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1: AT5G52330 meprin and TRAF homology domain-containing protein / MATH domain-containing protein [ Arabidopsis thaliana ]

GeneID: 835309 updated 07-Nov-2008

[Top][Help]Summary

Primary source
TAIR:AT5G52330
Locus tag
AT5G52330
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis
Also known as
K24M7.6; K24M7_6;

[Top][Help]Genomic regions, transcripts, and products

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Genomic context[Top][Help]

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[Top][Help]General gene information

GeneOntology Provided by TAIR

Function Evidence
molecular_function ND
Process Evidence
biological_process ND
Component Evidence
endomembrane system IEA

mRNA Comments

NM_001036985.1
Supported by ESTs:
NM_124612.2
Supported by ESTs: , Supported by cDNAs:

[Top][Help]General protein information

Names
meprin and TRAF homology domain-containing protein / MATH domain-containing protein
NP_001032062.1
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71320.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974)
NP_200046.1
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71320.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974); contains InterPro domain TRAF-type (InterPro:IPR013322)

[Top][Help]NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

mRNA and Protein(s)

  1. NM_124612.2→NP_200046.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana]

    UniProtKB/TrEMBL
    Q9FHC7
    Conserved Domains (1) summary
    cd00121
    Location:19–142
    Blast Score:246
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the...

  2. NM_001036985.1→NP_001032062.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana]

    UniProtKB/TrEMBL
    Q2V2Z1