Handout     NAR 2006 Paper     NAR 2002 Paper     FAQ     MIAME     Email GEO  
   NCBI > GEO > Accession Display Not logged in | Login
GEO help: Mouse over screen elements for information.
Scope:    Format:    Amount:   GEO accession:    Go
Platform GPL6638 Query DataSets for GPL6638
Status Public on Oct 31, 2008
Title Affymetrix GeneChip ParAllele TrueTag 5 K platform
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism(s) Mus musculus
Manufacturer Affymetrix (ParAllele BioScience)
Manufacture protocol see manufacturer's web site
 
Description GeneChip® Universal Tag Arrays are available in 3K, 5K, 10k or 25K configurations and contain novel, bioinformatically designed tag sequences that result in minimal potential for cross-hybridization.
 
Submission date Mar 20, 2008
Contact name Mathew T Pletcher
E-mail(s) Mathew.Pletcher@pfizer.com, mpletcher@gmail.com
Phone 561-799-8832
Fax 561-799-8805
Organization name Scripps Florida
Street address 5353 Parkside Dr
City Jupiter
State/province FL
ZIP/Postal code 33458
Country USA
 

Data table header descriptions
ID
Assay Id
External Id
dbSNP RS ID refSNP ID
Assay Allele A/C, A/G, A/T, C/G, C/T, G/T
Chrom
Chrom.Pos Genome Version: NCBI Build 34
Chrom Pos (bp) Genome Version: NCBI Build 34
SPOT_ID

Data table
ID Assay Id External Id dbSNP RS ID Assay Allele Chrom Chrom.Pos Chrom Pos (bp) SPOT_ID
274787 274787 rs8253473 rs8253473 A/C chr01 chr01.081220757 81220757 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=8253473
274788 274788 rs8259388 rs8259388 A/G chr01 chr01.176180371 176180371 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=8259388
274789 274789 rs13459050 rs13459050 A/G chr01 chr01.009642091 9642091 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13459050
274790 274790 rs13475698 rs13475698 A/T chr01 chr01.003761177 3761177 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13475698
274792 274792 rs13475733 rs13475733 A/G chr01 chr01.014517580 14517580 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13475733
274793 274793 rs13475813 rs13475813 A/G chr01 chr01.037275092 37275092 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13475813
274794 274794 rs13475818 rs13475818 A/G chr01 chr01.038733816 38733816 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13475818
274795 274795 rs13475914 rs13475914 C/G chr01 chr01.073197519 73197519 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13475914
274796 274796 rs13475933 rs13475933 A/C chr01 chr01.078887506 78887506 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13475933
274797 274797 rs13475954 rs13475954 A/G chr01 chr01.084675270 84675270 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13475954
274798 274798 rs13475973 rs13475973 A/G chr01 chr01.091421210 91421210 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13475973
274799 274799 rs13476011 rs13476011 A/G chr01 chr01.101643444 101643444 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13476011
274800 274800 rs13476112 rs13476112 C/T chr01 chr01.135183389 135183389 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13476112
274801 274801 rs13476134 rs13476134 C/T chr01 chr01.141343834 141343834 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13476134
274802 274802 rs13476270 rs13476270 C/T chr01 chr01.185169341 185169341 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13476270
274803 274803 rs13476294 rs13476294 A/G chr01 chr01.192094248 192094248 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13476294
274804 274804 rs6257970 rs6257970 A/G chr02 chr02.125385024 125385024 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=6257970
274805 274805 rs8279363 rs8279363 C/T chr02 chr02.119433984 119433984 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=8279363
274806 274806 rs13476328 rs13476328 A/G chr02 chr02.005399891 5399891 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13476328
274807 274807 rs13476546 rs13476546 C/T chr02 chr02.065717045 65717045 http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?rs=13476546

Total number of rows: 5071

Table truncated, full table size 625 Kbytes.




Download family Format
SOFT formatted family file(s) SOFT
MINiML formatted family file(s) MINiML

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Section 508 |
NCBI Home NCBI Search NCBI SiteMap