10 proteins |
K | KOG1142 | Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) |
---|
683 letters ath 883 = At1g17440 (683) = ath 245 = At3g10070 (539) = hsa 218 = Hs5032153 (161) = spo 209 = SPAC15A10.02 (450) = sce 163 = YDR145w (539) = dme 150 = 7299489 (196) =
dme 94 _ 7293734 (2328) KOG3598 cel 86 = CE22575 (280) = sce 76 _ YMR043w (286) KOG0015 ath 76 At1g30330 (933) ath 72 At1g19220 (1086) hsa 71 _ Hs4505197 (5262) KOG4443 hsa 71 Hs22061021 (858) dme 71 7303237 (1594) ecu 70 = ECU10g0930 (548) = cel 70 _ CE03633 (2251) KOG1721 dme 70 _ 7294427 (1798) KOG2043 ath 69 At1g25540 (534)
BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At1g17440 (683 letters) Database: kyvama 112,920 sequences; 47,500,486 total letters Score E Sequences producing significant alignments: (bits) Value At1g17440 344 3e-94 At3g10070 99 3e-20 Hs5032153 89 4e-17 SPAC15A10.02 85 5e-16 YDR145w 67 1e-10 7299489 62 3e-09 7293734 41 0.010 CE22575 38 0.085 YMR043w 34 1.2 At1g30330 34 1.2 At1g19220 32 3.6 Hs4505197 32 4.7 Hs22061021 32 4.7 7303237 32 4.7 ECU10g0930 32 6.1 CE03633 32 6.1 7294427 32 6.1 At1g25540 31 8.0 # >At1g17440 # Length = 683 # # Score = 344 bits (883), Expect = 3e-94 # Identities = 200/346 (57%), Positives = 200/346 (57%) # # Query: 41 LMTAPISNSVNSAASPAMTVTTTEGIVXXXXXXXXXXXXXXXXXXXXXGAQIXXXXXXXX 100 # LMTAPISNSVNSAASPAMTVTTTEGIV GAQI # Sbjct: 41 LMTAPISNSVNSAASPAMTVTTTEGIVIQNNSQPNISSPNPTSSNPPIGAQIPSPSPLSH 100 # # Query: 101 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPM 160 # PM # Sbjct: 101 PSSSLDQQTQTQQLVQQTQQLPQQQQQIMQQISSSPIPQLSPQQQQILQQQHMTSQQIPM 160 # # Query: 161 SSYQIAXXXXXXXXXXXXXXXXXXXXXXXXXXYGNVLRQQAGLYGTMNFXXXXXXXXXXX 220 # SSYQIA YGNVLRQQAGLYGTMNF # Sbjct: 161 SSYQIAQSLQRSPSLSRLSQIQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQ 220 # # Query: 221 XXXMVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPXX 280 # MVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHP # Sbjct: 221 NQQMVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPGS 280 # # Query: 281 XXXXXXXXXXXXXXXXXNLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQR 340 # NLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQR # Sbjct: 281 SGQQLQGMQAMGMMGSLNLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQR 340 # # Query: 341 TSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFR 386 # TSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFR # Sbjct: 341 TSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFR 386 # # # # Score = 322 bits (826), Expect = 1e-87 # Identities = 168/199 (84%), Positives = 168/199 (84%) # # Query: 485 PRMLSHAGQKSVSLTGSQPEAXXXXXXXXXXXXXXXXEATNQLLGKRKIQDLVSQVDVHA 544 # PRMLSHAGQKSVSLTGSQPEA EATNQLLGKRKIQDLVSQVDVHA # Sbjct: 485 PRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDVHA 544 # # Query: 545 KXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSE 604 # K FIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSE # Sbjct: 545 KLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSE 604 # # Query: 605 DKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQSS 664 # DKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQSS # Sbjct: 605 DKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQSS 664 # # Query: 665 EQLVSQTSGPHILQHMTRY 683 # EQLVSQTSGPHILQHMTRY # Sbjct: 665 EQLVSQTSGPHILQHMTRY 683 # # # # Score = 35.4 bits (80), Expect = 0.42 # Identities = 50/194 (25%), Positives = 72/194 (36%), Gaps = 44/194 (22%) # # Query: 199 QQAGLYGTMNFXXXXXXXXXXXXXXMVNPNMSRAGLVGQ----SGHLPMLNGAAGAAQMN 254 # Q G+ G++N +NP R L Q S + L + A MN # Sbjct: 289 QAMGMMGSLNLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMN 348 # # Query: 255 IQPQLLAASPRQKSGMVQGSQFHPXXXXXXXXXXXXXXXXXXXNLTSQMRG--NPALYAQ 312 # PQL + ++GM+Q S QM G +P + # Sbjct: 349 --PQLSGLAQNGQAGMMQNS-------------------LSQQQWLKQMSGITSPNSF-- 385 # # Query: 313 QRINPGQ-----MRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGL----AQNGQAGMM 363 # R+ P Q ++QQ QQ L+SPQ+ SS++ Q+S + Q Q G # Sbjct: 386 -RLQPSQRQALLLQQQQQQQQQLSSPQLHQ----SSMSLNQQQISQIIQQQQQQSQLGQS 440 # # Query: 364 Q-NSLSQQQWLKQM 376 # Q N QQ L+QM # Sbjct: 441 QMNQSHSQQQLQQM 454 # # # >At3g10070 # Length = 539 # # Score = 99.0 bits (245), Expect = 3e-20 # Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%) # # Query: 525 NQLLGKRKIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPK 584 # +++LGKR I +L+ Q+D K F++S+T+F CSLAKHRKS +LE K # Sbjct: 397 DRILGKRSIHELLQQIDPSEKLDPEVEDILSDIAEDFVESITTFGCSLAKHRKSDILEAK 456 # # Query: 585 DILLHLEKNLHLTIPGFSSED-KRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKET 643 # DILLH+E+N ++ PGFSS++ K K + TD+HK+RLA ++ S T A+N++ # Sbjct: 457 DILLHVERNWNIRPPGFSSDEFKTFRKPLTTDIHKERLAAIK----KSVTATEAANARNQ 512 # # Query: 644 MRQAMVNPNG 653 # N G # Sbjct: 513 FGHGTANARG 522 # # # >Hs5032153 # Length = 161 # # Score = 88.6 bits (218), Expect = 4e-17 # Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 1/102 (0%) # # Query: 525 NQLLGKRKIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPK 584 # NQ+L K+K+QDLV +VD + + FI+SV + AC LA+HRKSS LE K # Sbjct: 55 NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114 # # Query: 585 DILLHLEKNLHLTIPGFSSEDKR-QTKTVPTDLHKKRLAMVR 625 # D+ LHLE+ ++ IPGF SE+ R K T+ HK+R+A++R # Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156 # # # >SPAC15A10.02 # Length = 450 # # Score = 85.1 bits (209), Expect = 5e-16 # Identities = 42/98 (42%), Positives = 62/98 (62%), Gaps = 2/98 (2%) # # Query: 525 NQLLGKRKIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPK 584 # N+LL KRK+ DL+ Q+D K F++SVT+FAC LAKHRKS L+ + # Sbjct: 340 NRLLSKRKLHDLLQQIDSEEKIEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDVR 399 # # Query: 585 DILLHLEKNLHLTIPGFSSED--KRQTKTVPTDLHKKR 620 # D+ LHLE+N ++ +PGF+S+D K KT PT ++++ # Sbjct: 400 DVQLHLERNWNIRLPGFASDDIVKSARKTGPTPSYQQK 437 # # # >YDR145w # Length = 539 # # Score = 67.4 bits (163), Expect = 1e-10 # Identities = 38/107 (35%), Positives = 61/107 (56%), Gaps = 6/107 (5%) # # Query: 524 TNQLLGKRKIQDLVSQV-----DVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKS 578 # T +++ KRK+++LV V D F+ +VT+F+C LAKHRKS # Sbjct: 411 TQRVMSKRKLRELVKTVGIDEGDGETVIDGDVEELLLDLADDFVTNVTAFSCRLAKHRKS 470 # # Query: 579 SVLEPKDILLHLEKNLHLTIPGFSSEDKRQT-KTVPTDLHKKRLAMV 624 # LE +DI LHLE+N ++ IPG+S+++ R T K P+ + ++L + # Sbjct: 471 DNLEARDIQLHLERNWNIRIPGYSADEIRSTRKWNPSQNYNQKLQSI 517 # # # >7299489 # Length = 196 # # Score = 62.4 bits (150), Expect = 3e-09 # Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 1/104 (0%) # # Query: 527 LLGKRKIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPKDI 586 # +L K ++ +LV +VD + F++ + AKHRKS+ +E +D+ # Sbjct: 91 MLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDV 150 # # Query: 587 LLHLEKNLHLTIPGFSSEDKRQTK-TVPTDLHKKRLAMVRALLE 629 # LH E+ ++ IPGF +++ R K T+ HK+RLA++R ++ # Sbjct: 151 QLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIK 194 # # # >7293734 # Length = 2328 # # Score = 40.8 bits (94), Expect = 0.010 # Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 24/103 (23%) # # Query: 302 QMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLS--------- 352 # Q + NP QQ++NP Q Q ++ NA+ QN Q+ MNP # Sbjct: 2152 QQQMNPNQMRQQQMNPQQNPQSVAAFNAMQQQPQQNAQQQQ----MNPNQQQQQQFMRGG 2207 # # Query: 353 ----GLAQN-------GQAGMMQNSLSQQQWLKQMSGITSPNS 384 # G+A N G GM QN + QQQ + M G+ +PN+ # Sbjct: 2208 NMRPGMAPNQMNQMNMGGQGMSQNPMMQQQIPQNMVGMVNPNA 2250 # # # # Score = 33.5 bits (75), Expect = 1.6 # Identities = 23/76 (30%), Positives = 33/76 (43%) # # Query: 301 SQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQA 360 # +Q P QQ++ Q +QQ QQ + Q+Q Q M + A N # Sbjct: 1947 AQQPQQPQNVQQQQLQQQQQQQQHMQQQHMQQQQMQPNQMGQMPMNMPMNMQQFAPNPNN 2006 # # Query: 361 GMMQNSLSQQQWLKQM 376 # M QN++ QQQ +QM # Sbjct: 2007 MMQQNAMLQQQQQQQM 2022 # # # >CE22575 # Length = 280 # # Score = 37.7 bits (86), Expect = 0.085 # Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 10/104 (9%) # # Query: 532 KIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPKDILLHLE 591 # K+ DL+ Q+ F+ S+ AC + K+R+ +E +DI L+ # Sbjct: 171 KLDDLMQQISSTTVLEENVKDVLVEYADDFVSSLIDKACKMIKNREVKKIESRDIEFILK 230 # # Query: 592 KNLHLTI------PGFSSE----DKRQTKTVPTDLHKKRLAMVR 625 # ++ + F S+ D + K VPT+ HK+R+A+++ # Sbjct: 231 NVYNMPVVPRAASHNFGSQTEVIDLSKEKFVPTEAHKQRVALLK 274 # # # >YMR043w # Length = 286 # # Score = 33.9 bits (76), Expect = 1.2 # Identities = 35/145 (24%), Positives = 50/145 (34%), Gaps = 36/145 (24%) # # Query: 239 GHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPXXXXXXXXXXXXXXXXXXXN 298 # GHL AGA + ++ QLL + ++ M+Q Q H # Sbjct: 146 GHLNQDQVPAGALKQEVKSQLLGGANPNQNSMIQQQQHH--------------------- 184 # # Query: 299 LTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNG 358 # P QQ Q +QQ+SQQ P+ Q +PQ S Q # Sbjct: 185 ---TQNSQPQQQQQQ-----QPQQQMSQQQMSQHPRPQQ-------GIPHPQQSQPQQQQ 229 # # Query: 359 QAGMMQNSLSQQQWLKQMSGITSPN 383 # Q QQQ + ++GI P+ # Sbjct: 230 QQQQQLQQQQQQQQQQPLTGIHQPH 254 # # # >At1g30330 # Length = 933 # # Score = 33.9 bits (76), Expect = 1.2 # Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 4/80 (5%) # # Query: 302 QMRGNPALYAQQR--INPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQ 359 # Q + +P Q + P ++QQLSQQ S Q Q Q+ S QLS Q # Sbjct: 462 QFQNSPGFSMQSPSLVQPQMLQQQLSQQQQQLSQQQQQQQQLSQQ--QQQQLSQQQQQQL 519 # # Query: 360 AGMMQNSLSQQQWLKQMSGI 379 # + Q LSQQQ + G+ # Sbjct: 520 SQQQQQQLSQQQQQQAYLGV 539 # # # >At1g19220 # Length = 1086 # # Score = 32.3 bits (72), Expect = 3.6 # Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 11/96 (11%) # # Query: 298 NLTSQMRGNPALYAQQRINPGQ------MRQQLSQQNAL----TSPQVQNLQRTSSLAFM 347 # +++ QM+ PA+ Q+ Q +QQL QQ L Q Q + ++A # Sbjct: 480 HISQQMQAQPAMVKSQQQQQQQQQQHQHQQQQLQQQQQLQMSQQQVQQQGIYNNGTIAVA 539 # # Query: 348 NPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPN 383 # N Q+S + N G Q+ L QQ L + +T N # Sbjct: 540 N-QVSCQSPNQPTGFSQSQLQQQSMLPTGAKMTHQN 574 # # # >Hs4505197 # Length = 5262 # # Score = 32.0 bits (71), Expect = 4.7 # Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 3/74 (4%) # # Query: 302 QMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAG 361 # Q++ L QQ++ Q +QQL QQ L Q+Q Q+ L Q L Q Q # Sbjct: 3624 QLQQQQQLQQQQQLQQ-QQQQQLQQQQQLQQQQLQQQQQQQQL--QQQQQQQLQQQQQQL 3680 # # Query: 362 MMQNSLSQQQWLKQ 375 # Q QQQ+ +Q # Sbjct: 3681 QQQQQQQQQQFQQQ 3694 # # # >Hs22061021 # Length = 858 # # Score = 32.0 bits (71), Expect = 4.7 # Identities = 26/101 (25%), Positives = 45/101 (43%), Gaps = 5/101 (4%) # # Query: 571 SLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSEDKRQTKTVPTDLHKKRLAMVRALLES 630 # +L ++R +PK+ LL K++H +++ TK + + ALL+ # Sbjct: 534 TLTRNRVRQPEKPKEDLLKSSKSMHNVTHNLEEDEEEVTKRNSPSGTTTKSVSIAALLDV 593 # # Query: 631 SKPETNASNSKETMRQAMVNPNGPNHLLRPSQSSEQLVSQT 671 # +K E+N KE + V P+ L + SQ L+S T # Sbjct: 594 NKEESN----KELASKKEVK-GSPSFLKKGSQKLRSLLSLT 629 # # # >7303237 # Length = 1594 # # Score = 32.0 bits (71), Expect = 4.7 # Identities = 21/65 (32%), Positives = 30/65 (45%), Gaps = 2/65 (3%) # # Query: 312 QQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQ 371 # Q ++ P QM+QQL +Q Q Q Q A N Q+ L Q Q+G N ++ Q # Sbjct: 1407 QMQLTPAQMQQQLMRQQ--QQQQQQQQQHMGPGAANNMQMQQLLQQQQSGGGGNMMASQM 1464 # # Query: 372 WLKQM 376 # + M # Sbjct: 1465 QMTSM 1469 # # # >ECU10g0930 # Length = 548 # # Score = 31.6 bits (70), Expect = 6.1 # Identities = 13/46 (28%), Positives = 25/46 (54%) # # Query: 561 FIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSEDK 606 # F+D + +C+LA HR+ +E D+ L L+ + + +P + K # Sbjct: 497 FVDHIIHMSCALAYHRQKDTVEVCDVKLALKTEVGIELPSDDVDPK 542 # # # >CE03633 # Length = 2251 # # Score = 31.6 bits (70), Expect = 6.1 # Identities = 26/71 (36%), Positives = 30/71 (41%), Gaps = 1/71 (1%) # # Query: 301 SQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQA 360 # SQ A QQ+ Q QQLSQQ A Q+Q LQ L QL Q # Sbjct: 262 SQQSQVQAQLQQQQQLQQQQAQQLSQQQAQQQQQLQQLQLQQFLQ-QQQQLHQQRAAAQQ 320 # # Query: 361 GMMQNSLSQQQ 371 # QN+ SQQ+ # Sbjct: 321 AQAQNNASQQR 331 # # # >7294427 # Length = 1798 # # Score = 31.6 bits (70), Expect = 6.1 # Identities = 25/73 (34%), Positives = 38/73 (51%), Gaps = 5/73 (6%) # # Query: 312 QQRINPGQM--RQQLSQQNALTSPQV--QNLQRTSSLAFMNP-QLSGLAQNGQAGMMQNS 366 # QQ+I Q+ +QQ QQ+ SPQ+ Q+L R + N QL + Q+GQA Q # Sbjct: 10 QQQIVQQQVVQQQQPQQQSVPVSPQIIHQHLMRQQQILNQNQMQLQQIVQSGQALTPQQQ 69 # # Query: 367 LSQQQWLKQMSGI 379 # Q+Q +Q+ + # Sbjct: 70 QQQRQIQQQLQQV 82 # # # >At1g25540 # Length = 534 # # Score = 31.2 bits (69), Expect = 8.0 # Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%) # # Query: 319 QMRQQLSQQNALTSPQV--QNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQM 376 # Q +QQ QQ+ LT Q Q Q+ S L M Q S L Q Q N + QQQ +QM # Sbjct: 443 QQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQTSPLNQMQQQQQPQQM 502 # # Database: kyvama Posted date: Nov 8, 2002 2:42 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Lambda K H 0.312 0.124 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,200,709 Number of Sequences: 112920 Number of extensions: 904261 Number of successful extensions: 2802 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 2737 Number of HSP's gapped (non-prelim): 62 length of query: 683 length of database: 47,500,486 effective HSP length: 116 effective length of query: 567 effective length of database: 34,401,766 effective search space: 19505801322 effective search space used: 19505801322 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 69 (31.2 bits) S2: 69 (31.2 bits)