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Submitted SNP(ss) Details: ss954268           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-420531
RefSNP(rs#)rs788641
Submitted Batch IDOVLP-000804-1
Submitted DateSep 01, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 1 2000 12:00:00:000AM
Resource Links
GenBank AccessionAC074007.1
AL356953.6
Submitted Gene NameN.D
Submitted Gene IDN.D.
Submitted SNP SynonymsN.D
Submitted linkoutN.D
Submission reportview
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral Allele
SNP Classsingle base
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC074007 SequenceAccession1:AC074007 SequenceVersion1:1 SequenceContigName1:Contig12 SequenceContigPosition1:4369 SequenceLocalName2:AL356953 SequenceAccession2:AL356953 SequenceVersion2:6 SequenceContigName2:Contig40 SequenceContigPosition2:1922 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss954268|allelePos=108|len=495|taxid=9606|alleles='G/A'|mol=Genomic
 ATAGAATTTG TGGACCTCCA GCATGTCTGC AACCCCCTAG AGTTCACAGG CCCTAGTTTG
 AGAAACACTG CAAAAGTGAA TAAGAAAAAA AAAGTGTAAg gccgggc
 R
 cggtggctca cgcctgtaat cccagcactt tgggaggccg aggcaggcgg atcacaaggt
 caggagatcc agaccatcct ggctaacacc atgaaacccc atctctaaaa aaaatacaaa
 aaattagcca ggcgtggtgg cgggcgcctg tagtcccagc tgctcaggag gctgaggcag
 gagaatggcg tgaacccagg aggcagagct tgcagtgagc cgagatcatg ccactgcact
 ccagcctggg caacagagcg agactccatc tcaaaaaaaa aaaaaaaGTG TAAAGCCTGG
 ACTTAGAATT GAAAAGAACA TTAAAGATGA TCTAGTCCAG CCTCTGACTC AGGTAGAAGT
 GCTTTCTCTC CCATTGGGGA CTTTCTG

  Submitted Frequency for ss954268 back to top
There is no frequency submission for ss954268.

  dbSNP summary of Genotypes for ss954268 back to top
No sufficient data to compute Hardy-weinberg probability for ss954268.

  Submitted individual genotype for ss954268 back to top
There is no individual genotype data for ss954268.

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Revised: May 25, 2006 1:38 PM .