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Submitted SNP(ss) Details: ss921978           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-250213
RefSNP(rs#)rs781141
Submitted Batch IDOVLP-000804-1
Submitted DateSep 01, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 1 2000 12:00:00:000AM
Resource Links
GenBank AccessionAC027550.2
AC073261.2
Submitted Gene NameN.D
Submitted Gene IDN.D.
Submitted SNP SynonymsN.D
Submitted linkoutN.D
Submission reportview
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral Allele
SNP Classsingle base
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC027550 SequenceAccession1:AC027550 SequenceVersion1:2 SequenceContigName1:Contig15 SequenceContigPosition1:1416 SequenceLocalName2:AC073261 SequenceAccession2:AC073261 SequenceVersion2:2 SequenceContigName2:Contig29 SequenceContigPosition2:1063 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss921978|allelePos=618|len=1254|taxid=9606|alleles='G/A'|mol=Genomic
 GTCAAGAGGC ATTTCTACCA CCTCTCCTGC TTCTACCCCA AGTGAAAAAT CCAACTCTGA
 ACGCTGAGTT AGAACTGCAC GATTGTAAGG AAGAAAAGGG ggccaggtgt ggtggttcac
 acctgtaatc ccagcacttt gggaaggtga ggcaggagga tcactagagg ccaggagttc
 cacgccagcc tggcaaacat ggtgaaaccc agtctctaat tagccgggca cggtggctca
 cgcctgtaat cccagcactc tgggaggccg aggtaagtgg atctcctgag gtcagtagtc
 caagaccagc ctggcccaac atagtgaaac cccgtctcta ctgaaaaatg caaaagttgg
 ccaggcgtgg tagctcacgc ctgtaatccg agcacttcag gaggccgagg caggcggatc
 atgagttcaa gagatcgaga ccatcctagc caaaatggtg aaaccccgtc tctgctaaaa
 atacaaaaat tagcagggta tgttggcgtg tgcctgtaat cccaactcct caggaggctg
 aggcaggaga atcacttgaa cctggaaggt gaaggttgca gtgagacgag attgcgccac
 tgcactccag cctggcc
 R
 cggagtgaga ctccatctca taaaaaggaa aaaaggaaaa cttagctggg cgtggtggca
 tgtgcctgta atcccagcta ctcgggaggc tgaggctgga gaatcacttg aacctgagcg
 gcagaggttg cagtgagctg agatcatgcc cctgcactcc atcctgggca atagagggag
 actgcatatc caaaaaataa aaaataaagc aaaaattagc tgggtgtgat gacacacatc
 tagaatccca gctacttggg aggctgagac aggaggatca cctgagcctg ggaagtcaag
 gctgcagtaa gccaaaactg caccgctgca ctccaacctg ggcaaccaga gtgagaaccc
 attttgaaaa aaaaaaaCAG CCCCAGCACA GTGGTTCATG Ggtgcctgta atcctagcta
 ctcaggagac tgaggcagga gaatcacttg aacccaggag gcagaggttg taatgagcgg
 agatcacccc actgcactcc agcctgggcc atatagtgag actccatctc aaaaagaaaa
 aaaaagaaca aaaaagaaaa CCACAATTTG GGTGGGTAGA TATTTGGTCC CCTGAACTAT
 CTGGGTATGG ACGGCCTTCC CATTGGGCTG GACACG

  Submitted Frequency for ss921978 back to top
There is no frequency submission for ss921978.

  dbSNP summary of Genotypes for ss921978 back to top
No sufficient data to compute Hardy-weinberg probability for ss921978.

  Submitted individual genotype for ss921978 back to top
There is no individual genotype data for ss921978.

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Revised: May 25, 2006 1:38 PM .