Cancer Genome Anatomy Project

NCI > CGAP > GAI > SNP Maps > Chr 12 > SNPs Localized to Interval 1

D12S352 - D12S99 0.0 cM - 13.8 cM     /     12.78 cR - 31.56 cR

Chromosome:	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Interval: all 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
Tissue:	any adipose adrenal cortex adrenal medulla b-cell blood bone bone marrow brain breast / mammary gland cerebellum cerebrum cervix colon ear (inner) esophagus eye gastrointestinal tract genitourinary system germ cell head and neck heart kidney liver lung lymph node muscle nervous ovary pancreas pancreatic islet parathyroid peripheral nervous system pineal gland pituitary gland placenta prostate retina salivary gland skin soft tissue spleen stomach synovium t-cell testis thymus thyroid uterus vascular whole body uncharacterized tissue [ ? ]
Histology:	any cancer +/- normal normal +/- cancer cancer, not normal normal, not cancer [ ? ]

 

UniGene	Gene Symbol	Description	SNP IDs	SNP Summary	CGAP Gene Info
Validated SNPs
Hs.655804	LOC100049716	Hypothetical protein LOC100049716	CGAP-C-273860	SNPs	Gene Info
Hs.709894	LOC100132369	Hypothetical protein LOC100132369	CGAP-C-272765	SNPs	Gene Info
Hs.504416	B4GALNT3	Beta-1,4-N-acetyl-galactosaminyl transferase 3	CGAP-C-54611 CGAP-C-240267 CGAP-C-240268 CGAP-C-262259	SNPs	Gene Info
Hs.130934	DCP1B	DCP1 decapping enzyme homolog B (S. cerevisiae)	CGAP-C-630348	SNPs	Gene Info
Hs.13768	CACNA2D4	Calcium channel, voltage-dependent, alpha 2/delta subunit 4	CGAP-C-60601	SNPs	Gene Info
Hs.198853	C12orf32	Chromosome 12 open reading frame 32	CGAP-C-619382	SNPs	Gene Info
Hs.371642	ADIPOR2	Adiponectin receptor 2	CGAP-C-59083	SNPs	Gene Info
Hs.504517	TSPAN9	Tetraspanin 9	CGAP-C-245392	SNPs	Gene Info
Hs.504545	C12orf5	Chromosome 12 open reading frame 5	CGAP-C-271308	SNPs	Gene Info
Hs.426162	KCNA6	Potassium voltage-gated channel, shaker-related subfamily, member 6	CGAP-C-59073	SNPs	Gene Info
Predicted SNPs
Hs.437174	SLC6A12	Solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12	CGAP-C-2434497 CGAP-C-2434498	SNPs	Gene Info
Hs.504398	SLC6A13	Solute carrier family 6 (neurotransmitter transporter, GABA), member 13	CGAP-C-2473769	SNPs	Gene Info
Hs.631656	CCDC77	Coiled-coil domain containing 77	CGAP-C-2467344 CGAP-C-2467347	SNPs	Gene Info
Hs.130934	DCP1B	DCP1 decapping enzyme homolog B (S. cerevisiae)	CGAP-C-2426300 CGAP-C-2426301	SNPs	Gene Info
Hs.524183	FKBP4	FK506 binding protein 4, 59kDa	CGAP-C-2448019 CGAP-C-2448020	SNPs	Gene Info
Hs.239	FOXM1	Forkhead box M1	CGAP-C-2401422 CGAP-C-2401423 CGAP-C-2401424 CGAP-C-2401426	SNPs	Gene Info
Hs.13768	CACNA2D4	Calcium channel, voltage-dependent, alpha 2/delta subunit 4	CGAP-C-2478047	SNPs	Gene Info
Hs.198853	C12orf32	Chromosome 12 open reading frame 32	CGAP-C-2437606	SNPs	Gene Info
Hs.371642	ADIPOR2	Adiponectin receptor 2	CGAP-C-2462352 CGAP-C-2462357	SNPs	Gene Info
Hs.655744	-	CDNA FLJ31750 fis, clone NT2RI2007406	CGAP-C-2463613	SNPs	Gene Info
Hs.94865	TEAD4	TEA domain family member 4	CGAP-C-2438069	SNPs	Gene Info
Hs.504517	TSPAN9	Tetraspanin 9	CGAP-C-2484334	SNPs	Gene Info
Hs.376071	CCND2	Cyclin D2	CGAP-C-2481709	SNPs	Gene Info
Hs.504545	C12orf5	Chromosome 12 open reading frame 5	CGAP-C-2440465 CGAP-C-2440466	SNPs	Gene Info
Hs.75227	NDUFA9	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa	CGAP-C-2460522 CGAP-C-2460526	SNPs	Gene Info
Hs.302977	C12orf4	Chromosome 12 open reading frame 4	CGAP-C-2413508 CGAP-C-2413509	SNPs	Gene Info
Hs.709525	RAD51AP1	RAD51 associated protein 1	CGAP-C-2418120 CGAP-C-2418121	SNPs	Gene Info

Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov )