PF03098	PF00008	An_peroxidase	EGF	P05979	P05979	B	A
PF03098	PF03098	An_peroxidase	An_peroxidase	P05979	P05979	B	A
PF01751	PF08275	Toprim	Toprim_N	P02923	P02923	C	B
PF01751	PF01751	Toprim	Toprim	P02923	P02923	C	B
PF08275	PF08275	Toprim_N	Toprim_N	P02923	P02923	D	C
PF00436	PF00436	SSB	SSB	P02339	P02339	C	D
PF02938	PF02938	GAD	GAD	P21889	P21889	C	B
PF02938	PF00152	GAD	tRNA-synt_2	P21889	P21889	C	A
PF00152	PF01336	tRNA-synt_2	tRNA_anti	P21889	P21889	B	A
PF00152	PF00152	tRNA-synt_2	tRNA-synt_2	P21889	P21889	A	B
PF00048	PF00048	IL8	IL8	P13501	P13501	B	A
PF00106	PF00106	adh_short	adh_short	P14061	P14061	B	A
PF00080	PF00080	Sod_Cu	Sod_Cu	P53636	P53636	C	B
PF00022	PF00626	Actin	Gelsolin	P68135	P06396	A	S
PF00125	PF00125	Histone	Histone	P84229	P02263	C	E
PF00400	PF00400	WD40	WD40	P16649	P16649	C	A
PF00041	PF00041	fn3	fn3	P19235	P19235	B	A
PF07654	PF07654	C1-set	C1-set	Q31135	P04228	B	A
PF07654	PF00993	C1-set	MHC_II_alpha	Q31135	P04228	B	A
PF01064	PF00019	Activin_recp	TGF_beta	P12643	P36894	C	D
PF00019	PF00019	TGF_beta	TGF_beta	P12643	P12643	C	A
PF01279	PF01279	Parathyroid	Parathyroid	P01270	P01270	B	A
PF01123	PF01123	Stap_Strp_toxin	Stap_Strp_toxin	Q9RQQ5	Q9RQQ5	A	B
PF00042	PF00042	Globin	Globin	P02070	P01966	D	C
PF00459	PF00459	Inositol_P	Inositol_P	Q57573	Q57573	B	A
PF00483	PF00483	NTP_transferase	NTP_transferase	Q9HU22	Q9HU22	D	C
PF00293	PF00293	NUDIX	NUDIX	Q93K97	Q93K97	B	A
PF00227	PF00227	Proteasome	Proteasome	P40303	P23638	Q	P
PF00148	PF00148	Oxidored_nitro	Oxidored_nitro	P07329	P07328	D	C
PF00142	PF00148	Fer4_NifH	Oxidored_nitro	P07329	P00459	D	G
PF00142	PF00142	Fer4_NifH	Fer4_NifH	P00459	P00459	E	F
PF03496	PF03496	Binary_toxA	Binary_toxA	P15879	P15879	A	D
PF00155	PF00155	Aminotran_1_2	Aminotran_1_2	P95468	P95468	B	A
PF00177	PF00380	Ribosomal_S7	Ribosomal_S9	P80374	P17291	I	G
PF00338	PF00380	Ribosomal_S10	Ribosomal_S9	P80374	P80375	I	J
PF03719	PF00410	Ribosomal_S5_C	Ribosomal_S8	P27152	P24319	E	H
PF00163	PF03719	Ribosomal_S4	Ribosomal_S5_C	P27152	P80373	E	D
PF00318	PF00410	Ribosomal_S2	Ribosomal_S8	P80371	P24319	B	H
PF01084	PF01250	Ribosomal_S18	Ribosomal_S6	P23370	P80382	F	R
PF00416	PF00203	Ribosomal_S13	Ribosomal_S19	P80381	P80377	S	M
PF00164	PF00410	Ribosomal_S12	Ribosomal_S8	P24319	P17293	H	L
PF00366	PF00410	Ribosomal_S17	Ribosomal_S8	P24319	P24321	H	Q
PF00411	PF00177	Ribosomal_S11	Ribosomal_S7	P17291	P80376	G	K
PF00164	PF00366	Ribosomal_S12	Ribosomal_S17	P17293	P24321	L	Q
PF00189	PF00333	Ribosomal_S3_C	Ribosomal_S5	P27152	P80372	E	C
PF00163	PF00333	Ribosomal_S4	Ribosomal_S5	P27152	P80373	E	D
PF00338	PF00253	Ribosomal_S10	Ribosomal_S14	P80375	P24320	J	N
PF00338	PF00417	Ribosomal_S10	Ribosomal_S3_N	P80375	P80372	J	C
PF00253	PF00417	Ribosomal_S14	Ribosomal_S3_N	P24320	P80372	N	C
PF00046	PF00046	Homeobox	Homeobox	P06601	P06601	A	B
PF00149	PF00149	Metallophos	Metallophos	P62139	P62139	B	A
PF06652	PF06652	Methuselah_N	Methuselah_N	O97148	O97148	A	B
PF00008	PF00089	EGF	Trypsin	P00742	P00742	A	L
PF06817	PF00075	RVT_thumb	RnaseH	P04585	P04585	B	A
PF06815	PF06815	RVT_connect	RVT_connect	P04585	P04585	A	B
PF00078	PF06815	RVT_1	RVT_connect	P04585	P04585	A	B
PF00078	PF00078	RVT_1	RVT_1	P04585	P04585	A	B
PF00254	PF00254	FKBP_C	FKBP_C	P62942	P62942	B	A
PF00026	PF00026	Asp	Asp	P56817	P56817	B	A
PF06815	PF00075	RVT_connect	RnaseH	P04585	P04585	B	A
PF00078	PF00075	RVT_1	RnaseH	P04585	P04585	A	B
PF00716	PF00716	Peptidase_S21	Peptidase_S21	O36607	O36607	B	A
PF00236	PF00236	Hormone_6	Hormone_6	P01215	P01215	A	C
PF00007	PF00236	Cys_knot	Hormone_6	P01215	P01225	A	B
PF00007	PF00007	Cys_knot	Cys_knot	P01225	P01225	B	D
PF02367	PF02367	UPF0079	UPF0079	P44492	P44492	A	C
PF02391	PF02597	MoaE	ThiS	P30748	P30749	D	E
PF01804	PF01804	Penicil_amidase	Penicil_amidase	Q9L5D6	Q9L5D6	B	A
PF02431	PF02431	Chalcone	Chalcone	P28012	P28012	B	A
PF02258	PF02258	SLT_beta	SLT_beta	Q47644	Q47644	E	A
PF02305	PF02306	Phage_F	Phage_G	P03643	P03641	2	1
PF00077	PF00077	RVP	RVP	P04587	P04587	B	A
PF00139	PF00139	Lectin_legB	Lectin_legB	P02867	P02867	B	A
PF00295	PF00295	Glyco_hydro_28	Glyco_hydro_28	P26213	P26213	B	D
PF02709	PF00062	Galactosyl_T_2	Lys	P08037	P29752	B	A
PF02709	PF02709	Galactosyl_T_2	Galactosyl_T_2	P08037	P08037	B	D
PF00334	PF00334	NDK	NDK	P15266	P15266	R	L
PF00998	PF00998	RdRP_3	RdRP_3	O39930	O39930	A	B
PF01126	PF01126	Heme_oxygenase	Heme_oxygenase	P09601	P09601	C	D
PF00394	PF00394	Cu-oxidase	Cu-oxidase	P25006	P25006	B	A
PF00394	PF07732	Cu-oxidase	Cu-oxidase_3	P25006	P25006	B	A
PF04998	PF03871	RNA_pol_Rpb1_5	RNA_pol_Rpb5_N	P20434	P04050	E	A
PF01193	PF00562	RNA_pol_L	RNA_pol_Rpb2_6	P16370	P08518	C	B
PF01193	PF01194	RNA_pol_L	RNA_pol_N	P16370	P22139	C	J
PF01193	PF03870	RNA_pol_L	RNA_pol_Rpb8	P16370	P20436	C	H
PF01193	PF04983	RNA_pol_L	RNA_pol_Rpb1_3	P16370	P04050	C	A
PF01193	PF01193	RNA_pol_L	RNA_pol_L	P16370	P38902	C	K
PF01193	PF05000	RNA_pol_L	RNA_pol_Rpb1_4	P16370	P04050	C	A
PF04992	PF01192	RNA_pol_Rpb1_6	RNA_pol_Rpb6	P04050	P20435	A	F
PF04992	PF01191	RNA_pol_Rpb1_6	RNA_pol_Rpb5_C	P04050	P20434	A	E
PF04992	PF03870	RNA_pol_Rpb1_6	RNA_pol_Rpb8	P04050	P20436	A	H
PF03604	PF01000	DNA_RNApol_7kD	RNA_pol_A_bac	P40422	P16370	L	C
PF03604	PF00562	DNA_RNApol_7kD	RNA_pol_Rpb2_6	P40422	P08518	L	B
PF03604	PF04563	DNA_RNApol_7kD	RNA_pol_Rpb2_1	P40422	P08518	L	B
PF04998	PF04567	RNA_pol_Rpb1_5	RNA_pol_Rpb2_5	P08518	P04050	B	A
PF05000	PF04567	RNA_pol_Rpb1_4	RNA_pol_Rpb2_5	P08518	P04050	B	A
PF04997	PF00562	RNA_pol_Rpb1_1	RNA_pol_Rpb2_6	P04050	P08518	A	B
PF04997	PF04560	RNA_pol_Rpb1_1	RNA_pol_Rpb2_7	P04050	P08518	A	B
PF01000	PF00562	RNA_pol_A_bac	RNA_pol_Rpb2_6	P16370	P08518	C	B
PF01000	PF01194	RNA_pol_A_bac	RNA_pol_N	P16370	P22139	C	J
PF01000	PF01193	RNA_pol_A_bac	RNA_pol_L	P16370	P38902	C	K
PF04998	PF01192	RNA_pol_Rpb1_5	RNA_pol_Rpb6	P20435	P04050	F	A
PF00623	PF01192	RNA_pol_Rpb1_2	RNA_pol_Rpb6	P20435	P04050	F	A
PF04560	PF01192	RNA_pol_Rpb2_7	RNA_pol_Rpb6	P20435	P08518	F	B
PF04998	PF00562	RNA_pol_Rpb1_5	RNA_pol_Rpb2_6	P08518	P04050	B	A
PF00623	PF00562	RNA_pol_Rpb1_2	RNA_pol_Rpb2_6	P08518	P04050	B	A
PF01194	PF00562	RNA_pol_N	RNA_pol_Rpb2_6	P08518	P22139	B	J
PF04983	PF00562	RNA_pol_Rpb1_3	RNA_pol_Rpb2_6	P08518	P04050	B	A
PF05000	PF00562	RNA_pol_Rpb1_4	RNA_pol_Rpb2_6	P08518	P04050	B	A
PF02150	PF04566	RNA_POL_M_15KD	RNA_pol_Rpb2_4	P27999	P08518	I	B
PF02150	PF04561	RNA_POL_M_15KD	RNA_pol_Rpb2_2	P27999	P08518	I	B
PF02150	PF04990	RNA_POL_M_15KD	RNA_pol_Rpb1_7	P27999	P04050	I	A
PF04566	PF01096	RNA_pol_Rpb2_4	TFIIS_C	P08518	P27999	B	I
PF05000	PF04566	RNA_pol_Rpb1_4	RNA_pol_Rpb2_4	P08518	P04050	B	A
PF01194	PF04563	RNA_pol_N	RNA_pol_Rpb2_1	P08518	P22139	B	J
PF04998	PF01191	RNA_pol_Rpb1_5	RNA_pol_Rpb5_C	P04050	P20434	A	E
PF04998	PF04565	RNA_pol_Rpb1_5	RNA_pol_Rpb2_3	P04050	P08518	A	B
PF04998	PF04560	RNA_pol_Rpb1_5	RNA_pol_Rpb2_7	P04050	P08518	A	B
PF00623	PF04560	RNA_pol_Rpb1_2	RNA_pol_Rpb2_7	P04050	P08518	A	B
PF01193	PF00623	RNA_pol_L	RNA_pol_Rpb1_2	P04050	P38902	A	K
PF04983	PF03870	RNA_pol_Rpb1_3	RNA_pol_Rpb8	P20436	P04050	H	A
PF05000	PF03870	RNA_pol_Rpb1_4	RNA_pol_Rpb8	P20436	P04050	H	A
PF04990	PF04561	RNA_pol_Rpb1_7	RNA_pol_Rpb2_2	P08518	P04050	B	A
PF04561	PF01096	RNA_pol_Rpb2_2	TFIIS_C	P08518	P27999	B	I
PF05000	PF04561	RNA_pol_Rpb1_4	RNA_pol_Rpb2_2	P08518	P04050	B	A
PF05000	PF04565	RNA_pol_Rpb1_4	RNA_pol_Rpb2_3	P08518	P04050	B	A
PF04983	PF04560	RNA_pol_Rpb1_3	RNA_pol_Rpb2_7	P04050	P08518	A	B
PF05000	PF01096	RNA_pol_Rpb1_4	TFIIS_C	P27999	P04050	I	A
PF02239	PF02239	Cytochrom_D1	Cytochrom_D1	P24474	P24474	A	B
PF00842	PF01168	Ala_racemase_C	Ala_racemase_N	P10724	P10724	A	B
PF00842	PF00842	Ala_racemase_C	Ala_racemase_C	P10724	P10724	A	B
PF01168	PF01168	Ala_racemase_N	Ala_racemase_N	P10724	P10724	A	B
PF00036	PF00036	efhand	efhand	P62161	P62161	C	G
PF00587	PF00587	tRNA-synt_2b	tRNA-synt_2b	Q58635	Q58635	D	C
PF03129	PF00587	HGTP_anticodon	tRNA-synt_2b	Q58635	Q58635	A	C
PF00004	PF00004	AAA	AAA	P06710	P06710	B	A
PF00238	PF00297	Ribosomal_L14	Ribosomal_L3	P20279	P22450	D	L
PF00572	PF00297	Ribosomal_L13	Ribosomal_L3	P20279	P29198	D	K
PF01246	PF00297	Ribosomal_L24e	Ribosomal_L3	P20279	P14116	D	V
PF00238	PF01246	Ribosomal_L14	Ribosomal_L24e	P22450	P14116	L	V
PF01907	PF00832	Ribosomal_L37e	Ribosomal_L39	P22452	P32410	3	2
PF00276	PF00832	Ribosomal_L23	Ribosomal_L39	P22452	P12732	3	T
PF00861	PF01157	Ribosomal_L18p	Ribosomal_L21e	P14123	P12734	O	R
PF00861	PF00673	Ribosomal_L18p	Ribosomal_L5_C	P14123	P14124	O	F
PF03947	PF01780	Ribosomal_L2_C	Ribosomal_L37ae	P20276	P60619	C	1
PF00181	PF01780	Ribosomal_L2	Ribosomal_L37ae	P60619	P20276	1	C
PF00827	PF00935	Ribosomal_L15e	Ribosomal_L44	P32411	P60618	4	N
PF01907	PF00573	Ribosomal_L37e	Ribosomal_L4	P32410	P12735	2	E
PF00276	PF00831	Ribosomal_L23	Ribosomal_L29	P10971	P12732	W	T
PF00827	PF01248	Ribosomal_L15e	Ribosomal_L7Ae	P12743	P60618	H	N
PF02784	PF00278	Orn_Arg_deC_N	Orn_DAP_Arg_deC	Q9TZZ6	Q9TZZ6	D	C
PF00278	PF00278	Orn_DAP_Arg_deC	Orn_DAP_Arg_deC	Q9TZZ6	Q9TZZ6	C	D
PF03061	PF03061	4HBT	4HBT	P77712	P77712	A	C
PF00551	PF00551	Formyl_trans_N	Formyl_trans_N	P22102	P22102	B	A
PF00051	PF00024	Kringle	PAN_1	P14210	P14210	A	B
PF00051	PF00051	Kringle	Kringle	P14210	P14210	A	B
PF00024	PF00024	PAN_1	PAN_1	P14210	P14210	A	B
PF00903	PF00903	Glyoxalase	Glyoxalase	Q9I4K6	Q9I4K6	B	A
PF01239	PF00432	PPTA	Prenyltrans	Q02293	Q04631	B	A
PF02803	PF00108	Thiolase_C	Thiolase_N	P07097	P07097	D	C
PF00108	PF00108	Thiolase_N	Thiolase_N	P07097	P07097	D	C
PF00010	PF02344	HLH	Myc-LZ	P61244	P01106	B	D
PF00010	PF00010	HLH	HLH	P61244	P01106	B	A
PF02344	PF02344	Myc-LZ	Myc-LZ	P01106	P01106	D	A
PF01557	PF01557	FAA_hydrolase	FAA_hydrolase	P53889	P53889	B	F
PF00238	PF01245	Ribosomal_L14	Ribosomal_L19	Q9RXJ2	Q9RWB4	I	N
PF01196	PF01783	Ribosomal_L17	Ribosomal_L32p	Q9RSJ5	P49228	L	Z
PF01305	PF01632	Ribosomal_L15	Ribosomal_L35p	Q9RSK9	Q9RSW6	J	3
PF00556	PF00556	LHC	LHC	P26789	P26790	E	F
PF00112	PF00112	Peptidase_C1	Peptidase_C1	P43235	P43235	B	A
PF03033	PF03033	Glyco_transf_28	Glyco_transf_28	P17443	P17443	A	B
PF03066	PF03066	Nucleoplasmin	Nucleoplasmin	Q27415	Q27415	C	E
PF01620	PF01620	Pollen_allerg_2	Pollen_allerg_2	P43215	P43215	L	F
PF00437	PF00437	GSPII_E	GSPII_E	Q7BK04	Q7BK04	B	A
PF08534	PF08534	Redoxin	Redoxin	P44758	P44758	A	B
PF05222	PF02233	AlaDh_PNT_N	PNTB	Q60164	Q59765	B	C
PF01262	PF05222	AlaDh_PNT_C	AlaDh_PNT_N	Q60164	Q60164	B	A
PF01262	PF02233	AlaDh_PNT_C	PNTB	Q59765	Q60164	C	A
PF01262	PF01262	AlaDh_PNT_C	AlaDh_PNT_C	Q60164	Q60164	A	B
PF00656	PF00656	Peptidase_C14	Peptidase_C14	P42574	P42574	B	A
PF00160	PF00160	Pro_isomerase	Pro_isomerase	P62937	P62937	B	A
PF00062	PF00062	Lys	Lys	P29752	P29752	A	C
PF01784	PF01784	NIF3	NIF3	P75743	P75743	E	F
PF02799	PF02799	NMT_C	NMT_C	P30418	P30418	C	B
PF01233	PF02799	NMT	NMT_C	P30418	P30418	C	B
PF01233	PF01233	NMT	NMT	P30418	P30418	C	B
PF01547	PF01547	SBP_bac_1	SBP_bac_1	P02928	P02928	A	C
PF01248	PF01547	Ribosomal_L7Ae	SBP_bac_1	P02928	P14120	A	B
PF02502	PF02502	LacAB_rpiB	LacAB_rpiB	P37351	P37351	A	C
PF02226	PF00073	Pico_P1A	Rhv	P03300	P03300	2	4
PF00073	PF00073	Rhv	Rhv	P03300	P03300	2	3
PF08205	PF07686	C2-set_2	V-set	P15151	P15151	S	R
PF08205	PF08205	C2-set_2	C2-set_2	P15151	P15151	S	R
PF07686	PF07686	V-set	V-set	P15151	P15151	S	R
PF00073	PF07686	Rhv	V-set	P15151	P03300	S	1
PF00047	PF00047	ig	ig	P15151	P15151	R	T
PF01624	PF01624	MutS_I	MutS_I	Q56215	Q56215	A	B
PF05192	PF00488	MutS_III	MutS_V	Q56215	Q56215	B	A
PF00488	PF00488	MutS_V	MutS_V	Q56215	Q56215	B	A
PF05190	PF05190	MutS_IV	MutS_IV	Q56215	Q56215	B	A
PF00060	PF00060	Lig_chan	Lig_chan	P19491	P19491	B	A
PF00301	PF02915	Rubredoxin	Rubrerythrin	Q9UWP7	Q9UWP7	A	B
PF02915	PF02915	Rubrerythrin	Rubrerythrin	Q9UWP7	Q9UWP7	A	B
PF00710	PF00710	Asparaginase	Asparaginase	P00805	P00805	B	A
PF01909	PF01909	NTP_transf_2	NTP_transf_2	P43933	P43933	B	A
PF03122	PF03122	Herpes_MCP	Herpes_MCP	P06491	P06491	B	A
PF00728	PF02838	Glyco_hydro_20	Glyco_hydro_20b	P07686	P07686	A	B
PF02087	PF02087	Nitrophorin	Nitrophorin	Q26239	Q26239	B	A
PF00043	PF02798	GST_C	GST_N	P09211	P09211	A	B
PF02798	PF02798	GST_N	GST_N	P09211	P09211	A	B
PF00043	PF00043	GST_C	GST_C	P04905	P04905	A	B
PF00541	PF00541	Adeno_knob	Adeno_knob	P36711	P36711	B	A
PF00302	PF02898	CAT	NO_synthase	P62577	P29477	B	A
PF02898	PF02898	NO_synthase	NO_synthase	P29477	P29477	B	A
PF00343	PF00343	Phosphorylase	Phosphorylase	P00489	P00489	C	D
PF00156	PF00156	Pribosyltran	Pribosyltran	P41007	P41007	C	D
PF06087	PF06087	Tyr-DNA_phospho	Tyr-DNA_phospho	Q9NUW8	Q9NUW8	B	A
PF01829	PF01829	Peptidase_A6	Peptidase_A6	P12871	P12871	B	D
PF03104	PF03104	DNA_pol_B_exo	DNA_pol_B_exo	P04415	P04415	B	A
PF00232	PF00232	Glyco_hydro_1	Glyco_hydro_1	Q9L794	Q9L794	A	B
PF01450	PF07991	IlvC	IlvN	Q9HVA2	Q9HVA2	C	D
PF01450	PF01450	IlvC	IlvC	Q9HVA2	Q9HVA2	C	B
PF03205	PF03205	MobB	MobB	P32125	P32125	B	A
PF00089	PF00089	Trypsin	Trypsin	Q61955	Q61955	B	A
PF00184	PF00184	Hormone_5	Hormone_5	P01180	P01180	C	A
PF00467	PF02357	KOW	NusG	O67757	O67757	B	A
PF00467	PF00467	KOW	KOW	O67757	O67757	A	B
PF02357	PF02357	NusG	NusG	O67757	O67757	A	C
PF02800	PF00044	Gp_dh_C	Gp_dh_N	P00362	P00362	R	O
PF02800	PF02800	Gp_dh_C	Gp_dh_C	P00362	P00362	R	Q
PF08501	PF08501	Shikimate_dh_N	Shikimate_dh_N	P44774	P44774	C	A
PF01488	PF01488	Shikimate_DH	Shikimate_DH	P44774	P44774	A	D
PF01042	PF01042	Ribonuc_L-PSP	Ribonuc_L-PSP	P80601	P80601	B	D
PF00044	PF00044	Gp_dh_N	Gp_dh_N	P00362	P00362	Q	C
PF00079	PF00079	Serpin	Serpin	P01008	P01008	L	I
PF04151	PF04151	PPC	PPC	Q9S0X0	Q9S0X0	B	A
PF00208	PF02812	ELFV_dehydrog	ELFV_dehydrog_N	P00367	P00367	D	C
PF00208	PF00208	ELFV_dehydrog	ELFV_dehydrog	P00367	P00367	D	C
PF02812	PF02812	ELFV_dehydrog_N	ELFV_dehydrog_N	P00367	P00367	B	E
PF01761	PF01761	DHQ_synthase	DHQ_synthase	P07547	P07547	B	A
PF00008	PF01030	EGF	Recep_L_domain	P01133	P00533	B	A
PF01382	PF01382	Avidin	Avidin	P22629	P22629	B	A
PF00885	PF00885	DMRL_synthase	DMRL_synthase	O66529	O66529	E	A
PF00713	PF00089	Hirudin	Trypsin	P09945	P00734	I	H
PF00017	PF00017	SH2	SH2	Q13322	Q13322	B	A
PF03830	PF03830	PTSIIB_sorb	PTSIIB_sorb	P37081	P37081	B	A
PF01263	PF01263	Aldose_epim	Aldose_epim	Q9ZB17	Q9ZB17	B	A
PF02907	PF02907	Peptidase_S29	Peptidase_S29	P26663	P26663	B	A
PF01006	PF02907	HCV_NS4a	Peptidase_S29	P26663	P29846	B	D
PF00064	PF00064	Neur	Neur	P27907	P27907	B	A
PF00431	PF07645	CUB	EGF_CA	Q9JJS8	Q9JJS8	A	G
PF07645	PF07645	EGF_CA	EGF_CA	Q9JJS8	Q9JJS8	A	G
PF01269	PF01798	Fibrillarin	Nop	O28191	O28192	B	A
PF08240	PF00107	ADH_N	ADH_zinc_N	O57380	O57380	A	B
PF00107	PF00107	ADH_zinc_N	ADH_zinc_N	O57380	O57380	A	B
PF01070	PF01070	FMN_dh	FMN_dh	P50740	P50740	B	A
PF03974	PF00089	Ecotin	Trypsin	P00742	P23827	H	E
PF00067	PF00067	p450	p450	P14779	P14779	B	A
PF03919	PF01331	mRNA_cap_C	mRNA_cap_enzyme	P78587	P78587	A	B
PF01331	PF01331	mRNA_cap_enzyme	mRNA_cap_enzyme	P78587	P78587	A	B
PF00646	PF01466	F-box	Skp1	Q9Y297	P63208	A	B
PF02792	PF00076	Mago_nashi	RRM_1	Q9Y5S9	P61326	B	A
PF02792	PF02792	Mago_nashi	Mago_nashi	P61326	P61326	A	C
PF01395	PF01395	PBP_GOBP	PBP_GOBP	Q8MTC1	Q8MTC1	B	A
PF00085	PF00085	Thioredoxin	Thioredoxin	P80579	P80579	D	B
PF02540	PF02540	NAD_synthase	NAD_synthase	P08164	P08164	B	A
PF01588	PF01588	tRNA_bind	tRNA_bind	P54577	P54577	B	A
PF00033	PF02271	Cytochrom_B_N	UCR_14kD	P00157	P00129	C	F
PF00033	PF02939	Cytochrom_B_N	UcrQ	P00157	P13271	C	G
PF00033	PF02167	Cytochrom_B_N	Cytochrom_C1	P00157	P00125	C	D
PF00033	PF02921	Cytochrom_B_N	UCR_TM	P00157	P13272	C	E
PF00675	PF05193	Peptidase_M16	Peptidase_M16_C	P31800	P23004	A	B
PF05193	PF02939	Peptidase_M16_C	UcrQ	P31800	P13271	A	G
PF05193	PF02921	Peptidase_M16_C	UCR_TM	P31800	P13272	A	E
PF02320	PF02939	UCR_hinge	UcrQ	P00126	P13271	H	G
PF02167	PF02320	Cytochrom_C1	UCR_hinge	P00126	P00125	H	D
PF00032	PF02271	Cytochrom_B_C	UCR_14kD	P00157	P00129	C	F
PF00032	PF02939	Cytochrom_B_C	UcrQ	P00157	P13271	C	G
PF00032	PF02167	Cytochrom_B_C	Cytochrom_C1	P00157	P00125	C	D
PF00675	PF02939	Peptidase_M16	UcrQ	P31800	P13271	A	G
PF00675	PF02921	Peptidase_M16	UCR_TM	P31800	P13272	A	E
PF02167	PF05365	Cytochrom_C1	UCR_UQCRX_QCR9	P00130	P00125	J	D
PF02921	PF05365	UCR_TM	UCR_UQCRX_QCR9	P00130	P13272	J	E
PF02271	PF02939	UCR_14kD	UcrQ	P00129	P13271	F	G
PF02167	PF02271	Cytochrom_C1	UCR_14kD	P00129	P00125	F	D
PF02167	PF02939	Cytochrom_C1	UcrQ	P13271	P00125	G	D
PF02921	PF02939	UCR_TM	UcrQ	P13271	P13272	G	E
PF02167	PF02921	Cytochrom_C1	UCR_TM	P00125	P13272	D	E
PF08240	PF08240	ADH_N	ADH_N	P39462	P39462	C	A
PF07858	PF07858	LEH	LEH	Q9ZAG3	Q9ZAG3	B	A
PF00076	PF00076	RRM_1	RRM_1	P09012	P09012	B	A
PF00930	PF00326	DPPIV_N	Peptidase_S9	P27487	P27487	B	A
PF00930	PF00930	DPPIV_N	DPPIV_N	P27487	P27487	B	A
PF00326	PF00326	Peptidase_S9	Peptidase_S9	P27487	P27487	A	B
PF01658	PF07994	Inos-1-P_synth	NAD_binding_5	P11986	P11986	B	A
PF01658	PF01658	Inos-1-P_synth	Inos-1-P_synth	P11986	P11986	B	A
PF07994	PF07994	NAD_binding_5	NAD_binding_5	P11986	P11986	A	B
PF01187	PF01187	MIF	MIF	P14174	P14174	A	B
PF07654	PF00059	C1-set	Lectin_C	Q64329	P01901	D	A
PF00059	PF00129	Lectin_C	MHC_I	Q64329	P01901	D	A
PF00129	PF00079	MHC_I	Serpin	P01012	P01901	P	A
PF07654	PF00129	C1-set	MHC_I	P01887	P01901	B	A
PF00014	PF00089	Kunitz_BPTI	Trypsin	P00974	P00760	I	A
PF00014	PF00014	Kunitz_BPTI	Kunitz_BPTI	P00974	P00974	D	B
PF02330	PF02330	MAM33	MAM33	Q07021	Q07021	C	B
PF02331	PF02331	P35	P35	P08160	P08160	C	B
PF03331	PF03331	LpxC	LpxC	O67648	O67648	B	A
PF00113	PF03952	Enolase_C	Enolase_N	P00924	P00924	B	A
PF00113	PF00113	Enolase_C	Enolase_C	P00924	P00924	A	B
PF00050	PF00050	Kazal_1	Kazal_1	P09486	P09486	B	A
PF00927	PF00927	Transglut_C	Transglut_C	Q08188	Q08188	A	B
PF00927	PF00868	Transglut_C	Transglut_N	Q08188	Q08188	A	B
PF00167	PF00047	FGF	ig	P21802	O15520	B	A
PF01467	PF01467	CTP_transf_2	CTP_transf_2	Q96T66	Q96T66	B	A
PF00316	PF00316	FBPase	FBPase	P00636	P00636	A	B
PF02391	PF02391	MoaE	MoaE	P30749	P30749	C	A
PF01633	PF01633	Choline_kinase	Choline_kinase	Q22942	Q22942	B	A
PF01048	PF01048	PNP_UDP_1	PNP_UDP_1	Q8I3X4	Q8I3X4	C	E
PF00653	PF00656	BIR	Peptidase_C14	P55211	P98170	B	A
PF00166	PF00166	Cpn10	Cpn10	P09621	P09621	E	M
PF02845	PF02845	CUE	CUE	P54787	P54787	R	Q
PF02845	PF00240	CUE	ubiquitin	P54787	P62990	R	V
PF00240	PF00240	ubiquitin	ubiquitin	P62990	P62990	U	V
PF00640	PF00640	PID	PID	P98078	P98078	C	B
PF00096	PF00096	zf-C2H2	zf-C2H2	P08046	P08046	B	A
PF05202	PF05202	Flp_C	Flp_C	P03870	P03870	D	A
PF05202	PF03930	Flp_C	Flp_N	P03870	P03870	D	A
PF03930	PF03930	Flp_N	Flp_N	P03870	P03870	B	C
PF01112	PF01112	Asparaginase_2	Asparaginase_2	Q47898	Q47898	C	A
PF00216	PF00216	Bac_DNA_binding	Bac_DNA_binding	P05514	P05514	D	C
PF00491	PF00491	Arginase	Arginase	P53608	P53608	C	A
PF07836	PF00682	DmpG_comm	HMGL-like	P51016	P51016	G	E
PF00682	PF00682	HMGL-like	HMGL-like	P51016	P51016	C	A
PF03153	PF02268	TFIIA	TFIIA_gamma_N	P52655	P52657	B	D
PF03153	PF02751	TFIIA	TFIIA_gamma_C	P52655	P52657	B	D
PF03153	PF03153	TFIIA	TFIIA	P52655	P52655	B	C
PF00352	PF02751	TBP	TFIIA_gamma_C	P52657	P20226	D	A
PF00352	PF03153	TBP	TFIIA	P20226	P52655	A	C
PF00071	PF00617	Ras	RasGEF	P01112	Q07889	Q	S
PF00071	PF00618	Ras	RasGEF_N	P01112	Q07889	Q	S
PF01118	PF02774	Semialdhyde_dh	Semialdhyde_dhC	P44801	P44801	B	A
PF02774	PF02774	Semialdhyde_dhC	Semialdhyde_dhC	P44801	P44801	A	B
PF00127	PF00127	Copper-bind	Copper-bind	P34097	P34097	B	A
PF07716	PF07716	bZIP_2	bZIP_2	P05554	P05554	C	A
PF00704	PF00704	Glyco_hydro_18	Glyco_hydro_18	P36222	P36222	C	D
PF00748	PF00036	Calpain_inhib	efhand	P04574	P49342	B	D
PF02668	PF02668	TauD	TauD	Q9XB59	Q9XB59	B	C
PF08530	PF02129	PepX_C	Peptidase_S15	Q8VRK8	Q8VRK8	C	D
PF08530	PF08530	PepX_C	PepX_C	Q8VRK8	Q8VRK8	C	B
PF02129	PF02129	Peptidase_S15	Peptidase_S15	Q8VRK8	Q8VRK8	D	B
PF00072	PF00158	Response_reg	Sigma54_activat	O67198	O67198	B	A
PF00072	PF00072	Response_reg	Response_reg	O67198	O67198	B	A
PF00158	PF00158	Sigma54_activat	Sigma54_activat	O67198	O67198	A	B
PF07714	PF07714	Pkinase_Tyr	Pkinase_Tyr	P08069	P08069	B	A
PF01808	PF02142	AICARFT_IMPCHas	MGS	P31939	P31939	B	A
PF02142	PF02142	MGS	MGS	P31939	P31939	B	A
PF01808	PF01808	AICARFT_IMPCHas	AICARFT_IMPCHas	P31939	P31939	A	B
PF00959	PF00959	Phage_lysozyme	Phage_lysozyme	P00720	P00720	B	A
PF02984	PF00069	Cyclin_C	Pkinase	P20248	P24941	B	A
PF00134	PF00069	Cyclin_N	Pkinase	P20248	P24941	D	C
PF02515	PF02515	CoA_transf_3	CoA_transf_3	O06644	O06644	B	A
PF00254	PF00515	FKBP_C	TPR_1	Q02790	Q02790	A	B
PF00515	PF00515	TPR_1	TPR_1	Q02790	Q02790	A	C
PF02174	PF02174	IRS	IRS	P97465	P97465	B	A
PF01712	PF01712	dNK	dNK	P27707	P27707	B	A
PF00167	PF00167	FGF	FGF	P05230	P05230	B	A
PF01481	PF01481	Arteri_nucleo	Arteri_nucleo	Q9YJI1	Q9YJI1	B	A
PF00541	PF07686	Adeno_knob	V-set	P78310	P36711	B	A
PF00693	PF00693	Herpes_TK	Herpes_TK	P24425	P24425	B	A
PF00337	PF00337	Gal-bind_lectin	Gal-bind_lectin	P47929	P47929	B	A
PF01305	PF00573	Ribosomal_L15	Ribosomal_L4	Q9RSK9	Q9RXK1	J	C
PF00285	PF00285	Citrate_synt	Citrate_synt	P00891	P00891	B	A
PF00069	PF00069	Pkinase	Pkinase	P49137	P49137	A	C
PF00908	PF00908	dTDP_sugar_isom	dTDP_sugar_isom	Q8GIQ0	Q8GIQ0	B	A
PF02615	PF02615	Ldh_2	Ldh_2	P37672	P37672	B	A
PF04452	PF04452	DUF558	DUF558	P44627	P44627	B	A
PF02247	PF02248	Como_LCP	Como_SCP	P03599	P03599	1	2
PF02566	PF02566	OsmC	OsmC	P23929	P23929	E	F
PF00825	PF00825	Ribonuclease_P	Ribonuclease_P	Q9X1H4	Q9X1H4	A	C
PF00383	PF00383	dCMP_cyt_deam_1	dCMP_cyt_deam_1	Q12178	Q12178	B	A
PF07885	PF07885	Ion_trans_2	Ion_trans_2	P83698	P83698	B	A
PF00589	PF00589	Phage_integrase	Phage_integrase	P03700	P03700	A	B
PF02777	PF00081	Sod_Fe_C	Sod_Fe_N	O93724	O93724	P	M
PF00081	PF00081	Sod_Fe_N	Sod_Fe_N	O93724	O93724	P	O
PF02777	PF02777	Sod_Fe_C	Sod_Fe_C	O93724	O93724	X	V
PF00554	PF00554	RHD	RHD	Q13469	Q13469	O	N
PF01833	PF01833	TIG	TIG	Q13469	Q13469	N	O
PF07654	PF00047	C1-set	ig	P01892	Q8NHL6	A	D
PF00199	PF06628	Catalase	Catalase-rel	P21179	P21179	D	C
PF00199	PF00199	Catalase	Catalase	P21179	P21179	D	C
PF05193	PF02271	Peptidase_M16_C	UCR_14kD	P07256	P00128	A	G
PF01488	PF08501	Shikimate_DH	Shikimate_dh_N	P15770	P15770	C	A
PF00431	PF00008	CUB	EGF	P09871	P09871	B	A
PF00008	PF00008	EGF	EGF	P09871	P09871	A	B
PF00171	PF00171	Aldedh	Aldedh	P05091	P05091	C	A
PF01274	PF01274	Malate_synthase	Malate_synthase	P37330	P37330	B	A
PF02627	PF02627	CMD	CMD	Q9X1V5	Q9X1V5	B	D
PF00082	PF00082	Peptidase_S8	Peptidase_S8	P23188	P23188	C	D
PF01483	PF00082	P_proprotein	Peptidase_S8	P23188	P23188	C	D
PF01483	PF01483	P_proprotein	P_proprotein	P23188	P23188	G	E
PF00560	PF00089	LRR_1	Trypsin	P07359	P00734	A	C
PF00626	PF00626	Gelsolin	Gelsolin	P06396	P06396	A	C
PF00104	PF00104	Hormone_recep	Hormone_recep	P04150	P04150	C	B
PF05173	PF05173	DapB_C	DapB_C	P72024	P72024	A	B
PF00489	PF00041	IL6	fn3	P40189	P05231	A	B
PF04127	PF04127	DFP	DFP	Q9HAB8	Q9HAB8	B	A
PF05409	PF05409	Peptidase_C30	Peptidase_C30	Q05002	Q05002	B	A
PF00699	PF00547	Urease_beta	Urease_gamma	P18315	P18316	B	A
PF00449	PF00699	Urease_alpha	Urease_beta	P18315	P18314	B	C
PF01670	PF01670	Glyco_hydro_12	Glyco_hydro_12	O00095	O00095	D	C
PF08517	PF08517	AXH	AXH	P54253	P54253	C	D
PF00793	PF00793	DAHP_synth_1	DAHP_synth_1	P32449	P32449	B	A
PF01179	PF02728	Cu_amine_oxid	Cu_amine_oxidN3	P46883	P46883	A	B
PF01179	PF01179	Cu_amine_oxid	Cu_amine_oxid	P46883	P46883	B	A
PF07833	PF07833	Cu_amine_oxidN1	Cu_amine_oxidN1	P46883	P46883	A	B
PF01261	PF01261	AP_endonuc_2	AP_endonuc_2	P24300	P24300	B	A
PF02335	PF02335	Cytochrom_C552	Cytochrom_C552	Q8VNU2	Q8VNU2	B	A
PF02832	PF00869	Flavi_glycop_C	Flavi_glycoprot	P12823	P12823	B	A
PF00869	PF00869	Flavi_glycoprot	Flavi_glycoprot	P12823	P12823	B	A
PF03063	PF03063	Prismane	Prismane	P27989	P27989	B	A
PF00202	PF00202	Aminotran_3	Aminotran_3	P04181	P04181	B	C
PF01870	PF01870	Hjc	Hjc	Q97YX6	Q97YX6	B	A
PF02056	PF02056	Glyco_hydro_4	Glyco_hydro_4	O33830	O33830	B	A
PF01425	PF01425	Amidase	Amidase	Q9ZIV5	Q9ZIV5	B	A
PF00061	PF00061	Lipocalin	Lipocalin	P07435	P07435	B	A
PF00595	PF00595	PDZ	PDZ	O00560	O00560	B	A
PF00079	PF01033	Serpin	Somatomedin_B	P04004	P05121	B	A
PF01370	PF01370	Epimerase	Epimerase	Q8GIP9	Q8GIP9	B	A
PF00056	PF00056	Ldh_1_N	Ldh_1_N	Q7SI97	Q7SI97	B	A
PF02866	PF02866	Ldh_1_C	Ldh_1_C	Q7SI97	Q7SI97	A	B
PF02935	PF02285	COX7C	COX8	P10175	P00430	M	L
PF00115	PF02285	COX1	COX8	P10175	P00396	M	A
PF02936	PF02285	COX4	COX8	P10175	P00423	M	D
PF02790	PF02284	COX2_TM	COX5A	P68530	P00426	B	E
PF02790	PF02937	COX2_TM	COX6C	P68530	P04038	B	I
PF02790	PF02046	COX2_TM	COX6A	P68530	P07471	B	T
PF00115	PF02790	COX1	COX2_TM	P68530	P00396	B	A
PF02790	PF02936	COX2_TM	COX4	P68530	P00423	B	D
PF02790	PF05392	COX2_TM	COX7B	P68530	P13183	B	K
PF02284	PF02937	COX5A	COX6C	P00426	P04038	E	I
PF02284	PF01215	COX5A	COX5B	P00426	P00428	E	F
PF02936	PF02284	COX4	COX5A	P00426	P00423	E	D
PF00116	PF02937	COX2	COX6C	P04038	P68530	I	B
PF00115	PF02937	COX1	COX6C	P04038	P00396	I	A
PF02936	PF02937	COX4	COX6C	P04038	P00423	I	D
PF02937	PF05392	COX6C	COX7B	P04038	P13183	I	K
PF00116	PF02297	COX2	COX6B	P68530	P00429	O	U
PF00115	PF00116	COX1	COX2	P68530	P00396	O	N
PF00116	PF05392	COX2	COX7B	P68530	P13183	O	X
PF00116	PF02936	COX2	COX4	P68530	P00423	O	Q
PF01215	PF01215	COX5B	COX5B	P00428	P00428	F	S
PF01215	PF02046	COX5B	COX6A	P00428	P07471	F	G
PF00510	PF01215	COX3	COX5B	P00428	P00415	F	C
PF00115	PF01215	COX1	COX5B	P00428	P00396	F	A
PF01215	PF02238	COX5B	COX7a	P00428	P07470	F	J
PF02936	PF01215	COX4	COX5B	P00428	P00423	F	D
PF02935	PF02238	COX7C	COX7a	P07470	P00430	W	Y
PF00510	PF02238	COX3	COX7a	P07470	P00415	W	P
PF00115	PF02238	COX1	COX7a	P07470	P00396	W	N
PF02046	PF02297	COX6A	COX6B	P00429	P07471	H	G
PF02297	PF02297	COX6B	COX6B	P00429	P00429	H	U
PF00510	PF02297	COX3	COX6B	P00429	P00415	H	C
PF00115	PF02297	COX1	COX6B	P00429	P00396	H	A
PF00510	PF02935	COX3	COX7C	P00430	P00415	L	C
PF00115	PF02935	COX1	COX7C	P00430	P00396	L	A
PF00510	PF02046	COX3	COX6A	P07471	P00415	G	C
PF00115	PF02046	COX1	COX6A	P07471	P00396	G	A
PF00115	PF00510	COX1	COX3	P00415	P00396	C	A
PF00115	PF02936	COX1	COX4	P00396	P00423	A	D
PF00115	PF05392	COX1	COX7B	P00396	P13183	A	K
PF02936	PF05392	COX4	COX7B	P00423	P13183	D	K
PF01039	PF01039	Carboxyl_trans	Carboxyl_trans	Q00955	Q00955	A	B
PF00190	PF00190	Cupin_1	Cupin_1	P93708	P93708	B	A
PF02710	PF02710	Hema_HEFG	Hema_HEFG	P07975	P07975	E	C
PF00089	PF00095	Trypsin	WAP	P19957	P00772	I	E
PF01243	PF01243	Pyridox_oxidase	Pyridox_oxidase	Q46604	Q46604	A	B
PF00341	PF00341	PDGF	PDGF	P15692	P15692	W	V
PF00685	PF00685	Sulfotransfer_1	Sulfotransfer_1	Q26490	Q26490	A	B
PF02827	PF00433	PKI	Pkinase_C	P61926	P05132	I	E
PF02827	PF00069	PKI	Pkinase	P61926	P05132	I	E
PF02911	PF00551	Formyl_trans_C	Formyl_trans_N	P23882	P23882	B	A
PF00979	PF00979	Reovirus_cap	Reovirus_cap	Q98639	Q98639	A	B
PF07654	PF00042	C1-set	Globin	P02089	P04224	B	A
PF00042	PF00993	Globin	MHC_II_alpha	P02089	P04224	B	C
PF05239	PF00124	PRC	Photo_RC	P02953	P11846	M	H
PF00124	PF00124	Photo_RC	Photo_RC	P02953	P02954	M	L
PF03967	PF00124	PRCH	Photo_RC	P02953	P11846	M	H
PF02876	PF01123	Stap_Strp_tox_C	Stap_Strp_toxin	P62560	P62560	D	C
PF01315	PF02738	Ald_Xan_dh_C	Ald_Xan_dh_C2	P80457	P80457	A	B
PF02738	PF02738	Ald_Xan_dh_C2	Ald_Xan_dh_C2	P80457	P80457	A	B
PF02738	PF01799	Ald_Xan_dh_C2	Fer2_2	P80457	P80457	A	B
PF01315	PF00111	Ald_Xan_dh_C	Fer2	P80457	P80457	B	A
PF01315	PF01315	Ald_Xan_dh_C	Ald_Xan_dh_C	P80457	P80457	B	A
PF00795	PF00795	CN_hydrolase	CN_hydrolase	Q44185	Q44185	C	D
PF07221	PF07221	GlcNAc_2-epim	GlcNAc_2-epim	P17560	P17560	A	B
PF00299	PF00089	Squash	Trypsin	P00760	P10293	E	I
PF00022	PF00235	Actin	Profilin	P02584	P60712	P	A
PF00121	PF00121	TIM	TIM	P00943	P00943	B	A
PF00897	PF00897	Orbi_VP7	Orbi_VP7	P18259	P18259	H	S
PF01700	PF00897	Orbi_VP3	Orbi_VP7	P18259	P56582	H	B
PF01700	PF01700	Orbi_VP3	Orbi_VP3	P56582	P56582	A	B
PF00116	PF00510	COX2	COX3	P68530	P00415	B	C
PF00787	PF00787	PX	PX	Q08826	Q08826	B	A
PF02136	PF02136	NTF2	NTF2	P00947	P00947	A	B
PF00132	PF00132	Hexapep	Hexapep	P77791	P77791	A	C
PF01023	PF00036	S_100	efhand	P80511	P80511	D	C
PF01023	PF01023	S_100	S_100	P80511	P80511	D	B
PF07736	PF07736	CM_1	CM_1	Q84FH6	Q84FH6	A	C
PF05448	PF05448	AXE1	AXE1	P94388	P94388	D	E
PF00989	PF00989	PAS	PAS	P16113	P16113	B	A
PF02156	PF02156	Glyco_hydro_26	Glyco_hydro_26	P49424	P49424	B	A
PF03167	PF03167	UDG	UDG	Q9YGN6	Q9YGN6	B	A
PF00612	PF00036	IQ	efhand	Q02440	P14649	A	B
PF00063	PF00036	Myosin_head	efhand	Q02440	P14649	A	B
PF00018	PF00018	SH3_1	SH3_1	O89100	O89100	B	A
PF02932	PF02932	Neur_chan_memb	Neur_chan_memb	Q6S3H8	Q6S3I0	C	B
PF00564	PF00564	PB1	PB1	P19878	Q15080	B	K
PF00248	PF00248	Aldo_ket_red	Aldo_ket_red	P76187	P76187	A	C
PF01493	PF04898	GXGXG	Glu_syn_central	P55038	P55038	B	A
PF02894	PF02894	GFO_IDH_MocA_C	GFO_IDH_MocA_C	Q07982	Q07982	D	C
PF01408	PF01408	GFO_IDH_MocA	GFO_IDH_MocA	Q07982	Q07982	B	C
PF07724	PF00227	AAA_2	Proteasome	P43772	P43773	H	C
PF07724	PF07724	AAA_2	AAA_2	P43773	P43773	C	B
PF07938	PF07938	Fungal_lectin	Fungal_lectin	P18891	P18891	B	A
PF05025	PF05025	RbsD_FucU	RbsD_FucU	P36946	P36946	B	A
PF02839	PF00704	CBM_5_12	Glyco_hydro_18	P11797	P11797	B	A
PF03404	PF00174	Mo-co_dimer	Oxidored_molyb	Q9S850	Q9S850	E	A
PF03404	PF03404	Mo-co_dimer	Mo-co_dimer	Q9S850	Q9S850	E	F
PF00174	PF00174	Oxidored_molyb	Oxidored_molyb	Q9S850	Q9S850	C	D
PF02055	PF02055	Glyco_hydro_30	Glyco_hydro_30	P04062	P04062	B	A
PF01568	PF03892	Molydop_binding	NapB	Q53176	Q53177	G	H
PF00384	PF03892	Molybdopterin	NapB	Q53176	Q53177	O	P
PF03892	PF03892	NapB	NapB	Q53177	Q53177	D	N
PF04879	PF03892	Molybdop_Fe4S4	NapB	Q53177	Q53176	D	G
PF02264	PF02264	LamB	LamB	P22340	P22340	R	Q
PF03566	PF03566	Peptidase_A21	Peptidase_A21	Q90063	Q90063	A	C
PF00006	PF02874	ATP-synt_ab	ATP-synt_ab_N	P19483	P00829	C	F
PF02874	PF02874	ATP-synt_ab_N	ATP-synt_ab_N	P19483	P00829	C	F
PF00006	PF00006	ATP-synt_ab	ATP-synt_ab	P00829	P19483	D	A
PF00006	PF00306	ATP-synt_ab	ATP-synt_ab_C	P00829	P19483	D	A
PF00306	PF00306	ATP-synt_ab_C	ATP-synt_ab_C	P00829	P19483	D	A
PF02180	PF00452	BH4	Bcl-2	P41958	P41958	A	B
PF02180	PF02180	BH4	BH4	P41958	P41958	A	B
PF00963	PF00404	Cohesin	Dockerin_1	P51584	Q06851	B	A
PF01398	PF01398	Mov34	Mov34	O28085	O28085	D	C
PF02733	PF02733	Dak1	Dak1	P76015	P76015	B	A
PF01965	PF01965	DJ-1_PfpI	DJ-1_PfpI	P45470	P45470	B	A
PF02872	PF00149	5_nucleotid_C	Metallophos	P07024	P07024	A	B
PF00465	PF00465	Fe-ADH	Fe-ADH	Q46856	Q46856	A	C
PF01593	PF01593	Amino_oxidase	Amino_oxidase	P27338	P27338	B	A
PF00071	PF00071	Ras	Ras	P62491	P62491	B	A
PF00650	PF00650	CRAL_TRIO	CRAL_TRIO	P49638	P49638	A	B
PF00840	PF00840	Glyco_hydro_7	Glyco_hydro_7	P56680	P56680	B	A
PF00084	PF00084	Sushi	Sushi	P08174	P08174	A	B
PF01791	PF01791	DeoC	DeoC	P58315	P58315	H	I
PF00321	PF00321	Thionin	Thionin	P01538	P01538	B	A
PF00030	PF00030	Crystall	Crystall	P53674	P53674	A	B
PF00814	PF00814	Peptidase_M22	Peptidase_M22	P76256	P76256	B	A
PF00448	PF02881	SRP54	SRP54_N	O07347	P83749	A	D
PF00448	PF00448	SRP54	SRP54	O07347	P83749	A	D
PF02881	PF02881	SRP54_N	SRP54_N	O07347	P83749	A	D
PF07828	PF07828	PA-IL	PA-IL	Q05097	Q05097	B	A
PF03965	PF03965	Pencillinase_R	Pencillinase_R	P68262	P68262	B	A
PF01105	PF01105	EMP24_GP25L	EMP24_GP25L	O76054	O76054	A	C
PF00650	PF01105	CRAL_TRIO	EMP24_GP25L	O76054	O76054	A	E
PF03765	PF01105	CRAL_TRIO_N	EMP24_GP25L	O76054	O76054	C	E
PF02883	PF02883	Alpha_adaptinC2	Alpha_adaptinC2	Q9UJY5	Q9UJY5	B	A
PF00882	PF00882	Zn_dep_PLPC	Zn_dep_PLPC	Q8GCY3	Q8GCY3	B	C
PF00676	PF02779	E1_dh	Transket_pyr	P12694	P21953	A	B
PF01403	PF01403	Sema	Sema	Q92854	Q92854	B	A
PF00144	PF00144	Beta-lactamase	Beta-lactamase	P00807	P00807	A	B
PF02423	PF02423	OCD_Mu_crystall	OCD_Mu_crystall	O28608	O28608	A	B
PF00631	PF00400	G-gamma	WD40	P62871	P63212	B	G
PF00169	PF00400	PH	WD40	P21146	P62871	A	B
PF00583	PF00583	Acetyltransf_1	Acetyltransf_1	O32293	O32293	B	A
PF02742	PF02742	Fe_dep_repr_C	Fe_dep_repr_C	P54512	P54512	B	A
PF00502	PF00502	Phycobilisome	Phycobilisome	Q9AM02	Q71RW8	A	B
PF00161	PF00652	RIP	Ricin_B_lectin	P81830	P81446	B	A
PF01597	PF01597	GCV_H	GCV_H	P83697	P83697	C	B
PF08436	PF08436	DXP_redisom_C	DXP_redisom_C	P45568	P45568	A	B
PF00129	PF00129	MHC_I	MHC_I	P06126	P06126	A	C
PF01979	PF01979	Amidohydro_1	Amidohydro_1	P39377	P39377	B	A
PF00576	PF00576	Transthyretin	Transthyretin	O93330	O93330	B	A
PF00881	PF00881	Nitroreductase	Nitroreductase	P38489	P38489	A	B
PF03405	PF03405	FA_desaturase_2	FA_desaturase_2	P22337	P22337	C	E
PF01144	PF01144	CoA_trans	CoA_trans	Q29551	Q29551	B	A
PF00079	PF00089	Serpin	Trypsin	P01009	P00760	A	B
PF00729	PF00729	Viral_coat	Viral_coat	P04383	P04383	A	C
PF04777	PF04777	Evr1_Alr	Evr1_Alr	Q63042	Q63042	B	D
PF00229	PF00229	TNF	TNF	Q9Y275	Q9Y275	H	C
PF01342	PF01342	SAND	SAND	Q9Y692	Q9Y692	B	A
PF00111	PF00111	Fer2	Fer2	P00259	P00259	B	A
PF00068	PF00068	Phospholip_A2_1	Phospholip_A2_1	Q02471	P31100	D	C
PF00268	PF00268	Ribonuc_red_sm	Ribonuc_red_sm	O69274	O69274	D	C
PF03872	PF08281	RseA_N	Sigma70_r4_2	P34086	P38106	B	F
PF03872	PF03872	RseA_N	RseA_N	P38106	P38106	C	F
PF03872	PF04542	RseA_N	Sigma70_r2	P38106	P34086	C	A
PF04542	PF04542	Sigma70_r2	Sigma70_r2	P34086	P34086	A	B
PF03711	PF03711	OKR_DC_1_C	OKR_DC_1_C	P43099	P43099	B	A
PF01276	PF03711	OKR_DC_1	OKR_DC_1_C	P43099	P43099	B	A
PF01276	PF03709	OKR_DC_1	OKR_DC_1_N	P43099	P43099	A	B
PF01276	PF01276	OKR_DC_1	OKR_DC_1	P43099	P43099	A	B
PF02561	PF02561	FliS	FliS	O67806	O67806	D	B
PF00413	PF00413	Peptidase_M10	Peptidase_M10	P39900	P39900	C	B
PF00049	PF00049	Insulin	Insulin	P01308	P01308	D	B
PF00225	PF00225	Kinesin	Kinesin	P52732	P52732	B	A
PF03459	PF03459	TOBE	TOBE	P68187	P68187	B	A
PF00005	PF03459	ABC_tran	TOBE	P68187	P68187	B	A
PF00005	PF00005	ABC_tran	ABC_tran	P68187	P68187	D	C
PF00037	PF01568	Fer4	Molydop_binding	P11349	P09152	B	A
PF00037	PF00384	Fer4	Molybdopterin	P11349	P09152	B	A
PF01063	PF01063	Aminotran_4	Aminotran_4	P19938	P19938	A	B
PF02729	PF02729	OTCace_N	OTCace_N	P08308	P08308	B	G
PF00185	PF02729	OTCace	OTCace_N	P08308	P08308	B	F
PF00185	PF00185	OTCace	OTCace	P08308	P08308	F	D
PF03473	PF03473	MOSC	MOSC	O32079	O32079	B	A
PF00700	PF02561	Flagellin_C	FliS	O67803	O67806	B	A
PF03091	PF03091	CutA1	CutA1	Q6MGD0	Q6MGD0	A	C
PF00180	PF00180	Iso_dh	Iso_dh	P61495	P61495	B	D
PF00267	PF00267	Porin_1	Porin_1	Q48473	Q48473	B	A
PF00023	PF00023	Ank	Ank	P07207	P07207	B	C
PF07404	PF02765	TEBP_beta	Telo_bind	P29549	P16458	A	B
PF01361	PF01361	Tautomerase	Tautomerase	P49172	P49172	A	F
PF02962	PF02962	CHMI	CHMI	Q05354	Q05354	B	A
PF02570	PF02570	CbiC	CbiC	Q9HKE7	Q9HKE7	B	A
PF04386	PF04386	SspB	SspB	P45206	P45206	B	A
PF00270	PF00270	DEAD	DEAD	P83699	P83699	B	A
PF01264	PF01264	Chorismate_synt	Chorismate_synt	O66493	O66493	B	A
PF00070	PF00070	Pyr_redox	Pyr_redox	P16640	P16640	A	B
PF00070	PF07992	Pyr_redox	Pyr_redox_2	P16640	P16640	A	B
PF07992	PF07992	Pyr_redox_2	Pyr_redox_2	P16640	P16640	A	B
PF00302	PF00302	CAT	CAT	P62577	P62577	G	H
PF00863	PF00863	Peptidase_C4	Peptidase_C4	P04517	P04517	B	A
PF05138	PF05138	PaaA_PaaC	PaaA_PaaC	P76079	P76079	A	B
PF00654	PF00654	Voltage_CLC	Voltage_CLC	P37019	P37019	A	B
PF03070	PF03070	TENA_THI-4	TENA_THI-4	P27505	P27505	A	B
PF04231	PF04231	Endonuclease_1	Endonuclease_1	Q8DCA6	Q8DCA6	A	B
PF07472	PF07472	PA-IIL	PA-IIL	Q9HYN5	Q9HYN5	D	C
PF01419	PF01419	Jacalin	Jacalin	P93114	P93114	D	C
PF00816	PF00816	Histone_HNS	Histone_HNS	Q9KSX6	Q9KSX6	A	B
PF00071	PF00620	Ras	RhoGAP	Q07960	P61586	A	B
PF03623	PF03623	Focal_AT	Focal_AT	Q05397	Q05397	C	B
PF01702	PF01702	TGT	TGT	P28720	P28720	B	A
PF00027	PF00027	cNMP_binding	cNMP_binding	O88703	O88703	A	B
PF00275	PF00275	EPSP_synthase	EPSP_synthase	P33038	P33038	B	X
PF02633	PF02633	Creatininase	Creatininase	P83772	P83772	B	A
PF00378	PF00378	ECH	ECH	O06414	O06414	I	E
PF01180	PF01180	DHO_dh	DHO_dh	P54321	P54321	A	B
PF02775	PF02776	TPP_enzyme_C	TPP_enzyme_N	P23234	P23234	D	C
PF02775	PF02775	TPP_enzyme_C	TPP_enzyme_C	P23234	P23234	D	C
PF00205	PF02776	TPP_enzyme_M	TPP_enzyme_N	P23234	P23234	B	D
PF02776	PF02776	TPP_enzyme_N	TPP_enzyme_N	P23234	P23234	C	D
PF07912	PF07912	ERp29_N	ERp29_N	O44342	O44342	B	A
PF00554	PF01833	RHD	TIG	Q13469	Q13469	Q	N
PF00117	PF00977	GATase	His_biosynth	P33734	P33734	B	A
PF00659	PF00659	POLO_box	POLO_box	P53350	P53350	B	A
PF00653	PF00653	BIR	BIR	Q24306	Q24306	H	I
PF00692	PF00692	dUTPase	dUTPase	P33316	P33316	C	B
PF01036	PF01036	Bac_rhodopsin	Bac_rhodopsin	P02945	P02945	B	A
PF06058	PF06058	DCP1	DCP1	Q12517	Q12517	B	A
PF00725	PF02737	3HCDH	3HCDH_N	Q16836	Q16836	B	A
PF00725	PF00725	3HCDH	3HCDH	Q16836	Q16836	B	A
PF00186	PF00186	DHFR_1	DHFR_1	P00379	P00379	A	B
PF01627	PF00072	Hpt	Response_reg	Q07688	P39928	A	B
PF02801	PF00109	Ketoacyl-synt_C	ketoacyl-synt	Q9FBC2	Q9FBC2	C	D
PF00109	PF00109	ketoacyl-synt	ketoacyl-synt	Q9FBC2	Q9FBC2	D	C
PF01627	PF01627	Hpt	Hpt	Q07688	Q07688	G	A
PF01083	PF01083	Cutinase	Cutinase	P00590	P00590	B	A
PF00023	PF01833	Ank	TIG	Q04207	Q60778	B	D
PF01746	PF01746	tRNA_m1G_MT	tRNA_m1G_MT	O67463	O67463	A	C
PF02820	PF02820	MBT	MBT	Q9Y468	Q9Y468	C	A
PF01346	PF01346	FKBP_N	FKBP_N	P45523	P45523	A	B
PF00215	PF00215	OMPdecase	OMPdecase	P39304	P39304	B	A
PF01575	PF01575	MaoC_dehydratas	MaoC_dehydratas	O28346	O28346	I	J
PF02585	PF02585	PIG-L	PIG-L	O50426	O50426	B	A
PF01391	PF01391	Collagen	Collagen	P02452	P02452	A	C
PF01436	PF01436	NHL	NHL	Q8MQJ9	Q8MQJ9	B	A
PF00742	PF03447	Homoserine_dh	NAD_binding_3	P31116	P31116	A	B
PF00742	PF00742	Homoserine_dh	Homoserine_dh	P31116	P31116	A	B
PF00135	PF00135	COesterase	COesterase	P21836	P21836	B	A
PF00233	PF00233	PDEase_I	PDEase_I	Q08499	Q08499	C	D
PF01138	PF03725	RNase_PH	RNase_PH_C	P28619	P28619	D	C
PF03725	PF03725	RNase_PH_C	RNase_PH_C	P28619	P28619	D	C
PF01138	PF01138	RNase_PH	RNase_PH	P28619	P28619	B	A
PF00082	PF02428	Peptidase_S8	Prot_inhib_II	P05119	P00780	I	B
PF02556	PF02556	SecB	SecB	P44853	P44853	D	F
PF03165	PF03165	MH1	MH1	P84022	P84022	B	A
PF01546	PF01546	Peptidase_M20	Peptidase_M20	Q03154	Q03154	B	D
PF07687	PF01546	M20_dimer	Peptidase_M20	Q03154	Q03154	B	A
PF01981	PF01981	PTH2	PTH2	Q9Y3E5	Q9Y3E5	B	A
PF01156	PF01156	IU_nuc_hydro	IU_nuc_hydro	P33022	P33022	A	C
PF05866	PF05866	RusA	RusA	P40116	P40116	B	A
PF05115	PF08041	PetL	PetM	P50369	Q42496	L	M
PF01333	PF05115	Apocytochr_F_C	PetL	P50369	P23577	L	A
PF00032	PF00033	Cytochrom_B_C	Cytochrom_B_N	P23230	Q00471	D	B
PF00032	PF00355	Cytochrom_B_C	Rieske	P23230	P49728	D	C
PF00032	PF02529	Cytochrom_B_C	PetG	P23230	Q08362	D	G
PF00033	PF00355	Cytochrom_B_N	Rieske	Q00471	P49728	B	C
PF01333	PF00033	Apocytochr_F_C	Cytochrom_B_N	Q00471	P23577	B	A
PF00033	PF02529	Cytochrom_B_N	PetG	Q00471	Q08362	B	G
PF01333	PF08041	Apocytochr_F_C	PetM	Q42496	P23577	M	A
PF02529	PF08041	PetG	PetM	Q42496	Q08362	M	G
PF01333	PF02529	Apocytochr_F_C	PetG	P23577	Q08362	A	G
PF00129	PF00078	MHC_I	RVT_1	P12499	P13746	C	A
PF00545	PF00545	Ribonuclease	Ribonuclease	P00651	P00651	A	C
PF00668	PF00668	Condensation	Condensation	P96208	P96208	B	A
PF00136	PF03104	DNA_pol_B	DNA_pol_B_exo	Q38087	Q38087	D	B
PF02737	PF02737	3HCDH_N	3HCDH_N	P00348	P00348	C	B
PF00034	PF00034	Cytochrom_C	Cytochrom_C	P04164	P04164	A	B
PF00905	PF00905	Transpeptidase	Transpeptidase	P14489	P14489	A	B
PF01494	PF07976	FAD_binding_3	Phe_hydrox_dim	P15245	P15245	C	A
PF07976	PF07976	Phe_hydrox_dim	Phe_hydrox_dim	P15245	P15245	C	D
PF01494	PF01494	FAD_binding_3	FAD_binding_3	P15245	P15245	D	B
PF05352	PF05352	Phage_connector	Phage_connector	P04332	P04332	B	D
PF05706	PF05706	CDKN3	CDKN3	Q16667	Q16667	C	E
PF05706	PF00069	CDKN3	Pkinase	P24941	Q16667	B	A
PF00167	PF07679	FGF	I-set	P11362	P09038	D	B
PF07679	PF07679	I-set	I-set	P11362	P11362	D	C
PF01320	PF01844	Colicin_Pyocin	HNH	P09883	P13479	B	A
PF01819	PF01819	Levi_coat	Levi_coat	P03614	P03614	C	B
PF01466	PF03931	Skp1	Skp1_POZ	P63208	P63208	B	D
PF03931	PF03931	Skp1_POZ	Skp1_POZ	P63208	P63208	B	D
PF00646	PF00646	F-box	F-box	Q13309	Q13309	C	A
PF00560	PF03931	LRR_1	Skp1_POZ	Q13309	P63208	A	D
PF02276	PF00124	CytoC_RC	Photo_RC	P06010	P07173	M	C
PF02276	PF03967	CytoC_RC	PRCH	P07173	P06008	C	H
PF02867	PF02867	Ribonuc_red_lgC	Ribonuc_red_lgC	P00452	P00452	B	A
PF00317	PF00317	Ribonuc_red_lgN	Ribonuc_red_lgN	P00452	P00452	A	C
PF00161	PF00161	RIP	RIP	P10297	P10297	B	A
PF02806	PF02806	Alpha-amylase_C	Alpha-amylase_C	P05618	P05618	B	A
PF00128	PF02806	Alpha-amylase	Alpha-amylase_C	P05618	P05618	B	A
PF03869	PF03869	Arc	Arc	P03050	P03050	C	D
PF02811	PF02811	PHP	PHP	P75914	P75914	B	C
PF08362	PF08362	TetR_C_3	TetR_C_3	P75899	P75899	C	D
PF08362	PF00440	TetR_C_3	TetR_N	P75899	P75899	B	D
PF00228	PF00228	Bowman-Birk_leg	Bowman-Birk_leg	P56679	P56679	B	A
PF00620	PF00620	RhoGAP	RhoGAP	P27986	P27986	B	A
PF05772	PF05772	NinB	NinB	P03765	P03765	B	A
PF00601	PF00601	Flu_NS2	Flu_NS2	Q67248	Q67248	B	A
PF01355	PF01355	HIPIP	HIPIP	P59860	P59860	A	B
PF00509	PF00509	Hemagglutinin	Hemagglutinin	P03437	P03437	B	D
PF02229	PF02229	PC4	PC4	P53999	P53999	C	E
PF08246	PF00112	Inhibitor_I29	Peptidase_C1	P10056	P10056	C	B
PF08246	PF08246	Inhibitor_I29	Inhibitor_I29	P10056	P10056	B	C
PF00314	PF00314	Thaumatin	Thaumatin	P14170	P14170	B	A
PF00352	PF00352	TBP	TBP	P62001	P62001	B	A
PF00341	PF04692	PDGF	PDGF_N	P01127	P01127	B	A
PF00419	PF02753	Fimbrial	Pili_assembly_C	P15319	P62532	A	B
PF00419	PF00345	Fimbrial	Pili_assembly_N	P15319	P62532	A	B
PF05033	PF05033	Pre-SET	Pre-SET	Q8X225	Q8X225	A	B
PF01381	PF01381	HTH_3	HTH_3	P16117	P16117	R	L
PF00664	PF00664	ABC_membrane	ABC_membrane	Q9KQW9	Q9KQW9	D	C
PF00501	PF00501	AMP-binding	AMP-binding	Q8ZKF6	Q8ZKF6	B	A
PF00185	PF02748	OTCace	PyrI_C	Q55338	P74766	A	B
PF02729	PF02748	OTCace_N	PyrI_C	Q55338	P74766	A	B
PF01053	PF01053	Cys_Met_Meta_PP	Cys_Met_Meta_PP	P13254	P13254	A	C
PF02203	PF02203	TarH	TarH	P02941	P02941	B	A
PF00074	PF00074	RnaseA	RnaseA	P61823	P61823	B	A
PF00393	PF03446	6PGD	NAD_binding_2	P31072	P31072	B	A
PF00393	PF00393	6PGD	6PGD	P31072	P31072	A	B
PF00390	PF00390	malic	malic	P23368	P23368	C	D
PF03949	PF00390	Malic_M	malic	P23368	P23368	B	C
PF00016	PF00016	RuBisCO_large	RuBisCO_large	P00875	P00875	E	G
PF00016	PF00101	RuBisCO_large	RuBisCO_small	P00875	P00870	E	J
PF00016	PF02788	RuBisCO_large	RuBisCO_large_N	P00875	P00875	E	C
PF00590	PF00590	TP_methylase	TP_methylase	P25924	P25924	B	A
PF02428	PF02428	Prot_inhib_II	Prot_inhib_II	P05119	P05119	C	A
PF03497	PF03497	Anthrax_toxA	Anthrax_toxA	P40136	P40136	B	C
PF00386	PF00386	C1q	C1q	P02746	P02747	B	C
PF02078	PF02078	Synapsin_N	Synapsin_N	P09951	P09951	C	B
PF02750	PF02078	Synapsin_C	Synapsin_N	P09951	P09951	C	D
PF02750	PF02750	Synapsin_C	Synapsin_C	P09951	P09951	F	G
PF00224	PF00224	PK	PK	Q27686	Q27686	D	B
PF02887	PF02887	PK_C	PK_C	Q27686	Q27686	F	E
PF00677	PF00677	Lum_binding	Lum_binding	P29015	P29015	B	A
PF05239	PF05239	PRC	PRC	O27887	O27887	B	A
PF00282	PF00282	Pyridoxal_deC	Pyridoxal_deC	P69910	P69910	E	F
PF02233	PF02233	PNTB	PNTB	Q59765	Q59765	B	A
PF00572	PF00453	Ribosomal_L13	Ribosomal_L20	Q9RSW7	Q9RXY1	O	H
PF00657	PF00657	Lipase_GDSL	Lipase_GDSL	Q00017	Q00017	B	A
PF01297	PF01297	SBP_bac_9	SBP_bac_9	P73085	P73085	B	A
PF00050	PF00089	Kazal_1	Trypsin	P68390	P08246	I	E
PF02429	PF02429	PCP	PCP	P80484	P80484	N	M
PF05000	PF07500	RNA_pol_Rpb1_4	TFIIS_M	P04050	P07273	A	S
PF04998	PF01096	RNA_pol_Rpb1_5	TFIIS_C	P07273	P04050	S	A
PF03874	PF00575	RNA_pol_Rpb4	S1	P34087	P20433	G	D
PF03874	PF03876	RNA_pol_Rpb4	RNA_pol_Rpb7_N	P20433	P34087	D	G
PF03440	PF01117	APT	Aerolysin	P09167	P09167	A	B
PF01117	PF01117	Aerolysin	Aerolysin	P09167	P09167	A	B
PF03440	PF03440	APT	APT	P09167	P09167	A	B
PF03936	PF03936	Terpene_synth_C	Terpene_synth_C	Q55012	Q55012	A	B
PF04166	PF04166	PdxA	PdxA	P19624	P19624	B	A
PF01608	PF01608	I_LWEQ	I_LWEQ	O75146	O75146	I	A
PF08436	PF02670	DXP_redisom_C	DXP_reductoisom	Q9X5F2	Q9X5F2	B	C
PF01188	PF02746	MR_MLE	MR_MLE_N	Q9RYA6	Q9RYA6	C	A
PF02746	PF02746	MR_MLE_N	MR_MLE_N	Q9RYA6	Q9RYA6	C	A
PF01188	PF01188	MR_MLE	MR_MLE	Q9RYA6	Q9RYA6	A	C
PF00105	PF00105	zf-C4	zf-C4	P34021	P19793	B	A
PF01974	PF01974	tRNA_int_endo	tRNA_int_endo	O29362	O29362	B	A
PF02267	PF02267	Rib_hydrolayse	Rib_hydrolayse	P29241	P29241	A	B
PF02917	PF02918	Pertussis_S1	Pertussis_S2S3	P04977	P04978	A	B
PF00578	PF00578	AhpC-TSA	AhpC-TSA	P30041	P30041	B	A
PF00088	PF00088	Trefoil	Trefoil	P01359	P01359	B	A
PF00092	PF00092	VWA	VWA	P56199	P56199	B	A
PF00050	PF00082	Kazal_1	Peptidase_S8	P68390	P00780	I	E
PF00451	PF00451	Toxin_2	Toxin_2	P83407	P83407	B	A
PF00017	PF00018	SH2	SH3_1	O89100	O89100	D	B
PF01022	PF01022	HTH_5	HTH_5	O85142	O85142	D	A
PF00384	PF00384	Molybdopterin	Molybdopterin	P09152	P09152	C	A
PF00651	PF00651	BTB	BTB	P41182	P41182	B	A
PF06968	PF06968	BATS	BATS	P12996	P12996	A	B
PF01303	PF01303	Egg_lysin	Egg_lysin	P04552	P04552	D	B
PF00756	PF00756	Esterase	Esterase	P40363	P40363	B	A
PF07498	PF07497	Rho_N	Rho_RNA_bind	P03002	P03002	B	C
PF00006	PF07498	ATP-synt_ab	Rho_N	P03002	P03002	E	D
PF01306	PF01306	LacY_symp	LacY_symp	P02920	P02920	B	A
PF00490	PF00490	ALAD	ALAD	P13716	P13716	B	A
PF00557	PF00557	Peptidase_M24	Peptidase_M24	P81535	P81535	B	A
PF00994	PF00994	MoCF_biosynth	MoCF_biosynth	P30746	P30746	A	B
PF06766	PF06766	Hydrophobin_2	Hydrophobin_2	P79073	P79073	A	B
PF07687	PF07687	M20_dimer	M20_dimer	Q96W94	Q96W94	F	E
PF01427	PF01427	Peptidase_M15	Peptidase_M15	Q06241	Q06241	C	B
PF01014	PF01014	Uricase	Uricase	Q00511	Q00511	D	B
PF00204	PF00204	DNA_gyraseB	DNA_gyraseB	P06786	P06786	A	B
PF01291	PF00041	LIF_OSM	fn3	P15018	P40189	D	C
PF00571	PF00571	CBS	CBS	Q9HLD9	Q9HLD9	B	A
PF00478	PF00478	IMPDH	IMPDH	P50097	P50097	B	A
PF06029	PF00730	AlkA_N	HhH-GPD	P04395	P04395	A	B
PF00926	PF00926	DHBP_synthase	DHBP_synthase	Q60364	Q60364	B	A
PF00059	PF00059	Lectin_C	Lectin_C	P35247	P35247	B	C
PF00291	PF00291	PALP	PALP	P09367	P09367	A	F
PF00703	PF02836	Glyco_hydro_2	Glyco_hydro_2_C	P00722	P00722	D	A
PF02836	PF02836	Glyco_hydro_2_C	Glyco_hydro_2_C	P00722	P00722	D	A
PF00703	PF02837	Glyco_hydro_2	Glyco_hydro_2_N	P00722	P00722	A	D
PF00703	PF00703	Glyco_hydro_2	Glyco_hydro_2	P00722	P00722	A	C
PF02929	PF02929	Bgal_small_N	Bgal_small_N	P00722	P00722	C	D
PF01229	PF01229	Glyco_hydro_39	Glyco_hydro_39	P36906	P36906	B	A
PF00790	PF00790	VHS	VHS	Q9UJY5	Q9UJY5	B	A
PF00025	PF01465	Arf	GRIP	P61212	Q13439	C	G
PF00025	PF00025	Arf	Arf	P61212	P61212	C	B
PF01465	PF01465	GRIP	GRIP	Q13439	Q13439	E	G
PF00031	PF00031	Cystatin	Cystatin	P01034	P01034	D	C
PF00899	PF00899	ThiF	ThiF	Q8TBC4	Q8TBC4	D	B
PF00899	PF00240	ThiF	ubiquitin	Q8TBC4	Q15843	D	J
PF00899	PF02134	ThiF	UBACT	Q8TBC4	Q13564	F	E
PF02134	PF00240	UBACT	ubiquitin	Q8TBC4	Q15843	F	K
PF00161	PF02258	RIP	SLT_beta	Q9R398	Q57249	A	F
PF01323	PF01323	DSBA	DSBA	P24473	P24473	B	A
PF00370	PF00370	FGGY_N	FGGY_N	O34153	O34153	O	X
PF00993	PF00969	MHC_II_alpha	MHC_II_beta	P04229	P01903	B	A
PF00509	PF00969	Hemagglutinin	MHC_II_beta	P04229	P11133	B	C
PF07654	PF00969	C1-set	MHC_II_beta	P04229	P01903	B	A
PF00509	PF00993	Hemagglutinin	MHC_II_alpha	P01903	P11133	A	C
PF01515	PF01515	PTA_PTB	PTA_PTB	Q99ZQ5	Q99ZQ5	B	A
PF07689	PF07689	KaiB	KaiB	Q8YT41	Q8YT41	B	A
PF04199	PF04199	Cyclase	Cyclase	P84132	P84132	B	A
PF08535	PF02195	KorB	ParBc	P07674	P07674	C	B
PF02195	PF02195	ParBc	ParBc	P07674	P07674	B	D
PF00307	PF00307	CH	CH	Q7G188	Q7G188	A	B
PF00715	PF00715	IL2	IL2	P60568	P60568	B	C
PF02329	PF02329	HDC	HDC	P00862	P00862	B	D
PF00993	PF00993	MHC_II_alpha	MHC_II_alpha	P04224	P04224	A	C
PF01992	PF01992	vATP-synt_AC39	vATP-synt_AC39	P74902	P74902	B	C
PF00579	PF00579	tRNA-synt_1b	tRNA-synt_1b	P23381	P23381	A	B
PF08242	PF08242	Methyltransf_12	Methyltransf_12	Q14749	Q14749	A	B
PF00128	PF00128	Alpha-amylase	Alpha-amylase	Q84HQ2	Q84HQ2	B	A
PF00355	PF00355	Rieske	Rieske	P37332	P37332	A	B
PF00374	PF01058	NiFeSe_Hases	Oxidored_q6	P18187	P18188	S	L
PF00374	PF08425	NiFeSe_Hases	NiFe_dehyd_N	P18187	P18188	S	L
PF00196	PF00196	GerE	GerE	P11470	P11470	E	D
PF07823	PF07823	CPDase	CPDase	O04147	O04147	A	C
PF02115	PF02115	Rho_GDI	Rho_GDI	P52565	P52565	B	A
PF00020	PF00020	TNFR_c6	TNFR_c6	P19438	P19438	A	B
PF00560	PF00560	LRR_1	LRR_1	Q9UBU9	Q9UBU9	B	D
PF03472	PF00196	Autoind_bind	GerE	P33905	P33905	D	C
PF03472	PF03472	Autoind_bind	Autoind_bind	P33905	P33905	D	C
PF01918	PF01918	Alba	Alba	P60849	P60849	B	A
PF00969	PF00969	MHC_II_beta	MHC_II_beta	Q30126	Q30126	B	E
PF00136	PF00969	DNA_pol_B	MHC_II_beta	Q30126	P03198	B	C
PF00136	PF00993	DNA_pol_B	MHC_II_alpha	P03198	P01903	F	D
PF02901	PF02901	PFL	PFL	P09373	P09373	A	B
PF00457	PF00457	Glyco_hydro_11	Glyco_hydro_11	Q8J1V6	Q8J1V6	B	A
PF02234	PF00134	CDI	Cyclin_N	P46527	P20248	E	B
PF00172	PF00172	Zn_clus	Zn_clus	P07272	P07272	A	B
PF03484	PF01409	B5	tRNA-synt_2d	P27002	P27001	B	A
PF03483	PF01409	B3_4	tRNA-synt_2d	P27001	P27002	A	B
PF00246	PF02244	Peptidase_M14	Propep_M14	P00730	P00730	A	B
PF02244	PF00089	Propep_M14	Trypsin	P00730	P05805	A	C
PF02866	PF00056	Ldh_1_C	Ldh_1_N	P90613	P90613	C	D
PF01376	PF01376	Enterotoxin_b	Enterotoxin_b	P32890	P32890	D	H
PF08423	PF08423	Rad51	Rad51	O74036	O74036	D	E
PF00462	PF00462	Glutaredoxin	Glutaredoxin	O69271	O69271	A	B
PF03161	PF03161	LAGLIDADG_2	LAGLIDADG_2	P03882	P03882	A	B
PF04107	PF04107	GCS2	GCS2	P77213	P77213	B	A
PF00511	PF00511	PPV_E2_C	PPV_E2_C	Q84294	Q84294	B	A
PF07688	PF07688	KaiA	KaiA	Q79PF6	Q79PF6	B	A
PF00025	PF01369	Arf	Sec7	Q99418	P84080	E	A
PF01369	PF01369	Sec7	Sec7	Q99418	Q99418	E	F
PF01174	PF01174	SNO	SNO	P37528	P37528	B	A
PF02780	PF02780	Transketolase_C	Transketolase_C	Q8MPM3	Q8MPM3	B	A
PF02779	PF02780	Transket_pyr	Transketolase_C	Q8MPM3	Q8MPM3	B	A
PF02780	PF00456	Transketolase_C	Transketolase_N	Q8MPM3	Q8MPM3	B	A
PF02779	PF00456	Transket_pyr	Transketolase_N	Q8MPM3	Q8MPM3	A	B
PF02779	PF02779	Transket_pyr	Transket_pyr	Q8MPM3	Q8MPM3	A	B
PF00456	PF00456	Transketolase_N	Transketolase_N	Q8MPM3	Q8MPM3	B	A
PF00562	PF03870	RNA_pol_Rpb2_6	RNA_pol_Rpb8	P08518	P20436	B	H
PF06433	PF02975	Me-amine-dh_H	Me-amine-dh_L	P22641	P23006	L	H
PF00548	PF00548	Peptidase_C3	Peptidase_C3	P26582	P26582	C	D
PF00061	PF00576	Lipocalin	Transthyretin	P02766	P02753	B	F
PF01223	PF01223	Endonuclease_NS	Endonuclease_NS	P13717	P13717	B	A
PF01729	PF02749	QRPTase_C	QRPTase_N	P30012	P30012	B	A
PF01729	PF01729	QRPTase_C	QRPTase_C	P30012	P30012	A	B
PF00388	PF00387	PI-PLC-X	PI-PLC-Y	P10688	P10688	A	B
PF00388	PF00388	PI-PLC-X	PI-PLC-X	P10688	P10688	B	A
PF02081	PF02081	TrpBP	TrpBP	Q9X6J6	Q9X6J6	B	A
PF02978	PF02978	SRP_SPB	SRP_SPB	P61011	P61011	B	A
PF01111	PF01111	CKS	CKS	P20486	P20486	B	C
PF06453	PF06453	LT-IIB	LT-IIB	P43529	P43529	D	H
PF02525	PF02525	Flavodoxin_2	Flavodoxin_2	P15559	P15559	D	B
PF00568	PF00568	WH1	WH1	P70429	P70429	B	A
PF01706	PF01706	FliG_C	FliG_C	Q9WY63	Q9WY63	B	A
PF07654	PF07686	C1-set	V-set	P01842	P01709	2	2
PF00129	PF00945	MHC_I	Rhabdo_ncap	P01901	P11212	C	F
PF00187	PF00187	Chitin_bind_1	Chitin_bind_1	P10968	P10968	A	B
PF07995	PF07995	GSDH	GSDH	P13650	P13650	A	B
PF02295	PF02295	z-alpha	z-alpha	P55265	P55265	B	C
PF02985	PF00071	HEAT	Ras	P62826	Q92973	C	B
PF03810	PF00071	IBN_N	Ras	P62826	Q92973	C	B
PF02961	PF02961	BAF	BAF	O75531	O75531	A	B
PF02971	PF02971	FTCD	FTCD	P53603	P53603	B	A
PF00425	PF00117	Chorismate_bind	GATase	Q06129	Q06128	B	A
PF04715	PF00117	Anth_synt_I_N	GATase	Q06129	Q06128	B	A
PF02933	PF02359	CDC48_2	CDC48_N	P18708	P18708	C	B
PF02359	PF02359	CDC48_N	CDC48_N	P18708	P18708	B	A
PF02214	PF02214	K_tetra	K_tetra	P63142	P63142	D	C
PF00896	PF00896	Mtap_PNP	Mtap_PNP	P81989	P81989	C	B
PF07880	PF07880	T4_gp9_10	T4_gp9_10	P10927	P10927	B	A
PF00719	PF00719	Pyrophosphatase	Pyrophosphatase	P50308	P50308	C	E
PF01214	PF01214	CK_II_beta	CK_II_beta	P67870	P67870	B	A
PF01487	PF01487	DHquinase_I	DHquinase_I	P24670	P24670	B	A
PF00630	PF00630	Filamin	Filamin	P13466	P13466	B	A
PF01725	PF01725	Ham1p_like	Ham1p_like	Q57679	Q57679	B	A
PF00175	PF00175	NAD_binding_1	NAD_binding_1	P23486	P23486	C	D
PF00970	PF00175	FAD_binding_6	NAD_binding_1	P23486	P23486	D	A
PF02098	PF02098	His_binding	His_binding	O77421	O77421	B	A
PF00328	PF00328	Acid_phosphat_A	Acid_phosphat_A	P34755	P34755	B	A
PF00561	PF00561	Abhydrolase_1	Abhydrolase_1	Q05489	Q05489	E	D
PF00210	PF00210	Ferritin	Ferritin	P80725	P80725	B	G
PF02985	PF01749	HEAT	IBB	Q14974	P52292	A	B
PF00514	PF01749	Arm	IBB	Q14974	P52292	A	B
PF00502	PF02972	Phycobilisome	Phycoerythr_ab	P27198	Q00433	D	B
PF02972	PF02972	Phycoerythr_ab	Phycoerythr_ab	Q00433	Q00433	B	A
PF00217	PF02807	ATP-gua_Ptrans	ATP-gua_PtransN	P05122	P05122	C	D
PF00349	PF03727	Hexokinase_1	Hexokinase_2	P19367	P19367	B	A
PF03727	PF03727	Hexokinase_2	Hexokinase_2	P19367	P19367	B	A
PF00349	PF00349	Hexokinase_1	Hexokinase_1	P19367	P19367	A	B
PF01569	PF01569	PAP2	PAP2	Q8LLW7	Q8LLW7	C	F
PF00300	PF00300	PGAM	PGAM	P00950	P00950	B	A
PF00580	PF00580	UvrD-helicase	UvrD-helicase	P56255	P56255	C	B
PF01372	PF01372	Melittin	Melittin	P01501	P01501	B	A
PF00608	PF00608	Adeno_shaft	Adeno_shaft	P03275	P03275	C	B
PF00541	PF00608	Adeno_knob	Adeno_shaft	P03275	P03275	F	B
PF00244	PF00244	14-3-3	14-3-3	P63104	P63104	B	A
PF01095	PF01095	Pectinesterase	Pectinesterase	P07863	P07863	B	A
PF00983	PF00983	Tymo_coat	Tymo_coat	P36351	P36351	B	A
PF00217	PF00217	ATP-gua_Ptrans	ATP-gua_Ptrans	P12532	P12532	F	D
PF00087	PF00087	Toxin_1	Toxin_1	P60775	P60775	B	A
PF02781	PF00479	G6PD_C	G6PD_N	P11413	P11413	D	E
PF02781	PF02781	G6PD_C	G6PD_C	P11413	P11413	F	G
PF00479	PF00479	G6PD_N	G6PD_N	P11413	P11413	A	E
PF01044	PF01044	Vinculin	Vinculin	P12003	P12003	B	A
PF00890	PF00037	FAD_binding_2	Fer4	P17412	P17596	A	B
PF02967	PF02967	Fum_red_TM	Fum_red_TM	P17413	P17413	F	C
PF00037	PF02967	Fer4	Fum_red_TM	P17413	P17596	F	E
PF02773	PF02772	S-AdoMet_synt_C	S-AdoMet_synt_M	P13444	P13444	A	B
PF02772	PF00438	S-AdoMet_synt_M	S-AdoMet_synt_N	P13444	P13444	A	B
PF02772	PF02772	S-AdoMet_synt_M	S-AdoMet_synt_M	P13444	P13444	A	B
PF02773	PF00438	S-AdoMet_synt_C	S-AdoMet_synt_N	P13444	P13444	A	B
PF00438	PF00438	S-AdoMet_synt_N	S-AdoMet_synt_N	P13444	P13444	A	B
PF02773	PF02773	S-AdoMet_synt_C	S-AdoMet_synt_C	P13444	P13444	B	A
PF00510	PF07835	COX3	COX4_pro_2	P06030	P77921	C	D
PF00115	PF07835	COX1	COX4_pro_2	P77921	P98002	D	A
PF00129	PF00973	MHC_I	Paramyxo_ncap	P04857	P01899	C	A
PF02913	PF01565	FAD-oxidase_C	FAD_binding_4	P56216	P56216	B	A
PF01565	PF01565	FAD_binding_4	FAD_binding_4	P56216	P56216	B	A
PF02913	PF02913	FAD-oxidase_C	FAD-oxidase_C	P56216	P56216	A	B
PF02797	PF00195	Chal_sti_synt_C	Chal_sti_synt_N	P48391	P48391	B	A
PF00195	PF00195	Chal_sti_synt_N	Chal_sti_synt_N	P48391	P48391	B	A
PF02797	PF02797	Chal_sti_synt_C	Chal_sti_synt_C	P48391	P48391	A	B
PF07991	PF07991	IlvN	IlvN	Q01292	Q01292	D	B
PF01137	PF01137	RTC	RTC	P46849	P46849	B	A
PF01137	PF05189	RTC	RTC_insert	P46849	P46849	C	A
PF05408	PF05408	Peptidase_C28	Peptidase_C28	P03305	P03305	A	B
PF03861	PF03861	ANTAR	ANTAR	P10932	P10932	D	E
PF00137	PF00137	ATP-synt_C	ATP-synt_C	P68699	P68699	Q	P
PF00977	PF00977	His_biosynth	His_biosynth	Q9X0C7	Q9X0C7	B	A
PF00059	PF08391	Lectin_C	Ly49	P20937	P20937	D	C
PF08391	PF08391	Ly49	Ly49	P20937	P20937	D	C
PF00516	PF00129	GP120	MHC_I	P01900	P04582	A	P
PF00274	PF00274	Glycolytic	Glycolytic	P05062	P05062	J	I
PF00561	PF06441	Abhydrolase_1	EHN	Q9UR30	Q9UR30	A	B
PF06441	PF06441	EHN	EHN	Q9UR30	Q9UR30	A	B
PF00890	PF00890	FAD_binding_2	FAD_binding_2	Q9Z4P0	Q9Z4P0	D	A
PF00635	PF00635	Motile_Sperm	Motile_Sperm	P27440	P27440	D	H
PF00127	PF02975	Copper-bind	Me-amine-dh_L	P22619	P22364	L	A
PF00127	PF00034	Copper-bind	Cytochrom_C	P29899	P22364	C	A
PF00127	PF06433	Copper-bind	Me-amine-dh_H	P22364	P29894	A	H
PF00686	PF01373	CBM_20	Glyco_hydro_14	Q9Z4N9	Q9Z4N9	C	A
PF01373	PF01373	Glyco_hydro_14	Glyco_hydro_14	Q9Z4N9	Q9Z4N9	D	C
PF01161	PF01161	PBP	PBP	Q41261	Q41261	B	A
PF00389	PF02826	2-Hacid_dh	2-Hacid_dh_C	Q8ZXP5	Q8ZXP5	B	A
PF02826	PF02826	2-Hacid_dh_C	2-Hacid_dh_C	Q8ZXP5	Q8ZXP5	B	A
PF00141	PF00141	peroxidase	peroxidase	P11542	P11542	B	A
PF02753	PF00345	Pili_assembly_C	Pili_assembly_N	P15319	P15319	A	B
PF00345	PF00345	Pili_assembly_N	Pili_assembly_N	P15319	P15319	A	B
PF00702	PF00702	Hydrolase	Hydrolase	Q60099	Q60099	B	A
PF02821	PF02821	Staphylokinase	Staphylokinase	P00779	P00779	D	C
PF00665	PF00665	rve	rve	Q76353	Q76353	A	B
PF00917	PF00917	MATH	MATH	Q12933	Q12933	C	B
PF02970	PF02970	TBCA	TBCA	P48606	P48606	B	A
PF01213	PF01213	CAP	CAP	P54654	P54654	A	B
PF00940	PF00940	RNA_pol	RNA_pol	P00573	P00573	B	A
PF07467	PF00144	BLIP	Beta-lactamase	P35804	P62593	D	B
PF04327	PF04327	DUF464	DUF464	Q9X1G8	Q9X1G8	B	A
PF00204	PF02518	DNA_gyraseB	HATPase_c	P20083	P20083	B	A
PF01327	PF01327	Pep_deformylase	Pep_deformylase	Q9I7A8	Q9I7A8	A	B
PF05932	PF05932	CesT	CesT	Q9K2L2	Q9K2L2	D	B
PF07678	PF07678	A2M_comp	A2M_comp	P01026	P01026	B	A
PF02210	PF02210	Laminin_G_2	Laminin_G_2	Q60675	Q60675	B	A
PF00015	PF00015	MCPsignal	MCPsignal	P02942	P02942	B	A
PF01993	PF01993	MTD	MTD	P94951	P94951	C	B
PF04354	PF04354	ZipA_C	ZipA_C	P77173	P77173	A	B
PF05743	PF00240	Tsg101	ubiquitin	P62988	Q99816	B	A
PF05014	PF05014	Nuc_deoxyrib_tr	Nuc_deoxyrib_tr	Q8RLY5	Q8RLY5	C	B
PF01510	PF01510	Amidase_2	Amidase_2	Q9VYX7	Q9VYX7	B	A
PF00114	PF00114	Pilin	Pilin	P17838	P17838	B	A
PF00469	PF00129	F-protein	MHC_I	P13746	P04602	D	F
PF06964	PF06964	Alpha-L-AF_C	Alpha-L-AF_C	Q9XBQ3	Q9XBQ3	B	A
PF00970	PF00970	FAD_binding_6	FAD_binding_6	P20070	P20070	A	B
PF01289	PF01289	Thiol_cytolysin	Thiol_cytolysin	Q9LCB8	Q9LCB8	B	A
PF02359	PF00789	CDC48_N	UBX	Q01853	O35987	F	G
PF00288	PF00288	GHMP_kinases_N	GHMP_kinases_N	Q9HHB6	Q9HHB6	A	B
PF08544	PF08544	GHMP_kinases_C	GHMP_kinases_C	Q9HHB6	Q9HHB6	F	A
PF06574	PF01687	FAD_syn	Flavokinase	Q9WZW1	Q9WZW1	A	B
PF01793	PF01793	Glyco_transf_15	Glyco_transf_15	P27809	P27809	B	A
PF01239	PF01239	PPTA	PPTA	Q04631	Q04631	A	G
PF01844	PF01844	HNH	HNH	P09883	P09883	B	D
PF00407	PF07654	Bet_v_I	C1-set	P15494	P01837	A	H
PF00135	PF00087	COesterase	Toxin_1	P01403	P04058	B	A
PF01913	PF02741	FTR	FTR_C	Q49610	Q49610	D	C
PF01913	PF01913	FTR	FTR	Q49610	Q49610	D	C
PF02741	PF02741	FTR_C	FTR_C	Q49610	Q49610	C	D
PF06632	PF06632	XRCC4	XRCC4	Q13426	Q13426	B	A
PF00834	PF00834	Ribul_P_3_epim	Ribul_P_3_epim	Q9SE42	Q9SE42	B	A
PF07447	PF07447	VP40	VP40	Q05128	Q05128	B	A
PF04098	PF04098	Rad52_Rad22	Rad52_Rad22	P43351	P43351	L	V
PF01036	PF00672	Bac_rhodopsin	HAMP	P42259	P42196	B	A
PF00432	PF00432	Prenyltrans	Prenyltrans	P33247	P33247	B	A
PF07477	PF07488	Glyco_hydro_67C	Glyco_hydro_67M	Q8VP74	Q8VP74	A	B
PF07488	PF07488	Glyco_hydro_67M	Glyco_hydro_67M	Q8VP74	Q8VP74	A	B
PF01238	PF01238	PMI_typeI	PMI_typeI	P39841	P39841	B	A
PF01815	PF01815	Rop	Rop	P03051	P03051	B	A
PF06560	PF06560	GPI	GPI	P83194	P83194	B	A
PF02567	PF02567	PhzC-PhzF	PhzC-PhzF	P37757	P37757	A	C
PF00102	PF00102	Y_phosphatase	Y_phosphatase	Q7ARH8	Q7ARH8	B	A
PF00183	PF00515	HSP90	TPR_1	Q02790	P08238	A	G
PF01375	PF01376	Enterotoxin_a	Enterotoxin_b	P01556	P01555	F	A
PF05151	PF01405	PsbM	PsbT	Q8DHA7	Q8DIQ0	M	T
PF00124	PF05151	Photo_RC	PsbM	Q8DHA7	Q8CM25	M	D
PF02419	PF05151	PsbL	PsbM	Q8DHA7	Q8DIN8	M	L
PF00421	PF05151	PSII	PsbM	Q8DHA7	Q8DIQ1	M	B
PF00283	PF00284	Cytochrom_B559	Cytochrom_B559a	Q8DIP0	Q8DIN9	E	F
PF00284	PF00124	Cytochrom_B559a	Photo_RC	Q8DIP0	Q8CM25	E	D
PF00284	PF00737	Cytochrom_B559a	PsbH	Q8DIP0	Q8DJ43	E	H
PF00283	PF01788	Cytochrom_B559	PsbJ	P59087	Q8DIN9	J	F
PF00421	PF01788	PSII	PsbJ	P59087	Q8DIF8	J	C
PF01788	PF02533	PsbJ	PsbK	P59087	Q9F1K9	J	K
PF00283	PF00283	Cytochrom_B559	Cytochrom_B559	Q8DIN9	Q8DIP0	F	E
PF00283	PF00124	Cytochrom_B559	Photo_RC	Q8DIN9	Q8CM25	F	D
PF00283	PF06596	Cytochrom_B559	PsbX	Q8DIN9	Q8DHE6	F	X
PF00421	PF06514	PSII	PsbU	Q9F1L5	Q8DIF8	U	C
PF00124	PF06514	Photo_RC	PsbU	Q9F1L5	Q8CM25	U	D
PF00421	PF01737	PSII	Ycf9	Q8DIF8	Q8DHJ2	C	Z
PF00421	PF00124	PSII	Photo_RC	Q8DIF8	Q8CM25	C	D
PF00421	PF02532	PSII	PsbI	Q8DIF8	Q8DJZ6	C	I
PF00421	PF02533	PSII	PsbK	Q8DIF8	Q9F1K9	C	K
PF00283	PF00737	Cytochrom_B559	PsbH	Q8DIP0	Q8DJ43	E	H
PF00124	PF01405	Photo_RC	PsbT	Q8DIQ0	Q8CM25	T	D
PF02419	PF01405	PsbL	PsbT	Q8DIQ0	Q8DIN8	T	L
PF02533	PF01737	PsbK	Ycf9	Q8DHJ2	Q9F1K9	Z	K
PF00124	PF02419	Photo_RC	PsbL	Q8CM25	Q8DIN8	D	L
PF00124	PF02532	Photo_RC	PsbI	Q8CM25	Q8DJZ6	D	I
PF00124	PF06596	Photo_RC	PsbX	Q8CM25	Q8DHE6	D	X
PF00124	PF00737	Photo_RC	PsbH	Q8CM25	Q8DJ43	D	H
PF00421	PF02419	PSII	PsbL	Q8DIN8	Q8DIQ1	L	B
PF00421	PF00737	PSII	PsbH	Q8DIQ1	Q8DJ43	B	H
PF00737	PF06596	PsbH	PsbX	Q8DHE6	Q8DJ43	X	H
PF00132	PF06426	Hexapep	SATase_N	P43886	P43886	C	B
PF06426	PF06426	SATase_N	SATase_N	P43886	P43886	E	F
PF05368	PF05368	NmrA	NmrA	Q9LL41	Q9LL41	B	A
PF00398	PF00398	RrnaAD	RrnaAD	P06992	P06992	B	A
PF01462	PF00560	LRRNT	LRR_1	P07359	P07359	A	G
PF00303	PF00303	Thymidylat_synt	Thymidylat_synt	Q27552	Q27552	A	B
PF02765	PF02765	Telo_bind	Telo_bind	O13988	O13988	B	A
PF00448	PF02978	SRP54	SRP_SPB	Q97ZE7	Q97ZE7	A	B
PF00034	PF00141	Cytochrom_C	peroxidase	P00044	P00431	B	A
PF00893	PF00893	Multi_Drug_Res	Multi_Drug_Res	P23895	P23895	C	D
PF02146	PF02146	SIR2	SIR2	O30124	O30124	B	E
PF07615	PF07615	Ykof	Ykof	O34911	O34911	D	C
PF05662	PF05662	HIM	HIM	Q48152	Q48152	C	A
PF04297	PF04297	UPF0122	UPF0122	P67253	P67253	C	B
PF00798	PF00129	Arena_glycoprot	MHC_I	P01901	P07399	A	C
PF00798	PF07654	Arena_glycoprot	C1-set	P07399	P01887	C	K
PF00804	PF00804	Syntaxin	Syntaxin	O46345	O46345	B	A
PF00817	PF00817	IMS	IMS	Q97W02	Q97W02	B	A
PF00775	PF04444	Dioxygenase_C	Dioxygenase_N	O67987	O67987	A	B
PF04444	PF04444	Dioxygenase_N	Dioxygenase_N	O67987	O67987	A	B
PF00170	PF00170	bZIP_1	bZIP_1	P03069	P03069	B	C
PF00636	PF00636	Ribonuclease_3	Ribonuclease_3	O67082	O67082	C	D
PF07883	PF07883	Cupin_2	Cupin_2	P75713	P75713	A	B
PF00290	PF00290	Trp_syntA	Trp_syntA	P42390	P42390	B	A
PF02274	PF02274	Amidinotransf	Amidinotransf	P23793	P23793	A	B
PF00993	PF00047	MHC_II_alpha	ig	P01918	P01909	E	D
PF07361	PF07361	Cytochrom_B562	Cytochrom_B562	P00192	P00192	B	A
PF02788	PF00101	RuBisCO_large_N	RuBisCO_small	P00870	P00875	C	E
PF02788	PF02788	RuBisCO_large_N	RuBisCO_large_N	P00875	P00875	B	E
PF01322	PF01322	Cytochrom_C_2	Cytochrom_C_2	P00147	P00147	B	A
PF03641	PF03641	Lysine_decarbox	Lysine_decarbox	Q9X0E5	Q9X0E5	A	C
PF00075	PF00075	RnaseH	RnaseH	P03366	P03366	B	A
PF00147	PF00147	Fibrinogen_C	Fibrinogen_C	P02675	P02679	E	F
PF00206	PF00206	Lyase_1	Lyase_1	Q88N37	Q88N37	A	C
PF01642	PF01642	MM_CoA_mutase	MM_CoA_mutase	P11653	P11652	C	D
PF01589	PF01589	Alpha_E1_glycop	Alpha_E1_glycop	P03315	P03315	A	C
PF00714	PF00714	IFN-gamma	IFN-gamma	P07353	P07353	B	A
PF00294	PF00294	PfkB	PfkB	P82197	P82197	D	C
PF06954	PF06954	Resistin	Resistin	Q99P87	Q99P87	C	B
PF01892	PF01892	DUF64	DUF64	P84133	P84133	D	B
PF07825	PF07825	Exc	Exc	P03699	P03699	B	A
PF00489	PF00489	IL6	IL6	P09919	P09919	C	B
PF00475	PF00475	IGPD	IGPD	P40919	P40919	B	A
PF04851	PF04851	ResIII	ResIII	P20703	P20703	B	A
PF00169	PF00621	PH	RhoGEF	Q63406	Q63406	D	G
PF00621	PF00621	RhoGEF	RhoGEF	Q63406	Q63406	J	G
PF04043	PF04043	PMEI	PMEI	O49908	O49908	D	A
PF00194	PF00194	Carb_anhydrase	Carb_anhydrase	Q9WVT6	Q9WVT6	B	A
PF01381	PF04545	HTH_3	Sigma70_r4	Q9EZJ8	P03034	H	B
PF04072	PF04072	LCM	LCM	Q04081	Q04081	A	B
PF00606	PF00129	Glycoprotein_B	MHC_I	P06436	P01901	P	A
PF00181	PF00181	Ribosomal_L2	Ribosomal_L2	P04257	P04257	A	B
PF03358	PF03358	FMN_red	FMN_red	P96726	P96726	C	B
PF08282	PF08282	Hydrolase_3	Hydrolase_3	P75792	P75792	C	D
PF00091	PF00091	Tubulin	Tubulin	P64170	P64170	B	A
PF02738	PF00941	Ald_Xan_dh_C2	FAD_binding_5	O33819	O33820	D	E
PF02738	PF00111	Ald_Xan_dh_C2	Fer2	O33819	O33818	D	F
PF01315	PF01799	Ald_Xan_dh_C	Fer2_2	O33819	O33818	A	F
PF01315	PF00941	Ald_Xan_dh_C	FAD_binding_5	O33819	O33820	A	B
PF00941	PF00111	FAD_binding_5	Fer2	O33818	O33820	C	B
PF00941	PF01799	FAD_binding_5	Fer2_2	O33820	O33818	E	F
PF03767	PF03767	Acid_phosphat_B	Acid_phosphat_B	P32697	P32697	A	B
PF06002	PF06002	CST-I	CST-I	Q9LAK3	Q9LAK3	B	A
PF01916	PF01916	DS	DS	P49366	P49366	B	A
PF04539	PF04539	Sigma70_r3	Sigma70_r3	O67268	O67268	E	F
PF04542	PF04539	Sigma70_r2	Sigma70_r3	O67268	O67268	E	C
PF04539	PF04545	Sigma70_r3	Sigma70_r4	O67268	O67268	D	G
PF04542	PF04545	Sigma70_r2	Sigma70_r4	O67268	O67268	A	E
PF04545	PF04545	Sigma70_r4	Sigma70_r4	O67268	O67268	G	C
PF03717	PF00905	PBP_dimer	Transpeptidase	P14677	P14677	A	B
PF03717	PF03717	PBP_dimer	PBP_dimer	P14677	P14677	A	B
PF00472	PF00472	RF-1	RF-1	Q9X183	Q9X183	A	C
PF03462	PF00472	PCRF	RF-1	Q9X183	Q9X183	A	C
PF03220	PF03220	Tombus_P19	Tombus_P19	Q66104	Q66104	B	A
PF00348	PF00348	polyprenyl_synt	polyprenyl_synt	P22939	P22939	B	A
PF07714	PF00017	Pkinase_Tyr	SH2	Q9Z200	P06213	D	B
PF00305	PF00305	Lipoxygenase	Lipoxygenase	P09186	P09186	A	B
PF00638	PF00071	Ran_BP1	Ras	P49792	P62826	D	C
PF06352	PF06352	DUF1061	DUF1061	Q81BA8	Q81BA8	B	A
PF00514	PF06384	Arm	ICAT	Q9NSA3	P35222	B	A
PF05923	PF00514	APC_crr	Arm	P35222	P25054	A	C
PF02542	PF02542	YgbB	YgbB	Q8EBR3	Q8EBR3	C	B
PF00774	PF00018	Ca_channel_B	SH3_1	Q8VGC3	Q8VGC3	B	A
PF02332	PF02332	Phenol_Hydrox	Phenol_Hydrox	O87802	O87798	B	A
PF06234	PF04945	TmoB	YHS	O87798	O87799	A	C
PF05698	PF05698	Trigger_C	Trigger_C	Q9KQS5	Q9KQS5	B	A
PF05698	PF05697	Trigger_C	Trigger_N	Q9KQS5	Q9KQS5	B	A
PF05697	PF05697	Trigger_N	Trigger_N	Q9KQS5	Q9KQS5	B	A
PF03349	PF03349	Toluene_X	Toluene_X	P10384	P10384	B	A
PF01329	PF01329	Pterin_4a	Pterin_4a	Q9CZL5	Q9CZL5	B	A
PF01902	PF01902	ATP_bind_4	ATP_bind_4	Q8U2K6	Q8U2K6	B	A
PF02201	PF02201	SWIB	SWIB	Q00987	Q00987	A	C
PF00136	PF00136	DNA_pol_B	DNA_pol_B	Q38087	Q38087	B	D
PF00464	PF00464	SHMT	SHMT	P07511	P07511	B	A
PF00537	PF00537	Toxin_3	Toxin_3	O77091	O77091	B	A
PF04908	PF04908	SH3BGR	SH3BGR	Q91VW3	Q91VW3	B	A
PF00605	PF00170	IRF	bZIP_1	Q14653	P15336	A	D
PF00241	PF00241	Cofilin_ADF	Cofilin_ADF	Q14019	Q14019	B	A
PF04203	PF04203	Sortase	Sortase	Q9S446	Q9S446	A	C
PF00440	PF00440	TetR_N	TetR_N	Q8ZQN9	Q8ZQN9	B	A
PF01094	PF01094	ANF_receptor	ANF_receptor	P18910	P18910	B	A
PF01094	PF00212	ANF_receptor	ANP	P18910	P01161	B	H
PF01923	PF01923	Cob_adeno_trans	Cob_adeno_trans	O34899	O34899	B	C
PF01116	PF01116	F_bP_aldolase	F_bP_aldolase	Q9RHA2	Q9RHA2	C	D
PF02578	PF02578	DUF152	DUF152	Q8Z4J1	Q8Z4J1	B	A
PF00441	PF02770	Acyl-CoA_dh_1	Acyl-CoA_dh_M	Q9UKU7	Q9UKU7	D	B
PF00441	PF00441	Acyl-CoA_dh_1	Acyl-CoA_dh_1	Q9UKU7	Q9UKU7	D	A
PF00533	PF00533	BRCT	BRCT	P38398	P38398	C	B
PF01742	PF01742	Peptidase_M27	Peptidase_M27	Q00496	Q00496	B	A
PF00994	PF03454	MoCF_biosynth	MoeA_C	Q03555	Q03555	B	A
PF00994	PF03453	MoCF_biosynth	MoeA_N	Q03555	Q03555	B	A
PF03454	PF03454	MoeA_C	MoeA_C	Q03555	Q03555	A	B
PF03454	PF03453	MoeA_C	MoeA_N	Q03555	Q03555	A	B
PF03454	PF02932	MoeA_C	Neur_chan_memb	Q03555	P20781	B	P
PF03453	PF02932	MoeA_N	Neur_chan_memb	P20781	Q03555	P	B
PF01582	PF01582	TIR	TIR	Q9NZN1	Q9NZN1	B	A
PF00266	PF00266	Aminotran_5	Aminotran_5	Q55793	Q55793	B	A
PF02738	PF03450	Ald_Xan_dh_C2	CO_deh_flav_C	P72224	P72222	B	C
PF05164	PF05164	ZapA	ZapA	Q9HTW3	Q9HTW3	C	D
PF08278	PF08278	DnaG_DnaB_bind	DnaG_DnaB_bind	P02923	P02923	B	A
PF02700	PF02700	PurS	PurS	P12049	P12049	B	A
PF00035	PF00035	dsrm	dsrm	Q02555	Q02555	B	A
PF06171	PF06171	DUF984	DUF984	Q82ZD1	Q82ZD1	B	A
PF07882	PF07882	Fucose_iso_N2	Fucose_iso_N2	P69922	P69922	C	F
PF07881	PF07882	Fucose_iso_N1	Fucose_iso_N2	P69922	P69922	C	B
PF02952	PF07882	Fucose_iso_C	Fucose_iso_N2	P69922	P69922	C	F
PF02952	PF07881	Fucose_iso_C	Fucose_iso_N1	P69922	P69922	D	E
PF07881	PF07881	Fucose_iso_N1	Fucose_iso_N1	P69922	P69922	D	A
PF00995	PF00995	Sec1	Sec1	O62547	O62547	B	A
PF02493	PF00856	MORN	SET	Q8WTS6	Q8WTS6	B	A
PF01128	PF01128	IspD	IspD	Q46893	Q46893	B	A
PF05236	PF03847	TAF4	TFIID_20kDa	Q16514	O00268	B	A
PF03847	PF03847	TFIID_20kDa	TFIID_20kDa	Q16514	Q16514	B	D
PF05236	PF05236	TAF4	TAF4	O00268	O00268	A	C
PF02315	PF01011	MDH	PQQ	P14775	P16027	B	A
PF02315	PF02315	MDH	MDH	P14775	P14775	D	H
PF03261	PF00069	CDK5_activator	Pkinase	Q15078	Q00535	E	B
PF03636	PF03632	Glyco_hydro_65N	Glyco_hydro_65m	Q7SIE1	Q7SIE1	A	B
PF03632	PF03632	Glyco_hydro_65m	Glyco_hydro_65m	Q7SIE1	Q7SIE1	A	B
PF03636	PF03636	Glyco_hydro_65N	Glyco_hydro_65N	Q7SIE1	Q7SIE1	A	B
PF00219	PF00049	IGFBP	Insulin	P24593	P01343	B	A
PF00504	PF00504	Chloroa_b-bind	Chloroa_b-bind	P12333	P12333	H	E
PF02290	PF05486	SRP14	SRP9	P49458	P37108	C	D
PF00001	PF02978	7tm_1	SRP_SPB	O62798	P14576	S	W
PF00001	PF01922	7tm_1	SRP19	O62798	P09132	S	B
PF02881	PF02978	SRP54_N	SRP_SPB	O07347	P14576	U	W
PF01922	PF02978	SRP19	SRP_SPB	P14576	P09132	W	B
PF03519	PF03519	Invas_SpaK	Invas_SpaK	P35530	P35530	A	B
PF00529	PF00529	HlyD	HlyD	P52477	P52477	D	K
PF01008	PF01008	IF-2B	IF-2B	O29877	O29877	A	B
PF07968	PF07968	Leukocidin	Leukocidin	O80066	O80066	D	C
PF00850	PF00850	Hist_deacetyl	Hist_deacetyl	Q9BY41	Q9BY41	A	B
PF03495	PF00092	Binary_toxB	VWA	P58335	P13423	Y	X
PF07412	PF07412	Geminin	Geminin	O75496	O75496	B	A
PF01895	PF01895	PhoU	PhoU	O67053	O67053	G	F
PF00484	PF00484	Pro_CA	Pro_CA	P61517	P61517	A	E
PF00752	PF00752	XPG_N	XPG_N	O29975	O29975	A	B
PF01613	PF01613	Flavin_Reduct	Flavin_Reduct	Q9LAG2	Q9LAG2	D	C
PF00973	PF08380	Paramyxo_ncap	Viral-P_C	Q89728	Q995N1	A	B
PF04079	PF04079	DUF387	DUF387	Q8KF54	Q8KF54	B	A
PF00062	PF07686	Lys	V-set	P00698	Q8AXI4	M	N
PF00322	PF00322	Endothelin	Endothelin	P05305	P05305	B	A
PF02179	PF02179	BAG	BAG	O44739	O44739	B	A
PF08334	PF08334	GSPII_G	GSPII_G	P15746	P15746	B	A
PF00516	PF00047	GP120	ig	P01730	P04578	C	G
PF03838	PF03838	RecU	RecU	P39792	P39792	A	B
PF00091	PF03953	Tubulin	Tubulin_C	P02554	P02550	B	A
PF00836	PF00091	Stathmin	Tubulin	P02550	P63043	C	E
PF00836	PF03953	Stathmin	Tubulin_C	P63043	P02550	E	A
PF00354	PF00354	Pentaxin	Pentaxin	P02743	P02743	C	B
PF01142	PF01142	TruD	TruD	Q57261	Q57261	B	A
PF04316	PF04539	FlgM	Sigma70_r3	O67268	O66683	A	B
PF04316	PF04542	FlgM	Sigma70_r2	O67268	O66683	A	B
PF04316	PF04545	FlgM	Sigma70_r4	O67268	O66683	A	B
PF03009	PF03009	GDPD	GDPD	P09394	P09394	B	A
PF02775	PF00205	TPP_enzyme_C	TPP_enzyme_M	P07342	P07342	D	A
PF01012	PF01012	ETF	ETF	P13804	P38117	R	S
PF02771	PF01012	Acyl-CoA_dh_N	ETF	P38117	P11310	S	D
PF00961	PF00961	LAGLIDADG_1	LAGLIDADG_1	P05725	P05725	B	A
PF00301	PF00301	Rubredoxin	Rubredoxin	P00268	P00268	B	C
PF02936	PF02297	COX4	COX6B	P00429	P00423	U	P
PF00510	PF05392	COX3	COX7B	P13183	P00415	X	Q
PF02790	PF00510	COX2_TM	COX3	P68530	P00415	O	Q
PF00510	PF02937	COX3	COX6C	P04038	P00415	I	D
PF00510	PF02936	COX3	COX4	P00423	P00415	D	D
PF00510	PF02285	COX3	COX8	P00415	P10175	D	M
PF02936	PF02046	COX4	COX6A	P00423	P07471	C	G
PF00082	PF00280	Peptidase_S8	potato_inhibit	P01051	P00782	I	E
PF01812	PF01812	5-FTHF_cyc-lig	5-FTHF_cyc-lig	P75430	P75430	A	B
PF00228	PF00089	Bowman-Birk_leg	Trypsin	P00760	P01062	A	I
PF02404	PF02404	SCF	SCF	P21583	P21583	B	A
PF00082	PF05922	Peptidase_S8	Subtilisin_N	P04189	P04189	B	A
PF00993	PF01123	MHC_II_alpha	Stap_Strp_toxin	P01552	P01903	D	A
PF00993	PF02876	MHC_II_alpha	Stap_Strp_tox_C	P01903	P01552	A	D
PF00410	PF00410	Ribosomal_S8	Ribosomal_S8	P56209	P56209	B	A
PF00835	PF05739	SNAP-25	SNARE	P60881	P32851	H	F
PF00835	PF00957	SNAP-25	Synaptobrevin	P60881	P63045	H	E
PF05739	PF05739	SNARE	SNARE	P32851	P60881	J	L
PF05739	PF00957	SNARE	Synaptobrevin	P32851	P63045	J	A
PF00957	PF00957	Synaptobrevin	Synaptobrevin	P63045	P63045	A	I
PF01003	PF01003	Flavi_capsid	Flavi_capsid	P14335	P14335	D	C
PF01978	PF01978	TrmB	TrmB	O28271	O28271	B	A
PF00243	PF00020	NGF	TNFR_c6	P01138	P07174	B	X
PF00243	PF00243	NGF	NGF	P01138	P01138	B	A
PF03938	PF03938	OmpH	OmpH	P11457	P11457	A	B
PF03561	PF03561	Allantoicase	Allantoicase	P25335	P25335	B	A
PF06325	PF06325	PrmA	PrmA	Q9WYV8	Q9WYV8	A	C
PF00243	PF00089	NGF	Trypsin	P00757	P01139	X	Y
PF03328	PF03328	HpcH_HpaI	HpcH_HpaI	Q9RUZ0	Q9RUZ0	B	A
PF01509	PF01509	TruB_N	TruB_N	P62190	P62190	B	A
PF00680	PF00680	RdRP_1	RdRP_1	Q70ET3	Q70ET3	B	A
PF01202	PF01202	SKI	SKI	P10880	P10880	B	A
PF00245	PF00245	Alk_phosphatase	Alk_phosphatase	Q9BHT8	Q9BHT8	B	A
PF00011	PF00011	HSP20	HSP20	Q57733	Q57733	C	A
PF07876	PF07876	Dabb	Dabb	Q9AR79	Q9AR79	B	A
PF00812	PF01404	Ephrin	Ephrin_lbd	O08543	P54763	A	B
PF01403	PF00089	Sema	Trypsin	P14210	P08581	A	B
PF00718	PF00718	Polyoma_coat	Polyoma_coat	P49302	P49302	B	C
PF00607	PF00969	Gag_p24	MHC_II_beta	P12495	P04229	C	B
PF00607	PF00993	Gag_p24	MHC_II_alpha	P12495	P01903	C	A
PF00435	PF00036	Spectrin	efhand	P05094	P05094	A	B
PF00435	PF00435	Spectrin	Spectrin	P05094	P05094	A	B
PF00307	PF00435	CH	Spectrin	P05094	P05094	B	A
PF03143	PF03143	GTP_EFTU_D3	GTP_EFTU_D3	P35021	P35021	B	A
PF00426	PF00426	VP4	VP4	Q91HI9	Q91HI9	E	F
PF00128	PF02903	Alpha-amylase	Alpha-amylase_N	O69007	O69007	B	A
PF02903	PF02903	Alpha-amylase_N	Alpha-amylase_N	O69007	O69007	A	B
PF02974	PF00413	Inh	Peptidase_M10	P23694	P18958	A	I
PF00575	PF00575	S1	S1	P21513	P21513	B	A
PF04563	PF04539	RNA_pol_Rpb2_1	Sigma70_r3	Q8RQE9	Q9WX78	C	F
PF01000	PF04983	RNA_pol_A_bac	RNA_pol_Rpb1_3	Q9Z9H6	Q8RQE8	B	D
PF04560	PF04539	RNA_pol_Rpb2_7	Sigma70_r3	Q8RQE9	Q9WX78	M	P
PF04997	PF04542	RNA_pol_Rpb1_1	Sigma70_r2	Q9WX78	Q8RQE8	F	D
PF04997	PF00140	RNA_pol_Rpb1_1	Sigma70_r1_2	Q9WX78	Q8RQE8	F	D
PF00562	PF04545	RNA_pol_Rpb2_6	Sigma70_r4	Q9WX78	Q8RQE9	P	M
PF04997	PF04545	RNA_pol_Rpb1_1	Sigma70_r4	Q9WX78	Q8RQE8	P	N
PF04997	PF04539	RNA_pol_Rpb1_1	Sigma70_r3	Q8RQE8	Q9WX78	D	F
PF00562	PF04539	RNA_pol_Rpb2_6	Sigma70_r3	Q8RQE9	Q9WX78	M	P
PF00623	PF04539	RNA_pol_Rpb1_2	Sigma70_r3	Q8RQE8	Q9WX78	D	F
PF00565	PF00565	SNase	SNase	P00644	P00644	B	A
PF00381	PF00381	PTS-HPr	PTS-HPr	P08877	P08877	B	A
PF01462	PF00092	LRRNT	VWA	P07359	P04275	B	A
PF00560	PF00092	LRR_1	VWA	P04275	P07359	A	B
PF00431	PF00431	CUB	CUB	P35495	P35496	A	B
PF03992	PF03992	ABM	ABM	Q99X56	Q99X56	B	A
PF02012	PF02012	BNR	BNR	Q8J0D2	Q8J0D2	A	B
PF00022	PF01290	Actin	Thymosin	O97428	P68135	B	A
PF02152	PF02152	FolB	FolB	Q9SF23	Q9SF23	P	L
PF04509	PF04509	CheC	CheC	Q9X1V3	Q9X1V3	B	A
PF00682	PF08502	HMGL-like	LeuA_dimer	P96420	P96420	B	A
PF08502	PF08502	LeuA_dimer	LeuA_dimer	P96420	P96420	A	B
PF02145	PF02145	Rap_GAP	Rap_GAP	P47736	P47736	C	B
PF00319	PF00319	SRF-TF	SRF-TF	P11831	P11831	B	A
PF03544	PF03544	TonB	TonB	P02929	P02929	B	A
PF00342	PF00342	PGI	PGI	P06745	P06745	B	A
PF00211	PF00211	Guanylate_cyc	Guanylate_cyc	P30803	P26769	A	B
PF00503	PF00211	G-alpha	Guanylate_cyc	P04896	P26769	C	B
PF03193	PF03193	DUF258	DUF258	Q9X242	Q9X242	A	C
PF07194	PF00072	P2	Response_reg	Q56310	Q56312	A	Y
PF03411	PF03411	Peptidase_M74	Peptidase_M74	P14007	P14007	E	F
PF00031	PF00112	Cystatin	Peptidase_C1	P00784	P04080	E	I
PF06184	PF06184	Potex_coat	Potex_coat	Q86993	Q86993	B	A
PF00045	PF00413	Hemopexin	Peptidase_M10	P03956	P03956	B	A
PF02198	PF02198	SAM_PNT	SAM_PNT	Q9I7G2	Q01842	D	B
PF01423	PF01423	LSM	LSM	Q9HUM0	Q9HUM0	B	A
PF07977	PF07977	FabA	FabA	Q9HXY7	Q9HXY7	B	A
PF01513	PF01513	NAD_kinase	NAD_kinase	O30297	O30297	B	A
PF01689	PF01689	Hyratase_decarb	Hyratase_decarb	P77608	P77608	E	C
PF00523	PF00523	Fusion_gly	Fusion_gly	P04849	P04849	B	A
PF06431	PF06431	Polyoma_lg_T_C	Polyoma_lg_T_C	P03070	P03070	B	C
PF00944	PF00944	Peptidase_S3	Peptidase_S3	P03316	P03316	B	A
PF01212	PF01212	Beta_elim_lyase	Beta_elim_lyase	O15839	O15839	B	A
PF01926	PF01926	MMR_HSR1	MMR_HSR1	P38424	P38424	B	A
PF04069	PF04069	OpuAC	OpuAC	O29280	O29280	A	B
PF04587	PF04587	ADP_PFK_GK	ADP_PFK_GK	O59355	O59355	A	B
PF07700	PF07700	HNOB	HNOB	Q8RBX6	Q8RBX6	A	B
PF04960	PF04960	Glutaminase	Glutaminase	P77454	P77454	C	D
PF06983	PF06983	3-dmu-9_3-mt	3-dmu-9_3-mt	Q9I0C1	Q9I0C1	C	D
PF07992	PF02852	Pyr_redox_2	Pyr_redox_dim	P18925	P18925	B	A
PF02852	PF02852	Pyr_redox_dim	Pyr_redox_dim	P18925	P18925	B	A
PF00296	PF00296	Bac_luciferase	Bac_luciferase	P12745	P12745	B	A
PF00373	PF00373	Band_41	Band_41	P35240	P35240	B	A
PF01740	PF01740	STAS	STAS	O32723	O32723	B	A
PF04548	PF04548	AIG1	AIG1	Q41009	Q41009	A	B
PF00532	PF00532	Peripla_BP_1	Peripla_BP_1	P46828	P46828	B	I
PF00878	PF00878	CIMR	CIMR	P08169	P08169	A	B
PF01067	PF00036	Calpain_III	efhand	Q07009	Q64537	A	B
PF02565	PF02565	RecO	RecO	Q9RW50	Q9RW50	A	B
PF04157	PF04132	EAP30	Vps36	Q06696	Q12483	B	A
PF05871	PF04132	ESCRT-II	Vps36	Q06696	P47142	B	C
PF04157	PF05871	EAP30	ESCRT-II	Q12483	P47142	A	C
PF00888	PF00097	Cullin	zf-C3HC4	Q13616	P62877	A	B
PF02747	PF00705	PCNA_C	PCNA_N	P12004	P12004	E	C
PF00129	PF00993	MHC_I	MHC_II_alpha	Q9TQB0	P30481	C	A
PF00069	PF00433	Pkinase	Pkinase_C	P00517	P00517	B	A
PF03972	PF03972	MmgE_PrpD	MmgE_PrpD	P77243	P77243	B	A
PF02784	PF02784	Orn_Arg_deC_N	Orn_Arg_deC_N	P07805	P07805	C	A
PF03166	PF03166	MH2	MH2	P84022	Q13485	A	B
PF02093	PF02093	Gag_p30	Gag_p30	P03336	P03336	B	C
PF02504	PF02504	FA_synthesis	FA_synthesis	Q82ZE8	Q82ZE8	A	B
PF07974	PF08441	EGF_2	Integrin_alpha2	P05106	P06756	B	A
PF07974	PF01839	EGF_2	FG-GAP	P05106	P06756	B	A
PF07965	PF08441	Integrin_B_tail	Integrin_alpha2	P06756	P05106	A	B
PF01839	PF00362	FG-GAP	Integrin_beta	P06756	P05106	A	B
PF01842	PF01842	ACT	ACT	Q9KQ45	Q9KQ45	B	A
PF03241	PF03241	HpaB	HpaB	P55792	P55792	D	B
PF00173	PF00173	Cyt-b5	Cyt-b5	P00171	P00171	C	A
PF00351	PF00351	Biopterin_H	Biopterin_H	P00439	P00439	B	A
PF00775	PF00775	Dioxygenase_C	Dioxygenase_C	P00436	P00437	E	Q
PF01558	PF01855	POR	POR_N	P94692	P94692	B	A
PF01855	PF01855	POR_N	POR_N	P94692	P94692	B	A
PF01855	PF02775	POR_N	TPP_enzyme_C	P94692	P94692	B	A
PF00503	PF00503	G-alpha	G-alpha	P04695	P04695	C	B
PF01653	PF01653	DNA_ligase_aden	DNA_ligase_aden	Q837V6	Q837V6	B	C
PF02969	PF02291	TAF	TFIID-31kDa	P49847	Q27272	B	A
PF07648	PF00089	Kazal_2	Trypsin	Q06684	P00735	R	H
PF02518	PF02518	HATPase_c	HATPase_c	P41148	P41148	B	A
PF00686	PF00686	CBM_20	CBM_20	P43379	P43379	B	A
PF00254	PF00036	FKBP_C	efhand	P62942	P63099	C	B
PF00254	PF00149	FKBP_C	Metallophos	P62942	P48452	C	A
PF00149	PF00036	Metallophos	efhand	P48452	P63099	A	B
PF02924	PF02924	HDPD	HDPD	P36275	P36275	D	C
PF01614	PF01614	IclR	IclR	P16528	P16528	D	B
PF00595	PF00089	PDZ	Trypsin	P31137	P31137	B	A
PF00457	PF00704	Glyco_hydro_11	Glyco_hydro_18	Q9HFH0	Q8L5C6	B	A
PF00310	PF00310	GATase_2	GATase_2	Q9I437	Q9I437	B	A
PF00059	PF00041	Lectin_C	fn3	P07897	Q05546	B	A
PF00200	PF00200	Disintegrin	Disintegrin	P83658	P83658	B	A
PF00875	PF00875	DNA_photolyase	DNA_photolyase	P05327	P05327	B	D
PF03441	PF03441	FAD_binding_7	FAD_binding_7	P05327	P05327	A	B
PF01468	PF00273	GA	Serum_albumin	Q51911	P02768	B	A
PF00759	PF00759	Glyco_hydro_9	Glyco_hydro_9	P26221	P26221	A	B
PF02902	PF02902	Peptidase_C48	Peptidase_C48	Q9HC62	Q9HC62	B	A
PF00514	PF00514	Arm	Arm	P35222	P35222	B	A
PF02518	PF01740	HATPase_c	STAS	O32726	O32727	B	A
PF02902	PF00240	Peptidase_C48	ubiquitin	P63165	Q9HC62	B	A
PF02273	PF02273	Acyl_transf_2	Acyl_transf_2	P05521	P05521	B	A
PF05738	PF00384	Cna_B	Molybdopterin	P80564	P80563	D	C
PF05738	PF05738	Cna_B	Cna_B	P80564	P80564	H	B
PF01375	PF06453	Enterotoxin_a	LT-IIB	P43529	P43528	G	A
PF01375	PF01375	Enterotoxin_a	Enterotoxin_a	P43528	P43528	A	C
PF01258	PF01258	zf-dskA_traR	zf-dskA_traR	P18274	P18274	D	B
PF01218	PF01218	Coprogen_oxidas	Coprogen_oxidas	P11353	P11353	B	A
PF02676	PF02676	DUF207	DUF207	Q9UX16	Q9UX16	B	A
PF00667	PF00258	FAD_binding_1	Flavodoxin_1	P29476	P29476	A	B
PF00667	PF00667	FAD_binding_1	FAD_binding_1	P29476	P29476	A	B
PF02675	PF02675	AdoMet_dc	AdoMet_dc	Q9WZC3	Q9WZC3	B	A
PF05544	PF05544	Pro_racemase	Pro_racemase	Q8YFD6	Q8YFD6	B	A
PF02223	PF02223	Thymidylate_kin	Thymidylate_kin	P00572	P00572	B	A
PF00128	PF00234	Alpha-amylase	Tryp_alpha_amyl	P56634	P01087	A	B
PF02590	PF02590	DUF163	DUF163	Q45601	Q45601	C	A
PF02983	PF02983	Pro_Al_protease	Pro_Al_protease	P00778	P00778	A	B
PF02867	PF00317	Ribonuc_red_lgC	Ribonuc_red_lgN	P00452	P00452	A	B
PF00229	PF00020	TNF	TNFR_c6	P19438	P01374	R	A
PF02595	PF02595	Gly_kinase	Gly_kinase	P57098	P57098	A	B
PF05049	PF05049	IIGP	IIGP	Q9QZ85	Q9QZ85	B	A
PF00582	PF00582	Usp	Usp	O06153	O06153	C	A
PF02275	PF02275	CBAH	CBAH	P12256	P12256	D	B
PF02321	PF02321	OEP	OEP	P02930	P02930	B	C
PF01849	PF01849	NAC	NAC	O26279	O26279	A	B
PF03275	PF03275	GLF	GLF	O06934	O06934	A	C
PF01220	PF01220	DHquinase_II	DHquinase_II	P15474	P15474	G	H
PF00870	PF00870	P53	P53	P04637	P04637	A	B
PF00519	PF00519	PPV_E1_C	PPV_E1_C	P06789	P06789	H	A
PF06463	PF06463	Mob_synth_C	Mob_synth_C	P65388	P65388	A	B
PF02876	PF02876	Stap_Strp_tox_C	Stap_Strp_tox_C	Q9ZFS5	Q9ZFS5	A	B
PF01789	PF01789	PsbP	PsbP	P18212	P18212	B	A
PF00423	PF00423	HN	HN	Q81080	Q81080	B	A
PF01747	PF01747	ATP-sulfurylase	ATP-sulfurylase	Q5SKH7	Q8KZ96	B	A
PF03144	PF03143	GTP_EFTU_D2	GTP_EFTU_D3	Q01698	Q01698	B	C
PF03144	PF03144	GTP_EFTU_D2	GTP_EFTU_D2	Q01698	Q01698	A	B
PF00009	PF03144	GTP_EFTU	GTP_EFTU_D2	Q01698	Q01698	B	C
PF00871	PF00871	Acetate_kinase	Acetate_kinase	P38502	P38502	B	A
PF03447	PF03447	NAD_binding_3	NAD_binding_3	P31116	P31116	A	B
PF00891	PF00891	Methyltransf_2	Methyltransf_2	Q06528	Q06528	B	A
PF04997	PF03871	RNA_pol_Rpb1_1	RNA_pol_Rpb5_N	P20434	P04050	E	A
PF04997	PF01191	RNA_pol_Rpb1_1	RNA_pol_Rpb5_C	P04050	P20434	A	E
PF03932	PF03932	CutC	CutC	P67825	P67825	B	A
PF00809	PF00809	Pterin_bind	Pterin_bind	Q81VW8	Q81VW8	B	A
PF00708	PF00708	Acylphosphatase	Acylphosphatase	P84142	P84142	B	A
PF07973	PF07973	tRNA_SAD	tRNA_SAD	O58307	O58307	C	B
PF02350	PF02350	Epimerase_2	Epimerase_2	P83824	P83824	B	A
PF01920	PF02996	KE2	Prefoldin	O27646	O26774	C	B
PF00714	PF07140	IFN-gamma	IFNGR1	P15260	P01579	E	A
PF02964	PF02332	MeMO_Hyd_G	Phenol_Hydrox	P18798	P11987	C	E
PF00907	PF00907	T-box	T-box	O15119	O15119	B	A
PF02348	PF02348	CTP_transf_3	CTP_transf_3	P42216	P42216	B	A
PF01353	PF01353	GFP	GFP	P42212	P42212	C	A
PF07479	PF01210	NAD_Gly3P_dh_C	NAD_Gly3P_dh_N	O29390	O29390	B	A
PF07479	PF07479	NAD_Gly3P_dh_C	NAD_Gly3P_dh_C	O29390	O29390	B	A
PF04349	PF04349	MdoG	MdoG	P33136	P33136	A	B
PF08540	PF01154	HMG_CoA_synt_C	HMG_CoA_synt_N	Q9FD87	Q9FD87	D	C
PF08540	PF08540	HMG_CoA_synt_C	HMG_CoA_synt_C	Q9FD87	Q9FD87	D	C
PF01154	PF01154	HMG_CoA_synt_N	HMG_CoA_synt_N	Q9FD87	Q9FD87	B	C
PF01839	PF01839	FG-GAP	FG-GAP	P08514	P08514	E	A
PF05690	PF05690	ThiG	ThiG	O31618	O31618	C	A
PF03786	PF03786	UxuA	UxuA	Q82ZC9	Q82ZC9	B	A
PF01571	PF01571	GCV_T	GCV_T	O58888	O58888	A	B
PF00697	PF00697	PRAI	PRAI	P83825	P83825	A	B
PF00331	PF00652	Glyco_hydro_10	Ricin_B_lectin	Q7SI98	Q7SI98	B	A
PF00652	PF00652	Ricin_B_lectin	Ricin_B_lectin	Q7SI98	Q7SI98	A	B
PF00694	PF00694	Aconitase_C	Aconitase_C	O59393	O59393	B	A
PF00758	PF00758	EPO_TPO	EPO_TPO	P40225	P40225	Y	Z
PF00059	PF00092	Lectin_C	VWA	P17301	Q7T2Q0	C	B
PF03360	PF03360	Glyco_transf_43	Glyco_transf_43	Q9P2W7	Q9P2W7	B	A
PF04379	PF04379	DUF525	DUF525	Q8EB92	Q8EB92	B	A
PF03770	PF03770	IPK	IPK	P17105	P17105	B	A
PF03495	PF03495	Binary_toxB	Binary_toxB	P13423	P13423	C	O
PF01029	PF01029	NusB	NusB	Q9X286	Q9X286	B	A
PF01255	PF01255	Prenyltransf	Prenyltransf	P60472	P60472	A	B
PF05221	PF00670	AdoHcyase	AdoHcyase_NAD	P50250	P50250	C	D
PF00670	PF00670	AdoHcyase_NAD	AdoHcyase_NAD	P50250	P50250	C	A
PF05221	PF05221	AdoHcyase	AdoHcyase	P50250	P50250	D	C
PF02597	PF02597	ThiS	ThiS	P83826	P83826	C	D
PF04260	PF04260	DUF436	DUF436	Q72L49	Q72L49	B	C
PF02569	PF02569	Pantoate_ligase	Pantoate_ligase	P83701	P83701	B	A
PF02885	PF00591	Glycos_trans_3N	Glycos_transf_3	P83827	P83827	B	A
PF02885	PF02885	Glycos_trans_3N	Glycos_trans_3N	P83827	P83827	B	A
PF01850	PF01850	PIN	PIN	Q8ZUJ3	Q8ZUJ3	D	F
PF01016	PF01016	Ribosomal_L27	Ribosomal_L27	P84123	P84123	A	B
PF02181	PF02181	FH2	FH2	O08808	O08808	A	B
PF00057	PF00073	Ldl_recept_a	Rhv	P04936	P98155	1	5
PF00071	PF01833	Ras	TIG	O54921	P11233	C	B
PF01351	PF01351	RNase_HII	RNase_HII	O59351	O59351	B	A
PF02452	PF02452	PemK	PemK	P33645	P33645	A	B
PF02452	PF04014	PemK	SpoVT_AbrB	P33645	P18534	A	C
PF08545	PF08545	ACP_syn_III	ACP_syn_III	Q7SI99	Q7SI99	D	C
PF08541	PF08541	ACP_syn_III_C	ACP_syn_III_C	Q7SI99	Q7SI99	A	D
PF01979	PF00699	Amidohydro_1	Urease_beta	P41021	P41020	B	C
PF01139	PF01139	UPF0027	UPF0027	O59245	O59245	B	A
PF02286	PF02288	Dehydratase_LU	Dehydratase_MU	Q59470	Q59471	L	B
PF02286	PF02287	Dehydratase_LU	Dehydratase_SU	Q59470	Q59472	L	M
PF02286	PF02286	Dehydratase_LU	Dehydratase_LU	Q59470	Q59470	L	A
PF02288	PF02287	Dehydratase_MU	Dehydratase_SU	Q59471	Q59472	B	G
PF08443	PF08443	RimK	RimK	Q84BR0	Q84BR0	B	A
PF00445	PF00445	Ribonuclease_T2	Ribonuclease_T2	P23540	P23540	B	A
PF00012	PF00012	HSP70	HSP70	P63018	P63018	D	C
PF00705	PF00705	PCNA_N	PCNA_N	Q975N2	Q975N2	B	C
PF00485	PF00485	PRK	PRK	Q9BZX2	Q9BZX2	B	A
PF00413	PF00965	Peptidase_M10	TIMP	P01033	P08254	D	C
PF08207	PF08207	EFP_N	EFP_N	Q76G20	Q76G20	B	A
PF07124	PF07124	Phytoreo_P8	Phytoreo_P8	P17379	P17379	E	J
PF01121	PF01121	CoaE	CoaE	Q56416	Q56416	C	B
PF05168	PF05168	HEPN	HEPN	P83963	P83963	D	C
PF00543	PF00543	P-II	P-II	P83820	P83820	C	B
PF02979	PF02211	NHase_alpha	NHase_beta	Q7SID3	Q7SID2	B	A
PF02261	PF02261	Asp_decarbox	Asp_decarbox	P56065	P56065	A	B
PF01564	PF01564	Spermine_synth	Spermine_synth	P83816	P83816	A	B
PF00496	PF00496	SBP_bac_5	SBP_bac_5	P33590	P33590	A	B
PF00463	PF00463	ICL	ICL	Q56062	Q56062	B	C
PF02877	PF02877	PARP_reg	PARP_reg	P09874	P09874	A	B
PF00644	PF02877	PARP	PARP_reg	P09874	P09874	B	A
PF02985	PF00010	HEAT	HLH	Q12772	P70168	E	B
PF00996	PF00071	GDI	Ras	P01123	P39958	Y	G
PF00355	PF00848	Rieske	Ring_hydroxyl_A	Q53122	Q53122	C	A
PF00848	PF00848	Ring_hydroxyl_A	Ring_hydroxyl_A	Q53122	Q53122	C	E
PF00848	PF00866	Ring_hydroxyl_A	Ring_hydroxyl_B	Q53122	Q53123	C	D
PF00355	PF00866	Rieske	Ring_hydroxyl_B	Q53122	Q53123	E	B
PF00866	PF00866	Ring_hydroxyl_B	Ring_hydroxyl_B	Q53123	Q53123	B	D
PF05204	PF05203	Hom_end	Hom_end_hint	P17255	P17255	B	A
PF00006	PF05203	ATP-synt_ab	Hom_end_hint	P17255	P17255	B	A
PF00006	PF05204	ATP-synt_ab	Hom_end	P17255	P17255	A	B
PF05204	PF05204	Hom_end	Hom_end	P17255	P17255	B	A
PF00676	PF02780	E1_dh	Transketolase_C	P84130	P84129	B	C
PF00676	PF00676	E1_dh	E1_dh	P84129	P84129	C	A
PF00717	PF00717	Peptidase_S24	Peptidase_S24	P04153	P04153	B	A
PF02574	PF02574	S-methyl_trans	S-methyl_trans	O09171	O09171	D	C
PF00722	PF06955	Glyco_hydro_16	XET_C	Q8GZD5	Q8GZD5	B	A
PF00722	PF00722	Glyco_hydro_16	Glyco_hydro_16	Q8GZD5	Q8GZD5	B	A
PF02733	PF02734	Dak1	Dak2	P45510	P45510	B	A
PF01320	PF01320	Colicin_Pyocin	Colicin_Pyocin	Q03708	Q03708	D	B
PF04857	PF04857	CAF1	CAF1	P39008	P39008	B	A
PF00073	PF00084	Rhv	Sushi	P08174	Q8JKE8	E	C
PF00982	PF00982	Glyco_transf_20	Glyco_transf_20	P31677	P31677	B	A
PF07745	PF07745	Glyco_hydro_53	Glyco_hydro_53	Q65CX5	Q65CX5	B	A
PF01756	PF02770	ACOX	Acyl-CoA_dh_M	O65202	O65202	A	B
PF01756	PF01756	ACOX	ACOX	O65202	O65202	A	B
PF00581	PF00581	Rhodanese	Rhodanese	P31142	P31142	B	A
PF00747	PF00747	Viral_DNA_bp	Viral_DNA_bp	P04296	P04296	B	A
PF03234	PF02518	CDC37	HATPase_c	P02829	Q16543	A	B
PF02463	PF02463	SMC_N	SMC_N	P58301	P58301	A	B
PF04619	PF04619	Adhesin_Dr	Adhesin_Dr	P24093	P24093	A	C
PF02365	PF02365	NAM	NAM	Q9C932	Q9C932	B	A
PF00231	PF00006	ATP-synt	ATP-synt_ab	P19483	P05631	C	G
PF00231	PF00306	ATP-synt	ATP-synt_ab_C	P00829	P05631	E	G
PF01108	PF00089	Tissue_fac	Trypsin	P08709	P13726	H	T
PF00594	PF01108	Gla	Tissue_fac	P13726	P08709	T	L
PF00008	PF01108	EGF	Tissue_fac	P13726	P08709	T	L
PF00962	PF00930	A_deaminase	DPPIV_N	P56658	P27487	H	D
PF00221	PF00221	PAL	PAL	P24481	P24481	B	A
PF00183	PF00183	HSP90	HSP90	P02829	P02829	E	A
PF01634	PF01634	HisG	HisG	Q9X0D2	Q9X0D2	H	G
PF03466	PF03466	LysR_substrate	LysR_substrate	Q7WT50	Q7WT50	A	B
PF01394	PF01394	Clathrin_propel	Clathrin_propel	P49951	P49951	B	A
PF04514	PF04514	BTV_NS2	BTV_NS2	P23065	P23065	B	A
PF00193	PF00193	Xlink	Xlink	P16070	P16070	B	A
PF08513	PF08513	LisH	LisH	P63005	P63005	A	B
PF02931	PF02931	Neur_chan_LBD	Neur_chan_LBD	P58154	P58154	H	I
PF04612	PF04612	GspM	GspM	P41851	P41851	B	A
PF01175	PF01175	Urocanase	Urocanase	P25080	P25080	A	B
PF04824	PF02463	Rad21_Rec8	SMC_N	P32908	Q12158	C	G
PF00331	PF00331	Glyco_hydro_10	Glyco_hydro_10	P14768	P14768	B	A
PF01179	PF02727	Cu_amine_oxid	Cu_amine_oxidN2	Q43077	Q43077	B	D
PF04257	PF00580	Exonuc_V_gamma	UvrD-helicase	P08394	P07648	B	C
PF00701	PF00701	DHDPS	DHDPS	O54288	O54288	D	B
PF00234	PF00234	Tryp_alpha_amyl	Tryp_alpha_amyl	P23096	P23096	B	A
PF00993	PF02072	MHC_II_alpha	Orexin	P01907	O43612	A	C
PF00969	PF02072	MHC_II_beta	Orexin	O43612	P03992	C	B
PF02854	PF03467	MIF4G	Smg4_UPF3	Q9HAU5	Q9BZI7	B	A
PF02854	PF02854	MIF4G	MIF4G	Q9HAU5	Q9HAU5	B	D
PF02121	PF02121	IP_trans	IP_trans	Q00169	Q00169	B	A
PF00101	PF00101	RuBisCO_small	RuBisCO_small	P00873	P00873	P	M
PF03422	PF03422	CBM_6	CBM_6	O07653	O07653	B	A
PF00265	PF00265	TK	TK	P04183	P04183	D	C
PF03953	PF03953	Tubulin_C	Tubulin_C	Q57816	Q57816	F	I
PF00447	PF00447	HSF_DNA-bind	HSF_DNA-bind	P22121	P22121	A	B
PF05367	PF05367	Phage_endo_I	Phage_endo_I	P00641	P00641	B	A
PF00179	PF00179	UQ_con	UQ_con	P21734	P21734	B	A
PF01119	PF02518	DNA_mis_repair	HATPase_c	P54278	P54278	B	A
PF01180	PF00037	DHO_dh	Fer4	Q28943	Q28943	C	D
PF00231	PF04627	ATP-synt	ATP-synt_Eps	P05632	P05631	I	G
PF02823	PF04627	ATP-synt_DE_N	ATP-synt_Eps	P05632	P05630	I	H
PF00401	PF04627	ATP-synt_DE	ATP-synt_Eps	P05632	P05630	I	H
PF00231	PF02823	ATP-synt	ATP-synt_DE_N	P05631	P05630	G	H
PF01473	PF01473	CW_binding_1	CW_binding_1	P06653	P06653	B	A
PF00040	PF00040	fn2	fn2	P02784	P02784	A	B
PF02312	PF00853	CBF_beta	Runt	Q13951	Q01196	B	A
PF02312	PF02312	CBF_beta	CBF_beta	Q13951	Q13951	B	D
PF03051	PF03051	Peptidase_C1_2	Peptidase_C1_2	Q13867	Q13867	B	A
PF07415	PF00129	Herpes_LMP2	MHC_I	P13285	P03989	C	A
PF08244	PF08244	Glyco_hydro_32C	Glyco_hydro_32C	O33833	O33833	E	A
PF00251	PF00251	Glyco_hydro_32N	Glyco_hydro_32N	O33833	O33833	C	B
PF08244	PF00251	Glyco_hydro_32C	Glyco_hydro_32N	O33833	O33833	C	A
PF03893	PF01764	Lipase3_N	Lipase_3	O42807	O42807	B	A
PF01764	PF01764	Lipase_3	Lipase_3	O42807	O42807	A	B
PF01454	PF07686	MAGE	V-set	Q6NS96	P43355	M	F
PF00129	PF07686	MHC_I	V-set	Q6NS96	P30443	M	D
PF01454	PF00129	MAGE	MHC_I	P43355	P30443	C	A
PF02817	PF02780	E3_binding	Transketolase_C	P21874	P11961	D	I
PF04427	PF04427	Brix	Brix	O26776	O26776	B	A
PF00128	PF00129	Alpha-amylase	MHC_I	P38158	P01901	P	A
PF01135	PF01135	PCMT	PCMT	Q972K9	Q972K9	D	C
PF00218	PF00218	IGPS	IGPS	P84126	P84126	B	A
PF02310	PF01642	B12-binding	MM_CoA_mutase	P11653	P11652	C	B
PF02132	PF02132	RecR	RecR	Q9ZNA2	Q9ZNA2	D	B
PF01266	PF01266	DAO	DAO	P00371	P00371	A	B
PF00033	PF00033	Cytochrom_B_N	Cytochrom_B_N	P83791	P83791	N	A
PF01333	PF03742	Apocytochr_F_C	PetN	P83793	P83798	C	H
PF08041	PF03742	PetM	PetN	P83798	P83796	H	F
PF02529	PF03742	PetG	PetN	P83798	P83797	H	G
PF00032	PF08041	Cytochrom_B_C	PetM	P83792	P83796	O	S
PF00689	PF00122	Cation_ATPase_C	E1-E2_ATPase	P04191	P04191	B	A
PF00689	PF00689	Cation_ATPase_C	Cation_ATPase_C	P04191	P04191	B	A
PF00996	PF00996	GDI	GDI	P37727	P37727	E	G
PF01458	PF01458	UPF0051	UPF0051	P77689	P77689	B	A
PF08359	PF00440	TetR_C_4	TetR_N	P94548	P94548	B	A
PF08359	PF08359	TetR_C_4	TetR_C_4	P94548	P94548	A	B
PF02664	PF02664	LuxS	LuxS	Q9RRU8	Q9RRU8	A	B
PF01081	PF01081	Aldolase	Aldolase	P44480	P44480	C	E
PF02905	PF02905	EBV-NA1	EBV-NA1	P03211	P03211	B	A
PF01590	PF01590	GAF	GAF	P76270	P76270	B	A
PF03652	PF03652	UPF0081	UPF0081	O34634	O34634	B	A
PF00318	PF00318	Ribosomal_S2	Ribosomal_S2	O29132	O29132	B	A
PF01380	PF01380	SIS	SIS	O28478	O28478	D	B
PF00849	PF01479	PseudoU_synth_2	S4	P45124	P45124	B	A
PF00849	PF00849	PseudoU_synth_2	PseudoU_synth_2	P45124	P45124	A	B
PF01884	PF01884	PcrB	PcrB	O34790	O34790	B	A
PF02577	PF02577	DUF151	DUF151	Q9WY07	Q9WY07	B	A
PF01910	PF01910	DUF77	DUF77	Q9WYV6	Q9WYV6	D	B
PF04321	PF04321	RmlD_sub_bind	RmlD_sub_bind	Q97GQ1	Q97GQ1	C	B
PF04041	PF04041	DUF377	DUF377	Q9X0V2	Q9X0V2	B	A
PF04309	PF04309	G3P_antiterm	G3P_antiterm	Q9X1F0	Q9X1F0	C	D
PF04073	PF04073	YbaK	YbaK	Q8U9M7	Q8U9M7	B	A
PF04227	PF04227	Indigoidine_A	Indigoidine_A	Q9X1H5	Q9X1H5	B	D
PF04371	PF04371	PAD_porph	PAD_porph	Q8GWW7	Q8GWW7	B	A
PF01071	PF01071	GARS_A	GARS_A	Q9X0X7	Q9X0X7	A	B
PF00764	PF00764	Arginosuc_synth	Arginosuc_synth	Q9X2A1	Q9X2A1	B	A
PF01523	PF01523	PmbA_TldD	PmbA_TldD	Q9WZI6	Q9WZI6	A	B
PF03949	PF03949	Malic_M	Malic_M	Q9WZ12	Q9WZ12	C	B
PF00384	PF01568	Molybdopterin	Molydop_binding	P80563	P80563	U	Q
PF08241	PF08241	Methyltransf_11	Methyltransf_11	Q9X119	Q9X119	B	A
PF04095	PF04095	NAPRTase	NAPRTase	P39683	P39683	B	A
PF05652	PF05652	DcpS	DcpS	Q9DAR7	Q9DAR7	B	A
PF01113	PF01113	DapB_N	DapB_N	Q9X1K8	Q9X1K8	B	A
PF00258	PF00753	Flavodoxin_1	Lactamase_B	Q9WZL4	Q9WZL4	A	B
PF00258	PF00258	Flavodoxin_1	Flavodoxin_1	Q9WZL4	Q9WZL4	A	B
PF01894	PF01894	UPF0047	UPF0047	Q9K772	Q9K772	B	A
PF03762	PF03762	VOMI	VOMI	P41366	P41366	B	A
PF00239	PF00239	Resolvase	Resolvase	P03012	P03012	B	A
PF00352	PF00382	TBP	TFIIB	Q00403	P28147	A	B
PF02609	PF02609	Exonuc_VII_S	Exonuc_VII_S	Q7VV85	Q7W7Q2	D	C
PF04051	PF04051	TRAPP_Bet3	TRAPP_Bet3	O55013	O55013	B	A
PF05683	PF05683	Fumerase_C	Fumerase_C	O29167	O29167	B	A
PF02645	PF02645	DegV	DegV	Q9X1H9	Q9X1H9	B	A
PF02599	PF02599	CsrA	CsrA	O69078	O69078	B	A
PF01430	PF01430	HSP33	HSP33	Q9X1B4	Q9X1B4	B	A
PF07978	PF07978	NIPSNAP	NIPSNAP	Q8U857	Q8U857	C	D
PF05790	PF07679	C2-set	I-set	P19320	P19320	B	A
PF05790	PF05790	C2-set	C2-set	P19320	P19320	A	B
PF00913	PF00913	Trypan_glycop	Trypan_glycop	P26332	P26332	B	A
PF01845	PF01845	CcdB	CcdB	P62554	P62554	D	C
PF02747	PF02747	PCNA_C	PCNA_C	P12004	P12004	A	K
PF00774	PF00774	Ca_channel_B	Ca_channel_B	P54287	P54287	B	A
PF01960	PF01960	ArgJ	ArgJ	Q53940	Q53940	B	A
PF06397	PF01880	Desulfoferrod_N	Desulfoferrodox	Q46495	Q46495	B	A
PF06397	PF06397	Desulfoferrod_N	Desulfoferrod_N	Q46495	Q46495	B	A
PF01880	PF01880	Desulfoferrodox	Desulfoferrodox	Q46495	Q46495	A	B
PF00594	PF00594	Gla	Gla	Q800Y1	Q800Y1	C	B
PF03528	PF03528	Rabaptin	Rabaptin	Q15276	Q15276	B	C
PF03127	PF03528	GAT	Rabaptin	Q15276	Q9UJY5	B	A
PF00588	PF00588	SpoU_methylase	SpoU_methylase	Q9F5K6	Q9F5K6	B	A
PF00071	PF00621	Ras	RhoGEF	P61586	Q9NZN5	D	C
PF04962	PF04962	KduI	KduI	Q46938	Q46938	C	E
PF07367	PF07367	FB_lectin	FB_lectin	Q8WZC9	Q8WZC9	B	A
PF03414	PF03414	Glyco_transf_6	Glyco_transf_6	P14769	P14769	A	B
PF03378	PF00071	CAS_CSE1	Ras	P33307	P62825	C	A
PF00514	PF03378	Arm	CAS_CSE1	P33307	Q02821	C	B
PF01749	PF03810	IBB	IBN_N	P33307	Q02821	C	B
PF08506	PF01749	Cse1	IBB	Q02821	P33307	B	C
PF08506	PF00071	Cse1	Ras	P33307	P62825	C	A
PF00514	PF08506	Arm	Cse1	P33307	Q02821	C	B
PF00009	PF00009	GTP_EFTU	GTP_EFTU	Q8J307	Q8J307	B	D
PF00509	PF00129	Hemagglutinin	MHC_I	P01899	P26140	A	C
PF00603	PF00129	Flu_PA	MHC_I	P01899	Q8QLZ6	A	C
PF01601	PF01601	Corona_S2	Corona_S2	P11224	P11224	B	A
PF00378	PF00108	ECH	Thiolase_N	P28790	P28793	C	B
PF02737	PF00108	3HCDH_N	Thiolase_N	P28790	P28793	C	A
PF00725	PF00108	3HCDH	Thiolase_N	P28790	P28793	C	A
PF03372	PF03372	Exo_endo_phos	Exo_endo_phos	Q93139	Q93139	B	A
PF00118	PF00118	Cpn60_TCP1	Cpn60_TCP1	P61490	P61490	A	H
PF00166	PF00118	Cpn10	Cpn60_TCP1	P61490	P61492	A	O
PF00082	PF00720	Peptidase_S8	SSI	P01006	P00782	I	E
PF00517	PF00517	GP41	GP41	Q87973	Q87973	E	F
PF00111	PF00175	Fer2	NAD_binding_1	P27787	Q9SLP6	B	C
PF00531	PF00531	Death	Death	Q8K1S3	Q8K1S3	B	A
PF00480	PF00480	ROK	ROK	Q7WT42	Q7WT42	B	A
PF02630	PF02630	SCO1-SenC	SCO1-SenC	O75880	O75880	B	A
PF00270	PF00271	DEAD	Helicase_C	Q8TZH8	Q8TZH8	D	E
PF01966	PF01966	HD	HD	P76491	P76491	B	A
PF01227	PF01227	GTP_cyclohydroI	GTP_cyclohydroI	P22288	P22288	A	E
PF06399	PF01227	GFRP	GTP_cyclohydroI	P22288	P70552	A	L
PF06399	PF06399	GFRP	GFRP	P70552	P70552	Q	R
PF01368	PF02833	DHH	DHHA2	P37487	P37487	A	B
PF01368	PF01368	DHH	DHH	P37487	P37487	A	B
PF00071	PF00616	Ras	RasGAP	P20936	P01112	G	R
PF02298	PF02298	Cu_bind_like	Cu_bind_like	P80728	P80728	B	A
PF03271	PF03271	EB1	EB1	Q15691	Q15691	B	A
PF00923	PF00923	Transaldolase	Transaldolase	Q5SJE8	Q5SJE8	D	H
PF02277	PF02277	DBI_PRT	DBI_PRT	Q7SIC7	Q7SIC7	B	A
PF04131	PF04131	NanE	NanE	P65517	P65517	A	B
PF05638	PF05638	DUF796	DUF796	Q9I747	Q9I747	A	C
PF01451	PF01451	LMWPc	LMWPc	O28910	O28910	B	A
PF04560	PF03876	RNA_pol_Rpb2_7	RNA_pol_Rpb7_N	P08518	P34087	B	G
PF04565	PF01096	RNA_pol_Rpb2_3	TFIIS_C	P08518	P07273	B	S
PF04983	PF01096	RNA_pol_Rpb1_3	TFIIS_C	P07273	P04050	S	A
PF04992	PF01096	RNA_pol_Rpb1_6	TFIIS_C	P07273	P04050	S	A
PF00562	PF01096	RNA_pol_Rpb2_6	TFIIS_C	P07273	P08518	S	B
PF00623	PF01096	RNA_pol_Rpb1_2	TFIIS_C	P07273	P04050	S	A
PF03871	PF07500	RNA_pol_Rpb5_N	TFIIS_M	P07273	P20434	S	E
PF04998	PF07500	RNA_pol_Rpb1_5	TFIIS_M	P07273	P04050	S	A
PF04990	PF07500	RNA_pol_Rpb1_7	TFIIS_M	P07273	P04050	S	A
PF01192	PF03876	RNA_pol_Rpb6	RNA_pol_Rpb7_N	P34087	P20435	G	F
PF00623	PF03876	RNA_pol_Rpb1_2	RNA_pol_Rpb7_N	P34087	P04050	G	A
PF01230	PF01230	HIT	HIT	O07513	O07513	E	C
PF01749	PF03803	IBB	Scramblase	P52293	O15162	C	P
PF00514	PF03803	Arm	Scramblase	O15162	P52293	P	C
PF01906	PF01906	DUF74	DUF74	Q83LS2	Q83LS2	E	A
PF00753	PF00753	Lactamase_B	Lactamase_B	P54548	P54548	B	A
PF03781	PF03781	DUF323	DUF323	Q8NBJ7	Q8NBJ7	B	A
PF00022	PF02181	Actin	FH2	P41832	P68135	B	A
PF04616	PF04616	Glyco_hydro_43	Glyco_hydro_43	Q97DM1	Q97DM1	B	A
PF00574	PF00574	CLP_protease	CLP_protease	P63788	P63788	G	A
PF00929	PF00929	Exonuc_X-T	Exonuc_X-T	Q9BQ50	Q9BQ50	B	A
PF00009	PF00627	GTP_EFTU	UBA	P43896	P49410	B	A
PF00889	PF00009	EF_TS	GTP_EFTU	P49410	P43896	A	B
PF00889	PF03143	EF_TS	GTP_EFTU_D3	P49410	P43896	A	B
PF02629	PF06971	CoA_binding	Put_DNA-bind_N	Q9X2V5	Q9X2V5	E	A
PF02629	PF02629	CoA_binding	CoA_binding	Q9X2V5	Q9X2V5	E	F
PF06971	PF06971	Put_DNA-bind_N	Put_DNA-bind_N	Q9X2V5	Q9X2V5	C	D
PF01088	PF00240	Peptidase_C12	ubiquitin	P62988	P15374	D	C
PF01088	PF01088	Peptidase_C12	Peptidase_C12	P15374	P15374	C	A
PF00617	PF00617	RasGEF	RasGEF	Q07889	Q07889	B	A
PF01453	PF01453	B_lectin	B_lectin	Q9SWS5	Q9SWS5	D	A
PF01324	PF00008	Diphtheria_R	EGF	P00588	Q99075	T	R
PF06172	PF06172	Cupin_5	Cupin_5	Q03629	Q03629	C	B
PF07686	PF00047	V-set	ig	P01833	P01833	A	F
PF00375	PF00375	SDF	SDF	O59010	O59010	B	C
PF05343	PF05343	Peptidase_M42	Peptidase_M42	O59196	O59196	C	B
PF08327	PF08327	AHSA1	AHSA1	Q82XK1	Q82XK1	B	A
PF05362	PF05362	Lon_C	Lon_C	Q58812	Q58812	B	A
PF03175	PF03175	DNA_pol_B_2	DNA_pol_B_2	P03680	P03680	A	B
PF02581	PF02581	TMP-TENI	TMP-TENI	Q8U192	Q8U192	B	A
PF00637	PF00637	Clathrin	Clathrin	P49951	P49951	A	F
PF00720	PF00089	SSI	Trypsin	P00760	P01006	E	I
PF00261	PF00261	Tropomyosin	Tropomyosin	P58772	P58772	B	A
PF02983	PF00089	Pro_Al_protease	Trypsin	P00778	P00778	B	D
PF00191	PF00191	Annexin	Annexin	P07355	P07355	A	B
PF00189	PF00163	Ribosomal_S3_C	Ribosomal_S4	P80373	P80372	D	C
PF00731	PF00731	AIRC	AIRC	Q81ZH8	Q81ZH8	D	E
PF02114	PF00400	Phosducin	WD40	P62871	P20942	B	P
PF00318	PF00189	Ribosomal_S2	Ribosomal_S3_C	P80371	P80372	B	C
PF01787	PF01787	Ilar_coat	Ilar_coat	P24264	P24264	D	C
PF02166	PF00104	Androgen_recep	Hormone_recep	P10275	P10275	B	A
PF07943	PF00768	PBP5_C	Peptidase_S11	Q8DQ99	Q8DQ99	D	A
PF07943	PF07943	PBP5_C	PBP5_C	Q8DQ99	Q8DQ99	C	A
PF00768	PF00768	Peptidase_S11	Peptidase_S11	Q8DQ99	Q8DQ99	A	B
PF02493	PF02493	MORN	MORN	Q8WTS6	Q8WTS6	E	A
PF04223	PF04223	CitF	CitF	Q8ZRY1	Q8ZRY1	B	A
PF03162	PF03162	Y_phosphatase2	Y_phosphatase2	Q9ZVN4	Q9ZVN4	B	A
PF01055	PF01055	Glyco_hydro_31	Glyco_hydro_31	P31434	P31434	B	C
PF04115	PF04115	Ureidogly_hydro	Ureidogly_hydro	P77731	P77731	A	B
PF03306	PF03306	AAL_decarboxy	AAL_decarboxy	Q7A3A7	Q7A3A7	C	D
PF07554	PF01468	FIVAR	GA	Q8NWQ6	Q8NWQ6	B	A
PF00007	PF00560	Cys_knot	LRR_1	P01225	P23945	B	C
PF00007	PF01462	Cys_knot	LRRNT	P01225	P23945	B	C
PF00236	PF00560	Hormone_6	LRR_1	P23945	P01215	C	A
PF02221	PF02221	E1_DerP2_DerF2	E1_DerP2_DerF2	Q00855	Q00855	B	A
PF03974	PF03974	Ecotin	Ecotin	P23827	P23827	D	C
PF00004	PF06144	AAA	DNA_pol3_delta	P06710	P28630	B	A
PF06144	PF06144	DNA_pol3_delta	DNA_pol3_delta	P28630	P28630	A	F
PF00220	PF00220	Hormone_4	Hormone_4	P01175	P01175	B	A
PF00857	PF00857	Isochorismatase	Isochorismatase	P21367	P21367	A	B
PF01318	PF01318	Bromo_coat	Bromo_coat	P03602	P03602	Q	P
PF00023	PF00870	Ank	P53	Q13625	P04637	B	A
PF01928	PF01928	CYTH	CYTH	Q8U2H2	Q8U2H2	B	A
PF01411	PF01411	tRNA-synt_2c	tRNA-synt_2c	O67323	O67323	B	A
PF01026	PF01026	TatD_DNase	TatD_DNase	P37346	P37346	B	A
PF01210	PF01210	NAD_Gly3P_dh_N	NAD_Gly3P_dh_N	Q8I5P5	Q8I5P5	B	A
PF00627	PF00179	UBA	UQ_con	P61086	P61086	B	A
PF02082	PF02082	Rrf2	Rrf2	Q81EX1	Q81EX1	C	B
PF02872	PF02872	5_nucleotid_C	5_nucleotid_C	P07024	P07024	A	B
PF01099	PF01099	Uteroglobin	Uteroglobin	P02779	P02779	B	A
PF02923	PF02923	BamHI	BamHI	P23940	P23940	A	B
PF02110	PF02110	HK	HK	P39593	P39593	A	B
PF02947	PF02947	Flt3_lig	Flt3_lig	P49771	P49771	A	B
PF01114	PF01477	Colipase	PLAT	P02703	P00591	D	C
PF01114	PF00151	Colipase	Lipase	P02703	P00591	D	C
PF02740	PF01477	Colipase_C	PLAT	P00591	P02703	C	D
PF00151	PF00151	Lipase	Lipase	P00591	P00591	C	A
PF04345	PF04345	Chor_lyase	Chor_lyase	P26602	P26602	A	B
PF01452	PF01452	Rota_NSP4	Rota_NSP4	O92323	O92323	A	B
PF00963	PF00963	Cohesin	Cohesin	Q45996	Q45996	A	B
PF00008	PF00059	EGF	Lectin_C	P16109	P16109	C	D
PF00312	PF01250	Ribosomal_S15	Ribosomal_S6	P80378	P23370	B	F
PF08447	PF08447	PAS_3	PAS_3	Q9ZWQ6	Q9ZWQ6	B	C
PF04814	PF04814	HNF-1_N	HNF-1_N	P22361	P22361	D	B
PF02976	PF02976	MutH	MutH	P06722	P06722	B	A
PF02985	PF02985	HEAT	HEAT	P70168	P70168	B	A
PF01196	PF01196	Ribosomal_L17	Ribosomal_L17	Q9Z9H5	Q9Z9H5	D	C
PF00503	PF00400	G-alpha	WD40	P62871	P10824	B	A
PF00406	PF00406	ADK	ADK	P43188	P43188	B	A
PF02318	PF00071	RPH3A_effector	Ras	P47709	P63012	B	A
PF05524	PF00391	PEP-utilisers_N	PEP-utilizers	P08839	P08839	B	A
PF00391	PF00391	PEP-utilizers	PEP-utilizers	P08839	P08839	A	B
PF00554	PF07716	RHD	bZIP_2	Q13469	P01100	N	F
PF00554	PF00170	RHD	bZIP_1	Q13469	P05412	N	J
PF01833	PF07716	TIG	bZIP_2	P01100	Q13469	F	N
PF00170	PF07716	bZIP_1	bZIP_2	P01100	P05412	F	J
PF02982	PF02982	Scytalone_dh	Scytalone_dh	P56221	P56221	A	C
PF00051	PF00089	Kringle	Trypsin	P00735	P00735	B	A
PF00415	PF00415	RCC1	RCC1	P18754	P18754	A	B
PF01337	PF01337	Barstar	Barstar	P11540	P11540	A	B
PF01006	PF01006	HCV_NS4a	HCV_NS4a	P27958	P27958	C	D
PF00103	PF00041	Hormone_1	fn3	P01241	P10912	A	B
PF02136	PF00071	NTF2	Ras	P61972	P62825	B	E
PF01339	PF00072	CheB_methylest	Response_reg	P04042	P04042	B	A
PF01339	PF01339	CheB_methylest	CheB_methylest	P04042	P04042	A	B
PF02728	PF02728	Cu_amine_oxidN3	Cu_amine_oxidN3	P12807	P12807	B	C
PF01470	PF01470	Peptidase_C15	Peptidase_C15	O07883	O07883	B	A
PF00359	PF00359	PTS_EIIA_2	PTS_EIIA_2	P00550	P00550	B	A
PF00224	PF02887	PK	PK_C	P11974	P11974	C	D
PF00763	PF02882	THF_DHG_CYH	THF_DHG_CYH_C	P11586	P11586	A	B
PF02882	PF02882	THF_DHG_CYH_C	THF_DHG_CYH_C	P11586	P11586	A	B
PF00962	PF00962	A_deaminase	A_deaminase	P03958	P03958	B	D
PF00560	PF00074	LRR_1	RnaseA	P03950	P13489	E	D
PF02778	PF02778	tRNA_int_endo_N	tRNA_int_endo_N	Q58819	Q58819	D	A
PF01974	PF02778	tRNA_int_endo	tRNA_int_endo_N	Q58819	Q58819	B	C
PF02189	PF00017	ITAM	SH2	P43405	P07766	C	D
PF07498	PF07498	Rho_N	Rho_N	P03002	P03002	A	B
PF01517	PF01517	HDV_ag	HDV_ag	P25989	P25989	B	D
PF00560	PF00076	LRR_1	RRM_1	P08579	P09661	D	C
PF01402	PF01402	RHH_1	RHH_1	P13920	P13920	A	B
PF01314	PF01314	AFOR_C	AFOR_C	O93738	O93738	C	D
PF02730	PF02730	AFOR_N	AFOR_N	O93738	O93738	D	A
PF01337	PF00545	Barstar	Ribonuclease	P00648	P11540	B	E
PF01383	PF00502	CpcD	Phycobilisome	P00318	P20116	K	O
PF01584	PF02895	CheW	H-kinase_dim	Q56310	Q56310	A	B
PF02895	PF02895	H-kinase_dim	H-kinase_dim	Q56310	Q56310	B	A
PF00867	PF00752	XPG_I	XPG_N	O93634	O93634	B	A
PF00867	PF00867	XPG_I	XPG_I	O93634	O93634	B	A
PF02262	PF02762	Cbl_N	Cbl_N3	P22681	P22681	C	B
PF02262	PF02761	Cbl_N	Cbl_N2	P22681	P22681	B	A
PF01316	PF02863	Arg_repressor	Arg_repressor_C	O31408	O31408	D	C
PF02863	PF02863	Arg_repressor_C	Arg_repressor_C	O31408	O31408	D	F
PF01316	PF01316	Arg_repressor	Arg_repressor	O31408	O31408	B	F
PF00536	PF00536	SAM_1	SAM_1	P29323	P29323	C	E
PF02900	PF02900	LigB	LigB	P22636	P22636	D	B
PF07746	PF02900	LigA	LigB	P22636	P22635	D	C
PF00169	PF00169	PH	PH	Q06187	Q06187	B	A
PF03576	PF03576	Peptidase_S58	Peptidase_S58	Q59632	Q59632	C	A
PF01242	PF01242	PTPS	PTPS	P27213	P27213	B	A
PF00808	PF00808	CBFD_NFYB_HMF	CBFD_NFYB_HMF	P48781	P48781	B	A
PF02219	PF02219	MTHFR	MTHFR	P00394	P00394	A	B
PF00254	PF00069	FKBP_C	Pkinase	P36897	P62942	B	A
PF00254	PF08515	FKBP_C	TGF_beta_GS	P62942	P36897	A	B
PF02222	PF02222	ATP-grasp	ATP-grasp	P09029	P09029	C	A
PF00772	PF00772	DnaB	DnaB	P03005	P03005	B	A
PF02736	PF00036	Myosin_N	efhand	P07291	P24733	Z	A
PF00598	PF00598	Flu_M1	Flu_M1	P03485	P03485	B	A
PF04726	PF02305	Microvir_J	Phage_F	P03652	P03642	3	1
PF08245	PF08245	Mur_ligase_M	Mur_ligase_M	P11880	P11880	A	B
PF00497	PF00497	SBP_bac_3	SBP_bac_3	P10344	P10344	B	A
PF01441	PF01441	Lipoprotein_6	Lipoprotein_6	Q07337	Q07337	A	C
PF00868	PF01841	Transglut_N	Transglut_core	P00488	P00488	A	B
PF07678	PF00084	A2M_comp	Sushi	P01024	P20023	A	B
PF00332	PF00332	Glyco_hydro_17	Glyco_hydro_17	P15737	P15737	B	A
PF00089	PF00280	Trypsin	potato_inhibit	P01051	P00766	I	E
PF03728	PF03728	Viral_DNA_Zn_bi	Viral_DNA_Zn_bi	P03265	P03265	B	A
PF03728	PF02236	Viral_DNA_Zn_bi	Viral_DNA_bi	P03265	P03265	B	A
PF00607	PF00607	Gag_p24	Gag_p24	P12493	P12493	A	B
PF00503	PF00615	G-alpha	RGS	P49799	P10824	H	D
PF00889	PF00889	EF_TS	EF_TS	P43895	P43895	D	C
PF00607	PF00160	Gag_p24	Pro_isomerase	P62937	P12493	B	D
PF00667	PF00175	FAD_binding_1	NAD_binding_1	P00388	P00388	B	A
PF00310	PF00156	GATase_2	Pribosyltran	P00497	P00497	C	D
PF00273	PF00273	Serum_albumin	Serum_albumin	P02768	P02768	B	A
PF00129	PF02959	MHC_I	Tax	P14079	P01892	C	A
PF02035	PF02035	Coagulin	Coagulin	P02681	P02681	B	A
PF00394	PF07731	Cu-oxidase	Cu-oxidase_2	P37064	P37064	B	A
PF02428	PF00089	Prot_inhib_II	Trypsin	P01080	P00777	I	E
PF00129	PF00969	MHC_I	MHC_II_beta	P01892	P04229	I	H
PF02804	PF02804	RNase_U2	RNase_U2	P67876	P67876	B	A
PF01510	PF00940	Amidase_2	RNA_pol	P00806	P00573	L	P
PF00552	PF00665	Integrase	rve	P03354	P03354	C	D
PF00552	PF00552	Integrase	Integrase	P03354	P03354	A	B
PF01421	PF01421	Reprolysin	Reprolysin	P15167	P15167	B	A
PF00022	PF03372	Actin	Exo_endo_phos	P00639	P68135	D	A
PF00143	PF00143	Interferon	Interferon	P01574	P01574	B	A
PF00046	PF00157	Homeobox	Pou	P10037	P10037	A	B
PF02742	PF01325	Fe_dep_repr_C	Fe_dep_repress	P33120	P33120	C	D
PF02196	PF00071	RBD	Ras	P04049	P62834	B	A
PF02787	PF02787	CPSase_L_D3	CPSase_L_D3	P00968	P00968	G	C
PF02157	PF02157	Man-6-P_recep	Man-6-P_recep	P11456	P11456	B	A
PF02230	PF02230	Abhydrolase_2	Abhydrolase_2	Q53547	Q53547	B	A
PF01442	PF01442	Apolipoprotein	Apolipoprotein	P02647	P02647	D	B
PF00128	PF00197	Alpha-amylase	Kunitz_legume	P04063	P07596	A	C
PF07966	PF00026	A1_Propeptide	Asp	P20142	P20142	A	P
PF03973	PF00089	Triabin	Trypsin	Q27049	P00735	I	H
PF02251	PF02252	PA28_alpha	PA28_beta	Q06323	Q06323	E	D
PF02251	PF02251	PA28_alpha	PA28_alpha	Q06323	Q06323	E	G
PF02252	PF02252	PA28_beta	PA28_beta	Q06323	Q06323	D	B
PF02993	PF00770	MCPVI	Peptidase_C5	P03274	P03252	B	A
PF00197	PF00089	Kunitz_legume	Trypsin	P01070	P00761	B	A
PF07921	PF07921	Fibritin_C	Fibritin_C	P10104	P10104	C	B
PF00469	PF00018	F-protein	SH3_1	P06241	P03406	C	B
PF00469	PF00469	F-protein	F-protein	P03406	P03406	B	A
PF00023	PF00178	Ank	Ets	Q00420	Q00422	B	A
PF00235	PF00235	Profilin	Profilin	P07737	P07737	B	A
PF00198	PF00198	2-oxoacid_dh	2-oxoacid_dh	P07016	P07016	C	B
PF00632	PF00179	HECT	UQ_con	P68036	Q05086	D	A
PF00632	PF00632	HECT	HECT	Q05086	Q05086	B	C
PF00457	PF00722	Glyco_hydro_11	Glyco_hydro_16	P23904	P18429	B	B
PF07677	PF07677	A2M_recep	A2M_recep	Q7SIH1	Q7SIH1	B	A
PF02752	PF02752	Arrestin_C	Arrestin_C	P08168	P08168	D	C
PF02752	PF00339	Arrestin_C	Arrestin_N	P08168	P08168	B	C
PF00197	PF00197	Kunitz_legume	Kunitz_legume	P01070	P01070	B	A
PF03418	PF03418	Peptidase_M63	Peptidase_M63	P22321	P22321	A	B
PF02551	PF02551	Acyl_CoA_thio	Acyl_CoA_thio	P23911	P23911	B	A
PF02283	PF02283	CobU	CobU	Q05599	Q05599	B	A
PF00313	PF00313	CSD	CSD	P41016	P41016	B	A
PF00038	PF00038	Filament	Filament	P08670	P08670	B	F
PF05375	PF00089	Pacifastin_I	Trypsin	P80060	P00766	I	E
PF05739	PF05008	SNARE	V-SNARE	Q9Z2Q7	O88384	D	C
PF00957	PF05008	Synaptobrevin	V-SNARE	O88384	Q9WUF4	C	A
PF07474	PF07686	G2F	V-set	Q05793	P10493	B	A
PF01131	PF01131	Topoisom_bac	Topoisom_bac	O29238	O29238	C	B
PF01131	PF01751	Topoisom_bac	Toprim	O29238	O29238	B	C
PF00246	PF00246	Peptidase_M14	Peptidase_M14	P00730	P00730	B	A
PF02914	PF02914	Mu_transposase	Mu_transposase	P07636	P07636	B	A
PF02126	PF02126	PTE	PTE	P45548	P45548	A	B
PF06411	PF06411	HdeA	HdeA	P26604	P26604	B	A
PF04719	PF02269	TAFII28	TFIID-18kDa	Q15544	Q15543	B	A
PF01325	PF01325	Fe_dep_repress	Fe_dep_repress	P33120	P33120	A	B
PF00675	PF02271	Peptidase_M16	UCR_14kD	P00129	P23004	F	N
PF05193	PF05193	Peptidase_M16_C	Peptidase_M16_C	P23004	P23004	B	N
PF00023	PF00069	Ank	Pkinase	P42771	Q00534	B	A
PF02909	PF00440	TetR_C	TetR_N	P09164	P09164	A	B
PF02909	PF02909	TetR_C	TetR_C	P09164	P09164	A	B
PF02310	PF02310	B12-binding	B12-binding	P13009	P13009	A	B
PF02785	PF02786	Biotin_carb_C	CPSase_L_D2	P24182	P24182	A	B
PF02785	PF00289	Biotin_carb_C	CPSase_L_chain	P24182	P24182	A	B
PF02785	PF02785	Biotin_carb_C	Biotin_carb_C	P24182	P24182	B	A
PF06482	PF06482	Endostatin	Endostatin	P39060	P39060	D	C
PF00405	PF00405	Transferrin	Transferrin	P02787	P02787	A	D
PF00129	PF00047	MHC_I	ig	P01901	P01731	D	K
PF00612	PF00063	IQ	Myosin_head	P10587	P10587	G	A
PF00063	PF00063	Myosin_head	Myosin_head	P10587	P10587	F	E
PF02736	PF00063	Myosin_N	Myosin_head	P10587	P10587	F	E
PF02885	PF07831	Glycos_trans_3N	PYNP_C	P77836	P77836	B	A
PF00264	PF00264	Tyrosinase	Tyrosinase	Q9ZP19	Q9ZP19	B	A
PF01807	PF01807	zf-CHC2	zf-CHC2	Q9X4D0	Q9X4D0	B	A
PF01111	PF00069	CKS	Pkinase	P61024	P24941	B	A
PF02821	PF00089	Staphylokinase	Trypsin	P15240	P00747	C	B
PF00014	PF00068	Kunitz_BPTI	Phospholip_A2_1	P00989	P00617	B	A
PF01356	PF00128	A_amylase_inhib	Alpha-amylase	P00690	P01092	P	T
PF01330	PF01330	RuvA_N	RuvA_N	P40832	P40832	D	C
PF07499	PF01330	RuvA_C	RuvA_N	P40832	P40832	D	A
PF00258	PF00067	Flavodoxin_1	p450	P14779	P14779	A	F
PF01583	PF01583	APS_kinase	APS_kinase	Q12657	Q12657	B	A
PF02940	PF02940	mRNA_triPase	mRNA_triPase	O13297	O13297	B	A
PF06134	PF06134	RhaA	RhaA	P32170	P32170	C	D
PF04568	PF04568	IATP	IATP	P01096	P01096	B	C
PF05194	PF02814	UreE_C	UreE_N	P18317	P18317	C	A
PF02814	PF02814	UreE_N	UreE_N	P18317	P18317	A	B
PF05194	PF05194	UreE_C	UreE_C	P18317	P18317	D	C
PF05350	PF00069	GSK-3_bind	Pkinase	Q92837	P49841	X	A
PF02301	PF05557	HORMA	MAD	Q13257	Q9Y6D9	C	F
PF02301	PF02301	HORMA	HORMA	Q13257	Q13257	C	B
PF05557	PF05557	MAD	MAD	Q9Y6D9	Q9Y6D9	F	E
PF00255	PF00255	GSHPx	GSHPx	P00435	P00435	B	A
PF02085	PF02085	Cytochrom_CIII	Cytochrom_CIII	P00131	P00131	B	A
PF02255	PF02255	PTS_IIA	PTS_IIA	P23532	P23532	B	A
PF02310	PF06368	B12-binding	Met_asp_mut_E	P80077	P80078	B	A
PF06368	PF06368	Met_asp_mut_E	Met_asp_mut_E	P80077	P80077	B	D
PF01288	PF01288	HPPK	HPPK	P43777	P43777	A	B
PF00071	PF02115	Ras	Rho_GDI	P52565	P61586	E	A
PF02304	PF02305	Phage_B	Phage_F	P03641	P03633	F	B
PF02319	PF02319	E2F_TDP	E2F_TDP	Q14188	Q16254	B	A
PF01333	PF01333	Apocytochr_F_C	Apocytochr_F_C	P23577	P23577	B	A
PF01750	PF01750	HycI	HycI	P37182	P37182	B	A
PF01374	PF01374	Glyco_hydro_46	Glyco_hydro_46	P33665	P33665	A	B
PF01321	PF00557	Creatinase_N	Peptidase_M24	P38488	P38488	B	A
PF01321	PF01321	Creatinase_N	Creatinase_N	P38488	P38488	A	B
PF00280	PF00280	potato_inhibit	potato_inhibit	P01053	P01053	B	A
PF03919	PF03919	mRNA_cap_C	mRNA_cap_C	Q84424	Q84424	A	B
PF00586	PF02769	AIRS	AIRS_C	P08178	P08178	B	A
PF00586	PF00586	AIRS	AIRS	P08178	P08178	B	A
PF02769	PF02769	AIRS_C	AIRS_C	P08178	P08178	B	D
PF01221	PF01221	Dynein_light	Dynein_light	P63167	P63167	B	A
PF00718	PF00761	Polyoma_coat	Polyoma_coat2	P49302	P12908	A	F
PF00758	PF00041	EPO_TPO	fn3	P01588	P19235	C	A
PF00182	PF00182	Glyco_hydro_19	Glyco_hydro_19	P23951	P23951	B	A
PF01110	PF01110	CNTF	CNTF	P26441	P26441	4	1
PF01024	PF01024	Colicin	Colicin	Q47108	Q47108	B	A
PF02250	PF02250	Orthopox_35kD	Orthopox_35kD	O73568	O73568	B	A
PF01250	PF01250	Ribosomal_S6	Ribosomal_S6	P23370	P23370	B	A
PF00561	PF00702	Abhydrolase_1	Hydrolase	P34914	P34914	A	B
PF01393	PF01393	Chromo_shadow	Chromo_shadow	P40381	P40381	B	A
PF00696	PF00696	AA_kinase	AA_kinase	P95474	P95474	B	A
PF02022	PF00129	Integrase_Zn	MHC_I	P18464	P24740	A	C
PF01817	PF01817	CM_2	CM_2	P32178	P32178	B	A
PF00733	PF00310	Asn_synthase	GATase_2	P22106	P22106	C	B
PF00733	PF00733	Asn_synthase	Asn_synthase	P22106	P22106	C	B
PF00797	PF00797	Acetyltransf_2	Acetyltransf_2	Q00267	Q00267	D	A
PF07478	PF01820	Dala_Dala_lig_C	Dala_Dala_lig_N	P25051	P25051	B	A
PF01820	PF01820	Dala_Dala_lig_N	Dala_Dala_lig_N	P25051	P25051	B	A
PF07478	PF07478	Dala_Dala_lig_C	Dala_Dala_lig_C	P25051	P25051	A	B
PF00853	PF00853	Runt	Runt	Q01196	Q01196	Q	R
PF02225	PF04253	PA	TFR_dimer	P02786	P02786	D	C
PF04253	PF04253	TFR_dimer	TFR_dimer	P02786	P02786	F	G
PF03435	PF03435	Saccharop_dh	Saccharop_dh	Q9P4R4	Q9P4R4	B	A
PF05373	PF05373	Pro_3_hydrox_C	Pro_3_hydrox_C	O09345	O09345	A	B
PF05118	PF05373	Asp_Arg_Hydrox	Pro_3_hydrox_C	O09345	O09345	A	B
PF00619	PF00619	CARD	CARD	O14727	P55211	C	P
PF02185	PF00071	HR1	Ras	Q16512	P61586	B	A
PF02249	PF02241	MCR_alpha	MCR_beta	Q49601	Q49605	B	A
PF02745	PF02241	MCR_alpha_N	MCR_beta	Q49601	Q49605	B	D
PF02241	PF02783	MCR_beta	MCR_beta_N	Q49601	Q49601	B	E
PF02241	PF02240	MCR_beta	MCR_gamma	Q49601	Q49604	B	C
PF02745	PF02240	MCR_alpha_N	MCR_gamma	Q49605	Q49604	A	F
PF02745	PF02783	MCR_alpha_N	MCR_beta_N	Q49605	Q49601	A	B
PF02249	PF02745	MCR_alpha	MCR_alpha_N	Q49605	Q49605	A	D
PF02745	PF02745	MCR_alpha_N	MCR_alpha_N	Q49605	Q49605	A	D
PF02783	PF02240	MCR_beta_N	MCR_gamma	Q49604	Q49601	F	B
PF02249	PF02240	MCR_alpha	MCR_gamma	Q49604	Q49605	F	D
PF02249	PF02783	MCR_alpha	MCR_beta_N	Q49601	Q49605	B	A
PF02783	PF02783	MCR_beta_N	MCR_beta_N	Q49601	Q49601	B	E
PF02249	PF02249	MCR_alpha	MCR_alpha	Q49605	Q49605	A	D
PF02945	PF02945	Endonuclease_7	Endonuclease_7	P13340	P13340	B	A
PF01248	PF01248	Ribosomal_L7Ae	Ribosomal_L7Ae	P55769	P55769	B	A
PF05199	PF00732	GMC_oxred_C	GMC_oxred_N	P81156	P81156	A	B
PF00732	PF00732	GMC_oxred_N	GMC_oxred_N	P81156	P81156	A	B
PF00084	PF00089	Sushi	Trypsin	P00736	P00736	A	B
PF03256	PF03256	APC10	APC10	P53068	P53068	B	A
PF01225	PF08245	Mur_ligase	Mur_ligase_M	P45066	P45066	A	B
PF01225	PF01225	Mur_ligase	Mur_ligase	P45066	P45066	A	B
PF00754	PF00754	F5_F8_type_C	F5_F8_type_C	P12259	P12259	A	B
PF05297	PF00917	Herpes_LMP1	MATH	P03230	Q12933	E	C
PF01225	PF02875	Mur_ligase	Mur_ligase_C	P22188	P22188	B	A
PF02875	PF08245	Mur_ligase_C	Mur_ligase_M	P22188	P22188	A	B
PF00071	PF00515	Ras	TPR_1	P63000	P19878	A	B
PF00432	PF07711	Prenyltrans	RabGGT_insert	Q08603	Q08602	B	A
PF00542	PF00542	Ribosomal_L12	Ribosomal_L12	P29396	P29396	B	A
PF00129	PF04253	MHC_I	TFR_dimer	P02786	Q30201	C	A
PF02216	PF02216	B	B	P02976	P02976	G	H
PF00228	PF00949	Bowman-Birk_leg	Peptidase_S7	P14340	P01062	B	C
PF06268	PF06268	Fascin	Fascin	Q16658	Q16658	A	B
PF00323	PF00323	Defensin_1	Defensin_1	P59665	P59665	B	A
PF00128	PF00139	Alpha-amylase	Lectin_legB	P02873	P00690	B	A
PF00709	PF00709	Adenylsucc_synt	Adenylsucc_synt	Q96529	Q96529	B	A
PF06029	PF06029	AlkA_N	AlkA_N	P04395	P04395	B	A
PF00730	PF00730	HhH-GPD	HhH-GPD	P04395	P04395	A	B
PF02941	PF02943	FeThRed_A	FeThRed_B	Q55389	Q55781	A	B
PF00168	PF00387	C2	PI-PLC-Y	P10688	P10688	B	A
PF00168	PF00388	C2	PI-PLC-X	P10688	P10688	A	B
PF06438	PF06438	HasA	HasA	Q54450	Q54450	A	B
PF01025	PF01025	GrpE	GrpE	P09372	P09372	B	A
PF01479	PF01479	S4	S4	P45802	P45802	B	A
PF02282	PF02282	Herpes_UL42	Herpes_UL42	P10226	P10226	C	E
PF05739	PF00995	SNARE	Sec1	P32851	P61765	B	A
PF00995	PF00804	Sec1	Syntaxin	P32851	P61765	B	A
PF00875	PF03441	DNA_photolyase	FAD_binding_7	P00914	P00914	B	A
PF00368	PF00368	HMG-CoA_red	HMG-CoA_red	P04035	P04035	D	A
PF07979	PF03549	Intimin_C	Tir_receptor_M	P19809	Q9KWH9	I	T
PF04101	PF04101	Glyco_tran_28_C	Glyco_tran_28_C	P17443	P17443	A	B
PF02763	PF02763	Diphtheria_C	Diphtheria_C	P00588	P00588	B	A
PF00026	PF06394	Asp	Pepsin-I3	P19400	P00791	B	A
PF06554	PF06554	Olfactory_mark	Olfactory_mark	Q64288	Q64288	B	A
PF06999	PF06999	Suc_Fer-like	Suc_Fer-like	O66511	O66511	B	A
PF00013	PF00013	KH_1	KH_1	Q9UNW9	Q9UNW9	C	D
PF00062	PF00993	Lys	MHC_II_alpha	P04228	P00698	A	P
PF00062	PF00969	Lys	MHC_II_beta	Q31135	P00698	B	P
PF00786	PF00786	PBD	PBD	Q13153	Q13153	B	A
PF00786	PF00069	PBD	Pkinase	Q13153	Q13153	B	D
PF02270	PF02270	TFIIF_beta	TFIIF_beta	P13984	P13984	C	A
PF05793	PF02270	TFIIF_alpha	TFIIF_beta	P13984	P35269	C	D
PF05793	PF05793	TFIIF_alpha	TFIIF_alpha	P35269	P35269	F	B
PF03039	PF00041	IL12	fn3	P29459	P29460	B	A
PF00178	PF00178	Ets	Ets	P19419	P19419	C	F
PF02840	PF02840	Prp18	Prp18	P33411	P33411	B	A
PF00406	PF05191	ADK	ADK_lid	P07170	P07170	A	B
PF02560	PF02560	Cyanate_lyase	Cyanate_lyase	P00816	P00816	D	A
PF07645	PF00089	EGF_CA	Trypsin	P07204	P00734	I	M
PF02334	PF02334	RTP	RTP	P68732	P68732	B	A
PF00736	PF03144	EF1_GNE	GTP_EFTU_D2	P02994	P32471	A	B
PF00736	PF00009	EF1_GNE	GTP_EFTU	P02994	P32471	A	B
PF00736	PF03143	EF1_GNE	GTP_EFTU_D3	P02994	P32471	A	B
PF00687	PF00687	Ribosomal_L1	Ribosomal_L1	O52704	O52704	B	A
PF00070	PF02852	Pyr_redox	Pyr_redox_dim	P31023	P31023	B	D
PF01648	PF00550	ACPS	PP-binding	P96618	P80643	B	D
PF01648	PF01648	ACPS	ACPS	P96618	P96618	B	A
PF01742	PF00957	Peptidase_M27	Synaptobrevin	P63027	P10844	B	A
PF00596	PF00596	Aldolase_II	Aldolase_II	P32169	P32169	A	D
PF01180	PF00070	DHO_dh	Pyr_redox	Q28943	Q28943	B	D
PF01180	PF07992	DHO_dh	Pyr_redox_2	Q28943	Q28943	A	D
PF02018	PF02018	CBM_4_9	CBM_4_9	P51584	P51584	A	B
PF01341	PF01341	Glyco_hydro_6	Glyco_hydro_6	Q7SIG5	Q7SIG5	A	B
PF05222	PF05222	AlaDh_PNT_N	AlaDh_PNT_N	Q60164	Q60164	B	A
PF04814	PF01329	HNF-1_N	Pterin_4a	P61459	P22361	C	G
PF00310	PF04898	GATase_2	Glu_syn_central	Q05755	Q05755	B	A
PF00310	PF01645	GATase_2	Glu_synthase	Q05755	Q05755	A	B
PF00598	PF08289	Flu_M1	Flu_M1_C	P03485	P03485	B	A
PF01826	PF00089	TIL	Trypsin	P07851	P00772	D	B
PF02817	PF02852	E3_binding	Pyr_redox_dim	P11959	P11961	B	C
PF02211	PF02211	NHase_beta	NHase_beta	P13449	P13449	D	B
PF00150	PF00150	Cellulase	Cellulase	P54583	P54583	B	A
PF00119	PF00129	ATP-synt_A	MHC_I	P05504	P16391	C	A
PF00028	PF00028	Cadherin	Cadherin	P09803	P09803	B	A
PF00514	PF01056	Arm	Myc_N	P01106	Q02821	D	A
PF00514	PF03066	Arm	Nucleoplasmin	P05221	Q02821	B	A
PF01149	PF01149	Fapy_DNA_glyco	Fapy_DNA_glyco	O50606	O50606	B	A
PF00769	PF00769	ERM	ERM	P26038	P26038	C	A
PF00373	PF00769	Band_41	ERM	P26038	P26038	C	A
PF01012	PF00766	ETF	ETF_alpha	P38975	P38974	B	A
PF00514	PF00129	Arm	MHC_I	P52292	P04222	C	A
PF00514	PF00047	Arm	ig	P52292	P43627	C	D
PF05454	PF00397	DAG1	WW	P11532	Q14118	A	P
PF01663	PF01663	Phosphodiest	Phosphodiest	Q51782	Q51782	D	A
PF01652	PF01652	IF4E	IF4E	P63073	P63073	B	A
PF02822	PF00089	Antistasin	Trypsin	P00761	P82107	A	B
PF04969	PF04969	CS	CS	Q15185	Q15185	A	B
PF03603	PF04364	DNA_III_psi	DNA_pol3_chi	P28632	P28905	D	C
PF00615	PF05924	RGS	SAMP	P25054	O15169	B	A
PF02991	PF02991	MAP1_LC3	MAP1_LC3	P60519	P60519	B	A
PF07679	PF00047	I-set	ig	P13596	P13596	D	C
PF01583	PF01747	APS_kinase	ATP-sulfurylase	Q12650	Q12650	C	B
PF00415	PF00071	RCC1	Ras	P62826	P18754	A	B
PF06456	PF06456	Arfaptin	Arfaptin	P53365	P53365	B	A
PF02744	PF01087	GalP_UDP_tr_C	GalP_UDP_transf	P09148	P09148	C	D
PF01087	PF01087	GalP_UDP_transf	GalP_UDP_transf	P09148	P09148	C	D
PF02744	PF02744	GalP_UDP_tr_C	GalP_UDP_tr_C	P09148	P09148	A	B
PF01858	PF01857	RB_A	RB_B	P06400	P06400	B	A
PF01602	PF01217	Adaptin_N	Clat_adaptor_s	P17427	P62743	A	S
PF01602	PF01602	Adaptin_N	Adaptin_N	P17427	P63010	A	B
PF00928	PF01602	Adap_comp_sub	Adaptin_N	P17427	P84092	A	M
PF00928	PF01217	Adap_comp_sub	Clat_adaptor_s	P62743	P84092	S	M
PF04997	PF01192	RNA_pol_Rpb1_1	RNA_pol_Rpb6	P04050	P20435	A	F
PF06456	PF00071	Arfaptin	Ras	P53365	P63000	B	D
PF00237	PF00237	Ribosomal_L22	Ribosomal_L22	P48286	P48286	B	A
PF01814	PF01814	Hemerythrin	Hemerythrin	P02244	P02244	H	A
PF06369	PF06369	Anemone_cytotox	Anemone_cytotox	P07845	P07845	B	A
PF00591	PF00591	Glycos_transf_3	Glycos_transf_3	P50384	P50384	C	B
PF00498	PF00498	FHA	FHA	O96017	O96017	D	J
PF00045	PF00965	Hemopexin	TIMP	P08253	P16035	A	C
PF00413	PF00040	Peptidase_M10	fn2	P08253	P08253	B	A
PF02463	PF06470	SMC_N	SMC_hinge	Q9X0R4	Q9X0R4	A	B
PF06470	PF06470	SMC_hinge	SMC_hinge	Q9X0R4	Q9X0R4	A	B
PF01536	PF01536	SAM_decarbox	SAM_decarbox	P17707	P17707	B	A
PF01278	PF01278	Omptin	Omptin	P09169	P09169	B	A
PF00486	PF00486	Trans_reg_C	Trans_reg_C	P08402	P08402	B	F
PF00450	PF00450	Peptidase_S10	Peptidase_S10	Q8W4X3	Q8W4X3	B	A
PF01129	PF01129	ART	ART	P20974	P20974	B	A
PF02789	PF02789	Peptidase_M17_N	Peptidase_M17_N	P68767	P68767	B	F
PF00883	PF02789	Peptidase_M17	Peptidase_M17_N	P68767	P68767	B	A
PF00883	PF00883	Peptidase_M17	Peptidase_M17	P68767	P68767	F	D
PF00588	PF08032	SpoU_methylase	SpoU_sub_bind	P63177	P63177	C	H
PF00425	PF00425	Chorismate_bind	Chorismate_bind	P00897	P00897	A	C
PF00514	PF01049	Arm	Cadherin_C	Q02248	P09803	A	B
PF01049	PF02985	Cadherin_C	HEAT	Q02248	P09803	C	D
PF00707	PF00411	IF3_C	Ribosomal_S11	Q9ACJ8	P80376	V	K
PF01555	PF01555	N6_N4_Mtase	N6_N4_Mtase	P23192	P23192	B	A
PF01912	PF01912	eIF-6	eIF-6	Q60357	Q60357	B	A
PF00533	PF00870	BRCT	P53	Q12888	P04637	B	A
PF00517	PF00170	GP41	bZIP_1	P04578	P03069	B	B
PF00001	PF00001	7tm_1	7tm_1	P02699	P02699	A	B
PF00071	PF07487	Ras	SopE_GEF	O52623	P60953	B	A
PF00009	PF03143	GTP_EFTU	GTP_EFTU_D3	P60338	P60338	B	A
PF00887	PF00887	ACBP	ACBP	P07107	P07107	A	C
PF00178	PF00319	Ets	SRF-TF	P11831	P28324	A	G
PF01532	PF01532	Glyco_hydro_47	Glyco_hydro_47	Q9P8T8	Q9P8T8	D	C
PF00884	PF00884	Sulfatase	Sulfatase	P51691	P51691	B	A
PF00969	PF00047	MHC_II_beta	ig	P28067	P28068	A	B
PF00071	PF03545	Ras	YopE	P63000	Q51451	D	B
PF00794	PF00071	PI3K_rbd	Ras	P48736	P01112	A	B
PF00454	PF00071	PI3_PI4_kinase	Ras	P48736	P01112	A	B
PF00271	PF00271	Helicase_C	Helicase_C	P26664	P26664	B	A
PF02246	PF07654	B1	C1-set	Q51918	P01834	E	A
PF00157	PF00157	Pou	Pou	P14859	P14859	A	B
PF03775	PF05209	MinC_C	MinC_N	Q9X0D7	Q9X0D7	C	B
PF03775	PF03775	MinC_C	MinC_C	Q9X0D7	Q9X0D7	C	D
PF05209	PF05209	MinC_N	MinC_N	Q9X0D7	Q9X0D7	D	C
PF02256	PF00037	Fe_hyd_SSU	Fer4	P07598	P07603	L	S
PF02256	PF02256	Fe_hyd_SSU	Fe_hyd_SSU	P07603	P07603	T	S
PF02256	PF02906	Fe_hyd_SSU	Fe_hyd_lg_C	P07603	P07598	T	M
PF02906	PF02906	Fe_hyd_lg_C	Fe_hyd_lg_C	P07598	P07598	L	M
PF00389	PF00389	2-Hacid_dh	2-Hacid_dh	P30901	P30901	B	A
PF00906	PF00129	Hepatitis_core	MHC_I	P12901	P01892	C	A
PF00598	PF00129	Flu_M1	MHC_I	P03485	P01892	C	A
PF04951	PF04951	Peptidase_M55	Peptidase_M55	P26902	P26902	E	A
PF00540	PF00540	Gag_p17	Gag_p17	P12493	P12493	B	A
PF01661	PF01661	A1pp	A1pp	O28751	O28751	B	A
PF01051	PF01051	Rep_3	Rep_3	Q52546	Q52546	B	A
PF08332	PF08332	CaMKII_AD	CaMKII_AD	P11798	P11798	E	D
PF01234	PF01234	NNMT_PNMT_TEMT	NNMT_PNMT_TEMT	P11086	P11086	B	A
PF00151	PF01477	Lipase	PLAT	P29183	P29183	A	B
PF00993	PF01669	MHC_II_alpha	Myelin_MBP	P01903	P02686	A	C
PF00969	PF01669	MHC_II_beta	Myelin_MBP	Q29703	P02686	B	C
PF00675	PF00675	Peptidase_M16	Peptidase_M16	P10507	P11914	D	C
PF00762	PF00762	Ferrochelatase	Ferrochelatase	P22830	P22830	B	A
PF01300	PF01300	Sua5_yciO_yrdC	Sua5_yciO_yrdC	P45748	P45748	B	A
PF00992	PF00992	Troponin	Troponin	P45379	P19429	B	C
PF00992	PF00036	Troponin	efhand	P19429	P63316	F	D
PF01997	PF01997	Translin	Translin	Q15631	Q15631	A	B
PF00538	PF00538	Linker_histone	Linker_histone	P02259	P02259	A	B
PF02025	PF02025	IL5	IL5	P05113	P05113	B	A
PF03971	PF03971	IDH	IDH	P16100	P16100	B	A
PF00594	PF00059	Gla	Lectin_C	P23806	P00741	A	C
PF01401	PF01401	Peptidase_M2	Peptidase_M2	Q10714	Q10714	A	B
PF01293	PF01293	PEPCK_ATP	PEPCK_ATP	Q7SIC6	Q7SIC6	B	A
PF00186	PF00303	DHFR_1	Thymidylat_synt	P13922	P13922	D	B
PF03737	PF03737	Methyltransf_6	Methyltransf_6	P83846	P83846	C	A
PF03625	PF03625	DUF302	DUF302	Q84BQ8	Q84BQ8	B	A
PF01869	PF01869	BcrAD_BadFG	BcrAD_BadFG	P11568	P11568	A	B
PF02179	PF00012	BAG	HSP70	Q99933	P19120	B	A
PF07651	PF07651	ANTH	ANTH	Q9VI75	Q9VI75	B	A
PF03259	PF03259	Robl_LC7	Robl_LC7	Q9X9L0	Q9X9L0	B	A
PF04421	PF04421	Mss4	Mss4	Q08326	Q08326	B	A
PF03545	PF03545	YopE	YopE	P31493	P31493	A	B
PF02246	PF02246	B1	B1	Q51912	Q51912	B	A
PF02614	PF02614	UxaC	UxaC	Q9WXR9	Q9WXR9	A	B
PF02091	PF02091	tRNA-synt_2e	tRNA-synt_2e	Q9WY59	Q9WY59	A	B
PF02965	PF02965	Met_synt_B12	Met_synt_B12	Q9WYA6	Q9WYA6	B	A
PF03424	PF03424	CBM_17_28	CBM_17_28	P94622	P94622	B	A
PF02545	PF02545	Maf	Maf	Q02169	Q02169	A	B
PF00625	PF00625	Guanylate_kin	Guanylate_kin	P15454	P15454	B	A
PF00248	PF02214	Aldo_ket_red	K_tetra	P62483	P10499	A	E
PF02888	PF00036	CaMBD	efhand	P70604	P62161	B	R
PF02441	PF02052	Flavoprotein	Gallidermin	P30197	P08136	D	M
PF02441	PF02441	Flavoprotein	Flavoprotein	P30197	P30197	D	L
PF02572	PF02572	CobA_CobO_BtuR	CobA_CobO_BtuR	P31570	P31570	B	A
PF01896	PF01896	DNA_primase_S	DNA_primase_S	Q9P9H1	Q9P9H1	B	A
PF07565	PF07565	Band_3_cyto	Band_3_cyto	P02730	P02730	Q	P
PF01975	PF01975	SurE	SurE	P96112	P96112	B	A
PF00225	PF00091	Kinesin	Tubulin	P02550	P33173	A	K
PF00225	PF03953	Kinesin	Tubulin_C	P33173	P02550	K	A
PF02816	PF02816	Alpha_kinase	Alpha_kinase	Q923J1	Q923J1	A	B
PF00069	PF08515	Pkinase	TGF_beta_GS	P36897	P36897	B	A
PF00244	PF00583	14-3-3	Acetyltransf_1	P63104	Q29495	D	E
PF04814	PF00046	HNF-1_N	Homeobox	P20823	P20823	B	A
PF02254	PF02254	TrkA_N	TrkA_N	P31069	P31069	B	A
PF00112	PF00086	Peptidase_C1	Thyroglobulin_1	P04233	P07711	I	B
PF00724	PF00724	Oxidored_FMN	Oxidored_FMN	Q9XG54	Q9XG54	B	A
PF00042	PF00969	Globin	MHC_II_beta	Q31164	P02089	D	D
PF04265	PF04263	TPK_B1_binding	TPK_catalytic	P35202	P35202	B	A
PF04265	PF04265	TPK_B1_binding	TPK_B1_binding	P35202	P35202	A	B
PF04263	PF04263	TPK_catalytic	TPK_catalytic	Q9R0M5	Q9R0M5	B	A
PF00407	PF00407	Bet_v_I	Bet_v_I	P52779	P52779	A	B
PF07654	PF01378	C1-set	IgG_binding_B	P01837	P06654	L	A
PF06613	PF06613	KorB_C	KorB_C	P07674	P07674	B	C
PF08435	PF08435	Calici_coat_C	Calici_coat_C	Q83884	Q83884	C	A
PF00915	PF08435	Calici_coat	Calici_coat_C	Q83884	Q83884	B	A
PF00915	PF00915	Calici_coat	Calici_coat	Q83884	Q83884	B	A
PF04430	PF04430	DUF498	DUF498	O27021	O27021	B	A
PF02374	PF02374	ArsA_ATPase	ArsA_ATPase	P08690	P08690	B	A
PF00022	PF00022	Actin	Actin	P68135	P68135	B	A
PF00711	PF00711	Defensin_beta	Defensin_beta	P60022	P60022	D	B
PF01392	PF01392	Fz	Fz	P97401	P97401	C	A
PF00340	PF00340	IL1	IL1	P18510	P18510	1	2
PF04461	PF04461	DUF520	DUF520	P44096	P44096	B	A
PF00281	PF00673	Ribosomal_L5	Ribosomal_L5_C	P08895	P08895	B	A
PF00281	PF00281	Ribosomal_L5	Ribosomal_L5	P08895	P08895	B	A
PF00673	PF00673	Ribosomal_L5_C	Ribosomal_L5_C	P08895	P08895	A	B
PF05357	PF05357	Phage_Coat_A	Phage_Coat_A	P03661	P03661	B	A
PF03171	PF03171	2OG-FeII_Oxy	2OG-FeII_Oxy	P05326	P05326	B	A
PF03150	PF03150	CCP_MauG	CCP_MauG	P55929	P55929	A	C
PF00004	PF08542	AAA	Rep_fac_C	Q8U4J3	Q8U4J3	A	F
PF08542	PF08542	Rep_fac_C	Rep_fac_C	Q8U4J3	Q8U4J3	F	C
PF00340	PF00047	IL1	ig	P18510	P14778	X	Y
PF07764	PF07764	Omega_Repress	Omega_Repress	Q57468	Q57468	A	B
PF01921	PF01921	tRNA-synt_1f	tRNA-synt_1f	O57963	O57963	B	A
PF03065	PF03065	Glyco_hydro_57	Glyco_hydro_57	O32462	O32462	B	A
PF02833	PF02833	DHHA2	DHHA2	P37487	P37487	C	A
PF03793	PF03717	PASTA	PBP_dimer	O34006	O34006	A	B
PF03572	PF03572	Peptidase_S41	Peptidase_S41	P96086	P96086	A	B
PF01244	PF01244	Peptidase_M19	Peptidase_M19	P16444	P16444	A	B
PF00045	PF00045	Hemopexin	Hemopexin	P14780	P14780	A	B
PF00335	PF00335	Tetraspannin	Tetraspannin	P60033	P60033	A	B
PF03145	PF03145	Sina	Sina	P61092	P61092	A	B
PF08544	PF00288	GHMP_kinases_C	GHMP_kinases_N	Q8DR49	Q8DR49	D	F
PF00757	PF01030	Furin-like	Recep_L_domain	P00533	P00533	A	B
PF00757	PF00757	Furin-like	Furin-like	P00533	P00533	A	B
PF04998	PF04563	RNA_pol_Rpb1_5	RNA_pol_Rpb2_1	Q8RQE9	Q8RQE8	M	N
PF04983	PF01192	RNA_pol_Rpb1_3	RNA_pol_Rpb6	Q8RQE8	Q8RQE7	D	E
PF04234	PF04234	CopC	CopC	Q47454	Q47454	B	A
PF02598	PF02598	DUF171	DUF171	O26109	O26109	A	B
PF07824	PF07824	Chaperone_III	Chaperone_III	O30917	O30917	A	B
PF03550	PF03550	LolB	LolB	P61320	P61320	B	A
PF00122	PF00122	E1-E2_ATPase	E1-E2_ATPase	P04191	P04191	A	B
PF00690	PF00122	Cation_ATPase_N	E1-E2_ATPase	P04191	P04191	A	B
PF02063	PF00036	MARCKS	efhand	P62158	P26645	A	B
PF00126	PF03466	HTH_1	LysR_substrate	Q9WXC7	Q9WXC7	A	B
PF00126	PF00126	HTH_1	HTH_1	Q9WXC7	Q9WXC7	A	B
PF00004	PF07499	AAA	RuvA_C	Q56214	Q9F1Q3	C	B
PF00560	PF00071	LRR_1	Ras	P41391	P62826	L	J
PF00516	PF00073	GP120	Rhv	P03303	P05877	C	B
PF01591	PF01591	6PF2K	6PF2K	P16118	P16118	A	B
PF00815	PF00815	Histidinol_dh	Histidinol_dh	P06988	P06988	B	A
PF00178	PF00292	Ets	PAX	Q02548	P27577	E	F
PF01287	PF01287	eIF-5a	eIF-5a	O50089	O50089	B	C
PF02022	PF00665	Integrase_Zn	rve	Q72498	Q72498	C	B
PF02022	PF02022	Integrase_Zn	Integrase_Zn	Q72498	Q72498	D	C
PF01267	PF01115	F-actin_cap_A	F_actin_cap_B	P14315	P13127	B	A
PF01115	PF01115	F_actin_cap_B	F_actin_cap_B	P14315	P14315	B	D
PF01267	PF01267	F-actin_cap_A	F-actin_cap_A	P13127	P13127	A	C
PF04083	PF00561	Abhydro_lipase	Abhydrolase_1	P80035	P80035	B	A
PF04083	PF04083	Abhydro_lipase	Abhydro_lipase	P80035	P80035	A	B
PF02074	PF02074	Peptidase_M32	Peptidase_M32	Q8U3L0	Q8U3L0	A	C
PF03807	PF03807	F420_oxidored	F420_oxidored	O29370	O29370	A	B
PF03515	PF03513	Cloacin	Cloacin_immun	P00646	P02984	A	B
PF00514	PF08347	Arm	CTNNB1_binding	P35222	Q9NQB0	A	B
PF02735	PF03730	Ku	Ku_C	P13010	P12956	B	A
PF02735	PF02735	Ku	Ku	P13010	P12956	B	A
PF02735	PF03731	Ku	Ku_N	P13010	P12956	B	A
PF03731	PF02037	Ku_N	SAP	P12956	P13010	A	B
PF00808	PF00352	CBFD_NFYB_HMF	TBP	P20226	Q01658	C	B
PF01177	PF01177	Asp_Glu_race	Asp_Glu_race	O58403	O58403	B	A
PF02981	PF02981	FokI_N	FokI_N	P14870	P14870	A	B
PF07859	PF07859	Abhydrolase_3	Abhydrolase_3	O28558	O28558	B	A
PF00403	PF00080	HMA	Sod_Cu	P40202	P00445	B	C
PF05067	PF05067	Mn_catalase	Mn_catalase	P60355	P60355	E	F
PF00993	PF00405	MHC_II_alpha	Transferrin	P01910	P02789	A	C
PF00969	PF00405	MHC_II_beta	Transferrin	P02789	P06343	C	B
PF07468	PF07468	Agglutinin	Agglutinin	Q38719	Q38719	B	A
PF01537	PF00020	Herpes_glycop_D	TNFR_c6	Q92956	P57083	B	A
PF00975	PF00975	Thioesterase	Thioesterase	Q08787	Q08787	C	O
PF01840	PF01840	TCL1_MTCP1	TCL1_MTCP1	P56280	P56280	B	A
PF01985	PF01985	CRS1_YhbY	CRS1_YhbY	P71376	P71376	B	A
PF01363	PF01363	FYVE	FYVE	Q15075	Q15075	B	A
PF04074	PF04074	DUF386	DUF386	P44583	P44583	B	A
PF00374	PF00374	NiFeSe_Hases	NiFeSe_Hases	P12944	P12944	L	D
PF05972	PF00514	APC_15aa	Arm	Q02248	P25054	A	C
PF06083	PF06083	IL17	IL17	Q96PD4	Q96PD4	X	A
PF00311	PF00311	PEPcase	PEPcase	P04711	P04711	B	A
PF02602	PF02602	HEM4	HEM4	P10746	P10746	B	A
PF02518	PF04542	HATPase_c	Sigma70_r2	O32728	O32727	C	A
PF02518	PF04539	HATPase_c	Sigma70_r3	O32727	O32728	B	C
PF05264	PF05264	CfAFP	CfAFP	Q9GTP0	Q9GTP0	B	A
PF00890	PF00111	FAD_binding_2	Fer2	P00363	P00364	M	N
PF00111	PF02910	Fer2	Succ_DH_flav_C	P00363	P00364	A	B
PF07654	PF01123	C1-set	Stap_Strp_toxin	P62560	P01851	B	C
PF07654	PF02876	C1-set	Stap_Strp_tox_C	P01851	P62560	C	B
PF01641	PF01641	SelR	SelR	P14930	P14930	B	A
PF02353	PF02353	CMAS	CMAS	Q7D9R5	Q7D9R5	B	A
PF00494	PF00494	SQS_PSY	SQS_PSY	P37268	P37268	A	B
PF02420	PF02420	AFP	AFP	O16119	O16119	A	B
PF00033	PF05193	Cytochrom_B_N	Peptidase_M16_C	P07256	P00163	A	C
PF01568	PF00355	Molydop_binding	Rieske	Q7SIF4	Q7SIF3	A	B
PF00384	PF00355	Molybdopterin	Rieske	Q7SIF3	Q7SIF4	B	A
PF06433	PF06433	Me-amine-dh_H	Me-amine-dh_H	P29894	P29894	H	J
PF01656	PF01656	CbiA	CbiA	Q72H90	Q72H90	B	A
PF02234	PF00069	CDI	Pkinase	P24941	P46527	A	C
PF01704	PF01704	UDPGP	UDPGP	Q16222	Q16222	A	B
PF02011	PF02011	Glyco_hydro_48	Glyco_hydro_48	P38686	P38686	B	C
PF01537	PF01537	Herpes_glycop_D	Herpes_glycop_D	P57083	P57083	B	A
PF08536	PF08536	Plant_TF	Plant_TF	Q9LL85	Q9LL85	A	B
PF05237	PF02597	MoeZ_MoeB	ThiS	P30748	P12282	D	B
PF00899	PF02597	ThiF	ThiS	P30748	P12282	D	B
PF02635	PF02635	DrsE	DrsE	P39164	P39164	C	E
PF05835	PF00957	Synaphin	Synaptobrevin	Q95PA1	P47194	E	A
PF05739	PF05835	SNARE	Synaphin	Q95PA1	O46345	E	B
PF02753	PF02753	Pili_assembly_C	Pili_assembly_C	P62609	P62609	A	B
PF01214	PF00069	CK_II_beta	Pkinase	P67870	P68400	C	A
PF00310	PF01380	GATase_2	SIS	P17169	P17169	C	B
PF08543	PF08543	Phos_pyr_kin	Phos_pyr_kin	P55882	P55882	B	A
PF00625	PF00018	Guanylate_kin	SH3_1	P31016	P31016	A	B
PF00330	PF00330	Aconitase	Aconitase	P36683	P36683	A	B
PF04711	PF04711	ApoA-II	ApoA-II	P02652	P02652	B	D
PF02929	PF00703	Bgal_small_N	Glyco_hydro_2	P00722	P00722	C	B
PF01032	PF01032	FecCD	FecCD	P06609	P06609	B	A
PF00005	PF01032	ABC_tran	FecCD	P06609	P06611	B	D
PF04423	PF04423	Rad50_zn_hook	Rad50_zn_hook	P58301	P58301	A	B
PF03853	PF03853	YjeF_N	YjeF_N	P40165	P40165	B	A
PF03288	PF03288	Pox_D5	Pox_D5	P10277	P10277	A	B
PF02437	PF02437	Ski_Sno	Ski_Sno	Q9UI36	Q9UI36	B	A
PF00921	PF00921	Lipoprotein_2	Lipoprotein_2	O68364	O68364	D	B
PF00034	PF00124	Cytochrom_C	Photo_RC	P02953	P00095	M	C
PF07722	PF07722	Peptidase_C26	Peptidase_C26	Q92820	Q92820	B	A
PF07476	PF05034	MAAL_C	MAAL_N	Q05514	Q05514	A	B
PF07476	PF07476	MAAL_C	MAAL_C	Q05514	Q05514	A	B
PF05034	PF05034	MAAL_N	MAAL_N	Q05514	Q05514	A	B
PF02878	PF02880	PGM_PMM_I	PGM_PMM_III	P47244	P47244	B	A
PF02878	PF02878	PGM_PMM_I	PGM_PMM_I	P47244	P47244	A	B
PF02878	PF00408	PGM_PMM_I	PGM_PMM_IV	P47244	P47244	A	B
PF06831	PF06831	H2TH	H2TH	P42371	P42371	A	B
PF01404	PF01404	Ephrin_lbd	Ephrin_lbd	P54763	P54763	C	D
PF02861	PF02861	Clp_N	Clp_N	P63284	P63284	D	A
PF06330	PF06330	TRI5	TRI5	P13513	P13513	B	A
PF00009	PF00129	GTP_EFTU	MHC_I	P01901	O08582	I	Q
PF00540	PF00077	Gag_p17	RVP	P03369	P20873	C	S
PF01109	PF01109	GM_CSF	GM_CSF	P04141	P04141	B	A
PF03590	PF03590	AsnA	AsnA	P00963	P00963	B	A
PF00503	PF02188	G-alpha	GoLoco	O08773	P63096	B	A
PF01664	PF01664	Reo_sigma1	Reo_sigma1	P03528	P03528	B	C
PF07475	PF07475	Hpr_kinase_C	Hpr_kinase_C	Q9RE09	Q9RE09	C	A
PF07475	PF00381	Hpr_kinase_C	PTS-HPr	Q9RE09	P08877	C	J
PF07832	PF07832	Bse634I	Bse634I	Q8RT53	Q8RT53	B	A
PF07475	PF02603	Hpr_kinase_C	Hpr_kinase_N	P75548	P75548	D	C
PF02603	PF02603	Hpr_kinase_N	Hpr_kinase_N	P75548	P75548	B	A
PF07827	PF01909	KNTase_C	NTP_transf_2	P05057	P05057	B	A
PF07827	PF07827	KNTase_C	KNTase_C	P05057	P05057	A	B
PF01665	PF01665	Rota_NSP3	Rota_NSP3	P03536	P03536	C	D
PF04096	PF04096	Nucleoporin2	Nucleoporin2	P52948	P52948	C	D
PF02511	PF02511	Thy1	Thy1	Q9WYT0	Q9WYT0	D	B
PF04928	PF04928	PAP_central	PAP_central	P29468	P29468	B	A
PF01909	PF04928	NTP_transf_2	PAP_central	P29468	P29468	B	A
PF02761	PF00179	Cbl_N2	UQ_con	P68036	P22681	C	A
PF00179	PF00097	UQ_con	zf-C3HC4	P68036	P22681	C	A
PF02216	PF07654	B	C1-set	P01857	P38507	D	C
PF00034	PF07992	Cytochrom_C	Pyr_redox_2	Q06530	Q06529	A	C
PF03067	PF03067	Chitin_bind_3	Chitin_bind_3	O83009	O83009	A	B
PF02896	PF02896	PEP-utilizers_C	PEP-utilizers_C	Q8R7R4	Q8R7R4	B	A
PF02458	PF02458	Transferase	Transferase	Q70PR7	Q70PR7	A	B
PF00930	PF00539	DPPIV_N	Tat	P27487	P12506	A	W
PF00326	PF00539	Peptidase_S9	Tat	P27487	P12506	C	Y
PF07834	PF00179	RanGAP1_C	UQ_con	P46061	P63279	B	A
PF07834	PF07834	RanGAP1_C	RanGAP1_C	P46061	P46061	B	D
PF05009	PF00129	EBV-NA3	MHC_I	P12977	P30460	E	A
PF06026	PF06026	Rib_5-P_isom_A	Rib_5-P_isom_A	P44725	P44725	B	A
PF03917	PF03199	GSH_synth_ATP	GSH_synthase	Q08220	Q08220	B	A
PF03917	PF03917	GSH_synth_ATP	GSH_synth_ATP	Q08220	Q08220	B	A
PF02327	PF02327	BChl_A	BChl_A	Q46393	Q46393	B	A
PF00025	PF05351	Arf	GMP_PDE_delta	O43924	Q9D0J4	B	A
PF07654	PF00034	C1-set	Cytochrom_C	Q31164	P00021	B	B
PF00034	PF00993	Cytochrom_C	MHC_II_alpha	P01904	P00021	C	D
PF00034	PF00969	Cytochrom_C	MHC_II_beta	P00021	Q31164	B	B
PF00140	PF04539	Sigma70_r1_2	Sigma70_r3	Q9EZJ8	Q9EZJ8	A	B
PF05076	PF05076	SUFU	SUFU	Q9UMX1	Q9UMX1	A	B
PF00025	PF04811	Arf	Sec23_trunk	P20606	P15303	B	A
PF00025	PF04815	Arf	Sec23_helical	P20606	P15303	B	A
PF00025	PF00626	Arf	Gelsolin	P20606	P15303	B	A
PF04811	PF04811	Sec23_trunk	Sec23_trunk	P15303	P15303	A	C
PF05195	PF05195	AMP_N	AMP_N	P15034	P15034	D	A
PF05195	PF00557	AMP_N	Peptidase_M24	P15034	P15034	D	A
PF03764	PF00009	EFG_IV	GTP_EFTU	P13551	P13551	A	B
PF01259	PF01259	SAICAR_synt	SAICAR_synt	Q9X0X0	Q9X0X0	B	A
PF00927	PF01841	Transglut_C	Transglut_core	P21980	P21980	D	A
PF01841	PF01841	Transglut_core	Transglut_core	P21980	P21980	A	D
PF08125	PF08125	Mannitol_dh_C	Mannitol_dh_C	O08355	O08355	A	B
PF01413	PF01413	C4	C4	Q7SIB2	Q7SIB3	B	F
PF02548	PF02548	Pantoate_transf	Pantoate_transf	P31057	P31057	D	I
PF04451	PF04451	Capsid_Iridovir	Capsid_Iridovir	P30328	P30328	A	D
PF00116	PF07835	COX2	COX4_pro_2	Q8KRK5	Q03736	J	B
PF02305	PF02305	Phage_F	Phage_F	P03641	P11333		
PF03392	PF03392	OS-D	OS-D	Q9NG96	Q9NG96	B	A
PF05806	PF00019	Noggin	TGF_beta	P18075	Q13253	L	A
PF01426	PF01426	BAH	BAH	P54784	P54784	B	A
PF02985	PF01279	HEAT	Parathyroid	Q14974	P12272	S	Q
PF03810	PF01279	IBN_N	Parathyroid	Q14974	P12272	S	Q
PF00514	PF01279	Arm	Parathyroid	Q14974	P12272	S	Q
PF00149	PF00160	Metallophos	Pro_isomerase	P62937	Q08209	C	A
PF00160	PF00036	Pro_isomerase	efhand	P62937	P63098	G	F
PF00117	PF00117	GATase	GATase	Q9X0C8	Q9X0C8	B	A
PF00022	PF00273	Actin	Serum_albumin	P02774	P68135	D	A
PF00648	PF00648	Peptidase_C2	Peptidase_C2	P97571	P97571	B	A
PF00034	PF02167	Cytochrom_C	Cytochrom_C1	P00044	P07143	W	O
PF02167	PF02167	Cytochrom_C1	Cytochrom_C1	P07143	P07143	D	O
PF00169	PF00071	PH	Ras	Q64096	P60953	A	B
PF05224	PF05224	NDT80_PhoG	NDT80_PhoG	P38830	P38830	B	A
PF08100	PF00891	Dimerisation	Methyltransf_2	P28002	P28002	A	F
PF00365	PF00365	PFK	PFK	P70826	P70826	B	A
PF04092	PF04092	SAG	SAG	P13664	P13664	A	B
PF00022	PF00063	Actin	Myosin_head	P68135	P13538	V	A
PF00806	PF00806	PUF	PUF	Q14671	Q14671	B	A
PF00760	PF00760	Cucumo_coat	Cucumo_coat	P23627	P23627	C	B
PF00888	PF00888	Cullin	Cullin	Q13616	Q13616	B	A
PF00723	PF00723	Glyco_hydro_15	Glyco_hydro_15	O85672	O85672	B	A
PF00788	PF00071	RA	Ras	P01112	Q03386	B	A
PF00788	PF00788	RA	RA	Q03386	Q03386	A	C
PF00139	PF00405	Lectin_legB	Transferrin	P04122	P02788	A	C
PF01406	PF01406	tRNA-synt_1e	tRNA-synt_1e	P21888	P21888	B	A
PF00964	PF00964	Elicitin	Elicitin	P15569	P15569	B	A
PF00129	PF01030	MHC_I	Recep_L_domain	P01901	P15208	A	P
PF00455	PF06026	DeoR	Rib_5-P_isom_A	O50083	O50083	C	A
PF04864	PF04863	Alliinase_C	EGF_alliinase	Q01594	Q01594	B	A
PF04863	PF04863	EGF_alliinase	EGF_alliinase	Q01594	Q01594	B	A
PF04864	PF04864	Alliinase_C	Alliinase_C	Q01594	Q01594	A	B
PF01501	PF01501	Glyco_transf_8	Glyco_transf_8	P13280	P13280	H	G
PF00170	PF00096	bZIP_1	zf-C2H2	P08046	P03069	C	C
PF00681	PF00681	Plectin	Plectin	P15924	P15924	B	A
PF03931	PF01847	Skp1_POZ	VHL	Q15369	P40337	C	V
PF01541	PF01541	GIY-YIG	GIY-YIG	P13299	P13299	B	A
PF00403	PF00403	HMA	HMA	O00244	O00244	A	B
PF07140	PF07140	IFNGR1	IFNGR1	P15260	P15260	C	E
PF01591	PF00300	6PF2K	PGAM	P25114	P25114	B	A
PF02080	PF02080	TrkA_C	TrkA_C	O27564	O27564	D	H
PF01047	PF01047	MarR	MarR	P52003	P52003	C	A
PF01018	PF01018	GTP1_OBG	GTP1_OBG	P20964	P20964	A	B
PF00947	PF00947	Pico_P2A	Pico_P2A	P04936	P04936	A	B
PF02041	PF02041	Auxin_BP	Auxin_BP	P13689	P13689	B	C
PF03925	PF03925	SeqA	SeqA	P36658	P36658	D	A
PF01687	PF01687	Flavokinase	Flavokinase	O74866	O74866	A	B
PF02381	PF02381	MraZ	MraZ	P75467	P75467	D	C
PF01357	PF01357	Pollen_allerg_1	Pollen_allerg_1	P43213	P43213	A	B
PF00419	PF00419	Fimbrial	Fimbrial	P08407	P08407	C	A
PF01862	PF01862	PvlArgDC	PvlArgDC	Q57764	Q57764	B	G
PF01011	PF01011	PQQ	PQQ	P38539	P38539	C	A
PF00162	PF00162	PGK	PGK	P27362	P27362	A	C
PF00299	PF00299	Squash	Squash	P01074	P01074	B	A
PF00679	PF00009	EFG_C	GTP_EFTU	P32324	P32324	D	C
PF00634	PF08423	BRCA2	Rad51	P51587	Q06609	B	A
PF06192	PF06192	TorD	TorD	O87949	O87949	B	A
PF00411	PF01084	Ribosomal_S11	Ribosomal_S18	P80382	P80376	R	K
PF00996	PF01239	GDI	PPTA	Q08602	P37727	A	R
PF00476	PF00476	DNA_pol_A	DNA_pol_A	P52026	P52026	A	B
PF01497	PF01497	Peripla_BP_2	Peripla_BP_2	P37028	P37028	B	A
PF03450	PF01799	CO_deh_flav_C	Fer2_2	P19920	P19921	C	A
PF04695	PF00018	Pex14_N	SH3_1	P53112	P80667	P	A
PF05184	PF03489	SapB_1	SapB_2	P07602	P07602	B	C
PF03489	PF03489	SapB_2	SapB_2	P07602	P07602	B	A
PF05184	PF05184	SapB_1	SapB_1	P07602	P07602	C	B
PF03513	PF03513	Cloacin_immun	Cloacin_immun	P02984	P02984	B	A
PF05579	PF05579	Peptidase_S32	Peptidase_S32	P19811	P19811	B	A
PF00205	PF00205	TPP_enzyme_M	TPP_enzyme_M	P20906	P20906	B	K
PF00554	PF00085	RHD	Thioredoxin	P19838	P10599	B	A
PF00984	PF00984	UDPG_MGDP_dh	UDPG_MGDP_dh	P11759	P11759	D	C
PF00984	PF03721	UDPG_MGDP_dh	UDPG_MGDP_dh_N	P11759	P11759	D	C
PF03720	PF03721	UDPG_MGDP_dh_C	UDPG_MGDP_dh_N	P11759	P11759	B	A
PF00127	PF03337	Copper-bind	Pox_F12L	P29889	P22364	P	O
PF02138	PF02138	Beach	Beach	Q8NFP9	Q8NFP9	B	A
PF08279	PF01614	HTH_11	IclR	Q9WXS0	Q9WXS0	B	A
PF08279	PF08279	HTH_11	HTH_11	Q9WXS0	Q9WXS0	B	A
PF00115	PF06481	COX1	COX_ARM	P18400	P18401	G	F
PF03450	PF00111	CO_deh_flav_C	Fer2	P19914	P19915	F	D
PF01584	PF02518	CheW	HATPase_c	P07363	P07363	C	A
PF01140	PF01140	Gag_MA	Gag_MA	P03332	P03332	D	C
PF00046	PF00319	Homeobox	SRF-TF	Q6B2C0	P11746	D	A
PF00605	PF00605	IRF	IRF	P23906	P23906	I	G
PF03921	PF00092	ICAM_N	VWA	P05362	P20701	C	D
PF03921	PF03921	ICAM_N	ICAM_N	P05362	P05362	C	A
PF03720	PF03720	UDPG_MGDP_dh_C	UDPG_MGDP_dh_C	P11759	P11759	B	D
PF04014	PF04014	SpoVT_AbrB	SpoVT_AbrB	P18534	P18534	E	D
PF01378	PF01378	IgG_binding_B	IgG_binding_B	P06654	P06654	B	D
PF00416	PF00416	Ribosomal_S13	Ribosomal_S13	O05207	O05207	E	C
PF02518	PF00416	HATPase_c	Ribosomal_S13	O05207	O05207	E	F
PF01041	PF01041	DegT_DnrJ_EryC1	DegT_DnrJ_EryC1	Q9S5Y7	Q9S5Y7	B	A
PF06406	PF06406	StbA	StbA	P11904	P11904	B	A
PF03795	PF03795	YCII	YCII	P44887	P44887	B	A
PF05223	PF03717	MecA_N	PBP_dimer	Q93IC2	Q93IC2	A	B
PF04961	PF04961	FTCD_C	FTCD_C	Q9X1P6	Q9X1P6	B	A
PF05899	PF05899	Cupin_3	Cupin_3	Q9X0J6	Q9X0J6	B	A
PF00924	PF05552	MS_channel	TM_helix	P11666	P11666	D	C
PF00924	PF00924	MS_channel	MS_channel	P11666	P11666	D	E
PF02657	PF02657	SufE	SufE	P76194	P76194	B	A
PF00028	PF00560	Cadherin	LRR_1	P25146	P12830	A	B
PF08191	PF08191	LRR_adjacent	LRR_adjacent	P25146	P25146	A	B
PF00728	PF00728	Glyco_hydro_20	Glyco_hydro_20	P07686	P07686	D	B
PF02838	PF02838	Glyco_hydro_20b	Glyco_hydro_20b	P07686	P07686	B	C
PF07748	PF07748	Glyco_hydro_38C	Glyco_hydro_38C	Q29451	Q29451	C	D
PF01074	PF07748	Glyco_hydro_38	Glyco_hydro_38C	Q29451	Q29451	D	A
PF01074	PF01074	Glyco_hydro_38	Glyco_hydro_38	Q29451	Q29451	A	B
PF01012	PF07992	ETF	Pyr_redox_2	P16099	P53570	B	E
PF00443	PF00443	UCH	UCH	Q93009	Q93009	B	A
PF01858	PF01858	RB_A	RB_A	P06400	P06400	E	A
PF00856	PF00856	SET	SET	Q8WTS6	Q8WTS6	B	A
PF01052	PF01052	SpoA	SpoA	O85094	O85094	D	B
PF00942	PF00942	CBM_3	CBM_3	Q06851	Q06851	A	B
PF00443	PF00240	UCH	ubiquitin	Q93009	P62988	A	C
PF07100	PF07100	DUF1362	DUF1362	Q9X0F9	Q9X0F9	B	A
PF01636	PF01636	APH	APH	P00552	P00552	B	A
PF00755	PF00755	Carn_acyltransf	Carn_acyltransf	P47934	P47934	B	A
PF01182	PF01182	Glucosamine_iso	Glucosamine_iso	P46926	P46926	A	B
PF00595	PF00071	PDZ	Ras	P60953	Q9JK83	B	D
PF00023	PF00554	Ank	RHD	P25963	Q04206	E	A
PF07170	PF07170	Sortase_B	Sortase_B	Q8NX63	Q8NX63	B	A
PF07741	PF00352	BRF1	TBP	P13393	P29056	I	J