proteins
1 BUDs| 15 proteins |
S | COG0401 | Uncharacterized homolog of Blt101 | Help | |
|---|---|---|---|---|---|
| 4 from | query genome Saccharomyces cerevisiae (Saccharomycetales | Saccharomycetes) | ||||
| 1 BUDs | YDL123w YDR276c (YDR525w-a YJL151c ) | ||||
133 letters 0
0 696 = |||YJL151c (133) = -16
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= YJL151c
(133 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
YJL151c 272 7e-74
YDR525w-a 69 2e-12
YDL123w 50 6e-07
asr3796 42 2e-04
SPCC1183.09c 42 2e-04
YDR276c 42 3e-04
PA0567 41 4e-04
SPBC713.11c 39 0.002
AGc727 37 0.007
CAC2802 36 0.015
ECs3527 34 0.044
Cgl0704 30 0.64
CC3590 30 1.1
Rv3456c 29 1.9
MT3563 29 1.9
AGl128GM 28 2.4
APE0199 28 3.2
SPAC25A8.01c 28 4.1
CC3352 28 4.1
BH0696 27 7.0
# >YJL151c
# Length = 133
#
# Score = 272 bits (696), Expect = 7e-74
# Identities = 133/133 (100%), Positives = 133/133 (100%)
#
# Query: 1 MDRDHINDHDHRMSYSINKDDLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFP 60
# MDRDHINDHDHRMSYSINKDDLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFP
# Sbjct: 1 MDRDHINDHDHRMSYSINKDDLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFP 60
#
# Query: 61 AIIHACYVVYETSSERSYDLSRRHATAPAVDRDLEAHPAEESQAQPPAYDEDDEAGADVP 120
# AIIHACYVVYETSSERSYDLSRRHATAPAVDRDLEAHPAEESQAQPPAYDEDDEAGADVP
# Sbjct: 61 AIIHACYVVYETSSERSYDLSRRHATAPAVDRDLEAHPAEESQAQPPAYDEDDEAGADVP 120
#
# Query: 121 LMDNKQQLSSGRT 133
# LMDNKQQLSSGRT
# Sbjct: 121 LMDNKQQLSSGRT 133
#
#
# >YDR525w-a
# Length = 79
#
# Score = 68.6 bits (166), Expect = 2e-12
# Identities = 33/65 (50%), Positives = 44/65 (66%), Gaps = 4/65 (6%)
#
# Query: 21 DLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVV----YETSSER 76
# D L+ +A+FIPP+AVW ++G F +D L+N LLFLL FFP +IHA YV+ YE + R
# Sbjct: 5 DWFLVFIAIFIPPLAVWLKRGFFTKDLLINFLLFLLGFFPGLIHALYVISCHPYEENEAR 64
#
# Query: 77 SYDLS 81
# LS
# Sbjct: 65 YSHLS 69
#
#
# >YDL123w
# Length = 140
#
# Score = 50.4 bits (119), Expect = 6e-07
# Identities = 26/57 (45%), Positives = 35/57 (60%)
#
# Query: 21 DLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYETSSERS 77
# D +L ++A F PP AV R G + D LLN+LL LL F P ++HA Y + TS R+
# Sbjct: 12 DFILYIVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFYYITITSPLRN 68
#
#
# >asr3796
# Length = 52
#
# Score = 42.0 bits (97), Expect = 2e-04
# Identities = 19/49 (38%), Positives = 34/49 (68%), Gaps = 1/49 (2%)
#
# Query: 21 DLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVV 69
# DL+ ++ A+F PP+ V+ + G+ +D +N+LL LL + P I+HA +V+
# Sbjct: 2 DLVRLLCAIFFPPLGVFLQVGI-GKDFWINILLTLLGYIPGIVHAVWVI 49
#
#
# >SPCC1183.09c
# Length = 105
#
# Score = 42.0 bits (97), Expect = 2e-04
# Identities = 22/54 (40%), Positives = 32/54 (58%), Gaps = 1/54 (1%)
#
# Query: 16 SINKDDLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVV 69
# ++ D LL+VL+ F+P + V R+G D L+N+ L L P IIHA Y+V
# Sbjct: 3 NVTLSDFLLIVLSFFVPFIVVGIRRGFCTADFLINICL-CALGIPGIIHAIYIV 55
#
#
# >YDR276c
# Length = 55
#
# Score = 41.6 bits (96), Expect = 3e-04
# Identities = 16/50 (32%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
#
# Query: 22 LLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYE 71
# ++ ++L++F+PPVAV+ +G + D +++++L +L +FP +++A Y+V +
# Sbjct: 6 IINIILSLFLPPVAVFLARG-WGTDCIVDIILTILAWFPGMLYALYIVLQ 54
#
#
# >PA0567
# Length = 52
#
# Score = 41.2 bits (95), Expect = 4e-04
# Identities = 19/49 (38%), Positives = 33/49 (66%), Gaps = 1/49 (2%)
#
# Query: 21 DLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVV 69
# DL+ +++A+ +PP+ V+ + G F LN+LL LL + P I+HA Y++
# Sbjct: 2 DLIRILIAILLPPLGVFLQVG-FGGAFWLNILLTLLGYIPGIVHAVYII 49
#
#
# >SPBC713.11c
# Length = 50
#
# Score = 38.9 bits (89), Expect = 0.002
# Identities = 16/45 (35%), Positives = 29/45 (63%), Gaps = 1/45 (2%)
#
# Query: 25 MVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVV 69
# ++ A+ +PP+ V+ +G D ++N+LL L + P IIHA Y++
# Sbjct: 4 VIFAIILPPLGVFLERGC-GADVIINILLCCLGYVPGIIHALYII 47
#
#
# >AGc727
# Length = 80
#
# Score = 37.0 bits (84), Expect = 0.007
# Identities = 18/49 (36%), Positives = 32/49 (64%), Gaps = 1/49 (2%)
#
# Query: 21 DLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVV 69
# D++ +++A+ +PPV V+ + G+ LN+LL L + P IIHA +V+
# Sbjct: 30 DVIRILIAIILPPVGVFLQVGL-GLQFWLNILLTLCGYVPGIIHAIWVI 77
#
#
# >CAC2802
# Length = 627
#
# Score = 35.8 bits (81), Expect = 0.015
# Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
#
# Query: 17 INKDDLLLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYETSSER 76
# I+K D+L +V I P ++ RK ++ + + N++LFL+LF + I+ YV ++ ++
# Sbjct: 143 IHKSDILFIVDLFVIVPFSIINRK-IYEKHSR-NIVLFLVLFSVSAIYTIYVPFKVNTLN 200
#
# Query: 77 SYDLSR 82
# YD+ +
# Sbjct: 201 KYDVEQ 206
#
#
# >ECs3527
# Length = 52
#
# Score = 34.3 bits (77), Expect = 0.044
# Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
#
# Query: 25 MVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYV 68
# +V+ + +PP+ V KG F ++N+LL LL + P +IHA +V
# Sbjct: 6 IVITIILPPLGVLLGKG-FGWAFIINILLTLLGYIPGLIHAFWV 48
#
#
# >Cgl0704
# Length = 344
#
# Score = 30.4 bits (67), Expect = 0.64
# Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
#
# Query: 39 RKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYETSSERSYDLSRRHAT----APAVDRDL 94
# R+ FN + L+ L+FLL+FF A I ++ + S +R + T A D +
# Sbjct: 273 RQNNFNSASALSTLIFLLIFFVAFIMIRFLGADVSGQRGIKKKKLGGTKDEKPTAKDAVV 332
#
# Query: 95 EAHPAEESQAQP 106
# +A A + A+P
# Sbjct: 333 KADSAVKEAAKP 344
#
#
# >CC3590
# Length = 188
#
# Score = 29.6 bits (65), Expect = 1.1
# Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
#
# Query: 78 YDLSRRHATAPAVDRDLEAHPAEESQ-----AQPPAYDEDDEAGADVP 120
# YDL+RR A P + A +S+ A P YD DDE A P
# Sbjct: 52 YDLNRRPAVCPKCGEQFDPEEALKSRRVRARAVTPDYDADDEKEAVAP 99
#
#
# >Rv3456c
# Length = 180
#
# Score = 28.9 bits (63), Expect = 1.9
# Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
#
# Query: 68 VVYETSSERSYDLSRRHATAPAVDRDLEAHPAEESQAQPPAYDEDDEAGADVP 120
# +V E + + +RR A A A + A P EES+A+P +E D GA P
# Sbjct: 115 LVREKTVTSEANRARRVAAAQAKAKKAAAMPTEESEAKPA--EEGDVVGASEP 165
#
#
# >MT3563
# Length = 180
#
# Score = 28.9 bits (63), Expect = 1.9
# Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
#
# Query: 68 VVYETSSERSYDLSRRHATAPAVDRDLEAHPAEESQAQPPAYDEDDEAGADVP 120
# +V E + + +RR A A A + A P EES+A+P +E D GA P
# Sbjct: 115 LVREKTVTSEANRARRVAAAQAKAKKAAAMPTEESEAKPA--EEGDVVGASEP 165
#
#
# >AGl128GM
# Length = 267
#
# Score = 28.5 bits (62), Expect = 2.4
# Identities = 19/67 (28%), Positives = 37/67 (54%), Gaps = 11/67 (16%)
#
# Query: 24 LMVLAVFIPPVAV------WKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYETSSERS 77
# L+V+ IP +A+ W G+ ++ LL+FLL FFP ++++ V +++
# Sbjct: 99 LLVILQIIPKIAIAPLFIIWVGFGLPSKI----LLVFLLSFFPIVVNS-IVAFKSIEPDV 153
#
# Query: 78 YDLSRRH 84
# YDL++ +
# Sbjct: 154 YDLAKSY 160
#
#
# >APE0199
# Length = 418
#
# Score = 28.1 bits (61), Expect = 3.2
# Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
#
# Query: 35 AVWKRKGMFNRDTLLNLLLFLLLFFPAIIH--ACYVVYETSSERSYDLSRRHATAPA 89
# ++W+R +F L+ +++ L+ P ++H +V+ ET + + + R PA
# Sbjct: 230 SIWRRLAVFTAGLLIGGSVYIALYAPLVLHFGPMWVIEETINALKWHTTSRPPGPPA 286
#
#
# >SPAC25A8.01c
# Length = 922
#
# Score = 27.7 bits (60), Expect = 4.1
# Identities = 12/30 (40%), Positives = 20/30 (66%)
#
# Query: 101 ESQAQPPAYDEDDEAGADVPLMDNKQQLSS 130
# E++ + P+Y +D+EA +PL + Q LSS
# Sbjct: 137 ETEPKMPSYMDDEEASDSLPLSLSSQSLSS 166
#
#
# >CC3352
# Length = 524
#
# Score = 27.7 bits (60), Expect = 4.1
# Identities = 12/52 (23%), Positives = 25/52 (48%)
#
# Query: 55 LLLFFPAIIHACYVVYETSSERSYDLSRRHATAPAVDRDLEAHPAEESQAQP 106
# + ++FP ++H ++ T +E ++L R A A+ +A E + P
# Sbjct: 441 MTMYFPLVVHGAMLIEPTETESKHELDRFIAALRALAGAAKAGDTERFKGAP 492
#
#
# >BH0696
# Length = 792
#
# Score = 26.9 bits (58), Expect = 7.0
# Identities = 18/67 (26%), Positives = 29/67 (42%), Gaps = 12/67 (17%)
#
# Query: 78 YDLSRRHATAPAVDRDLEAHPAEESQAQPPAYDE------------DDEAGADVPLMDNK 125
# Y L++ ++ P + + E PAE Q QP E D+E + P D +
# Sbjct: 370 YGLAQYVSSTPPDEEENEESPAENPQEQPSDGKENEGSEDQGSTPPDEEENEESPAEDPQ 429
#
# Query: 126 QQLSSGR 132
# +Q S G+
# Sbjct: 430 EQPSDGK 436
#
#
Database: myva
Posted date: Sep 17, 2002 10:27 AM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.321 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,115,225
Number of Sequences: 192987
Number of extensions: 551630
Number of successful extensions: 1520
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1491
Number of HSP's gapped (non-prelim): 39
length of query: 133
length of database: 59,019,183
effective HSP length: 109
effective length of query: 24
effective length of database: 37,983,600
effective search space: 911606400
effective search space used: 911606400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
S2: 57 (26.6 bits)