AVA-P2 (vacuolar-H+-pumping ATPase 16 kDa proteolipid subunit 2); ATPase (AVA-P2)

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UGID:10163 UniGene At.23589 Arabidopsis thaliana (thale cress) AVA-P2

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AVA-P2 (vacuolar-H+-pumping ATPase 16 kDa proteolipid subunit 2); ATPase (AVA-P2)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_564098.2	AVA-P2 (vacuolar-H+-pumping ATPase 16 kDa proteolipid subunit 2); ATPase	A. thaliana	100.0	164
XP_001696361.1	vacuolar H(+)-ATPase V0 sector, c/c' subunits	C. reinhardtii	94.1	169
NP_500188.1	Vacuolar H ATPase family member (vha-3)	C. elegans	70.8	147
NP_991117.1	atp6v0c-like protein	D. rerio	69.4	146
XP_961418.2	vacuolar ATP synthase 16 kDa proteolipid subunit	N. crassa	68.0	147
NP_476801.1	Vacuolar H[+] ATPase 16kD subunit CG3161-PA, isoform A	D. melanogaster	66.7	158
XP_001477166.1	PREDICTED: similar to vacuolar H(+)-ATPase	M. musculus	65.2	154
NP_001082675.1	hypothetical protein LOC398647	X. laevis	64.5	151
NP_001685.1	ATPase, H+ transporting, lysosomal, V0 subunit c	H. sapiens	63.9	154
NP_015090.1	Vacuolar ATPase V0 domain subunit c', involved in proton transport activity; hydrophobic integral membrane protein (proteolipid) containing four transmembrane segments; N and C termini are in the vacuolar lumen; Tfp3p	S. cerevisiae	59.4	159

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; unspecified tissue; whole plant; root; flower; seed; silique; leaf; floral meristem; bud

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

L44582.1	Arabidopsis thaliana vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2) mRNA, complete cds	P
L44585.1	Arabidopsis thaliana vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2e) mRNA, complete cds	P
NM_101846.3	Arabidopsis thaliana AVA-P2 (vacuolar-H+-pumping ATPase 16 kDa proteolipid subunit 2); ATPase (AVA-P2) mRNA, complete cds	P
BX816345.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH42ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	P
BX817558.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL30ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	P
BT024867.1	Arabidopsis thaliana At1g19910 gene, complete cds	P

EST sequences (10 of 212) [Show all sequences]

T44168.1	Clone 122P2T7	mixed		P
T44497.1	Clone 125O13T7	mixed		P
AA041109.1	Clone E1G1T7	seed
T22297.1	Clone 103H7T7	mixed
BE845279.1	Clone AD09D05	mixed
AV532815.1	Clone FB050e11F	bud	3' read	A
AV535460.1	Clone FB096g06F	bud	3' read	PA
AV557912.1	Clone SQ084a07F	silique	3' read	A
AV566845.1	Clone SQL01e09F	silique	3' read
AV567659.1	Clone SQL18e07F	silique	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria