Vibrio cholerae O1 biovar eltor str. N16961 chromosome II

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220303-220402 (1-100) 220403-220502 (101-200) [220503-220602 (201-300)] 220603-220702 (301-400) 220703-220802 (401-500)
220803-220902 (501-600) 220903-221002 (601-700) 221003-221102 (701-800) 221103-221202 (801-900) 221203-221302 (901-1000)
221303-221395 (1001-1093)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220503 hypothetical VCA0202 IS1004 transposase
similar to PID:1054866 PID:2271024; identified by sequence similarity; putative
genbank 15600972 NP_232602.1 145 219825 220262
220504 hypothetical VCA0204 ATP-dependent RNA helicase RhlE
similar to GB:L02123 SP:P25888 PID:560801 GB:U00096 PID:1651360; identified by sequence similarity; putative
genbank 15600973 NP_232603.1 451 220767 222122
220505 hypothetical VCA0205 anaerobic C4-dicarboxylate transporter
functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB
genbank 15600974 NP_232604.1 442 222312 223640
220506 hypothetical VCA0206 hypothetical protein
identified by Glimmer2; putative
genbank 15600975 NP_232605.1 43 223751 223882
220507 nadE hypothetical VCA0207 NAD(+) synthetase
catalyzes the formation of NAD(+) from deamido-NAD(+) using ammonia
genbank 15600976 NP_232606.1 276 223891 224721
220508 hypothetical VCA0208 nicotinic acid mononucleotide adenylyltransferase
catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP
genbank 15600977 NP_232607.1 175 224824 225351
220509 hypothetical VCA0209 hypothetical protein
identified by Glimmer2; putative
genbank 15600978 NP_232608.1 60 225302 225484
220510 hypothetical VCA0210 response regulator, putative
similar to PID:558266; identified by sequence similarity; putative
genbank 15600979 NP_232609.1 522 225591 227159
220511 hypothetical VCA0211 sensory box sensor histidine kinase
similar to PID:561864; identified by sequence similarity; putative
genbank 15600980 NP_232610.1 648 227217 229163
220512 hypothetical VCA0212 hypothetical protein
identified by Glimmer2; putative
genbank 15600981 NP_232611.1 349 229338 230387
220513 hypothetical VCA0213 hypothetical protein
identified by Glimmer2; putative
genbank 15600982 NP_232612.1 529 230465 232054
220514 hypothetical VCA0214 multidrug resistance protein D
similar to GB:L10328 SP:P31442 PID:290522 GB:U00096 PID:1790107; identified by sequence similarity; putative
genbank 15600983 NP_232613.1 414 232449 233693
220515 hypothetical VCA0215 hypothetical protein
identified by Glimmer2; putative
genbank 15600984 NP_232614.1 52 233694 233852
220516 hypothetical VCA0216 hypothetical protein
identified by Glimmer2; putative
genbank 15600985 NP_232615.1 88 233907 234173
220517 hypothetical VCA0217 GGDEF family protein
similar to GB:AE000657; identified by sequence similarity; putative
genbank 15600986 NP_232616.1 359 234164 235243
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220518 hypothetical VCA0218 thermolabile hemolysin
similar to GB:M36437 SP:Q99289 PID:155178; identified by sequence similarity; putative
genbank 15600987 NP_232617.1 418 235364 236620
220519 hypothetical VCA0219 haemolysin
similar to GP:587586; identified by sequence similarity; putative
genbank 15600988 NP_232618.1 741 237590 239815
220520 hypothetical VCA0220 hemolysin secretion protein HylB
similar to SP:P15492 GB:X16945 PID:48362 PID:2190531; identified by sequence similarity; putative
genbank 15600989 NP_232619.1 548 240114 241760
220521 hypothetical VCA0221 lactonizing lipase
similar to PID:2193963; identified by sequence similarity; putative
genbank 15600990 NP_232620.1 339 242027 243046
220522 hypothetical VCA0222 lipase chaperone
similar to PID:2193964; identified by sequence similarity; putative
genbank 15600991 NP_232621.1 284 243056 243910
220523 hypothetical VCA0223 protease
similar to PID:2193965; identified by sequence similarity; putative
genbank 15600992 NP_232622.1 918 243986 246742
220524 hypothetical VCA0224 hypothetical protein
identified by Glimmer2; putative
genbank 15600993 NP_232623.1 101 246827 247132
220525 hypothetical VCA0225 hypothetical protein
identified by Glimmer2; putative
genbank 15600994 NP_232624.1 254 247686 248450
220526 hypothetical VCA0226 hypothetical protein
identified by Glimmer2; putative
genbank 15600995 NP_232625.1 40 248610 248732
220527 hypothetical VCA0227 iron(III) ABC transporter, periplasmic iron-compound-binding protein
similar to GB:AL009126; identified by sequence similarity; putative
genbank 15600996 NP_232626.1 333 248766 249767
220528 hypothetical VCA0228 iron(III) ABC transporter, permease protein
similar to GB:AL009126; identified by sequence similarity; putative
genbank 15600997 NP_232627.1 312 249820 250758
220529 hypothetical VCA0229 iron(III) ABC transporter, permease protein
similar to GB:AL009126; identified by sequence similarity; putative
genbank 15600998 NP_232628.1 316 250748 251698
220530 hypothetical VCA0230 iron(III) ABC transporter, ATP-binding protein
similar to GB:AL009126; identified by sequence similarity; putative
genbank 15600999 NP_232629.1 254 251701 252465
220531 hypothetical VCA0231 transcriptional regulator, AraC/XylS family
similar to SP:P27029 GB:X57299 PID:47906; identified by sequence similarity; putative
genbank 15601000 NP_232630.1 358 252511 253587
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220532 hypothetical VCA0233 hypothetical protein
identified by Glimmer2; putative
genbank 15601001 NP_232631.1 106 255650 255970
220533 hypothetical VCA0234 hypothetical protein
identified by Glimmer2; putative
genbank 15601002 NP_232632.1 38 255986 256102
220534 hypothetical VCA0235 acetate/propionate kinase
AckA; TdcD; acetate/propionate kinase; TdcD has both and functions in anerobic threonine catabolism; AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conver
genbank 15601003 NP_232633.1 397 256240 257433
220535 hypothetical VCA0236 hypothetical protein
identified by Glimmer2; putative
genbank 15601004 NP_232634.1 98 257514 257810
220536 hypothetical VCA0237 hypothetical protein
identified by Glimmer2; putative
genbank 15601005 NP_232635.1 189 257928 258497
220537 hypothetical VCA0238 sensor histidine kinase
similar to PID:1064813 GB:AL009126; identified by sequence similarity; putative
genbank 15601006 NP_232636.1 549 258742 260391
220538 hypothetical VCA0239 transcriptional regulator
similar to SP:Q44006; identified by sequence similarity; putative
genbank 15601007 NP_232637.1 224 260372 261046
220539 hypothetical VCA0240 hypothetical protein
identified by Glimmer2; putative
genbank 15601008 NP_232638.1 209 261049 261678
220540 hypothetical VCA0241 hexulose-6-phosphate isomerase SgbU, putative
similar to GB:L42023 SP:P44990 PID:1006252 PID:1221141 PID:1205275; identified by sequence similarity; putative
genbank 15601009 NP_232639.1 294 261638 262522
220541 hypothetical VCA0242 hexulose-6-phosphate synthase SgbH, putative
similar to GB:L42023 SP:P44988 PID:1006248 PID:1221139 PID:1205273; identified by sequence similarity; putative
genbank 15601010 NP_232640.1 215 262534 263181
220542 hypothetical VCA0243 hypothetical protein
identified by Glimmer2; putative
genbank 15601011 NP_232641.1 273 263187 264008
220543 hypothetical VCA0244 L-ribulose-5-phosphate 4-epimerase
catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate
genbank 15601012 NP_232642.1 230 264014 264706
220544 hypothetical VCA0245 PTS system, IIA component
similar to GB:U14003 SP:P39303 PID:537036 GB:U00096 PID:2367359; identified by sequence similarity; putative
genbank 15601013 NP_232643.1 168 264715 265221
220545 ulaA hypothetical VCA0246 ascorbate-specific PTS system enzyme IIC
membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr
genbank 15601014 NP_232644.1 586 265319 267079
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220546 hypothetical VCA0247 transcriptional regulator, DeoR family
similar to GB:U14003 SP:P39299 PID:537032 GB:U00096 PID:1790635; identified by sequence similarity; putative
genbank 15601015 NP_232645.1 251 267445 268200
220547 hypothetical VCA0248 hypothetical protein
identified by Glimmer2; putative
genbank 15601016 NP_232646.1 355 268327 269394
220548 hypothetical VCA0249 cytochrome b561, putative
similar to SP:P08732 GB:X07569 PID:41191 GB:U00096 PID:1787687; identified by sequence similarity; putative
genbank 15601017 NP_232647.1 177 269494 270027
220549 hypothetical VCA0250 alpha-amylase
similar to PID:1177849; identified by sequence similarity; putative
genbank 15601018 NP_232648.1 466 270200 271600
220550 hypothetical VCA0251 hypothetical protein
identified by Glimmer2; putative
genbank 15601019 NP_232649.1 38 271740 271856
220551 hypothetical VCA0252 hypothetical protein
identified by Glimmer2; putative
genbank 15601020 NP_232650.1 36 271816 271926
220552 hypothetical VCA0253 antibiotic acetyltransferase
similar to SP:P26838 GB:M80188 PID:150399; identified by sequence similarity; putative
genbank 15601021 NP_232651.1 232 271933 272631
220553 hypothetical VCA0254 hypothetical protein
identified by Glimmer2; putative
genbank 15601022 NP_232652.1 722 273253 275421
220554 hypothetical VCA0255 hypothetical protein
identified by Glimmer2; putative
genbank 15601023 NP_232653.1 276 275510 276340
220555 hypothetical VCA0256 transcriptional regulator
similar to GB:M31794 SP:P45605 PID:149295; identified by sequence similarity; putative
genbank 15601024 NP_232654.1 223 276337 277008
220556 hypothetical VCA0257 sensor histidine kinase
similar to PID:1001492 PID:1001594; identified by sequence similarity; putative
genbank 15601025 NP_232655.1 484 276984 278438
220557 hypothetical VCA0258 hypothetical protein
identified by Glimmer2; putative
genbank 15601026 NP_232656.1 170 278541 279053
220558 hypothetical VCA0259 hypothetical protein
identified by Glimmer2; putative
genbank 15601027 NP_232657.1 42 279096 279224
220559 hypothetical VCA0260 hypothetical protein
identified by Glimmer2; putative
genbank 15601028 NP_232658.1 64 279248 279442
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220560 hypothetical VCA0261 hypothetical protein
identified by Glimmer2; putative
genbank 15601029 NP_232659.1 108 279430 279756
220561 hypothetical VCA0262 hypothetical protein
identified by Glimmer2; putative
genbank 15601030 NP_232660.1 136 279866 280276
220562 hypothetical VCA0263 acetyltransferase, putative
similar to SP:P45473 PID:606096 GB:U00096 PID:1789546; identified by sequence similarity; putative
genbank 15601031 NP_232661.1 180 280382 280924
220563 hypothetical VCA0264 transcriptional regulator, putative
similar to PID:1651704; identified by sequence similarity; putative
genbank 15601032 NP_232662.1 392 280935 282113
220564 hypothetical VCA0265 hypothetical protein
identified by Glimmer2; putative
genbank 15601033 NP_232663.1 126 282297 282677
220565 hypothetical VCA0266 transcriptional regulator, AraC/XylS family
similar to GB:U00096 PID:1788091; identified by sequence similarity; putative
genbank 15601034 NP_232664.1 257 282737 283510
220566 hypothetical VCA0267 multidrug resistance protein D
similar to GB:X78969 PID:474915; identified by sequence similarity; putative
genbank 15601035 NP_232665.1 379 283612 284751
220567 hypothetical VCA0268 methyl-accepting chemotaxis protein
similar to PID:1255679; identified by sequence similarity; putative
genbank 15601036 NP_232666.1 643 285034 286965
220568 hypothetical VCA0269 decarboxylase, group II
similar to GB:L42023 PID:1161418 PID:1221055 PID:1205195 PID:1573971; identified by sequence similarity; putative
genbank 15601037 NP_232667.1 557 286981 288654
220569 hypothetical VCA0270 D-alanyl-D-alanine carboxypeptidase
similar to GB:L42023 SP:P44466 PID:1004158 PID:1221933 PID:1204287; identified by sequence similarity; putative
genbank 15601038 NP_232668.1 389 288819 289988
220570 hypothetical VCA0271 hypothetical protein
identified by Glimmer2; putative
genbank 15601039 NP_232669.1 115 290166 290513
220571 hypothetical VCA0272 hypothetical protein
identified by Glimmer2; putative
genbank 15601040 NP_232670.1 127 290571 290954
220572 hypothetical VCA0273 hypothetical protein
identified by Glimmer2; putative
genbank 15601041 NP_232671.1 44 291097 291231
220573 hypothetical VCA0274 carbonic anhydrase
similar to GP:2773324; identified by sequence similarity; putative
genbank 15601042 NP_232672.1 239 291259 291978
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220574 hypothetical VCA0275 IS1004 transposase
similar to PID:1054866 PID:2271024; identified by sequence similarity; putative
genbank 15601043 NP_232673.1 145 292265 292702
220575 hypothetical VCA0277 glycine cleavage system protein H
with GcvP, GcvT, GcvL catalyzes the degradation of glycine; shuttles the methylamine group of glycine from GcvP to GcvT
genbank 15601044 NP_232674.1 126 295889 296269
220576 hypothetical VCA0278 serine hydroxymethyltransferase
catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
genbank 15601045 NP_232675.1 435 296306 297613
220577 hypothetical VCA0279 transcriptional regulator, HTH_3 family
similar to GB:AE000666; identified by sequence similarity; putative
genbank 15601046 NP_232676.1 207 298001 298624
220578 hypothetical VCA0281 integrase, putative
similar to GP:3294478; identified by sequence similarity; putative
genbank 15601047 NP_232677.1 385 300467 301624
220579 hypothetical VCA0282 IS5 transposase
similar to GB:J01735; identified by sequence similarity; putative
genbank 15601048 NP_232678.1 326 301670 302650
220580 hypothetical VCA0283 hypothetical protein
identified by Glimmer2; putative
genbank 15601049 NP_232679.1 407 302926 304149
220581 hypothetical VCA0284 hypothetical protein
identified by Glimmer2; putative
genbank 15601050 NP_232680.1 176 304670 305200
220582 hypothetical VCA0285 hypothetical protein
identified by Glimmer2; putative
genbank 15601051 NP_232681.1 223 305200 305871
220583 hypothetical VCA0286 hypothetical protein
identified by Glimmer2; putative
genbank 15601052 NP_232682.1 116 305873 306223
220584 hypothetical VCA0287 threonyl-tRNA synthetase
Catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
genbank 15601053 NP_232683.1 642 306492 308420
220585 infC hypothetical VCA0288 initiation factor IF3 genbank 15601864 NP_232684.1 129 308586 308975
220586 rpmI hypothetical VCA0289 50S ribosomal protein L35
similar to GP:3095163; identified by sequence similarity; putative
genbank 15601054 NP_232685.1 64 309079 309273
220587 hypothetical VCA0290 50S ribosomal protein L20
This protein binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit
genbank 15601055 NP_232686.1 117 309315 309668
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220588 hypothetical VCA0291 site-specific recombinase IntI4
similar to GP:3095165; identified by sequence similarity; putative
genbank 15601056 NP_232687.1 320 309750 310712
220589 hypothetical VCA0292 hypothetical protein
identified by Glimmer2; putative
genbank 15601057 NP_232688.1 88 311034 311300
220590 hypothetical VCA0293 hypothetical protein
identified by Glimmer2; putative
genbank 15601058 NP_232689.1 199 311455 312054
220591 hypothetical VCA0294 hypothetical protein
identified by Glimmer2; putative
genbank 15601059 NP_232690.1 124 312716 313090
220592 hypothetical VCA0295 hypothetical protein
identified by Glimmer2; putative
genbank 15601060 NP_232691.1 62 313335 313523
220593 hypothetical VCA0296 hypothetical protein
identified by Glimmer2; putative
genbank 15601061 NP_232692.1 33 313804 313905
220594 hypothetical VCA0297 hypothetical protein
identified by Glimmer2; putative
genbank 15601062 NP_232693.1 60 313887 314069
220595 hypothetical VCA0298 hypothetical protein
identified by Glimmer2; putative
genbank 15601063 NP_232694.1 83 314325 314576
220596 hypothetical VCA0299 hypothetical protein
identified by Glimmer2; putative
genbank 15601064 NP_232695.1 147 314717 315160
220597 hypothetical VCA0300 chloramphenicol acetyltransferase
similar to SP:P26838 GB:M80188 PID:150399; identified by sequence similarity; putative
genbank 15601065 NP_232696.1 209 315311 315940
220598 hypothetical VCA0301 oxidoreductase, short-chain dehydrogenase/reductase family
similar to PID:887852 GB:U00096 PID:1773222 PID:2160242 PID:2367175; identified by sequence similarity; putative
genbank 15601066 NP_232697.1 250 316096 316848
220599 hypothetical VCA0302 hypothetical protein
identified by Glimmer2; putative
genbank 15601067 NP_232698.1 60 317150 317332
220600 hypothetical VCA0303 hypothetical protein
identified by Glimmer2; putative
genbank 15601068 NP_232699.1 134 317510 317914
220601 hypothetical VCA0304 hypothetical protein
identified by Glimmer2; putative
genbank 15601069 NP_232700.1 60 318210 318392
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220602 hypothetical VCA0305 hypothetical protein
identified by Glimmer2; putative
genbank 15601070 NP_232701.1 38 318630 318746


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