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Hare, Jonathan A. and Robert K. Cowen. 1994. Ontogeny and otolith microstructure of bluefish, Pomatomus saltatrix (Pisces: Pomatomidae). Marine Biology 118: 541-550.
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Hare, Jonathan A., Robert K. Cowen, J. P. Zehr, Francis Juanes and K. H. Day. 1994. Biological and oceanographic insights from larval Labrid (Pisces: Labridae) identification using mtDNA sequences. Marine Biology 118: 17-24.
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Hare, Jonathan A. and Robert K. Cowen. 1996. Transport mechanisms of larval and pelagic juvenile bluefish Pomatomus saltatrix from South Atlantic Bight spawning grounds to Middle Atlantic Bight nursery habitats. Limnology and Oceanography 41: 1264-1280.
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Juanes, Francis, Jonathan A. Hare and Anthony G. Miskiewicz. 1996. Comparing Early Life History Strategies of Pomatomus saltatrix: a Global Approach. Marine and Freshwater Research 47: 365-379.
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Marks, Rick E., Francis Juanes, Jonathan A. Hare and David O. Conover. 1996. Occurrence and effect of the parasitic isopod, Lironeca ovalis (Isopoda: Cymothoidae), on young-of-the-year bluefish, Pomatomus saltatrix (Pisces: Pomatomidae). Canadian Journal of Fisheries and Aquatic Sciences 53: 2052-2057.
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Hare, Jonathan A., Robert K. Cowen, J. P. Zehr, Francis Juanes and K. H. Day. 1998. A correction to: Biological and Oceanographic Insights from Larval Labrid (Pisces: Labridae) Identification using mtDNA Sequences. Marine Biology 130: 589-592.
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Hettler Jr., William F. and Jonathan A. Hare. 1998. Abundance and size of Larval Fishes Outside the Entrance to Beaufort Inlet, North Carolina. Estuaries 21: 476-499.
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Begg, Gavin A., Jonathan A. Hare and Daniel D. Sheehan. 1999. The role of life history parameters as indicators of stock structure. Fisheries Research 43: 141-163.
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