proteins
| 20 proteins |
H | COG1713 | Predicted HD superfamily hydrolase involved in NAD metabolism | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Thermotoga maritima (Thermotogales | Thermotogae (class)) | ||||
| TM1648 | ||||
182 letters (r) 0
0 827 _ ||| 1 TM1558 (182) COG2316 50
-6 275 _ 2 DR2421 (205) COG2316
7
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM1558
(182 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
TM1558 323 2e-88
AF0032 120 2e-27
DR2421 110 2e-24
SP1746 38 0.011
CAC1263 37 0.017
Ta0931_2 37 0.018
BH1327 37 0.034
BB0504 35 0.11
SA1129 34 0.15
SPy0309 34 0.18
L26998 34 0.20
SSO1322 34 0.22
MJ0778 33 0.27
aq_1732 33 0.27
FN1913 33 0.32
PH1292 33 0.36
PAB1786 33 0.42
L132126 32 0.53
SSO1942 32 0.63
alr2851 32 0.71
TM1857 31 1.5
aq_1769 30 2.7
L179243 30 2.7
PAE0934 30 2.8
NMB1150 30 2.9
NMB1188 30 2.9
APE2338 30 3.0
NMA1361 30 3.0
slr1885 30 3.3
FN0607 30 3.4
UU085 30 3.9
RSc2515 30 4.2
MG130 29 4.3
Cj1209 29 5.2
Cj1715 29 5.4
SPAC630.05 29 5.4
CAC1816 29 6.4
DR2462 29 6.9
PA4108 28 7.4
PH0999 28 7.9
SA1825 28 7.9
BS_yvhJ 28 8.1
mll5763 28 8.1
MK0194 28 9.9
jhp0697 28 9.9
# >TM1558
# Length = 182
#
# Score = 323 bits (827), Expect = 2e-88
# Identities = 182/182 (100%), Positives = 182/182 (100%)
#
# Query: 1 MISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTK 60
# MISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTK
# Sbjct: 1 MISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTK 60
#
# Query: 61 DKPEEHGLKTLEILKDEDVPEDVLNAILAHCEKKTPETLMEKALYAVDPTTGFIVAAALI 120
# DKPEEHGLKTLEILKDEDVPEDVLNAILAHCEKKTPETLMEKALYAVDPTTGFIVAAALI
# Sbjct: 61 DKPEEHGLKTLEILKDEDVPEDVLNAILAHCEKKTPETLMEKALYAVDPTTGFIVAAALI 120
#
# Query: 121 RPEKKLDVIDVDFLLRRFKEKAFAKGASREQMRTCENFGLSLEKFLEISLEAMKTIASEL 180
# RPEKKLDVIDVDFLLRRFKEKAFAKGASREQMRTCENFGLSLEKFLEISLEAMKTIASEL
# Sbjct: 121 RPEKKLDVIDVDFLLRRFKEKAFAKGASREQMRTCENFGLSLEKFLEISLEAMKTIASEL 180
#
# Query: 181 GL 182
# GL
# Sbjct: 181 GL 182
#
#
# >AF0032
# Length = 234
#
# Score = 120 bits (300), Expect = 2e-27
# Identities = 73/183 (39%), Positives = 110/183 (59%), Gaps = 3/183 (1%)
#
# Query: 2 ISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKD 61
# I+ +ELLK +V+ + L+KHC+A AVM++LARE EDEEKW G+LHD+DY+ T+
# Sbjct: 52 ITSMEPLELLKKYVRDEKLIKHCIATAAVMKSLARELGEDEEKWWTIGILHDIDYEQTQG 111
#
# Query: 62 KPEEHGLKTLEILKDEDVPEDVLNAILAHCEK--KTPETLMEKALYAVDPTTGFIVAAAL 119
# E+HGL EIL E V E++ + H E +E AL A D +G ++A AL
# Sbjct: 112 DMEKHGLVGAEILLKEGVEEEIAEVVKRHNHMLFGDYEKPVEIALQAADSVSGLVIACAL 171
#
# Query: 120 IRPEKKLDVIDVDFLLRRFKEKAFAKGASREQMRTCENFGLSLEKFLEISLEAMKTIASE 179
# ++ K +V + ++FKEK+FA G R+++R E G+ LEK E+++ + + E
# Sbjct: 172 VKGGKITEVTP-KTVKKKFKEKSFAAGCDRDRIRMIEKLGMPLEKLYEVAIRGLTEVKDE 230
#
# Query: 180 LGL 182
# LGL
# Sbjct: 231 LGL 233
#
#
# >DR2421
# Length = 205
#
# Score = 110 bits (275), Expect = 2e-24
# Identities = 67/177 (37%), Positives = 104/177 (57%), Gaps = 7/177 (3%)
#
# Query: 2 ISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKD 61
# ++R+ A L+ H +++L +H L E MR AR + EDEE + + GLLHD DY+
# Sbjct: 30 MNRDEAYALMLEHTPSESLQRHMLNVETAMRWYARHWGEDEETYAVTGLLHDFDYEL--- 86
#
# Query: 62 KPEEHGLKTLEILKDE-DVPEDVLNAILAHCE-KKTPETL-MEKALYAVDPTTGFIVAAA 118
# PEEH + L++ D ++L+AI+ H TP T + + L+AVD TG I AAA
# Sbjct: 87 HPEEHPTWGVTYLRERTDASPEILDAIMGHAAYTGTPRTTRLAQTLFAVDELTGLIQAAA 146
#
# Query: 119 LIRPEKKLDVIDVDFLLRRFKEKAFAKGASREQMRT-CENFGLSLEKFLEISLEAMK 174
# LIRP+K + +++ L +RFK K FA G +R+++R E G+ L++ + L AM+
# Sbjct: 147 LIRPDKDVRGVELSSLKKRFKNKGFAAGVNRDEVRQGAEELGVDLDEHFQNVLTAMQ 203
#
#
# >SP1746
# Length = 197
#
# Score = 38.1 bits (87), Expect = 0.011
# Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
#
# Query: 3 SRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHD 53
# SRE +E + + K L HCL E LA+ F D EK LAGLLHD
# Sbjct: 10 SREALLEKMAELLPEKRLT-HCLGVERAAMELAQRFGVDVEKASLAGLLHD 59
#
#
# >CAC1263
# Length = 189
#
# Score = 37.4 bits (85), Expect = 0.017
# Identities = 38/130 (29%), Positives = 52/130 (39%), Gaps = 23/130 (17%)
#
# Query: 1 MISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTK 60
# M S ++ + L ++ K KH L LA +NED EK +AGL+HD
# Sbjct: 1 MWSYDKITDYLMNNLGEKRY-KHSLGVMDTAVRLAGIYNEDTEKARIAGLVHDCAKKLPG 59
#
# Query: 61 DKPEEHGLKTLEILKDEDV----------------------PEDVLNAILAHCEKKTPET 98
# +K E L DED+ EDVLNAI H + +
# Sbjct: 60 EKIIEICTNEGYELGDEDIRNSYLLHGLAGRILAKKVIGIDDEDVLNAIEFHTTGRPNMS 119
#
# Query: 99 LMEKALYAVD 108
# L+EK +Y D
# Sbjct: 120 LLEKIIYIAD 129
#
#
# >Ta0931_2
# Length = 166
#
# Score = 37.4 bits (85), Expect = 0.018
# Identities = 23/83 (27%), Positives = 44/83 (52%), Gaps = 2/83 (2%)
#
# Query: 8 MELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHG 67
# ++LLK + ++ L++H A E + +A N D+ LLHD+ T+ +H
# Sbjct: 3 LDLLKKYGASEQLIEHVKAVEGLALKIAERCNADKRVIVAGSLLHDI--GRTRTNGIDHA 60
#
# Query: 68 LKTLEILKDEDVPEDVLNAILAH 90
# + EIL+ E++ + V++A+ H
# Sbjct: 61 VAGAEILRSENIHDSVVSAVERH 83
#
#
# >BH1327
# Length = 187
#
# Score = 36.6 bits (83), Expect = 0.034
# Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 32/133 (24%)
#
# Query: 2 ISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKD 61
# ++R +A++L+K H+ T++ +H + LA+ + D++K LA + H DY +D
# Sbjct: 1 MNRGKALQLVKPHL-TEHRYQHTIGVMETAIDLAKLYGADQQKAELAAIFH--DYAKFRD 57
#
# Query: 62 KPEEHGLKTL--EILKDEDV------------------------PEDVLNAILAHCEKKT 95
# K E ++TL E L +D+ EDVL AI H +
# Sbjct: 58 KNE---MRTLIREKLSQQDILFYGDELLHAPCGAYYVREEVGIEDEDVLQAIRFHTTGRP 114
#
# Query: 96 PETLMEKALYAVD 108
# +L+EK ++ D
# Sbjct: 115 NMSLLEKIIFLAD 127
#
#
# >BB0504
# Length = 510
#
# Score = 34.7 bits (78), Expect = 0.11
# Identities = 44/171 (25%), Positives = 72/171 (41%), Gaps = 11/171 (6%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDL--DYDYTKDKPEEHGLKTLEILK 75
# +N++ H + LA+E D A LLHD+ + D E H + E+ +
# Sbjct: 322 QNVLSHSKETAIIGEILAKEMKLDPVVVKRACLLHDIGKGMESISDNSEGHAITGAELAQ 381
#
# Query: 76 DEDVPEDVLNAILAHCEKKTPETL------MEKALYAVDPTTGFIVAAALIRPEKKLDVI 129
# E V+NAI AH + PE+L + A+ A P I K+L+ I
# Sbjct: 382 SCGESEIVVNAIAAHHNEVKPESLEAIVVQIADAISASRPGARRESLNNYINRLKRLEDI 441
#
# Query: 130 DVDFLLRRFKEKAFAKGASREQMRTCENFGLSLEKFLEISLEAMKTIASEL 180
# F +K +A A RE +N ++ EK + ++ + K I +E+
# Sbjct: 442 AYSF---EGVQKCYAIQAGREVRIIVDNALINDEKSILLARDIAKKIEAEM 489
#
#
# >SA1129
# Length = 519
#
# Score = 34.3 bits (77), Expect = 0.15
# Identities = 25/83 (30%), Positives = 39/83 (46%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDE 77
# +N++KH + + LA E EDE AGLLHD+ + H +E+ K
# Sbjct: 333 QNVLKHSIEVAHLASMLAAELGEDETLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKY 392
#
# Query: 78 DVPEDVLNAILAHCEKKTPETLM 100
# E V+NAI +H P +++
# Sbjct: 393 GENETVINAIHSHHGDVEPTSII 415
#
#
# >SPy0309
# Length = 197
#
# Score = 33.9 bits (76), Expect = 0.18
# Identities = 34/114 (29%), Positives = 47/114 (40%), Gaps = 33/114 (28%)
#
# Query: 22 KHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEE---------------- 65
# KH L E +LA + + +K GLA LLH DY K+ P++
# Sbjct: 28 KHVLGVEKAALSLAECYGCNPDKAGLAALLH----DYAKECPDQVFLDLIDKYQLSPELA 83
#
# Query: 66 -------HGL----KTLEILKDEDVPEDVLNAILAHCEKKTPETLMEKALYAVD 108
# HG+ K E L +D +D+L AI H TL++K LY D
# Sbjct: 84 KWNNNVWHGMVGIYKIQEDLGLKD--KDILRAIEIHTVGAAEMTLLDKVLYVAD 135
#
#
# >L26998
# Length = 196
#
# Score = 33.9 bits (76), Expect = 0.20
# Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
#
# Query: 2 ISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHD 53
# +SRE + + + VK K+ +H L E ALA+++ D K LAGLLHD
# Sbjct: 10 LSREDLLAKIASMVK-KSRFEHMLGVEKAAIALAQKYEVDPHKASLAGLLHD 60
#
#
# >SSO1322
# Length = 333
#
# Score = 33.9 bits (76), Expect = 0.22
# Identities = 19/53 (35%), Positives = 29/53 (53%), Gaps = 3/53 (5%)
#
# Query: 79 VPEDVLNAILAHCEKKTPETLMEKALYAVDPTTGFIVAAALIRPEKKLDVIDV 131
# +P++V+ + EKK L K + +D +G+ VA LIRP K +D I V
# Sbjct: 78 IPDEVMKEVY---EKKIAPVLQGKKEFVLDFASGYNVAFGLIRPPKSVDTIMV 127
#
#
# >MJ0778
# Length = 169
#
# Score = 33.5 bits (75), Expect = 0.27
# Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
#
# Query: 5 ERAMELLKTHVKTKNLVKHCLAAEAVMRALA-----REFNEDEEKWGLAGLLHDLDYDYT 59
# E+A+ +LK ++ ++N+V+HCLA LA + + D E L GLLHD+ T
# Sbjct: 4 EKALSILK-NLCSENVVEHCLAVSEYAYELALAIKNKGYEVDVELVRLGGLLHDIGRSRT 62
#
# Query: 60 KDKPEEHGLKTLEILKD 76
# EHG+ EIL++
# Sbjct: 63 HGI--EHGVVGAEILRE 77
#
#
# >aq_1732
# Length = 558
#
# Score = 33.5 bits (75), Expect = 0.27
# Identities = 47/170 (27%), Positives = 72/170 (41%), Gaps = 9/170 (5%)
#
# Query: 17 TKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKD 76
# ++N++ H + +A E D + AGLLHD+ + + H +E+ +
# Sbjct: 371 SQNVLLHSKEVAYIAGLMAEELGLDAKLARRAGLLHDIGKAISHELGGSHTDIGVELARK 430
#
# Query: 77 EDVPEDVLNAILAHCEK---KTPETLM---EKALYAVDPTTGFIVAAALIRPEKKLDVID 130
# P+ V+NAI AH E+ + PE + AL A P A IR +KL+ I
# Sbjct: 431 YGEPDAVINAIRAHHEEEPVRYPEVALVCAADALSAARPGARRETLEAYIRRLEKLEEIV 490
#
# Query: 131 VDFLLRRFKEKAFAKGASREQMRTCENFGLSLEKFLEISLEAMKTIASEL 180
# F + A+A A RE +S E+ +S E K I EL
# Sbjct: 491 KSF---KGVANAYAVQAGREVRVIVNPEEISDEEAYLLSKEIPKKIEEEL 537
#
#
# >FN1913
# Length = 508
#
# Score = 33.1 bits (74), Expect = 0.32
# Identities = 23/95 (24%), Positives = 42/95 (44%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDE 77
# +N++ H + + +A E + E GLLHD+ + H + E +K
# Sbjct: 322 QNVLTHSIEVAKIASTMAAEIGANVELAKRGGLLHDIGKVLVNEIETSHAIVGGEFIKKF 381
#
# Query: 78 DVPEDVLNAILAHCEKKTPETLMEKALYAVDPTTG 112
# +DV+NA++AH + ET+ + A D +
# Sbjct: 382 GEKQDVINAVMAHHNEVEFETVEAILVQAADAVSA 416
#
#
# >PH1292
# Length = 266
#
# Score = 33.1 bits (74), Expect = 0.36
# Identities = 30/105 (28%), Positives = 41/105 (38%), Gaps = 10/105 (9%)
#
# Query: 80 PEDVLNAILAHCE-KKTPETLMEKALYAVDPTT---------GFIVAAALIRPEKKLDVI 129
# PED+ + C P L+EK + P T GF +A R DV
# Sbjct: 161 PEDIDYPVCLECRLNGYPCVLLEKGEPCLGPVTRAGCNARCPGFGIACIGCRGAIGYDVA 220
#
# Query: 130 DVDFLLRRFKEKAFAKGASREQMRTCENFGLSLEKFLEISLEAMK 174
# D L R FKEK K E+M+ +EK +E + +K
# Sbjct: 221 WFDSLARVFKEKGLTKEEIIERMKIFNGHDDRIEKMVEKIFQGVK 265
#
#
# >PAB1786
# Length = 261
#
# Score = 32.7 bits (73), Expect = 0.42
# Identities = 30/105 (28%), Positives = 41/105 (38%), Gaps = 10/105 (9%)
#
# Query: 80 PEDVLNAILAHCE-KKTPETLMEKALYAVDPTT---------GFIVAAALIRPEKKLDVI 129
# PED+ + C P L+EK + P T GF +A R DV
# Sbjct: 156 PEDIDYPVCLECRLNGYPCVLLEKGEPCLGPITRAGCNARCPGFGIACIGCRGAIGYDVA 215
#
# Query: 130 DVDFLLRRFKEKAFAKGASREQMRTCENFGLSLEKFLEISLEAMK 174
# D L R FKEK K E+M+ +EK +E + +K
# Sbjct: 216 WFDSLARVFKEKGLTKEEILERMKIFNGHDERIEKMVEKVFQEVK 260
#
#
# >L132126
# Length = 197
#
# Score = 32.3 bits (72), Expect = 0.53
# Identities = 22/77 (28%), Positives = 37/77 (47%), Gaps = 4/77 (5%)
#
# Query: 5 ERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWG---LAGLLHDLDYDYTKD 61
# E +E + + L +HCLA AL E + E+ +AG+LHD+ Y D
# Sbjct: 10 ELLIEEVNIFLNNDQLFEHCLAVAKTAEALTEELTDSNERRSQAFIAGILHDIGGIYPND 69
#
# Query: 62 -KPEEHGLKTLEILKDE 77
# + E+ + +E+L +E
# Sbjct: 70 QRVEKAEIFNIELLTEE 86
#
#
# >SSO1942
# Length = 332
#
# Score = 32.3 bits (72), Expect = 0.63
# Identities = 18/53 (33%), Positives = 29/53 (53%), Gaps = 3/53 (5%)
#
# Query: 79 VPEDVLNAILAHCEKKTPETLMEKALYAVDPTTGFIVAAALIRPEKKLDVIDV 131
# +P++++ I EKK L K + +D +G+ VA LIRP K +D + V
# Sbjct: 78 IPDEIMKEIY---EKKIAPILEGKKEFVLDFASGYNVAFGLIRPPKNVDTVMV 127
#
#
# >alr2851
# Length = 406
#
# Score = 32.0 bits (71), Expect = 0.71
# Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
#
# Query: 102 KALYAVDPTTGFIVAAALIRPEKKL---------DVIDVDFLLRRFKEKA-FAKGASREQ 151
# +++ VDP+ G I L+RP ++L +++FLL R++ KA F A
# Sbjct: 281 RSILGVDPSGGAIAIGDLVRPGQRLQFHLRDSQASAEELEFLLERYQTKAEFDNAAVGAL 340
#
# Query: 152 MRTCENFGLSL 162
# M +C G L
# Sbjct: 341 MFSCVGRGEGL 351
#
#
# >TM1857
# Length = 508
#
# Score = 30.8 bits (68), Expect = 1.5
# Identities = 20/81 (24%), Positives = 38/81 (46%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDE 77
# +N++ H + + +A E + +K GLLHD+ ++ H E+ +
# Sbjct: 322 QNVLNHSIEVALLAGYMASELGLNADKARRGGLLHDIGKAVDQELEGSHTTIGAELARRY 381
#
# Query: 78 DVPEDVLNAILAHCEKKTPET 98
# ED++N IL+H ++ P T
# Sbjct: 382 GEKEDIINMILSHHGEEEPMT 402
#
#
# >aq_1769
# Length = 482
#
# Score = 30.0 bits (66), Expect = 2.7
# Identities = 17/41 (41%), Positives = 26/41 (62%), Gaps = 3/41 (7%)
#
# Query: 92 EKKTPETLMEKALYAVDPTTGFI---VAAALIRPEKKLDVI 129
# EKK ++++E+ LYA D T I + +A++ PE K DVI
# Sbjct: 37 EKKVKDSIVERKLYAYDATPIPIQRAIPSAVVFPENKEDVI 77
#
#
# >L179243
# Length = 170
#
# Score = 30.0 bits (66), Expect = 2.7
# Identities = 16/44 (36%), Positives = 23/44 (51%)
#
# Query: 13 THVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDY 56
# TH T ++HCL V +A++ + + AGLLHDL Y
# Sbjct: 34 THHYTSTRLQHCLRVSYVSYLIAKKRGLNAKATARAGLLHDLFY 77
#
#
# >PAE0934
# Length = 269
#
# Score = 30.0 bits (66), Expect = 2.8
# Identities = 16/29 (55%), Positives = 19/29 (65%)
#
# Query: 26 AAEAVMRALAREFNEDEEKWGLAGLLHDL 54
# AA AV R AR F++DEE LAG+ DL
# Sbjct: 102 AAVAVFRFFARIFDKDEEGDRLAGIYRDL 130
#
#
# >NMB1150
# Length = 619
#
# Score = 30.0 bits (66), Expect = 2.9
# Identities = 30/112 (26%), Positives = 55/112 (48%), Gaps = 25/112 (22%)
#
# Query: 33 ALAREFN----EDEEKWGLAGLLHDL-DYDYTKDKPEEHGLKTLEILKDEDVPEDVLNAI 87
# A+A+EFN +D G +G+L+ L D D ++E + + + ++
# Sbjct: 69 AIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD--------SIEYMVNAHCADALV--C 118
#
# Query: 88 LAHCEKKTPETLMEKALYAVDPT---------TGFIVAAALIRPEKKLDVID 130
# +++C+K TP L+ A+ PT G ++ A I+PE++LD+ID
# Sbjct: 119 ISNCDKITPGMLI-AAMRLNIPTIFVSGGPMEAGKVIGVANIQPERRLDLID 169
#
#
# >NMB1188
# Length = 619
#
# Score = 30.0 bits (66), Expect = 2.9
# Identities = 30/112 (26%), Positives = 55/112 (48%), Gaps = 25/112 (22%)
#
# Query: 33 ALAREFN----EDEEKWGLAGLLHDL-DYDYTKDKPEEHGLKTLEILKDEDVPEDVLNAI 87
# A+A+EFN +D G +G+L+ L D D ++E + + + ++
# Sbjct: 69 AIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD--------SIEYMVNAHCADALV--C 118
#
# Query: 88 LAHCEKKTPETLMEKALYAVDPT---------TGFIVAAALIRPEKKLDVID 130
# +++C+K TP L+ A+ PT G ++ A I+PE++LD+ID
# Sbjct: 119 ISNCDKITPGMLI-AAMRLNIPTIFVSGGPMEAGKVIGVANIQPERRLDLID 169
#
#
# >APE2338
# Length = 316
#
# Score = 30.0 bits (66), Expect = 3.0
# Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
#
# Query: 45 WGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDEDVPEDVLNAILAHCEKKTPETLMEKAL 104
# W ++ H D G +LE L DE PE + A + H EK P T +
# Sbjct: 138 WSISRTFHGRDVFAPAGALIAAGHASLEELGDEIEPERMKRASIDHVEKLGPSTFRATVV 197
#
# Query: 105 YAVDPTTGFIVAAALIRPEK 124
# Y +D F A IRP+K
# Sbjct: 198 Y-IDK---FGNVALSIRPKK 213
#
#
# >NMA1361
# Length = 619
#
# Score = 30.0 bits (66), Expect = 3.0
# Identities = 30/112 (26%), Positives = 55/112 (48%), Gaps = 25/112 (22%)
#
# Query: 33 ALAREFN----EDEEKWGLAGLLHDL-DYDYTKDKPEEHGLKTLEILKDEDVPEDVLNAI 87
# A+A+EFN +D G +G+L+ L D D ++E + + + ++
# Sbjct: 69 AIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD--------SIEYMVNAHCADALV--C 118
#
# Query: 88 LAHCEKKTPETLMEKALYAVDPT---------TGFIVAAALIRPEKKLDVID 130
# +++C+K TP L+ A+ PT G ++ A I+PE++LD+ID
# Sbjct: 119 ISNCDKITPGMLI-AAMRLNIPTIFVSGGPMEAGKVIGVANIQPERRLDLID 169
#
#
# >slr1885
# Length = 192
#
# Score = 29.6 bits (65), Expect = 3.3
# Identities = 39/136 (28%), Positives = 52/136 (37%), Gaps = 26/136 (19%)
#
# Query: 2 ISRERAMELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKD 61
# + R R + L+ +V + L H L E A D K G AGLLHDL +
# Sbjct: 4 LDRSRVIHWLQENVSPQRL-DHILGVEQTAVQWAPLHKVDPIKAGQAGLLHDLAKFFPPT 62
#
# Query: 62 K----PEEHGLKTLEILK------DEDVPE------------DVLNAILAHCEKKTPETL 99
# K +EH L IL+ DV DVL AI H P L
# Sbjct: 63 KLLVIAKEHNLPLDPILQATPHLIHADVSAIIAAEEFGVDDPDVLKAIRCHTLGAVPMDL 122
#
# Query: 100 MEKALY---AVDPTTG 112
# + ++ A++PT G
# Sbjct: 123 LSCLIFVADALEPTRG 138
#
#
# >FN0607
# Length = 193
#
# Score = 29.6 bits (65), Expect = 3.4
# Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
#
# Query: 9 ELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHD----LDYDYTKD 61
# E++K+ + K V H L + LA+ +N D EK +A LLHD +D +Y K+
# Sbjct: 10 EIVKSKMSLKRFV-HTLGVVEMSEKLAKIYNADIEKCKVAALLHDICKEMDMEYIKN 65
#
#
# >UU085
# Length = 473
#
# Score = 29.6 bits (65), Expect = 3.9
# Identities = 23/91 (25%), Positives = 38/91 (41%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDE 77
# +N++ H L +A+ N D K A HD+ + +H L I K
# Sbjct: 283 QNILSHSLEVAEYAERIAKLINIDPIKAKKAAFFHDIGKTIDFESDLDHVEAGLLIAKKF 342
#
# Query: 78 DVPEDVLNAILAHCEKKTPETLMEKALYAVD 108
# ++ + + NAI +H K P T+ + VD
# Sbjct: 343 NLDDYIYNAIESHHNKVIPTTIYGALVKIVD 373
#
#
# >RSc2515
# Length = 402
#
# Score = 29.6 bits (65), Expect = 4.2
# Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
#
# Query: 8 MELLKTHVKTKNLVKHCLAAEAVMRALARE--FNEDEEK-WGLAGLLHDL 54
# + L + K + H +A A+M AL R+ ++DE + GLAGLLHD+
# Sbjct: 148 VSLARLKTKDRYTFLHSVAVCALMVALGRQLGLSDDEVRDAGLAGLLHDI 197
#
#
# >MG130
# Length = 484
#
# Score = 29.3 bits (64), Expect = 4.3
# Identities = 20/81 (24%), Positives = 33/81 (40%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDE 77
# +N++ H L + LA D E GLLHD+ + E H + ++ +
# Sbjct: 291 QNVLSHSLETAFLTAHLAALIELDSELSLKCGLLHDIGKSNDDNGKESHTITGAKLAEQF 350
#
# Query: 78 DVPEDVLNAILAHCEKKTPET 98
# +P+D+ I H K T
# Sbjct: 351 QLPDDIKYTIANHHNKHIDNT 371
#
#
# >Cj1209
# Length = 517
#
# Score = 29.3 bits (64), Expect = 5.2
# Identities = 26/91 (28%), Positives = 38/91 (41%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDE 77
# +N + H L + +A E DE AG+LHD+ T D H E+ K
# Sbjct: 331 QNALAHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRY 390
#
# Query: 78 DVPEDVLNAILAHCEKKTPETLMEKALYAVD 108
# V+NAI AH + ++ A+ A D
# Sbjct: 391 KEHPVVINAIYAHHGHEEATSIESAAVCAAD 421
#
#
# >Cj1715
# Length = 176
#
# Score = 29.3 bits (64), Expect = 5.4
# Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
#
# Query: 66 HGLKTLEILK-DEDVPEDVLNAILAHCEKKTPETLMEKALYAV---DPTTGFIVAAALIR 121
# + +KT+ + DE+ P +++ E + + LY D GFI +
# Sbjct: 26 NAMKTMNFHQWDENYPNEIV----------FQEDIQAQELYVFKENDEILGFICINEKFK 75
#
# Query: 122 PEKKLDVI------DVDFLLRRF--KEKAFAKGASREQMRTCENFGLSLEK 164
# PE VI D F L R K+ A KG +++ + CENF L K
# Sbjct: 76 PEFYKQVIFNKNYDDKAFYLHRLAVKQNAKGKGVAQKLLNFCENFALENHK 126
#
#
# >SPAC630.05
# Length = 743
#
# Score = 29.3 bits (64), Expect = 5.4
# Identities = 18/56 (32%), Positives = 28/56 (49%), Gaps = 6/56 (10%)
#
# Query: 45 WGLAGLLHDLDYDYTKDKPEEH-GLKTLEILKDEDVPEDVLNAILAHCEKKTPETL 99
# WG+ GL+ L +++ +D+ H L TL +L + PE + AH EK L
# Sbjct: 552 WGMVGLMKRLHFNFLRDQSGMHRQLDTLRLLIEFMDPE-----LFAHLEKTDSSNL 602
#
#
# >CAC1816
# Length = 514
#
# Score = 28.9 bits (63), Expect = 6.4
# Identities = 25/91 (27%), Positives = 39/91 (42%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDE 77
# +N++KH + + +A E D AGLLHD+ + H L E+ K
# Sbjct: 328 QNVLKHSIEVSYLAGFMAAELGIDPTFAKRAGLLHDIGKAVDHEVEGPHALIGAEVSKKY 387
#
# Query: 78 DVPEDVLNAILAHCEKKTPETLMEKALYAVD 108
# ++NAI AH P++L + A D
# Sbjct: 388 HELPLIVNAIGAHHGDVEPQSLEAILVQAAD 418
#
#
# >DR2462
# Length = 572
#
# Score = 28.9 bits (63), Expect = 6.9
# Identities = 20/83 (24%), Positives = 39/83 (46%)
#
# Query: 17 TKNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKD 76
# ++N++KH + + +A E D AGL+HD+ ++ H + + +
# Sbjct: 385 SQNVLKHSVQVAHLTGIMADELGLDAALARRAGLMHDVGKSIDREIEGTHVEIGINLARR 444
#
# Query: 77 EDVPEDVLNAILAHCEKKTPETL 99
# P +V++AI H + + ETL
# Sbjct: 445 FGEPAEVIDAIAHHHDPENGETL 467
#
#
# >PA4108
# Length = 414
#
# Score = 28.5 bits (62), Expect = 7.4
# Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
#
# Query: 8 MELLKTHVKTKNLVKHCLAAEAVMRALAREFNEDE---EKWGLAGLLHDL 54
# + L++ + H +A A+M ALAR+ + + GLAGLLHD+
# Sbjct: 145 LSLVRLKTSDEYTYMHSVAVCALMIALARQLELPDPLVREAGLAGLLHDI 194
#
#
# >PH0999
# Length = 180
#
# Score = 28.5 bits (62), Expect = 7.9
# Identities = 18/50 (36%), Positives = 26/50 (52%)
#
# Query: 101 EKALYAVDPTTGFIVAAALIRPEKKLDVIDVDFLLRRFKEKAFAKGASRE 150
# E+AL VD F+ AL PE + V+ +R+FKEK A+R+
# Sbjct: 3 EEALIVVDMQRDFMPGGALPVPEGDKIIPKVNEYIRKFKEKGALIVATRD 52
#
#
# >SA1825
# Length = 113
#
# Score = 28.5 bits (62), Expect = 7.9
# Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
#
# Query: 2 ISRERAMELLKTHVKTKNLVKHC----LAAEAVMRALAREFNEDEEKWGLAGLLHDLDYD 57
# I+ + L H++ N++K+ + ++ L E+N E+W L +++ L YD
# Sbjct: 4 IAEKETYHLPTEHLQVFNVIKNTSNKYITKTKILNQLGYEYNSSNERW-LRRVINSLVYD 62
#
# Query: 58 Y-----TKDKPEEHG 67
# Y KP E G
# Sbjct: 63 YGYPIGCSYKPSERG 77
#
#
# >BS_yvhJ
# Length = 391
#
# Score = 28.5 bits (62), Expect = 8.1
# Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
#
# Query: 142 AFAKGASREQMRTCENF-GLSLEKFLEISLEAMKTIASELG 181
# A++KG E + T ENF + ++K++ + + K + +E+G
# Sbjct: 138 AYSKGGKDETVETVENFLQIPIDKYVTVDFDGFKDVINEVG 178
#
#
# >mll5763
# Length = 395
#
# Score = 28.5 bits (62), Expect = 8.1
# Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
#
# Query: 58 YTKDKPEEHGLKTL--EILKDEDVPEDVLNAILAHCEKKTPETLMEKALY 105
# Y KD+ HG + IL D DV+ A+LAH +K +A Y
# Sbjct: 324 YGKDEVTAHGFRVTASTILNARDYDPDVIEAVLAHQDKNAIRRTYNRATY 373
#
#
# >MK0194
# Length = 419
#
# Score = 28.1 bits (61), Expect = 9.9
# Identities = 28/95 (29%), Positives = 41/95 (42%), Gaps = 5/95 (5%)
#
# Query: 42 EEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDEDVPEDVLNAILAHCEKKTPETLME 101
# EE GLAGLLHD+ + PE + L + ED+ V +L + E +E
# Sbjct: 89 EEVLGLAGLLHDVGHPPFSHVPEPLLEEELGV-DHEDIGRAVAKVVLERADAMDVEVTLE 147
#
# Query: 102 KALYAVDPTTGFIVAAALIRPEKKLDVIDVDFLLR 136
# A D TG + + L V +D+L+R
# Sbjct: 148 VAFGPGDGWTGVLHSVI----AGNLGVDRLDYLMR 178
#
#
# >jhp0697
# Length = 529
#
# Score = 28.1 bits (61), Expect = 9.9
# Identities = 19/73 (26%), Positives = 35/73 (47%)
#
# Query: 18 KNLVKHCLAAEAVMRALAREFNEDEEKWGLAGLLHDLDYDYTKDKPEEHGLKTLEILKDE 77
# +N ++H + +A + D++ AG+LHD+ T++ +H +E+ K
# Sbjct: 340 QNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRH 399
#
# Query: 78 DVPEDVLNAILAH 90
# V+NAI AH
# Sbjct: 400 KEDPVVINAIYAH 412
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.318 0.135 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,070,042
Number of Sequences: 192987
Number of extensions: 847255
Number of successful extensions: 2676
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 2640
Number of HSP's gapped (non-prelim): 73
length of query: 182
length of database: 59,019,183
effective HSP length: 103
effective length of query: 79
effective length of database: 39,141,522
effective search space: 3092180238
effective search space used: 3092180238
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
S2: 62 (28.5 bits)