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Finding cDNAs
UGID:721717     UniGene Hs.506558     Homo sapiens (human)   HCFC2 Order cDNA clone, Links
CDNA FLJ58092 complete cds, highly similar to Host cell factor 2 (HCFC2)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_037452.1 host cell factor C2 H. sapiens 100.0 791
XP_001097074.1 PREDICTED: host cell factor C2 isoform 3 M. mulatta 99.9 791
XP_509326.2 PREDICTED: host cell factor C2 isoform 3 P. troglodytes 99.8 791
NP_001074687.1 host cell factor 2 M. musculus 95.0 716
NP_001017706.1 hypothetical protein LOC550401 D. rerio 81.1 212
NP_001087989.1 hypothetical protein LOC494675 X. laevis 67.0 2061
NP_524621.2 Host cell factor CG1710-PA, isoform A D. melanogaster 53.6 1398
NP_501279.1 human HCF1 related family member (hcf-1) C. elegans 50.3 746

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; uncharacterized tissue; lymph node; lung; muscle; adipose tissue; mixed; parathyroid; embryonic tissue; esophagus; bone marrow; stomach; prostate; intestine; liver; kidney; blood; mammary gland; nerve; placenta; trachea; thymus; uterus; vascular; connective tissue; skin; ear; eye; bone; thyroid; cervix
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q23.3
UniSTS entry: Chr 12 RH103342
UniSTS entry: Chr 12 SHGC-64926
UniSTS entry: Chr 12 STS-H93140
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_013320.2 Homo sapiens host cell factor C2 (HCFC2), mRNA PA
AF117210.1 Homo sapiens host cell factor 2 (HCF-2) mRNA, complete cds P
AK223342.1 Homo sapiens mRNA for host cell factor C2 variant, clone: TST01027 PA
AK313466.1 Homo sapiens cDNA, FLJ94012, Homo sapiens host cell factor 2 (HCF-2), mRNA P
BC033799.1 Homo sapiens host cell factor C2, mRNA (cDNA clone MGC:45151 IMAGE:5172046), complete cds PA
AK296523.1 Homo sapiens cDNA FLJ58092 complete cds, highly similar to Host cell factor 2 P

EST sequences (165)

AI077497.1 Clone IMAGE:1678659 mixed 3' read PA
AI160796.1 Clone IMAGE:1715463 placenta 3' read PA
BX116970.1 Clone IMAGp998E16729_;_IMAGE:322167 parathyroid P
BX091992.1 Clone IMAGp998F154914_;_IMAGE:1998734 stomach A
CB129324.1 Clone C1SNU17-4-D07 cervix 5' read P
CB136198.1 Clone L14ChoiCK0-14-D06 liver 5' read P
AI247087.1 Clone IMAGE:1998734 stomach 3' read A
AA724269.1 Clone IMAGE:1326429 mixed 3' read PA
AI351064.1 Clone IMAGE:1948331 uncharacterized tissue 3' read A
AI580890.1 Clone IMAGE:2048960 embryonic tissue 3' read
AI670821.1 Clone IMAGE:2297121 kidney 3' read P
CB266778.1 adipose tissue 5' read
AI990171.1 Clone IMAGE:2499448 uncharacterized tissue 3' read PA
BX484383.1 Clone DKFZp686K15242 muscle 5' read P
BX485869.1 Clone DKFZp686P07248 muscle 5' read
BX500696.1 Clone DKFZp779H0158 liver 5' read P
BX505814.1 Clone DKFZp686E18212 muscle 5' read P
AW117287.1 Clone IMAGE:2604547 mixed 3' read PA
BX645743.1 Clone DKFZp781P0945 uncharacterized tissue 5' read P
AL138197.1 Clone DKFZp547N232 brain 5' read P
AW369323.1 mammary gland P
AW628925.1 Clone IMAGE:2975220 mixed 3' read PA
BX953908.1 Clone DKFZp781D0851 uncharacterized tissue 5' read P
BX954070.1 Clone DKFZp781C2252 uncharacterized tissue 5' read P
BX955869.1 Clone DKFZp781F0674 uncharacterized tissue 5' read P
AW889099.1 brain
AW956392.1 uncharacterized tissue
AW958637.1 uncharacterized tissue P
BE176789.1 thyroid P
BE176843.1 thyroid P
BE208589.1 Clone IMAGE:2823984 lung 5' read P
BE245089.1 Clone TCBAP2519 lymph node
BE245143.1 Clone TCBAP2519 lymph node P
CV027542.1 mixed 5' read P
CV030646.1 mixed 5' read P
BP228694.1 Clone FBR00619 brain 5' read P
BP355190.1 Clone T7R05994 esophagus 5' read P
BP369059.1 Clone TST01027 testis 5' read P
BP370269.1 Clone TST05202 testis 5' read P
BE299050.1 Clone IMAGE:3028616 muscle 5' read P
BP281966.1 Clone KMR02930 bone marrow 5' read P
BP283106.1 Clone KMR05832 bone marrow 5' read P
H47785.1 Clone IMAGE:193739 mixed 5' read P
AV692981.1 Clone GKCBMA09 liver 5' read P
DN992854.1 Clone TC108617 brain 5' read P
AA833778.1 Clone IMAGE:1372452 lymph node
DA006756.1 Clone 3NB692008486 uncharacterized tissue 5' read P
DA020231.1 Clone ASTRO2001545 brain 5' read
BF679705.1 Clone IMAGE:4295606 prostate 5' read P
DA238243.1 Clone BRAWH3035340 brain 5' read P
DA245020.1 Clone BRAWH3043618 brain 5' read P
DA317784.1 Clone BRHIP3009196 brain 5' read P
DA331579.1 Clone BRHIP3029410 brain 5' read P
DA248595.1 Clone BRAWH3048083 brain 5' read P
DA109341.1 Clone BRACE3025883 brain 5' read P
DA613356.1 Clone IMR322011985 brain 5' read P
DA497154.1 Clone FCBBF3010172 brain 5' read P
DA431217.1 Clone COLON2007670 intestine 5' read P
DA547099.1 Clone HCASM2005138 vascular 5' read P
DA484225.1 Clone FCBBF2000793 brain 5' read P
BF063207.1 Clone IMAGE:3322786 intestine 3' read P
BF063352.1 Clone IMAGE:3323065 intestine 3' read P
DB034775.1 Clone TESTI2019953 testis 5' read P
DB028740.1 Clone TESTI2011715 testis 5' read P
DB041490.1 Clone TESTI2028574 testis 5' read P
DB041815.1 Clone TESTI2028989 testis 5' read P
DA810577.1 Clone OCBBF3027211 brain 5' read P
DA810596.1 Clone OCBBF3027235 brain 5' read P
DB029739.1 Clone TESTI2013052 testis 5' read P
DB043115.1 Clone TESTI2030691 testis 5' read P
DA806859.1 Clone OCBBF3022345 brain 5' read P
BF435538.1 Clone IMAGE:3395071 nerve 3' read A
DA814968.1 Clone PEBLM2002319 blood 5' read
DA790063.1 Clone OCBBF2028595 brain 5' read P
DA784372.1 Clone OCBBF2020726 brain 5' read P
DB049792.1 Clone TESTI2039192 testis 5' read P
DB030069.1 Clone TESTI2013492 testis 5' read P
DB025160.1 Clone TESTI2006897 testis 5' read P
BF790975.1 Clone IMAGE:4338557 muscle 5' read
DB050121.1 Clone TESTI2039589 testis 5' read P
DB210606.1 Clone TRACH2023856 trachea 5' read P
DB198736.1 Clone TRACH2006820 trachea 5' read P
DB126442.1 Clone THYMU2036177 thymus 5' read P
DB055652.1 Clone TESTI2047018 testis 5' read P
DB055768.1 Clone TESTI2047173 testis 5' read P
DB286023.1 Clone UTERU3014464 uterus 5' read P
DB070448.1 Clone TESTI4012989 testis 5' read P
DB058875.1 Clone TESTI2051699 testis 5' read P
DB327655.1 Clone PEBLM2002319 blood 3' read
DB295525.1 Clone ASTRO2001545 brain 3' read A
DB289057.1 Clone UTERU3018552 uterus 5' read P
DB442387.1 Clone H013004B04 testis 5' read P
DB519794.1 Clone H013065D21 testis 3' read PA
DB446123.1 Clone H013023L12 testis 5' read P
DB507222.1 Clone H013004B04 testis 3' read PA
DB523625.1 Clone H013080L10 testis 3' read PA
DB452435.1 Clone H013057I01 testis 5' read P
DB525453.1 Clone H013088E07 testis 3' read PA
DB454355.1 Clone H013065D21 testis 5' read
DB511198.1 Clone H013023L12 testis 3' read PA
DB459227.1 Clone H013085C19 testis 5' read
DB459239.1 Clone H013085D08 testis 5' read P
BG413395.1 Clone IMAGE:3576321 kidney 3' read A
BG186009.1 connective tissue
BG204043.1 connective tissue
BG678866.1 Clone IMAGE:4749641 skin 5' read P
BG771804.1 Clone IMAGE:4837507 testis 5' read P
BG717179.1 Clone IMAGE:4821522 testis 5' read P
BG719246.1 Clone IMAGE:4822635 testis 5' read P
BG721581.1 Clone IMAGE:4827455 testis 5' read P
BG722331.1 Clone IMAGE:4825805 testis 5' read P
BG723799.1 Clone IMAGE:4829630 testis 5' read
BG723824.1 Clone IMAGE:4829830 testis 5' read P
AU185964.1 Clone B02482-028 uncharacterized tissue P
AL601403.1 Clone DKFZp313E0342 uncharacterized tissue 5' read P
AL601404.1 Clone DKFZp313E0442 uncharacterized tissue 5' read P
BI459639.1 Clone IMAGE:5266791 testis 5' read P
BI463220.1 Clone IMAGE:5268819 testis 5' read P
DC344090.1 Clone BRTHA3023895 brain 5' read P
BI493218.1 Clone IMAGE:2540727 ear 5' read
BI560127.1 Clone IMAGE:5296087 testis 5' read P
BI561593.1 Clone IMAGE:5298360 testis 5' read P
BI561829.1 Clone IMAGE:5297896 testis 5' read P
BI753559.1 Clone IMAGE:5199197 brain 5' read P
BI827134.1 Clone IMAGE:5169033 brain 5' read P
BI829558.1 Clone IMAGE:5172046 brain 5' read P
BI830661.1 Clone IMAGE:5167225 brain 5' read P
BM560106.1 Clone IMAGE:5744604 brain 5' read P
W37874.1 Clone IMAGE:322167 parathyroid 3' read A
W37916.1 Clone IMAGE:322167 parathyroid 5' read P
BM672018.1 Clone UI-E-EO0-ahz-a-19-0-UI eye 3' read A
BM720094.1 Clone UI-E-EO0-ahz-a-19-0-UI eye 5' read
BM800477.1 Clone IMAGE:5534996 uterus 5' read
BM922277.1 Clone IMAGE:5754438 mixed 5' read P
BQ229332.1 Clone IMAGE:6016726 uncharacterized tissue 5' read
BQ308876.1 mammary gland P
AA035332.1 Clone IMAGE:471452 uterus 3' read A
BU533994.1 Clone IMAGE:6560650 mixed 5' read P
BU622481.1 Clone UI-H-FL1-bgb-i-06-0-UI bone 3' read A
BU656456.1 Clone cl11d11 blood 5' read P
BU689523.1 Clone UI-CF-EC1-aec-c-01-0-UI lung 3' read PA
AA278680.1 Clone IMAGE:703514 lymph node 3' read P
AA278688.1 Clone IMAGE:703514 lymph node 5' read P
CA430675.1 Clone UI-H-FL1-bgb-j-07-0-UI bone 3' read PA
CA432700.1 Clone UI-H-FL1-bgs-j-04-0-UI bone 3' read PA
CA450011.1 Clone UI-CF-FN0-afa-m-17-0-UI lung 3' read PA
AA298808.1 testis 3' read A
AA303058.1 testis 5' read P
AA310618.1 blood 5' read
AA340205.1 brain 5' read
AA377297.1 intestine 3' read A
AA377298.1 intestine 5' read
AA382777.1 testis 5' read P
AA421286.1 Clone IMAGE:731070 testis 3' read PA
AA421368.1 Clone IMAGE:731070 testis 5' read P
AA424155.1 Clone IMAGE:760052 embryonic tissue 3' read A
AA292636.1 Clone IMAGE:701718 lymph node 5' read P
AA292637.1 Clone IMAGE:701718 lymph node 3' read PA
AA600253.1 Clone IMAGE:1027299 bone marrow 3' read PA
AA608906.1 Clone IMAGE:1048653 testis 3' read PA
AA625767.1 Clone IMAGE:745401 testis 3' read A
AA789205.1 Clone 1391505 testis 3' read PA
AA768446.1 Clone IMAGE:1317209 lymph node 3' read PA
AA806783.1 Clone IMAGE:1338755 lymph node 3' read A
AA827227.1 Clone IMAGE:1335191 lymph node 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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