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pfam08939: DUF1917 
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Domain of unknown function (DUF1917)
This domain is found in various hypothetical and basophilic leukaemia proteins. It has no known function.
Statistics
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PSSM-Id: 117506
View PSSM: pfam08939
Aligned: 15 rows
Created: 4-Oct-2008
Updated: 30-Oct-2008
Structure
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Program:
Drawing:
Aligned Rows:
pfam08939 is a member of the superfamily cl07513.
Sequence Alignment?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1ZTP_B        22 AEHLAAEAXAADXdPWLVFDARTTPateldawlakypPSQVTRYGDp----GSPNSEPVGWIAVYGQGYSPNSGDVQ-Gl 96
gi 121747096 134 RRLPPLTTSINTC-AWIWAHNPHFDv-----------RDKNKVISHraddfRSLGTQLLGESLQARQQIQSHNLHGP-K- 199
gi 74615674   69 ARTKNVEK------GFIRVANPYAP------------PRWKPAWETy----SKAGEERLRMFTDFIKFYGYGNEADG-Kr 125
gi 82187730   19 AEDYAAESLAADLdPWITFDARKTPraefsswlqshrPSSVSRYGD-----GEASAGPVGWIAVRGPDYSEQSGDVE-Gl 92
gi 123885973  28 AEEHAAESMAADMdPWIIFDARKTPraefsewletyrPSRVSRFGN-----PEEGASPVGWIAVYGPGYCPQVEGGK-El 101
gi 74617879  148 DRLPPVPG-----------------------------PKMGGKNDRf----VPRWNAYMTLFQQVAYKRRIGRMSEE-R- 192
gi 74620179   85 ARLPPATTNCRFGlEWIFIANPYLP------------PRPPSDHDRf----MRAGRERLDLFKSFIDKTTAAYPNSP-L- 146
gi 121792309  79 FRLPPSTTDLRPGlDWIYVANPYAP------------PGPGQAHAQf----CRGGEERLALFAEFEQMATASIAKTS-Gs 141
gi 121805227 105 TRLPPSVTASADVgPWIYVDNPGA-------------GQEEKDIAGl----VGRGTEMLRAFEAKKVTIEVEMEGAS-A- 165
gi 121705278  99 ARLAPSTTKEEDVgPWIFVSNPNRNs-----------NPDGPAITEl----VRKGTELLHGFENQKASLEAEHDRSGsKs 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1ZTP_B        97 -qAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLXHLAPGfKLDHAWAGIARAVV-EGRLQV-AKVSPRAKEG------ 167
gi 121747096 200 --AAITRSLNQESKDLQQRITDLAVECGVLSGKWMLFPKLE-EVNQVWKKVVEGVI-NNRLGPtAKVAPDEGKP------ 269
gi 74615674  126 dlG----NIITERAEVMRNLTRLADACKLRAGKWLLYIPPD-RVEEVWRKIATATV-KNELGSeAGLRRGGMTSrp---- 195
gi 82187730   93 -qDSWETLLTSGRSVSFQNIRELALNHSVLDGKWLMHLDTGfKVDRAWESIARATVlEGKIWS-AKVSPRDPSSn----- 165
gi 123885973 102 -qDAWDKLQSTGRKINYELIKELALNYGVTSGKWLMHLETGfKVDYAWSGIAKAVV-EGQLSV-AKVSPFQTDS------ 172
gi 74617879  193 -----------YREELRDFIGRKARQFRLVRGEWMISVPTS-EATKVWSEIAQATD-LNILGTsARIATSSVIDy----- 254
gi 74620179  147 ---VAKRHIAVARKETIEDLKQLAVECRETSGKWMLFPDVA-FVNDTWKKVARAVA-NHQLGTaAKVATRMPAGyddgha 221
gi 121792309 142 alTALKKEVANERRELVEDLRDLASACNIVTGKWMLFPEPE-RVDEIWAKVAMATV-NGELGIaAKVATRVEAE------ 213
gi 121805227 166 --LARGRKLVPLRRGLEGEIFALARETGVVSGKWMLFLGEE-VVDRVWGIVVEETV-EGRLGVaAKVATREEGG------ 235
gi 121705278 164 -kEALTRKLNPLRRSLEQGIFALARKTGVVSGKWMMFITPD-RVNRYWGAVAAATV-AGELGDaAKVATEGGSG------ 234
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1ZTP_B       168 --GRQVICVYTDDFTDRLGVLEADSAIRAAGIK-----CLLTYKPDVYTYLGIYRA--NRWHLCPTLYES 228
gi 121747096 270 --GDRLICIYTRDFRDQDDVLRVLLELETMGLVns--gRSIYYKSDAFTYLDLYKQtaSEYGLQASLYTS 335
gi 74615674  196 qlEGGLVKVYSRDFRDKAEAARLLEKLEKLGALdp--nKEYYYK-------------------------S 238
gi 82187730  166 --SRHVICVYNQNFTDEEQVVRLDSAIRAAGVK-----CVLYYKPDVYTYLGIYRN--NRWKLCPTIYES 226
gi 123885973 173 ---KHVICVYTQDFTDEESIMQTDAVIRSSGIK-----CLLAYKPDVYTYLGIYRN--NHWQICPTIYES 232
gi 74617879  255 -pNHRLIAVQTVDFSDHEDVDRVLRRLEGMGIVdrtstPPISYQTEAYYYLGIGPN--NIHNMPTAFYTS 321
gi 74620179  222 ekKERLICIYTEDFTDKDDVARVLRRMKELDIT------LTNDAVDAWTELGIYGE--NEWGIKASLV-S 282
gi 121792309 214 --KARLVCVYTSDFRDKDDVARVLNRMRELELVrp-sgKQIYYK--------------SAYDLDRSDSIS 266
gi 121805227 236 --KARLLAIYTKDFGDVEDVRRILERLVEVGLVkr-eeRPIYYKCDAYTYLEITSG--NSYGLKASLFSS 300
gi 121705278 235 --SPRLIAIYTRDYADLDDVKRVLEKLIDLGLVkq-deRPIYYKCDALTYLSIMSD--NPYGLKASMASS 299
Citing CDD
Marchler-Bauer A, Anderson JB, Derbyshire MK, DeWeese-Scott C, Gonzales NR, Gwadz M, Hao L, He S, Hurwitz DI, Jackson JD, Ke Z, Krylov D, Lanczycki CJ, Liebert CA, Liu C, Lu F, Lu S, Marchler GH, Mullokandov M, Song JS, Thanki N, Yamashita RA, Yin JJ, Zhang D, Bryant SH. (2007) CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 35: D237-40
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