Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss805253	SC_JCM|AL137186.5_41710		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	07/27/00	10/10/03	83	Genomic			unknown
ss971003	KWOK|OVLP-000804-516620		fwd/B	C/T	aggagtttgagactagcatggccaacatgg	gaagccccgtctctactgaaaaaaaataca	09/01/00	10/10/03	86	Genomic			99 %
ss1868154	KWOK|OVLP-000925-66147		fwd/B	C/T	aggagtttgagactagcatggccaacatgg	gaagccccgtctctactgaaaaaaaataca	10/06/00	10/10/03	87	Genomic			99 %
ss3063390	TSC-CSHL|TSC1152175		fwd/B	C/T	aggagtttgagactagcatggccaacatgg	gaagccccgtctctactgaaaaaaaataca	06/07/01	10/10/03	96	Genomic			unknown
ss3899610	SC_JCM|AL137186.11_154279		fwd/B	C/T	aggagtttgagactagcatggccaacatgg	gaagccccgtctctactgaaaaaaaataca	09/25/01	10/10/03	100	Genomic			unknown
ss10640436	BCM_SSAHASNP|chr10.NT_077569.2_313667		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	06/29/03	10/10/03	116	Genomic			unknown
ss16007742	SC_SNP|NT_077569.2_313667		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	11/18/03	11/22/03	120	Genomic			unknown
ss16508797	CSHL-HAPMAP|CSHL-HuAA-200402.chr10.NT_077569.2_313667		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	02/17/04	03/04/04	120	Genomic			unknown
ss17410513	CSHL-HAPMAP|CSHL-HuCC-200402.chr10.NT_077569.2_313667		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	02/19/04	03/04/04	120	Genomic			unknown
ss19188740	CSHL-HAPMAP|CSHL-HuDD-200402.chr10.NT_077569.2_313667		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	02/20/04	03/04/04	120	Genomic			unknown
ss20717120	SSAHASNP|WGSA-200403-chr10.chr10.NT_077569.2_313667		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	03/18/04	03/19/04	121	Genomic			unknown
ss39784840	ABI|hCV921090		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	07/16/05	07/16/05	126	Genomic			unknown
ss88079637	BCMHGSC_JDW|JWB-0228867		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	02/26/08	02/27/08	129	Genomic			unknown
ss109194568	1000GENOMES|CEU.trio.12.15.2008_2285597_chr10_5990777		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	12/15/08	12/16/08	130	Genomic			unknown
ss115300546	1000GENOMES|NA19240_2008_12_16_2064996_chr10_5990777		rev/T	A/G	tgtattttttttcagtagagacggggcttc	ccatgttggccatgctagtctcaaactcct	12/18/08	12/19/08	130	Genomic			unknown

Fasta sequence   (Legend)

 AGCTCACCGT ATGAGGTTCA GCACACACAG GTCTGACTCC TTTTCTATGC CACAGTTAGA
 CAGGATGCCG TCCACTTTGC TGACAGCTTG CTCTTCATTC ATCAGGTATC GATGGTACAG
 CTTCTTCCAA GGAATGAACT ATGCAGTTAA AAAACAAACA AAATAACATG AGGCAAAGGG
 CCATTAGAAA GCAGATTAAT gaggcgggca gatcgcctga ggtcaggagt ttgagactag
 catggccaac atgg
 Y
 gaagccccgt ctctactgaa aaaaaataca aaaattagcc aggcatgatg gcacatgcct
 gtagtcccag ctactcagga agctgaggca ggagaatcac ttgaacctgg gaggcggagg
 ttgcagtgag ccgagatcaa gccactgcag tgcacgctag cctgggtgac agagtgagac
 tccatctcaa aaaaaaaaaa agaaagaaaa aaaGCAGATT AAGCCACAAA CACATAGATA
 ACCTTTTACC AGTGAAAAGC AATCACAGCT CACAATTCAA AAGCCAGGAA AATCAGGCAG
 AAATGTTACA CAAATTTTTG TTGGAAACTA GGAGAACTGG GTCTTGGTCT TGGTTCTAAC
 ActaACTTGT TATAGTTAAA GAATCTGGGA AAAACTATAG CTTCAGTTTC CCTGTCTGAA
 ACATTAGTAC ACGTAACTCA GGGTTTCAat gggaacaaaa taatatgaga gctgtggcta
 tactaatatc agacaaaaca gactttaagt caattctgtc tgttaaatac tgttataaga
 gacgaaggac ataatgataa aagggtcaat tcaccaagaa gatataataa ctataaatat
 atatgcacca cacattagag ctcctaaata taggaaacaa cccctgacag aactgaaggt
 agaaaccaac agcaacacaa taatagaagg agatttcaac actgctattt caatgatgga
 tggaacaacc agacagaaga taaataagga aaacagagga tctgaacaac actatggact
 aagcgggctg aacgaacata tacagaatac tccacccaac aacagcaaaa tatacattcc
 tctcaagggc acatgaaaca ttctccagga tagatcacct gttaggccac aaaacaagtt
 tcaacaaact taaaaaccac ttaagttatt atatgaagta tctttttaaa tcacaatgga
 atgtaaccag aaatcaatag cagaaggaaa actgaaaaat ccacaaatat atggatatta
 aacaacatac ccttgcccag gcacagtggt ttatgcctgt aatccctgca ctttgggcag
 ctgagacagg cggatcactt aaggccagga ctttgagacc atcctggatt acatggtgaa
 accctatctc tcctaaaaat acaaaaatta gccaggcatg gtggcacatg tctgtaatcc
 cagctacttg ggaggctaag gcacaagaat cacttgaact tgggaggtgg aggttgcagt
 gagccaaagt cgagccactg cactccagcc tgggtgacag agcaagactc tgtctcaaaa
 aaaaaaaaaa aaaaaccaac aacaacaaaa aacacattct taaaacaacc aatgggtcaa
 agaagaaatc acaaagaaaa gtagaaaata tcttgagaca aatgaaaatg aaaacataac
 ataccaaaac ttatgaaatg caatgaatgc tgttgggctg ttttaagaga ggggtttatt
 gctataaatg cttacactca aacaaacaaa caaacaaaAA ATGggccaga catggtggct
 cacgcctgta accccagcac ttgggaggct gatggcaggc agatcacttg aagttaggag
 tttcagagac catcctggcc aacatggtaa aaccccatgt ctactgaaaa tacaaaaatt
 agccgggtgt ggtggcgcac gcctgtaatc ccagctactg gggaggctga ggcaggagaa
 tcacttgaac ctgggaggca gaggttgcag tgagtcagga tcgtgccact gcactccagc
 ctgggcaaca gtgggaaact ctgtctcaaa aaaaaaaaaa aagaaGTCAA GGGAGATATG
 AGGAACCCTC CAGGTGGGGA AGGTGGGAGG ATGAGAGCAA

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_077569->NM_032807 sv function
reference	NT_077569->NM_178150 sv function

Integrated Maps:

NCBI Resource Links

Population Diversity

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	UNKNOWN