BLASTX+BEAUTY Search Results

WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract


RepeatMasker repeats found in sequence:
No Repeats Found.

Reference:  Gish, Warren (1994-1997).  unpublished.
Gish, Warren and David J. States (1993).  Identification of protein coding
regions by database similarity search.  Nat. Genet. 3:266-72.

Notice:  statistical significance is estimated under the assumption that the
equivalent of one entire reading frame in the query sequence codes for protein
and that significant alignments will involve only coding reading frames.

Query=  'D14G09_N09_13.ab1'
        (583 letters)
  Translating both strands of query sequence in all 6 reading frames

Database:  nr
           625,274 sequences; 197,782,623 total letters.


     Observed Numbers of Database Sequences Satisfying
    Various EXPECTation Thresholds (E parameter values)

        Histogram units:      = 7 Sequences     : less than 7 sequences

 EXPECTation Threshold
 (E parameter)
    |
    V   Observed Counts-->
  10000 1863 382 |======================================================
   6310 1481 295 |==========================================
   3980 1186 226 |================================
   2510  960 203 |=============================
   1580  757 139 |===================
   1000  618  92 |=============
    631  526  60 |========
    398  466  54 |=======
    251  412  41 |=====
    158  371  19 |==
    100  352  16 |==
   63.1  336  14 |==
   39.8  322   8 |=
   25.1  314  12 |=
   15.8  302   4 |:
 >>>>>>>>>>>>>>>>>>>>>  Expect = 10.0, Observed = 298  <<<<<<<<<<<<<<<<<
   10.0  298   6 |:
   6.31  292   2 |:
   3.98  290   1 |:
   2.51  289   2 |:
   1.58  287   1 |:
   1.00  286   5 |:
   0.63  281   0 |
   0.40  281   1 |:
   0.25  280   1 |:
   0.16  279   0 |
   0.10  279   0 |
  0.063  279   0 |
  0.040  279   0 |
  0.025  279   1 |:


                                                                     Smallest
                                                                       Sum
                                                     Reading  High  Probability
Sequences producing High-scoring Segment Pairs:        Frame Score  P(N)      N
gi|122087|sp|P02300|H3_PEAHISTONE H3 >gi|81849|pir||S... +3   673  3.6e-65   1
gi|122085|sp|P05203|H3_MAIZEHISTONE H3 >gi|81641|pir|... +3   670  7.5e-65   1
gi|166384|gb|AAA32655.1|(M35867) histone H3 (H3-1.1) ... +3   669  9.6e-65   1
gi|70753|pir||HSPM3histone H3 - garden pea (tentative... +3   668  1.2e-64   1
gi|1362108|pir||S56707histone H3 homolog - common tob... +3   665  2.5e-64   1
gi|122083|sp|P08903|H3_ENCALHISTONE H3 >gi|70751|pir|... +3   662  5.3e-64   1
gi|122070|sp|P08860|H32_ORYSAHISTONE H3 >gi|82483|pir... +3   660  8.6e-64   1
gi|7305139ref|NP_038576.1| histone gene complex 1 [Mu... +3   659  1.1e-63   1
gi|103198|pir||S10097histone H3 - fruit fly (Drosophi... +3   658  1.4e-63   1
gi|4504281ref|NP_003520.1| H3 histone family, member ... +3   658  1.4e-63   1
gi|9506767ref|NP_062342.1| H3 histone, family 2 [Mus ... +3   656  2.3e-63   1
gi|484441|pir||JN0687histone H3 - sea squirt (Styela ... +3   656  2.3e-63   1
gi|122088|sp|P02298|H3_PSAMIHISTONE H3, EMBRYONIC >gi... +3   655  2.9e-63   1
gi|417103|sp|P11105|H32_MEDSAHISTONE H3.2, MINOR >gi|... +3   655  2.9e-63   1
gi|422606|pir||S32638histone H3.l - African clawed fr... +3   655  2.9e-63   1
gi|2119011|pir||I48092histone H3.2 - long-tailed hams... +3   655  2.9e-63   1
gi|7415982|dbj|BAA93627.1|(AB019406) histone H3 [Dros... +3   655  2.9e-63   1
gi|70743|pir||HSRK3histone H3 - striped catshark >gi|... +3   654  3.7e-63   1
gi|12729013ref|XP_010903.1| similar to H3 histone, fa... +3   654  3.7e-63   1
gi|4504279ref|NP_002098.1| H3 histone, family 3A [Hom... +3   653  4.8e-63   1
gi|70749|pir||HSBO3histone H3 - bovine >gi|3080462|em... +3   653  4.8e-63   1
gi|211855|gb|AAA48795.1|(J00869) histone H3 [Gallus g... +3   653  4.8e-63   1
gi|122079|sp|P22843|H3_ACRFOHISTONE H3 >gi|84397|pir|... +3   652  6.1e-63   1
gi|122082|sp|P02299|H3_DROMEHISTONE H3                   +3   652  6.1e-63   1
gi|1708108|sp|Q10453|H33_CAEELHISTONE H3.3 >gi|743981... +3   652  6.1e-63   1
gi|2119013|pir||I49395histone H3.2 protein - shrew mo... +3   651  7.8e-63   1
gi|2116601|dbj|BAA20144.1|(AB003784) Histone H3 [Dros... +3   651  7.8e-63   1
gi|2144744|pir||HSKW3histone H3 - Caenorhabditis eleg... +3   650  9.9e-63   1
gi|70747|pir||HSUR3Mhistone H3, embryonic - sea urchi... +3   650  9.9e-63   1
gi|161319|gb|AAA30003.1|(J01175) histone H3 [Lytechin... +3   649  1.3e-62   1
gi|386772|gb|AAA52651.1|(M26150) histone H3 [Homo sap... +3   649  1.3e-62   1
gi|1079199|pir||S50140histone H3.3 - sea urchin (Para... +3   649  1.3e-62   1
gi|4504283ref|NP_003521.1| H3 histone family, member ... +3   649  1.3e-62   1
gi|7510049|pir||T27037hypothetical protein Y49E10.6 -... +3   649  1.3e-62   1
gi|122089|sp|P06352|H3_STRPUHISTONE H3, EMBRYONIC >gi... +3   647  2.1e-62   1
gi|2119012|pir||I50244histone 3.3A - chicken >gi|2118... +3   647  2.1e-62   1
gi|7522681|gb|AAB27669.2|(S64499) H3 histone [Styela ... +3   647  2.1e-62   1
gi|6686276|sp|P08898|H3_CAEELHISTONE H3                  +3   646  2.6e-62   1
gi|9759615|dbj|BAB11557.1|(AB011479) histone H3 [Arab... +3   645  3.4e-62   1
gi|11513397|pdb|1F66|AChain A, 2.6 A Crystal Structur... +3   645  3.4e-62   1
gi|122090|sp|P08437|H3_VOLCAHISTONE H3 >gi|81287|pir|... +3   644  4.3e-62   1
gi|4504299ref|NP_003484.1| H3 histone family, member ... +3   644  4.3e-62   1
gi|85001|pir||JQ1343histone H3.3 - fruit fly (Drosoph... +3   643  5.5e-62   1
gi|70748|pir||HSUR3Phistone H3, embryonic - sea urchi... +3   642  7.0e-62   1
gi|159967|gb|AAA75395.1|(M36919) histone H3 [Paracent... +3   641  8.9e-62   1
gi|2119018|pir||S59592histone H3 (clone CH-I) - Chlam... +3   641  8.9e-62   1
gi|12730614ref|XP_011165.1| similar to H3 histone, fa... +3   641  8.9e-62   1
gi|484530|pir||JQ1983H3.3 like histone MH921 - mouse     +3   639  1.4e-61   1
gi|10253|emb|CAA24647.1|(V01356) reading frame of H3 ... +3   637  2.4e-61   1
gi|122074|sp|P02302|H32_XENLAHISTONE H3.2                +3   636  3.0e-61   1

Use the  and  icons to retrieve links to Entrez:
E = Retrieve Entrez links (e.g., Medline abstracts, FASTA-formatted sequence reports).
R = Retrieve links to Related sequences (neighbors).

Use the  icon (if present) to retrieve links to the Sequence Retrieval System (SRS).

Use the  icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .

Use the  icon (if present) to retrieve links to the Protein Data Bank database.

WARNING:  Descriptions of 248 database sequences were not reported due to the
          limiting value of parameter V = 50.



 >gi|122087|sp|P02300|H3_PEA  HISTONE H3 >gi|81849|pir||S04520 histone H3 (clone
            pH3c-1) - alfalfa >gi|82609|pir||A26014 histone H3 - wheat
            >gi|19607|emb|CAA31964.1| (X13673) histone H3 (AA 1-136) [Medicago
            sativa] >gi|19609|emb|CAA31965.1| (X13674) histone H3 (AA 1-136)
            [Medicago sativa] >gi|21797|emb|CAA25451.1| (X00937) H3 histone
            [Triticum aestivum] >gi|488565|gb|AAB49545.1| (U09459) histone H3.1
            [Medicago sativa] >gi|2565419|gb|AAB81995.1| (AF026803) histone H3
            [Onobrychis viciifolia]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   Entrez               methylation site                         5
   Entrez               methylation site                         10
   Entrez               acetylation site                         15
   Entrez               methylation site                         15
   Entrez               acetylation site                         19
   Entrez               methylation site                         19
   Entrez               acetylation site                         24
   Entrez               methylation site                         28
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 673 (236.9 bits), Expect = 3.6e-65, P = 3.6e-65
 Identities = 136/136 (100%), Positives = 136/136 (100%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|122085|sp|P05203|H3_MAIZE  HISTONE H3 >gi|81641|pir||S06250 histone H3
            [similarity] - Arabidopsis thaliana >gi|82482|pir||S04099 histone
            H3 (variant H3R-21) - rice >gi|1362194|pir||S57626 histone H3 -
            maize >gi|20251|emb|CAA31969.1| (X13678) histone H3 (AA 1-136)
            [Oryza sativa] >gi|20253|emb|CAA31970.1| (X13680) histone H3 (AA
            1-136) [Oryza sativa] >gi|168493|gb|AAA33471.1| (M36658) histone H3
            (H3C3) [Zea mays] >gi|168495|gb|AAA33472.1| (M13378) histone H3
            [Zea mays] >gi|168497|gb|AAA33473.1| (M13379) histone H3 [Zea mays]
            >gi|168506|gb|AAA66265.1| (M35388) histone H3 [Zea mays]
            >gi|169655|gb|AAA33852.1| (M77493) histone H3 [Petroselinum
            crispum] >gi|169657|gb|AAA33853.1| (M77494) histone H3
            [Petroselinum crispum] >gi|169659|gb|AAA33854.1| (M77495) histone
            H3 [Petroselinum crispum] >gi|387565|gb|AAA32808.1| (M17130)
            histone H3 [Arabidopsis thaliana] >gi|387567|gb|AAA32809.1|
            (M17131) histone H3 [Arabidopsis thaliana]
            >gi|886738|emb|CAA59111.1| (X84377) histone 3 [Zea mays]
            >gi|1040764|gb|AAA79889.1| (M35387) histone H3 [Arabidopsis
            thaliana] >gi|1314779|gb|AAB67837.1| (U54827) histone H3 homolog
            [Brassica napus] >gi|1531754|emb|CAA57811.1| (X82414) Histone H3
            [Asparagus officinalis] >gi|1667592|gb|AAB18816.1| (U77296) histone
            3 [Oryza sativa] >gi|3249101|gb|AAC24084.1| (AC003114) Match to
            histone H3 gene gb|M17131 and gb|M35387 from A. thaliana.  ESTs
            gb|H76511 gb|H76255, gb|AA712452, gb|N65260 and gb|T42306 come from
            this gene. [Arabidopsis thaliana] >gi|5295939|dbj|BAA81840.1|
            (AB026295) ESTs C74053(E30274),D15300(C0425),AU030134(E50667)
            correspond to a region of the predicted gene.; Similar to Asparagus
            officinalis mRNA for Histone H3.(X82414) [Oryza sativa]
            >gi|5295940|dbj|BAA81841.1| (AB026295) ESTs
            C74053(E30274),D15300(C0425),AU030134(E50667) correspond to a
            region of the predicted gene.; Similar to Asparagus officinalis
            mRNA for Histone H3.(X82414) [Oryza sativa]
            >gi|7595794|gb|AAF64452.1|AF239930_1 (AF239930) histone H3
            [Euphorbia esula] >gi|7671463|emb|CAB89403.1| (AL353995) histone
            H3-like protein [Arabidopsis thaliana] >gi|7671464|emb|CAB89404.1|
            (AL353995) histone H3-like protein [Arabidopsis thaliana]
            >gi|7939509|dbj|BAA95712.1| (AB024028) histone H3-like protein
            [Arabidopsis thaliana] >gi|9759616|dbj|BAB11558.1| (AB011479)
            histone H3 [Arabidopsis thaliana] >gi|225459|prf||1303352A histone
            H3 [Helicoverpa zea] >gi|225839|prf||1314298B histone H3
            [Arabidopsis thaliana]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 670 (235.9 bits), Expect = 7.5e-65, P = 7.5e-65
 Identities = 135/136 (99%), Positives = 136/136 (100%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|166384|gb|AAA32655.1|  (M35867) histone H3 (H3-1.1) [Medicago sativa]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 669 (235.5 bits), Expect = 9.6e-65, P = 9.6e-65
 Identities = 135/136 (99%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSS VSALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSVVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|70753|pir||HSPM3  histone H3 - garden pea (tentative sequence)
            >gi|82610|pir||S00373 histone H3 - wheat
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:          ____                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    14..20
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 668 (235.1 bits), Expect = 1.2e-64, P = 1.2e-64
 Identities = 135/135 (100%), Positives = 135/135 (100%), Frame = +3

Query:    69 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 248
             ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL
Sbjct:     1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 60

Query:   249 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 428
             LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM
Sbjct:    61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 120

Query:   429 PKDIQLARRIRGERA 473
             PKDIQLARRIRGERA
Sbjct:   121 PKDIQLARRIRGERA 135


 >gi|1362108|pir||S56707  histone H3 homolog - common tobacco
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 665 (234.1 bits), Expect = 2.5e-64, P = 2.5e-64
 Identities = 134/136 (98%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQL RRIRGERA
Sbjct:   121 MPKDIQLPRRIRGERA 136


 >gi|122083|sp|P08903|H3_ENCAL  HISTONE H3 >gi|70751|pir||HSEAH3 histone H3 -
            Altenstein's bread tree >gi|224865|prf||1202289A histone H3
            [Encephalartos sp.]
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   Entrez               methylation site                         4
   Entrez               methylation site                         9
   Entrez               methylation site                         27
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    14..20
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 662 (233.0 bits), Expect = 5.3e-64, P = 5.3e-64
 Identities = 133/135 (98%), Positives = 135/135 (100%), Frame = +3

Query:    69 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 248
             ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIR+YQKSTEL
Sbjct:     1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRRYQKSTEL 60

Query:   249 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 428
             LIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIHAKRVTIM
Sbjct:    61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 120

Query:   429 PKDIQLARRIRGERA 473
             PKDIQLARRIRGERA
Sbjct:   121 PKDIQLARRIRGERA 135


 >gi|122070|sp|P08860|H32_ORYSA  HISTONE H3 >gi|82483|pir||A25564 histone H3 -
            rice >gi|169793|gb|AAA33907.1| (M15664) histone 3 [Oryza sativa]
            >gi|940018|gb|AAA74190.1| (U25664) histone H3 [Oryza sativa]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 660 (232.3 bits), Expect = 8.6e-64, P = 8.6e-64
 Identities = 133/136 (97%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQ+SAV ALQEAAE YLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQTSAVRALQEAAERYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|7305139  ref|NP_038576.1| histone gene complex 1 [Mus musculus]
            >gi|122068|sp|P16105|H32_BOVIN HISTONE H3 (H3.2)
            >gi|86308|pir||JS0690 histones H3.II and H3.III - chicken
            >gi|102611|pir||S11315 histone H3 - polychaete (Platynereis
            dumerilii) >gi|103050|pir||S09655 histone H3 - fruit fly
            (Drosophila hydei) >gi|109978|pir||JH0304 histone H3.2 - mouse
            >gi|1078925|pir||A56618 histone H3 - spoonworm (Urechis caupo)
            >gi|1085856|pir||A56654 histone H3 - Tigriopus californicus
            >gi|2119005|pir||A56580 histone H3 - midge (Chironomus thummi
            thummi) >gi|2119019|pir||I50460 H3 histone - muscovy duck
            >gi|2119020|pir||I51448 histone H3 - African clawed frog
            >gi|2119021|pir||I49397 histone H3.2 protein - shrew mouse
            >gi|2144743|pir||HSCH3 histone H3 - chicken >gi|7767078|pdb|1EQZ|G
            Chain G, X-Ray Structure Of The Nucleosome Core Particle At 2.5 A
            Resolution >gi|7767074|pdb|1EQZ|C Chain C, X-Ray Structure Of The
            Nucleosome Core Particle At 2.5 A Resolution >gi|6980691|pdb|2HIO|C
            Chain C, Histone Octamer (Chicken), Chromosomal Protein
            >gi|7083|emb|CAA39771.1| (X56335) histone H3 [Chironomus thummi]
            >gi|7433|emb|CAA36805.1| (X52576) histone H3 [Drosophila hydei]
            >gi|7439|emb|CAA34919.1| (X17072) histone H3 [Drosophila hydei]
            >gi|9821|emb|CAA37417.1| (X53330) H3 protein (AA 1 - 136)
            [Platynereis dumerilii] >gi|10615|emb|CAA36638.1| (X52393) histone
            H3 [Tigriopus californicus] >gi|10863|emb|CAA41696.1| (X58895) H3
            histone [Urechis caupo] >gi|51319|emb|CAA25840.1| (X01685) histone
            H3 (H3.2) (aa 1-136) [Mus musculus] >gi|62734|emb|CAA32855.1|
            (X14732) H3 histone (AA 1-136) [Cairina moschata]
            >gi|62735|emb|CAA32856.1| (X14732) H3 histone (AA 1-136) [Cairina
            moschata] >gi|63474|emb|CAA26138.1| (X02218) H3 (aa 1-136) [Gallus
            gallus] >gi|63482|emb|CAA44180.1| (X62291) histone H3-IV [Gallus
            gallus] >gi|63484|emb|CAA44181.1| (X62292) histone H3-V [Gallus
            gallus] >gi|64326|emb|CAA25529.1| (X01064) histone H3 [Oncorhynchus
            mykiss] >gi|64772|emb|CAA26813.1| (X03017) H3 (aa 1-136) [Xenopus
            laevis] >gi|64778|emb|CAA26818.1| (X03018) histone H3 (aa 1-136)
            [Xenopus laevis] >gi|64781|emb|CAA26890.1| (X03104) H3 (aa 1-135)
            [Xenopus laevis] >gi|161895|gb|AAC41552.1| (M84797) histone H3
            [Tigriopus californicus] >gi|211857|gb|AAA48796.1| (M61154) histone
            H3 [Gallus gallus] >gi|214279|gb|AAA49765.1| (M21286) histone H3
            [Xenopus laevis] >gi|297563|emb|CAA51324.1| (X72803) histone H3
            [Chironomus thummi] >gi|387183|gb|AAA37764.1| (M33989) histone H3.2
            [Mus musculus] >gi|387195|gb|AAA37810.1| (M32459) histone H3 [Mus
            musculus] >gi|387197|gb|AAA37812.1| (M32461) histone H3 [Mus
            musculus] >gi|455387|gb|AAA49770.1| (M21287) histone H3 [Xenopus
            laevis] >gi|515836|emb|CAA56577.1| (X80328) histone H3 protein [Mus
            musculus] >gi|516331|emb|CAA56573.1| (X80326) histone H3.2 protein
            [Mus pahari] >gi|1458128|gb|AAB04760.1| (U62669) histone H3.2-F
            [Mus musculus] >gi|1458134|gb|AAB04764.1| (U62671) histone H3.2-B
            [Mus musculus] >gi|1458144|gb|AAB04771.1| (U62674) histone H3.2-615
            [Mus musculus] >gi|1458146|gb|AAB04772.1| (U62675) histone H3.2-616
            [Mus musculus] >gi|1493815|gb|AAC60003.1| (U37577) histone H3-VI
            [Gallus gallus] >gi|1493817|gb|AAC60004.1| (U37578) histone H3-VII
            [Gallus gallus] >gi|1493819|gb|AAC60005.1| (U37579) histone H3-VIII
            [Gallus gallus] >gi|2564107|gb|AAC15916.1| (AF007904) histone H3
            [Chaetopterus variopedatus] >gi|7415970|dbj|BAA93621.1| (AB019400)
            histone H3 [Drosophila melanogaster] >gi|7415972|dbj|BAA93622.1|
            (AB019401) histone H3 [Drosophila simulans]
            >gi|7415974|dbj|BAA93623.1| (AB019402) histone H3 [Drosophila
            sechellia] >gi|7415976|dbj|BAA93624.1| (AB019403) histone H3
            [Drosophila mauritiana] >gi|7415978|dbj|BAA93625.1| (AB019404)
            histone H3 [Drosophila teissieri] >gi|7415980|dbj|BAA93626.1|
            (AB019405) histone H3 [Drosophila yakuba]
            >gi|7415984|dbj|BAA93628.1| (AB019407) histone H3 [Drosophila
            orena]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 659 (232.0 bits), Expect = 1.1e-63, P = 1.1e-63
 Identities = 132/136 (97%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|103198|pir||S10097  histone H3 - fruit fly (Drosophila melanogaster)
            >gi|8070|emb|CAA32434.1| (X14215) H3 histone [Drosophila
            melanogaster]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 658 (231.6 bits), Expect = 1.4e-63, P = 1.4e-63
 Identities = 131/136 (96%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKR+TI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRITI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|4504281  ref|NP_003520.1| H3 histone family, member A [Homo sapiens]
            >gi|4504285 ref|NP_003522.1| H3 histone family, member C [Homo
            sapiens] >gi|4504287 ref|NP_003523.1| H3 histone family, member D
            [Homo sapiens] >gi|4504289 ref|NP_003524.1| H3 histone family,
            member F [Homo sapiens] >gi|4504291 ref|NP_003525.1| H3 histone
            family, member H [Homo sapiens] >gi|4504293 ref|NP_003526.1| H3
            histone family, member J [Homo sapiens] >gi|4504295
            ref|NP_003527.1| H3 histone family, member K [Homo sapiens]
            >gi|4504297 ref|NP_003528.1| H3 histone family, member L [Homo
            sapiens] >gi|10440560 ref|NP_066298.1| H3 histone family, member I
            [Homo sapiens] >gi|11418821 ref|XP_004410.1| H3 histone family,
            member L [Homo sapiens] >gi|11418839 ref|XP_004419.1| H3 histone
            family, member B [Homo sapiens] >gi|11418853 ref|XP_004426.1| H3
            histone family, member I [Homo sapiens] >gi|11526422
            ref|XP_004451.1| H3 histone family, member J [Homo sapiens]
            >gi|11526432 ref|XP_004456.1| H3 histone family, member K [Homo
            sapiens] >gi|12732477 ref|XP_011478.1| H3 histone family, member A
            [Homo sapiens] >gi|12732479 ref|XP_011480.1| H3 histone family,
            member C [Homo sapiens] >gi|12732491 ref|XP_011485.1| H3 histone
            family, member D [Homo sapiens] >gi|12732501 ref|XP_011487.1| H3
            histone family, member H [Homo sapiens] >gi|12732542
            ref|XP_011498.1| H3 histone family, member F [Homo sapiens]
            >gi|122064|sp|P16106|H31_HUMAN HISTONE H3.1 >gi|90623|pir||S06755
            histone H3.1 - mouse >gi|1070597|pir||HSHU3 histone H3.1 - human
            >gi|2119009|pir||I57019 H3 histone - rat >gi|2119010|pir||I49398
            histone H3.1 protein - shrew mouse >gi|31982|emb|CAA40407.1|
            (X57128) histone H3 [Homo sapiens] >gi|32115|emb|CAA24952.1|
            (X00090) histone H3 [Homo sapiens] >gi|51317|emb|CAA25839.1|
            (X01684) histone H3 (H3.1) (aa 1-136) [Mus musculus]
            >gi|51327|emb|CAA34512.1| (X16496) H3.1 histone (AA 1-136) [Mus
            musculus] >gi|184070|gb|AAA63185.1| (M60746) histone H3.1 [Homo
            sapiens] >gi|310133|gb|AAA19824.1| (L19706) H3 histone [Rattus
            norvegicus] >gi|387196|gb|AAA37811.1| (M32460) histone H3 [Mus
            musculus] >gi|387198|gb|AAA37813.1| (M32462) histone H3 [Mus
            musculus] >gi|515008|emb|CAA56572.1| (X80325) histone 3.1 protein
            [Mus pahari] >gi|516241|emb|CAA56571.1| (X80324) histone H3.1
            protein [Mus pahari] >gi|559902|emb|CAA86403.1| (Z46261) histone
            H3a [Homo sapiens] >gi|1458132|gb|AAB04763.1| (U62670) histone
            H3.1-I [Mus musculus] >gi|1458136|gb|AAB04765.1| (U62672) histone
            H3.1-D [Mus musculus] >gi|1568561|emb|CAB02547.1| (Z80785) histone
            H3 [Homo sapiens] >gi|1568563|emb|CAB02548.1| (Z80786) histone H3
            [Homo sapiens] >gi|1749796|emb|CAB06030.1| (Z83735) histone H3
            [Homo sapiens] >gi|1749800|emb|CAB06032.1| (Z83737) histone H3
            [Homo sapiens] >gi|1894787|emb|CAA58540.1| (X83550) histone H3
            [Homo sapiens] >gi|2292937|emb|CAA72968.1| (Y12290) Histone H3 [Mus
            musculus] >gi|3080464|emb|CAB11424.1| (Z98744) histone H3 [Homo
            sapiens] >gi|3219592|emb|CAA15670.1| (AL009179) dJ97D16.6 (Histone
            H3.1) [Homo sapiens] >gi|10198611|emb|CAC03412.1| (AL031777)
            dJ34B20.3 (H3 Histone family, member H (H3/h, H3.1)) [Homo sapiens]
            >gi|10198612|emb|CAC03413.1| (AL031777) J34B20.18 (H3 Histone
            family, member I (H3/i)) [Homo sapiens]
            >gi|10198614|emb|CAC03416.1| (AL031777) dJ34B20.9 (Histone H3.1)
            [Homo sapiens] >gi|10198618|emb|CAC03421.1| (AL031777) dJ34B20.17
            (novel H3 Histone family protein) [Homo sapiens]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 658 (231.6 bits), Expect = 1.4e-63, P = 1.4e-63
 Identities = 132/136 (97%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|9506767  ref|NP_062342.1| H3 histone, family 2 [Mus musculus]
            >gi|90622|pir||S06743 histone H3 - mouse >gi|51301|emb|CAA34274.1|
            (X16148) H3 protein (AA 1-136) [Mus musculus]
            >gi|211859|gb|AAA48797.1| (M61155) histone H3 [Gallus gallus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 656 (230.9 bits), Expect = 2.3e-63, P = 2.3e-63
 Identities = 131/136 (96%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCA+HAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAMHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|484441|pir||JN0687  histone H3 - sea squirt (Styela plicata)
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 656 (230.9 bits), Expect = 2.3e-63, P = 2.3e-63
 Identities = 131/136 (96%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSS+V ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSSVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|122088|sp|P02298|H3_PSAMI  HISTONE H3, EMBRYONIC >gi|85313|pir||S01198
            histone H3 - starfish (Dermasterias imbricata)
            >gi|85320|pir||S01196 histone H3 - starfish (Pisaster brevispinus)
            >gi|85324|pir||S01197 histone H3 - starfish (Pisaster ochraceus)
            >gi|103583|pir||S20678 histone H3 - starfish (Solaster stimpsoni)
            >gi|103606|pir||S20669 histone H3 - starfish (Pycnopodia
            helianthoides) >gi|7468|emb|CAA30388.1| (X07505) histone H3 (AA
            1-36) [Dermasterias imbricata] >gi|9613|emb|CAA25242.1| (X00593) H3
            [Lytechinus pictus] >gi|9615|emb|CAA25262.1| (X00628) H3 protein
            [Lytechinus pictus] >gi|9790|emb|CAA38050.1| (X54112) H3 histone
            [Pisaster brevispinus] >gi|9792|emb|CAA30387.1| (X07504) histone H3
            (AA 1-36) [Pisaster brevispinus] >gi|9991|emb|CAA38054.1| (X54114)
            histone H3 [Pycnopodia helianthoides] >gi|10021|emb|CAA24375.1|
            (V01143) reading frame for H3 [Psammechinus miliaris]
            >gi|10035|emb|CAA25632.1| (X01345) histone H3 (aa 1-135)
            [Psammechinus miliaris] >gi|10046|emb|CAA38052.1| (X54113) histone
            H3 [Pisaster ochraceus] >gi|10048|emb|CAA30386.1| (X07503) histone
            H3 (AA 1-36) [Pisaster ochraceus] >gi|10340|emb|CAA38056.1|
            (X54115) histone H3 [Solaster stimpsoni] >gi|159965|gb|AAA29441.1|
            (M36920) histone H3 [Paracentrotus lividus]
            >gi|159970|gb|AAA65843.1| (M25281) histone H3 [Paracentrotus
            lividus] >gi|161387|gb|AAA30026.1| (M10645) histone H3
            [Psammechinus miliaris] >gi|161401|gb|AAB59206.1| (J01184) histone
            H3 [Psammechinus miliaris] >gi|161481|gb|AAA30053.1| (M36921)
            histone H3 [Strongylocentrotus droebachiensis]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 655 (230.6 bits), Expect = 2.9e-63, P = 2.9e-63
 Identities = 131/136 (96%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKT+LRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|417103|sp|P11105|H32_MEDSA  HISTONE H3.2, MINOR >gi|282871|pir||S24346
            histon H3 protein [similarity] - Arabidopsis thaliana
            >gi|16324|emb|CAA42957.1| (X60429) histone H3.3 like protein
            [Arabidopsis thaliana] >gi|404825|emb|CAA42958.1| (X60429) histone
            H3.3 like protein [Arabidopsis thaliana] >gi|488563|gb|AAB49538.1|
            (U09458) histone H3.2 [Medicago sativa] >gi|488567|gb|AAB36493.1|
            (U09460) histone H3.2 [Medicago sativa] >gi|488569|gb|AAB36494.1|
            (U09461) histone H3.2 [Medicago sativa] >gi|488575|gb|AAB36497.1|
            (U09464) histone H3.2 [Medicago sativa] >gi|488577|gb|AAB36498.1|
            (U09465) histone H3.2 [Medicago sativa] >gi|510911|emb|CAA56153.1|
            (X79714) histone H3 [Lolium temulentum] >gi|1435157|emb|CAA58445.1|
            (X83422) histone H3 variant H3.3 [Lycopersicon esculentum]
            >gi|2558944|gb|AAB97162.1| (AF024716) histone 3 [Gossypium
            hirsutum] >gi|3273350|dbj|BAA31218.1| (AB015760) histone H3
            [Nicotiana tabacum] >gi|3885890|gb|AAC78105.1| (AF093633) histone
            H3 [Oryza sativa] >gi|4038469|gb|AAC97380.1| (AF109910) histone H3
            [Porteresia coarctata] >gi|4490754|emb|CAB38916.1| (AL035708)
            histone H3.3 [Arabidopsis thaliana] >gi|4490755|emb|CAB38917.1|
            (AL035708) Histon H3 [Arabidopsis thaliana]
            >gi|6006364|dbj|BAA84794.1| (AP000559) EST D15300(C0425)
            corresponds to a region of the predicted gene.; Similar to histone
            H3 (AB015760) [Oryza sativa] >gi|7271058|emb|CAB80666.1| (AL161596)
            histone H3.3 [Arabidopsis thaliana] >gi|7271059|emb|CAB80667.1|
            (AL161596) Histon H3 [Arabidopsis thaliana]
            >gi|8979732|emb|CAB96853.1| (AL365234) histon H3 protein
            [Arabidopsis thaliana]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   Entrez               methylation site                         5
   Entrez               methylation site                         10
   Entrez               acetylation site                         15
   Entrez               methylation site                         15
   Entrez               acetylation site                         19
   Entrez               methylation site                         19
   Entrez               acetylation site                         24
   Entrez               methylation site                         24
   Entrez               methylation site                         28
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 655 (230.6 bits), Expect = 2.9e-63, P = 2.9e-63
 Identities = 132/136 (97%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|422606|pir||S32638  histone H3.l - African clawed frog
            >gi|288992|emb|CAA51455.1| (X72950) histone H3 [Xenopus laevis]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 655 (230.6 bits), Expect = 2.9e-63, P = 2.9e-63
 Identities = 131/136 (96%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLC IHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCGIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|2119011|pir||I48092  histone H3.2 - long-tailed hamster
            >gi|516304|emb|CAA56580.1| (X80330) histone H3.2 [Cricetulus
            longicaudatus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___     _____________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   DOMO                 DM01061: HISTONEH3                       38..136
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 655 (230.6 bits), Expect = 2.9e-63, P = 2.9e-63
 Identities = 131/136 (96%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTV LREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVTLREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|7415982|dbj|BAA93627.1|  (AB019406) histone H3 [Drosophila erecta]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 655 (230.6 bits), Expect = 2.9e-63, P = 2.9e-63
 Identities = 131/136 (96%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQT RKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTTRKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|70743|pir||HSRK3  histone H3 - striped catshark >gi|70744|pir||HSTR3 histone
            H3, gonadal - rainbow trout >gi|70745|pir||HSFI3 histone H3 -
            smallmouth buffalo fish >gi|70746|pir||HSXL31 histone H3.1 -
            African clawed frog >gi|223453|prf||0806228A histone H3 [Gallus
            gallus] >gi|350633|prf||0710252A histone H3 [Homo sapiens]
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:        _ ____ _  _           ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   Entrez               modified site: N6-methyllysine or N6,N6- 9
   Entrez               modified site: N6-methyllysine or N6,N6- 27
   Entrez               modified site: N6-methyllysine or N6,N6- 36
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    14..20
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 654 (230.2 bits), Expect = 3.7e-63, P = 3.7e-63
 Identities = 131/135 (97%), Positives = 134/135 (99%), Frame = +3

Query:    69 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 248
             ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTEL
Sbjct:     1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60

Query:   249 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 428
             LIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIM
Sbjct:    61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120

Query:   429 PKDIQLARRIRGERA 473
             PKDIQLARRIRGERA
Sbjct:   121 PKDIQLARRIRGERA 135


 >gi|12729013  ref|XP_010903.1| similar to H3 histone, family 3A (H. sapiens)
            [Homo sapiens]
            Length = 141

Frame  3 hits (HSPs):    _________________________________________________
                        __________________________________________________
Database sequence:     |                 |                 |              | 141
                       0                50               100

  Plus Strand HSPs:

 Score = 654 (230.2 bits), Expect = 3.7e-63, P = 3.7e-63
 Identities = 129/137 (94%), Positives = 136/137 (99%), Frame = +3

Query:    63 SMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST 242
             +MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKST
Sbjct:     5 TMARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKST 64

Query:   243 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVT 422
             ELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVT
Sbjct:    65 ELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVT 124

Query:   423 IMPKDIQLARRIRGERA 473
             IMPKDIQLARRIRGERA
Sbjct:   125 IMPKDIQLARRIRGERA 141


 >gi|4504279  ref|NP_002098.1| H3 histone, family 3A [Homo sapiens] >gi|4885385
            ref|NP_005315.1| H3 histone, family 3B (H3.3B) [Homo sapiens]
            >gi|6680159 ref|NP_032236.1| H3 histone, family 3A [Mus musculus]
            >gi|6680161 ref|NP_032237.1| H3 histone, family 3B [Mus musculus]
            >gi|11424236 ref|XP_008132.1| H3 histone, family 3B (H3.3B) [Homo
            sapiens] >gi|122075|sp|P06351|H33_HUMAN HISTONE H3.3 (H3.B) (H3.3Q)
            >gi|90043|pir||S10168 histone H3.3A - rabbit >gi|90624|pir||S04186
            histone H3.3 - mouse >gi|423678|pir||S34185 histone H3 - rat
            >gi|476852|pir||A45941 histone H3 - Atlantic surf clam
            >gi|1070596|pir||HSHU33 histone H3.3 - human
            >gi|2119006|pir||S61220 histone H3.3 - fruit fly (Drosophila
            melanogaster) >gi|2119007|pir||S61215 histone H3.3 - fruit fly
            (Drosophila melanogaster) >gi|2119008|pir||S20109 histone H3.3Q -
            fruit fly (Drosophila melanogaster) >gi|2119022|pir||I50245 histone
            H3.3B - chicken >gi|2119023|pir||S61218 histone H3.3 - fruit fly
            (Drosophila hydei) >gi|2119024|pir||S61214 histone H3.3 - fruit fly
            (Drosophila hydei) >gi|1568|emb|CAA36179.1| (X51897) H3.3A histone
            (AA 1-136) [Oryctolagus cuniculus] >gi|8046|emb|CAA37819.1|
            (X53822) Histone H3.3Q [Drosophila melanogaster]
            >gi|51198|emb|CAA31940.1| (X13605) Histone H3.3 (AA 1 - 136) [Mus
            musculus] >gi|63480|emb|CAA68458.1| (Y00392) histone H3.3B (AA 1 -
            136) [Gallus gallus] >gi|161190|gb|AAA29965.1| (M17876) histone H3
            [Spisula solidissima] >gi|211853|gb|AAA48794.1| (M11393) histone
            3.3 [Gallus gallus] >gi|306848|gb|AAA52653.1| (M11354) H3.3 histone
            [Homo sapiens] >gi|306849|gb|AAA52654.1| (M11353) H3.3 histone
            [Homo sapiens] >gi|313319|emb|CAA52035.1| (X73683) histon H3
            [Rattus norvegicus] >gi|761716|emb|CAA88778.1| (Z48950) histone
            H3.3 [Homo sapiens] >gi|963024|emb|CAA57078.1| (X81206) histone
            H3.3 [Drosophila hydei] >gi|963026|emb|CAA57081.1| (X81208) histone
            H3.3 [Drosophila hydei] >gi|963029|emb|CAA57080.1| (X81207) histone
            H3.3 [Drosophila melanogaster] >gi|963031|emb|CAA57077.1| (X81205)
            histone H3.3 [Drosophila melanogaster] >gi|1006654|emb|CAA57712.1|
            (X82257) histone H3.3A variant [Drosophila melanogaster]
            >gi|1838986|emb|CAB06625.1| (Z85979) histone H3.3A [Mus musculus]
            >gi|7291014|gb|AAF46452.1| (AE003446) His3.3B gene product
            [Drosophila melanogaster] >gi|7296940|gb|AAF52213.1| (AE003608)
            His3.3A gene product [Drosophila melanogaster]
            >gi|10441988|gb|AAG17271.1|AF218029_1 (AF218029) unknown [Homo
            sapiens] >gi|12654577|gb|AAH01124.1|AAH01124 (BC001124) H3 histone,
            family 3A [Homo sapiens]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 653 (229.9 bits), Expect = 4.8e-63, P = 4.8e-63
 Identities = 129/136 (94%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|70749|pir||HSBO3  histone H3 - bovine >gi|3080462|emb|CAB11422.1| (Z98744)
            histone H3.1 [Homo sapiens] >gi|229423|prf||721930A histone H3 [Bos
            taurus]
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _ _ ______              ____                   __ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   Entrez               binding site: phosphate (Arg) (covalent) 2
   Entrez               binding site: phosphate (Arg) (covalent) 128
   Entrez               binding site: phosphate (Arg) (covalent) 129
   Entrez               binding site: phosphate (Arg) (covalent) 131
   Entrez               modified site: N6-methyllysine, N6,N6-di 9
   Entrez               modified site: N6-methyllysine, N6,N6-di 27
   Entrez               binding site: acetyl (Lys) (covalent) (p 14
   Entrez               binding site: acetyl (Lys) (covalent) (p 23
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    14..20
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 653 (229.9 bits), Expect = 4.8e-63, P = 4.8e-63
 Identities = 131/135 (97%), Positives = 133/135 (98%), Frame = +3

Query:    69 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 248
             ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTEL
Sbjct:     1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60

Query:   249 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 428
             LIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA EAYLVGLFEDTNLCAIHAKRVTIM
Sbjct:    61 LIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIM 120

Query:   429 PKDIQLARRIRGERA 473
             PKDIQLARRIRGERA
Sbjct:   121 PKDIQLARRIRGERA 135


 >gi|211855|gb|AAA48795.1|  (J00869) histone H3 [Gallus gallus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 653 (229.9 bits), Expect = 4.8e-63, P = 4.8e-63
 Identities = 131/136 (96%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIA DFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAXDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|122079|sp|P22843|H3_ACRFO  HISTONE H3 >gi|84397|pir||JQ0757 histone H3 -
            staghorn coral >gi|155640|gb|AAA64958.1| (M60509) H3 [Acropora
            muricata] >gi|166308|gb|AAC37352.1| (L11067) histone H3 [Acropora
            muricata] >gi|455649|gb|AAB28736.1| (S67324) histone H3, H3
            [Acropora formosa=coral, sperms, Peptide, 136 aa] [Acropora
            muricata] >gi|450044|prf||1920342A histone H3 [Acropora formosa]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 652 (229.5 bits), Expect = 6.1e-63, P = 6.1e-63
 Identities = 131/136 (96%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAA KSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAAAKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|122082|sp|P02299|H3_DROME  HISTONE H3
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 652 (229.5 bits), Expect = 6.1e-63, P = 6.1e-63
 Identities = 130/136 (95%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLV LFEDTNLCAIHAKR+TI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRITI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|1708108|sp|Q10453|H33_CAEEL  HISTONE H3.3 >gi|7439813|pir||T16361
            hypothetical protein F45E1.6 - Caenorhabditis elegans
            >gi|860702|gb|AAB04902.1| (U28732) similar to histone H3
            [Caenorhabditis elegans]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 652 (229.5 bits), Expect = 6.1e-63, P = 6.1e-63
 Identities = 129/136 (94%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|2119013|pir||I49395  histone H3.2 protein - shrew mouse
            >gi|515005|emb|CAA56575.1| (X80327) histone H3.2 protein [Mus
            pahari]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 651 (229.2 bits), Expect = 7.8e-63, P = 7.8e-63
 Identities = 130/136 (95%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQL RRIRGERA
Sbjct:   121 MPKDIQLVRRIRGERA 136


 >gi|2116601|dbj|BAA20144.1|  (AB003784) Histone H3 [Drosophila simulans]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 651 (229.2 bits), Expect = 7.8e-63, P = 7.8e-63
 Identities = 130/136 (95%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKS PATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSVPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+E YLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASETYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|2144744|pir||HSKW3  histone H3 - Caenorhabditis elegans
            >gi|6752|emb|CAA33644.1| (X15634) Histone protein [Caenorhabditis
            elegans] >gi|1326373|gb|AAB00650.1| (U58750) Similar to Histone
            [Caenorhabditis elegans] >gi|1458312|gb|AAC48033.1| (U64845)
            Similar to histone H3 [Caenorhabditis elegans]
            >gi|2935373|gb|AAC05102.1| (AF047656) C. elegans histone H3
            (SP:P08898) [Caenorhabditis elegans] >gi|3873702|emb|CAA97411.1|
            (Z73102) predicted using Genefinder~Similarity to C.elegans histone
            H3 (SW:H3_CAEEL), contains similarity to Pfam domain: PF00125 (Core
            histone H2A/H2B/H3/H4), Score=113.3, E-value=1.5e-30, N=1
            [Caenorhabditis elegans] >gi|3875619|emb|CAB04057.1| (Z81495)
            predicted using Genefinder~contains similarity to Pfam domain:
            PF00125 (Core histone H2A/H2B/H3/H4), Score=113.3, E-value=1.5e-30,
            N=1 [Caenorhabditis elegans] >gi|3876195|emb|CAA92733.1| (Z68336)
            predicted using Genefinder~contains similarity to Pfam domain:
            PF00125 (Core histone H2A/H2B/H3/H4), Score=113.3, E-value=1.5e-30,
            N=1 [Caenorhabditis elegans] >gi|3877574|emb|CAB05209.1| (Z82271)
            predicted using Genefinder~Similarity to Human histone H3
            (SW:P16106), contains similarity to Pfam domain: PF00125 (Core
            histone H2A/H2B/H3/H4), Score=113.3, E-value=1.5e-30, N=1
            [Caenorhabditis elegans] >gi|3879732|emb|CAB07653.1| (Z93388)
            predicted using Genefinder~contains similarity to Pfam domain:
            PF00125 (Core histone H2A/H2B/H3/H4), Score=113.3, E-value=1.5e-30,
            N=1~cDNA EST yk89h9.5 comes from this gene~cDNA EST yk112f6.5 comes
            from this gene~cDNA EST yk63d8.5 comes from >
            >gi|3881582|emb|CAB05831.1| (Z83245) predicted using
            Genefinder~contains similarity to Pfam domain: PF00125 (Core
            histone H2A/H2B/H3/H4), Score=113.3, E-value=1.5e-30, N=1
            [Caenorhabditis elegans] >gi|3881584|emb|CAB05833.1| (Z83245)
            predicted using Genefinder~contains similarity to Pfam domain:
            PF00125 (Core histone H2A/H2B/H3/H4), Score=113.3, E-value=1.5e-30,
            N=1 [Caenorhabditis elegans] >gi|3881585|emb|CAB05834.1| (Z83245)
            predicted using Genefinder~contains similarity to Pfam domain:
            PF00125 (Core histone H2A/H2B/H3/H4), Score=113.3, E-value=1.5e-30,
            N=1~cDNA EST yk213a4.3 comes from this gene~cDNA EST yk413g10.5
            comes from this gene [Caenorhabditis elegans]
            >gi|9755513|gb|AAF98226.1| (U64843) histone H3 [Caenorhabditis
            elegans] >gi|9755518|gb|AAF98231.1| (U64843) histone H3
            [Caenorhabditis elegans] >gi|12276045|gb|AAG50235.1|AF304122_1
            (AF304122) histone H3 [Caenorhabditis elegans]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:       _ _ _____   _          ____ _                    
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   Entrez               binding site: acetyl (Lys) (covalent) (p 5
   Entrez               binding site: acetyl (Lys) (covalent) (p 15
   Entrez               binding site: acetyl (Lys) (covalent) (p 24
   Entrez               modified site: N6-methyllysine or N6,N6- 10
   Entrez               modified site: N6-methyllysine (Lys) (pa 28
   Entrez               modified site: N6-methyllysine (Lys) (pa 37
   Entrez               modified site: N6-methyllysine (Lys) (pa 80
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 650 (228.8 bits), Expect = 9.9e-63, P = 9.9e-63
 Identities = 130/136 (95%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPA+GGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIR+ PFQRLVREIAQDFKTDLRFQSSAV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|70747|pir||HSUR3M  histone H3, embryonic - sea urchin (Psammechinus
            miliaris)
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:          ____                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    14..20
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 650 (228.8 bits), Expect = 9.9e-63, P = 9.9e-63
 Identities = 130/135 (96%), Positives = 134/135 (99%), Frame = +3

Query:    69 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 248
             ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTEL
Sbjct:     1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60

Query:   249 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 428
             LIRKLPFQRLVREIAQDFKT+LRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIM
Sbjct:    61 LIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIM 120

Query:   429 PKDIQLARRIRGERA 473
             PKDIQLARRIRGERA
Sbjct:   121 PKDIQLARRIRGERA 135


 >gi|161319|gb|AAA30003.1|  (J01175) histone H3 [Lytechinus pictus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 649 (228.5 bits), Expect = 1.3e-62, P = 1.3e-62
 Identities = 130/136 (95%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             L IRKLPFQRLVREIAQDFKT+LRFQSSAV ALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LFIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEAREAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|386772|gb|AAA52651.1|  (M26150) histone H3 [Homo sapiens]
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100

  Plus Strand HSPs:

 Score = 649 (228.5 bits), Expect = 1.3e-62, P = 1.3e-62
 Identities = 130/134 (97%), Positives = 132/134 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGE 467
             MPKDIQLARRIRGE
Sbjct:   121 MPKDIQLARRIRGE 134


 >gi|1079199|pir||S50140  histone H3.3 - sea urchin (Paracentrotus lividus)
            >gi|557666|emb|CAA53692.1| (X76081) H3.3 histone [Paracentrotus
            lividus] >gi|1091581|prf||2021267A histone H3.3 [Paracentrotus
            lividus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 649 (228.5 bits), Expect = 1.3e-62, P = 1.3e-62
 Identities = 128/136 (94%), Positives = 135/136 (99%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKT+LRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTELRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|4504283  ref|NP_003521.1| H3 histone family, member B [Homo sapiens]
            >gi|1568559|emb|CAB02546.1| (Z80784) histone H3 [Homo sapiens]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 649 (228.5 bits), Expect = 1.3e-62, P = 1.3e-62
 Identities = 131/136 (96%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA EA LVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEATLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|7510049|pir||T27037  hypothetical protein Y49E10.6 - Caenorhabditis elegans
            >gi|3979986|emb|CAB11546.1| (Z98866) predicted using
            Genefinder~contains similarity to Pfam domain: PF00125 (Core
            histone H2A/H2B/H3/H4), Score=111.9, E-value=3.9e-30, N=1~cDNA EST
            EMBL:T00023 comes from this gene; cDNA EST EMBL:T02166 comes from
            this gene~cDNA EST EMBL:T01640 co>
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 649 (228.5 bits), Expect = 1.3e-62, P = 1.3e-62
 Identities = 128/136 (94%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKD+QLARRIRGERA
Sbjct:   121 MPKDMQLARRIRGERA 136


 >gi|122089|sp|P06352|H3_STRPU  HISTONE H3, EMBRYONIC >gi|10258|emb|CAA27582.1|
            (X03952) histone H3 (aa 1-136) [Strongylocentrotus purpuratus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 647 (227.8 bits), Expect = 2.1e-62, P = 2.1e-62
 Identities = 130/136 (95%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKT+LRFQSSAV ALQEA+EAYLV LFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVRLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|2119012|pir||I50244  histone 3.3A - chicken >gi|211851|gb|AAA48793.1|
            (M11667) histone 3.3A [Gallus gallus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 647 (227.8 bits), Expect = 2.1e-62, P = 2.1e-62
 Identities = 128/136 (94%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARK TGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKFTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|7522681|gb|AAB27669.2|  (S64499) H3 histone [Styela plicata]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 647 (227.8 bits), Expect = 2.1e-62, P = 2.1e-62
 Identities = 129/136 (94%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSS+V ALQEA+E YLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSSVMALQEASERYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQL RRIRGERA
Sbjct:   121 MPKDIQLGRRIRGERA 136


 >gi|6686276|sp|P08898|H3_CAEEL  HISTONE H3
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   Entrez               acetylation site                         5
   Entrez               acetylation site                         15
   Entrez               acetylation site                         24
   Entrez               methylation site                         10
   Entrez               methylation site                         28
   Entrez               methylation site                         37
   Entrez               methylation site                         80
   Entrez               methylation site: CARBOXY.               97
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 646 (227.4 bits), Expect = 2.6e-62, P = 2.6e-62
 Identities = 129/136 (94%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPA+GGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIR+ PFQRLVREIAQDFKTDLRFQSSAV ALQEA EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|9759615|dbj|BAB11557.1|  (AB011479) histone H3 [Arabidopsis thaliana]
            Length = 139

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                 |                 |              | 139
                       0                50               100

  Plus Strand HSPs:

 Score = 645 (227.1 bits), Expect = 3.4e-62, P = 3.4e-62
 Identities = 130/138 (94%), Positives = 135/138 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTAR STGGKAPRKQLA KAAR+SAPATGGVKKPHRFRPGTVALR+IRKYQKSTE
Sbjct:     1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             +LIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 ILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA*G 479
             MPK+IQLARRIRGERA G
Sbjct:   121 MPKEIQLARRIRGERARG 138


 >gi|11513397|pdb|1F66|A  Chain A, 2.6 A Crystal Structure Of A Nucleosome Core
            Particle Containing The Variant Histone H2a.Z
            >gi|11513401|pdb|1F66|E Chain E, 2.6 A Crystal Structure Of A
            Nucleosome Core Particle Containing The Variant Histone H2a.Z
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 645 (227.1 bits), Expect = 3.4e-62, P = 3.4e-62
 Identities = 130/136 (95%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATG VKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGEVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLV LFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|122090|sp|P08437|H3_VOLCA  HISTONE H3 >gi|81287|pir||S00940 histone H3 -
            Volvox carteri >gi|2119017|pir||S59581 histone H3 (clones CH-II and
            CH-III) - Chlamydomonas reinhardtii >gi|21985|emb|CAA30035.1|
            (X06963) put. histone H3 [Volvox carteri] >gi|21988|emb|CAA30037.1|
            (X06964) put. histone H3 [Volvox carteri] >gi|571470|gb|AAA98444.1|
            (U16724) histone H3 [Chlamydomonas reinhardtii]
            >gi|571475|gb|AAA98448.1| (U16725) histone H3 [Chlamydomonas
            reinhardtii]
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..133
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     32..53
   PRINTS               4: Histone H3 motif IV - 2      56..73
   PRINTS               5: Histone H3 motif V - 2       78..96
   PRINTS               6: Histone H3 motif VI - 2      96..112
   PRINTS               7: Histone H3 motif VII - 2     112..133
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..57
   PRODOM               PD000978: H3(15) H32(5) H33(4)           59..133
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 644 (226.7 bits), Expect = 4.3e-62, P = 4.3e-62
 Identities = 131/136 (96%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARK+ PATGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTE 59

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    60 LLIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 119

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   120 MPKDIQLARRIRGERA 135


 >gi|4504299  ref|NP_003484.1| H3 histone family, member T [Homo sapiens]
            >gi|11427884 ref|XP_002112.1| H3 histone family, member T [Homo
            sapiens] >gi|1362815|pir||S57473 histone H3 - human
            >gi|871260|emb|CAA90020.1| (Z49861) histone H3 [Homo sapiens]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 644 (226.7 bits), Expect = 4.3e-62, P = 4.3e-62
 Identities = 128/136 (94%), Positives = 132/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRL+REIAQDFKTDLRFQSSAV ALQEA E+YLVGLFEDTNLC IHAKRVTI
Sbjct:    61 LLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|85001|pir||JQ1343  histone H3.3 - fruit fly (Drosophila melanogaster)
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 643 (226.3 bits), Expect = 5.5e-62, P = 5.5e-62
 Identities = 127/136 (93%), Positives = 134/136 (98%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAAAKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             +PKDIQLARRIRGERA
Sbjct:   121 IPKDIQLARRIRGERA 136


 >gi|70748|pir||HSUR3P  histone H3, embryonic - sea urchin (Strongylocentrotus
            purpuratus)
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:          ____                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    14..20
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 642 (226.0 bits), Expect = 7.0e-62, P = 7.0e-62
 Identities = 129/135 (95%), Positives = 133/135 (98%), Frame = +3

Query:    69 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 248
             ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTEL
Sbjct:     1 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTEL 60

Query:   249 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 428
             LIRKLPFQRLVREIAQDFKT+LRFQSSAV ALQEA+EAYLV LFEDTNLCAIHAKRVTIM
Sbjct:    61 LIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVRLFEDTNLCAIHAKRVTIM 120

Query:   429 PKDIQLARRIRGERA 473
             PKDIQLARRIRGERA
Sbjct:   121 PKDIQLARRIRGERA 135


 >gi|159967|gb|AAA75395.1|  (M36919) histone H3 [Paracentrotus lividus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 641 (225.6 bits), Expect = 8.9e-62, P = 8.9e-62
 Identities = 129/136 (94%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKA RKQLATKAARKSAPATGGVKKPHR+RPGTVA REIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKASRKQLATKAARKSAPATGGVKKPHRYRPGTVASREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKT+LRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|2119018|pir||S59592  histone H3 (clone CH-I) - Chlamydomonas reinhardtii
            >gi|576633|gb|AAA98455.1| (U16825) histone H3 [Chlamydomonas
            reinhardtii]
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:           ___                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 641 (225.6 bits), Expect = 8.9e-62, P = 8.9e-62
 Identities = 130/136 (95%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARK+ PATGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTE 59

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             L+IRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    60 LVIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 119

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   120 MPKDIQLARRIRGERA 135


 >gi|12730614  ref|XP_011165.1| similar to H3 histone, family 3A (H. sapiens)
            [Homo sapiens]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 641 (225.6 bits), Expect = 8.9e-62, P = 8.9e-62
 Identities = 126/136 (92%), Positives = 133/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LL+RKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct:    61 LLVRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLA  IRGERA
Sbjct:   121 MPKDIQLAHSIRGERA 136


 >gi|484530|pir||JQ1983  H3.3 like histone MH921 - mouse
            Length = 135

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:          ____                ____                      
                        __________________________________________________
Database sequence:     |                  |                 |             | 135
                       0                 50               100
__________________

Annotated Domains:
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    14..20
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    66..74
__________________


  Plus Strand HSPs:

 Score = 639 (224.9 bits), Expect = 1.4e-61, P = 1.4e-61
 Identities = 126/135 (93%), Positives = 133/135 (98%), Frame = +3

Query:    69 ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTEL 248
             ARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTEL
Sbjct:     1 ARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTEL 60

Query:   249 LIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIM 428
             LIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA+HAKRVTIM
Sbjct:    61 LIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAVHAKRVTIM 120

Query:   429 PKDIQLARRIRGERA 473
             PKDIQLA RIRGERA
Sbjct:   121 PKDIQLACRIRGERA 135


 >gi|10253|emb|CAA24647.1|  (V01356) reading frame of H3 [Strongylocentrotus
            purpuratus]
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100

  Plus Strand HSPs:

 Score = 637 (224.2 bits), Expect = 2.4e-61, P = 2.4e-61
 Identities = 128/136 (94%), Positives = 132/136 (97%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKT+LRFQSSAV ALQEA+EAYLVG   DTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGXXXDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


 >gi|122074|sp|P02302|H32_XENLA  HISTONE H3.2
            Length = 136

Frame  3 hits (HSPs):   __________________________________________________
Annotated Domains:      _________________________________________________ 
                        __________________________________________________
Database sequence:     |                  |                 |             | 136
                       0                 50               100
__________________

Annotated Domains:
   PFAM                 histone: Core histone H2A/H2B/H3/H4      16..134
   PRINTS               1: Histone H3 motif I - 2       2..16
   PRINTS               2: Histone H3 motif II - 2      16..30
   PRINTS               3: Histone H3 motif III - 2     33..54
   PRINTS               4: Histone H3 motif IV - 2      57..74
   PRINTS               5: Histone H3 motif V - 2       79..97
   PRINTS               6: Histone H3 motif VI - 2      97..113
   PRINTS               7: Histone H3 motif VII - 2     113..134
   PRODOM               PD001230: H3(14) H32(5) H33(4)           12..58
   PRODOM               PD000978: H3(15) H32(5) H33(4)           60..134
   PROSITE              HISTONE_H3_1: Histone H3 signature 1.    15..21
   PROSITE              HISTONE_H3_2: Histone H3 signature 2.    67..75
__________________


  Plus Strand HSPs:

 Score = 636 (223.9 bits), Expect = 3.0e-61, P = 3.0e-61
 Identities = 127/136 (93%), Positives = 131/136 (96%), Frame = +3

Query:    66 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 245
             MARTKQTARKSTGGKAPRKQL TKAA+K APATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct:     1 MARTKQTARKSTGGKAPRKQLVTKAAKKCAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query:   246 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 425
             LLIRKLPFQRLVREIAQDFKTDLRFQ SAV ALQEA+EAYLV LFEDTNLCAIHAKRVTI
Sbjct:    61 LLIRKLPFQRLVREIAQDFKTDLRFQRSAVMALQEASEAYLVALFEDTNLCAIHAKRVTI 120

Query:   426 MPKDIQLARRIRGERA 473
             MPKDIQLARRIRGERA
Sbjct:   121 MPKDIQLARRIRGERA 136


WARNING:  HSPs involving 248 database sequences were not reported due to the
          limiting value of parameter B = 50.


Parameters:
  filter=none
  matrix=BLOSUM62
  V=50
  B=50
  E=10
  gi
  H=1
  sort_by_pvalue
  echofilter

  ctxfactor=5.99

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   Std.    0   BLOSUM62                                 0.318   0.135   0.401  
   +3      0   BLOSUM62        0.318   0.135   0.401    0.338   0.146   0.442  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +2      0   BLOSUM62        0.318   0.135   0.401    0.340   0.147   0.497  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +1      0   BLOSUM62        0.318   0.135   0.401    0.342   0.150   0.533  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -1      0   BLOSUM62        0.318   0.135   0.401    0.350   0.151   0.512  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -2      0   BLOSUM62        0.318   0.135   0.401    0.347   0.154   0.568  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -3      0   BLOSUM62        0.318   0.135   0.401    0.337   0.149   0.489  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
   +3      0      193       192       10.  76 3  12 22  0.12    34
                                                    31  0.098   38
   +2      0      194       193       10.  76 3  12 22  0.12    34
                                                    31  0.099   38
   +1      0      194       193       10.  76 3  12 22  0.12    34
                                                    31  0.099   38
   -1      0      194       193       10.  76 3  12 22  0.12    34
                                                    31  0.099   38
   -2      0      194       193       10.  76 3  12 22  0.12    34
                                                    31  0.099   38
   -3      0      193       192       10.  76 3  12 22  0.12    34
                                                    31  0.098   38


Statistics:

  Database:  /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
    Title:  nr
    Release date:  unknown
    Posted date:  4:06 PM CST Feb 28, 2001
    Format:  BLAST
  # of letters in database:  197,782,623
  # of sequences in database:  625,274
  # of database sequences satisfying E:  298
  No. of states in DFA:  594 (59 KB)
  Total size of DFA:  203 KB (256 KB)
  Time to generate neighborhood:  0.01u 0.00s 0.01t  Elapsed: 00:00:00
  No. of threads or processors used:  6
  Search cpu time:  204.01u 0.96s 204.97t  Elapsed: 00:00:43
  Total cpu time:  204.08u 0.97s 205.05t  Elapsed: 00:00:43
  Start:  Thu Jan 17 12:52:24 2002   End:  Thu Jan 17 12:53:07 2002

WARNINGS ISSUED:  2


Annotated Domains Database:   March 14, 2000 

Release Date:  March 14, 2000