Tripartite motif-containing 55b (trim55b)

NCBI

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UGID:1498581 UniGene Dr.40198 Danio rerio (zebrafish) trim55b

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Tripartite motif-containing 55b (trim55b)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001035071.1	tripartite motif-containing 55b	D. rerio	100.0	365
NP_001085095.1	hypothetical protein LOC432166	X. laevis	78.3	336
NP_001034137.2	tripartite motif-containing 63	M. musculus	75.8	330
NP_912730.2	ring finger protein 30 isoform 2	H. sapiens	75.5	330

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	whole body; brain; heart; reproductive system

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC114283.1	Danio rerio zgc:136833, mRNA (cDNA clone MGC:136833 IMAGE:7267467), complete cds	PA
	NM_001039982.1	Danio rerio tripartite motif-containing 55b (trim55b), mRNA	PA

EST sequences (10 of 23) [Show all sequences]

AI106337.1		heart	5' read	P
BM531715.1	Clone IMAGE:5630619	whole body	5' read	A
BM531770.1	Clone IMAGE:5630506	whole body	5' read	A
BM532007.1	Clone IMAGE:5631154	whole body	5' read	A
BM858366.1	Clone IMAGE:5629133	whole body	5' read	A
BQ450813.1	Clone IMAGE:5902914	whole body	5' read
BQ783709.1	Clone IMAGE:5905019	whole body	5' read
CK683226.1	Clone IMAGE:7145460	whole body	5' read	P
CK684559.1	Clone IMAGE:7147054	whole body	5' read	P
CK697390.1	Clone IMAGE:7162825	whole body	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria