NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:143716     UniGene Hs.106876     Homo sapiens (human)   ATP6V0D1 Order cDNA clone, Links
ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 (ATP6V0D1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_038505.2 ATPase, H+ transporting, V0 subunit D isoform 1 M. musculus 100.0 350
NP_001011927.1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 R. norvegicus 100.0 350
NP_004682.2 ATPase, H+ transporting, lysosomal, V0 subunit d1 H. sapiens 100.0 350
XP_536816.2 PREDICTED: similar to ATPase, H+ transporting, lysosomal, V0 subunit D isoform 1 isoform 1 C. lupus familiaris 100.0 350
XP_001497719.1 PREDICTED: ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 E. caballus 100.0 350
NP_776930.1 ATPase, H+ transporting, lysosomal, V0 subunit d1 B. taurus 100.0 350
XP_001163802.1 PREDICTED: similar to 32 kd accessory protein isoform 1 P. troglodytes 99.7 350
NP_001080200.1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 X. laevis 97.7 350
NP_955914.1 ATPase, H+ transporting, V0 subunit D isoform 1 D. rerio 97.1 347
NP_570080.1 VhaAC39 CG2934-PA D. melanogaster 84.8 348
NP_491515.2 Vacuolar H ATPase family member (vha-16) C. elegans 80.3 345
NP_189512.1 H+-transporting two-sector ATPase, putative A. thaliana 60.6 347
XP_322653.1 VACUOLAR ATP SYNTHASE SUBUNIT D (V-ATPASE D SUBUNIT) (VACUOLAR PROTON PUMP D SUBUNIT) (V-ATPASE 41 KDA SUBUNIT) N. crassa 57.7 363
XP_001703440.1 vacuolar H+ ATPase V0 sector, subunit D C. reinhardtii 56.0 347
NP_013552.1 Subunit d of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found in the endomembrane system; stabilizes VO subunits; required for V1 domain assembly on the vacuolar membrane; Vma6p S. cerevisiae 51.9 344

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; placenta; testis; lung; uncharacterized tissue; intestine; pancreas; skin; prostate; cervix; stomach; blood; thyroid; adrenal gland; spleen; ovary; pituitary gland; umbilical cord; trachea; epididymis; liver; mixed; tonsil; eye; kidney; mammary gland; uterus; pharynx; vascular; bone marrow; embryonic tissue; heart; muscle; larynx; salivary gland; lymph; ascites; connective tissue; thymus; bone; lymph node; parathyroid; esophagus; nerve; ganglia; pineal gland; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q22
UniSTS entry: Chr 16 RH11782
UniSTS entry: Chr Y (n/a)
UniSTS entry: Chr Y D11S3114
UniSTS entry: Chr Y D1S1425
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (29)

AK128641.1 Homo sapiens cDNA FLJ46800 fis, clone TRACH3031936, highly similar to Vacuolar ATP synthase subunit d (EC 3.6.1.34) P
AK125522.1 Homo sapiens cDNA FLJ43534 fis, clone PLACE7001936
L05087.1 Homo sapiens proton ATPase accessory subunit mRNA, partial cds P
CR624642.1 full-length cDNA clone CS0DF013YA09 of Fetal brain of Homo sapiens (human) P
CR622440.1 full-length cDNA clone CS0DF022YE19 of Fetal brain of Homo sapiens (human) P
CR620569.1 full-length cDNA clone CS0DF007YD21 of Fetal brain of Homo sapiens (human) P
CR619627.1 full-length cDNA clone CS0DF030YH07 of Fetal brain of Homo sapiens (human) P
CR619069.1 full-length cDNA clone CS0DF022YA19 of Fetal brain of Homo sapiens (human) P
CR618424.1 full-length cDNA clone CS0DI078YB05 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR617838.1 full-length cDNA clone CS0DF029YF08 of Fetal brain of Homo sapiens (human) P
CR615039.1 full-length cDNA clone CS0DC023YF12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
CR614575.1 full-length cDNA clone CS0DF003YB22 of Fetal brain of Homo sapiens (human) P
CR613366.1 full-length cDNA clone CS0DI078YL17 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR609995.1 full-length cDNA clone CS0DI011YN20 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR609191.1 full-length cDNA clone CS0DF004YK10 of Fetal brain of Homo sapiens (human) P
CR607021.1 full-length cDNA clone CS0DI014YN17 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR606968.1 full-length cDNA clone CS0DF003YF11 of Fetal brain of Homo sapiens (human) P
CR602697.1 full-length cDNA clone CS0DI081YE02 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR602420.1 full-length cDNA clone CS0DM004YP22 of Fetal liver of Homo sapiens (human) P
CR601254.1 full-length cDNA clone CS0DI072YB02 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR599418.1 full-length cDNA clone CS0DN005YI13 of Adult brain of Homo sapiens (human) P
CR599242.1 full-length cDNA clone CS0DD005YH03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) P
CR597772.1 full-length cDNA clone CS0DF025YO20 of Fetal brain of Homo sapiens (human) P
CR595600.1 full-length cDNA clone CS0DI034YD12 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR594427.1 full-length cDNA clone CS0DK001YN21 of HeLa cells Cot 25-normalized of Homo sapiens (human) P
CR591810.1 full-length cDNA clone CS0DI003YD24 of Placenta Cot 25-normalized of Homo sapiens (human) P
BC008861.2 Homo sapiens ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1, mRNA (cDNA clone MGC:15351 IMAGE:4126712), complete cds PA
AK313035.1 Homo sapiens cDNA, FLJ93507, highly similar to Homo sapiens ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d isoform 1 (ATP6V0D1), mRNA P
NM_004691.4 Homo sapiens ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 (ATP6V0D1), mRNA PA

EST sequences (10 of 871) [Show all sequences]

T05486.1 Clone HFBCZ41 brain P
T05487.1 Clone HFBCZ41 brain P
AA984333.1 Clone IMAGE:1629798 brain 3' read P
AA985012.1 Clone IMAGE:1577210 spleen 3' read A
AA834184.1 Clone IMAGE:1421169 kidney
AI023979.1 Clone IMAGE:1650965 parathyroid 3' read A
AI042412.1 Clone IMAGE:1665009 skin 3' read A
AI050886.1 Clone IMAGE:1668983 brain 3' read A
AA948652.1 Clone IMAGE:1588552 kidney 3' read A
R21401.1 Clone IMAGE:36306 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help