 3990 646 141 150 64 100 100 0 4555 4269 1330 78 88 42 97 97 0 -0.2025723 0.918 0.892 0.97 1.8 0.849 0.783 80 525 8368 8040 -0.202 3891 4477 3849 4191 319228 341499 60 99.548 0 0 0.869
2 2010 13940 100 3074 3064 470 140 147 59 100 100 0 1963 1929 612 78 88 43 97 96 0 0.6378423 1.58 1.523 1.694 1.907 1.545 0.782 80 527 4819 4775 0.638 2934 1885 2924 1851 245128 154290 49.441 42.814 0 0 1.556
3 2220 13940 110 4425 4370 593 108 117 53 100 100 0 3495 3306 1050 72 79 37 96 95 0 0.3345683 1.318 1.251 1.462 2.135 1.241 0.805 80 598 7740 7496 0.335 4317 3423 4262 3234 349587 264510 80.245 87.216 0 0 1.261
4 2420 13940 100 6106 6112 715 108 115 55 100 100 0 4763 4503 1327 70 77 38 100 100 0 0.3538883 1.354 1.278 1.569 2.282 1.31 0.81 80 503 10691 10437 0.354 5998 4693 6004 4433 488977 360253 109.036 116.474 0 0 1.278
5 2610 13940 100 1092 1077 245 116 122 52 100 100 0 795 755 265 68 76 36 95 93 0 0.4254593 1.399 1.321 1.373 1.62 1.396 0.696 80 516 1703 1648 0.425 976 727 961 687 86194 60422 18.365 18.861 0 0 1.343
6 2830 13940 100 5602 5488 907 122 131 55 100 100 0 5202 5175 957 74 82 46 100 100 0 0.0962623 1.052 1.053 1.054 1.352 1.054 0.832 80 526 10608 10467 0.096 5480 5128 5366 5101 439007 413970 97.4 110.717 0 0 1.069
7 3020 13940 100 597 624 167 135 144 67 100 98 0 483 467 161 78 88 48 96 96 0 0.1902993 1.257 1.161 1.371 2.204 1.293 0.634 80 502 867 878 0.19 462 405 489 389 49902 37378 7.164 7.896 0 0 1.141
8 3220 13940 100 274 285 93 139 154 73 75 40 0 141 143 43 84 94 65 40 6 0 1.2436693 2.475 2.169 2.243 2.478 5.683 0.086 80 510 192 205 1.244 135 57 146 59 22829 11445 1.795 0.754 0 0 2.368
9 3410 13940 110 1150 1168 233 145 158 71 100 100 0 889 841 236 88 100 68 93 93 0 0.3276873 1.359 1.267 1.465 1.998 1.357 0.671 80 578 1806 1776 0.327 1005 801 1023 753 93461 67299 14.225 10.897 0 0 1.255
10 3620 13940 100 708 742 174 147 156 69 100 100 0 437 425 111 90 100 54 97 97 0 0.6933203 1.776 1.832 1.787 1.597 1.894 0.642 80 510 908 930 0.693 561 347 595 335 59328 34011 8.493 6.019 0 0 1.617
11 3810 13930 110 1779 1713 468 142 154 69 98 96 0 1170 1177 242 90 100 50 100 100 0 0.6002703 1.445 1.57 1.318 2.095 1.588 0.72 80 570 2717 2658 0.6 1637 1080 1571 1087 137031 94149 22.594 21.54 0 0 1.516
12 4000 13930 100 3050 3031 883 129 145 76 100 100 0 2143 2153 408 86 101 60 100 100 0 0.5058913 1.404 1.456 1.3 1.904 1.59 0.734 80 518 4978 4969 0.506 2921 2057 2902 2067 242490 172231 37.974 34.2 0 0 1.42
13 4220 13940 100 413 429 131 123 139 83 97 87 0 228 239 87 80 91 53 87 75 0 0.9701173 1.925 1.579 1.998 2.226 2.427 0.372 80 534 438 465 0.97 290 148 306 159 34281 19105 3.494 2.792 0 0 1.959
14 4410 13930 80 2003 1952 356 122 132 62 100 100 0 1392 1401 241 82 91 54 100 100 0 0.5220563 1.387 1.434 1.381 1.315 1.441 0.781 52 332 3191 3149 0.522 1881 1310 1830 1319 101495 72837 29.355 24.259 0 0 1.436
15 4620 13930 110 366 382 124 131 146 64 93 86 0 317 331 97 81 94 55 100 96 0 -0.0057823 1.004 1.062 0.963 2.124 1.64 0.261 80 614 471 501 -0.006 235 236 251 250 30589 26467 3.688 4.309 0 0 0.996
16 4820 13930 110 400 409 143 146 158 86 90 71 0 346 356 110 84 98 96 97 75 0 -0.0454313 0.967 1.008 0.916 2.236 1.013 0.236 80 590 516 535 -0.045 254 262 263 272 32753 28469 2.919 2.688 0 0 0.969
17 5020 13930 110 3339 3153 795 143 157 75 100 100 0 2146 2118 354 84 99 59 100 100 0 0.6322683 1.48 1.543 1.409 1.596 1.655 0.783 80 612 5258 5044 0.632 3196 2062 3010 2034 252272 169410 39.947 34.22 0 0 1.55
18 5250 13950 90 269 284 120 137 147 67 69 50 0 144 165 88 81 99 74 48 19 0 1.0669503 1.75 1.713 1.858 3.984 3.198 0.077 52 387 195 231 1.067 132 63 147 84 14760 8603 2.045 0.892 0 0 2.095
19 5420 13930 110 3327 3133 861 143 153 68 100 100 0 2827 2807 341 83 94 56 100 100 0 0.2141253 1.098 1.138 0.996 1.816 1.21 0.803 80 541 5928 5714 0.215 3184 2744 2990 2724 250607 224583 43.824 48.446 0 0 1.16
20 5620 13930 150 165 184 126 149 160 68 25 8 0 113 119 45 87 105 70 15 2 0 -0.7013423 1.094 1.656 1.807 3.834 6.658 0.006 156 1065 42 67 -0.7 16 26 35 32 28658 18548 0.353 0.2 -50 0 0.615

Total number of rows: 18240

Table truncated, full table size 3556 Kbytes.




Supplementary data files not provided

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