At1g17440    COGs   unmask       Genbank       Blink

10
proteins
K KOG1142 Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA)

18 hits
       683 letters
ath   883 =  At1g17440 (683)       =
ath   245 =  At3g10070 (539)       =
hsa   218 =  Hs5032153 (161)       =
spo   209 =  SPAC15A10.02 (450)     =
sce   163 =  YDR145w (539)         =
dme   150 =  7299489 (196)         =

dme 94 _ 7293734 (2328) KOG3598 cel 86 = CE22575 (280) = sce 76 _ YMR043w (286) KOG0015 ath 76 At1g30330 (933) ath 72 At1g19220 (1086) hsa 71 _ Hs4505197 (5262) KOG4443 hsa 71 Hs22061021 (858) dme 71 7303237 (1594) ecu 70 = ECU10g0930 (548) = cel 70 _ CE03633 (2251) KOG1721 dme 70 _ 7294427 (1798) KOG2043 ath 69 At1g25540 (534)

BLASTP 2.2.4 [Aug-26-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At1g17440
         (683 letters)

Database: kyvama 
           112,920 sequences; 47,500,486 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g17440                                                             344   3e-94
At3g10070                                                              99   3e-20
Hs5032153                                                              89   4e-17
SPAC15A10.02                                                           85   5e-16
YDR145w                                                                67   1e-10
7299489                                                                62   3e-09
7293734                                                                41   0.010
CE22575                                                                38   0.085
YMR043w                                                                34   1.2  
At1g30330                                                              34   1.2  
At1g19220                                                              32   3.6  
Hs4505197                                                              32   4.7  
Hs22061021                                                             32   4.7  
7303237                                                                32   4.7  
ECU10g0930                                                             32   6.1  
CE03633                                                                32   6.1  
7294427                                                                32   6.1  
At1g25540                                                              31   8.0  

# >At1g17440
#           Length = 683
# 
#  Score =  344 bits (883), Expect = 3e-94
#  Identities = 200/346 (57%), Positives = 200/346 (57%)
# 
# Query: 41  LMTAPISNSVNSAASPAMTVTTTEGIVXXXXXXXXXXXXXXXXXXXXXGAQIXXXXXXXX 100
#            LMTAPISNSVNSAASPAMTVTTTEGIV                     GAQI        
# Sbjct: 41  LMTAPISNSVNSAASPAMTVTTTEGIVIQNNSQPNISSPNPTSSNPPIGAQIPSPSPLSH 100
# 
# Query: 101 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPM 160
#                                                                      PM
# Sbjct: 101 PSSSLDQQTQTQQLVQQTQQLPQQQQQIMQQISSSPIPQLSPQQQQILQQQHMTSQQIPM 160
# 
# Query: 161 SSYQIAXXXXXXXXXXXXXXXXXXXXXXXXXXYGNVLRQQAGLYGTMNFXXXXXXXXXXX 220
#            SSYQIA                          YGNVLRQQAGLYGTMNF           
# Sbjct: 161 SSYQIAQSLQRSPSLSRLSQIQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQ 220
# 
# Query: 221 XXXMVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPXX 280
#               MVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHP  
# Sbjct: 221 NQQMVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPGS 280
# 
# Query: 281 XXXXXXXXXXXXXXXXXNLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQR 340
#                             NLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQR
# Sbjct: 281 SGQQLQGMQAMGMMGSLNLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQR 340
# 
# Query: 341 TSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFR 386
#            TSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFR
# Sbjct: 341 TSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPNSFR 386
# 
# 
# 
#  Score =  322 bits (826), Expect = 1e-87
#  Identities = 168/199 (84%), Positives = 168/199 (84%)
# 
# Query: 485 PRMLSHAGQKSVSLTGSQPEAXXXXXXXXXXXXXXXXEATNQLLGKRKIQDLVSQVDVHA 544
#            PRMLSHAGQKSVSLTGSQPEA                EATNQLLGKRKIQDLVSQVDVHA
# Sbjct: 485 PRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDVHA 544
# 
# Query: 545 KXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSE 604
#            K               FIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSE
# Sbjct: 545 KLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSE 604
# 
# Query: 605 DKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQSS 664
#            DKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQSS
# Sbjct: 605 DKRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQSS 664
# 
# Query: 665 EQLVSQTSGPHILQHMTRY 683
#            EQLVSQTSGPHILQHMTRY
# Sbjct: 665 EQLVSQTSGPHILQHMTRY 683
# 
# 
# 
#  Score = 35.4 bits (80), Expect = 0.42
#  Identities = 50/194 (25%), Positives = 72/194 (36%), Gaps = 44/194 (22%)
# 
# Query: 199 QQAGLYGTMNFXXXXXXXXXXXXXXMVNPNMSRAGLVGQ----SGHLPMLNGAAGAAQMN 254
#            Q  G+ G++N                +NP   R  L  Q    S  +  L   +  A MN
# Sbjct: 289 QAMGMMGSLNLTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMN 348
# 
# Query: 255 IQPQLLAASPRQKSGMVQGSQFHPXXXXXXXXXXXXXXXXXXXNLTSQMRG--NPALYAQ 312
#              PQL   +   ++GM+Q S                           QM G  +P  +  
# Sbjct: 349 --PQLSGLAQNGQAGMMQNS-------------------LSQQQWLKQMSGITSPNSF-- 385
# 
# Query: 313 QRINPGQ-----MRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGL----AQNGQAGMM 363
#             R+ P Q     ++QQ  QQ  L+SPQ+      SS++    Q+S +     Q  Q G  
# Sbjct: 386 -RLQPSQRQALLLQQQQQQQQQLSSPQLHQ----SSMSLNQQQISQIIQQQQQQSQLGQS 440
# 
# Query: 364 Q-NSLSQQQWLKQM 376
#            Q N    QQ L+QM
# Sbjct: 441 QMNQSHSQQQLQQM 454
# 
# 
# >At3g10070
#           Length = 539
# 
#  Score = 99.0 bits (245), Expect = 3e-20
#  Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
# 
# Query: 525 NQLLGKRKIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPK 584
#            +++LGKR I +L+ Q+D   K               F++S+T+F CSLAKHRKS +LE K
# Sbjct: 397 DRILGKRSIHELLQQIDPSEKLDPEVEDILSDIAEDFVESITTFGCSLAKHRKSDILEAK 456
# 
# Query: 585 DILLHLEKNLHLTIPGFSSED-KRQTKTVPTDLHKKRLAMVRALLESSKPETNASNSKET 643
#            DILLH+E+N ++  PGFSS++ K   K + TD+HK+RLA ++     S   T A+N++  
# Sbjct: 457 DILLHVERNWNIRPPGFSSDEFKTFRKPLTTDIHKERLAAIK----KSVTATEAANARNQ 512
# 
# Query: 644 MRQAMVNPNG 653
#                  N  G
# Sbjct: 513 FGHGTANARG 522
# 
# 
# >Hs5032153
#           Length = 161
# 
#  Score = 88.6 bits (218), Expect = 4e-17
#  Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
# 
# Query: 525 NQLLGKRKIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPK 584
#            NQ+L K+K+QDLV +VD + +               FI+SV + AC LA+HRKSS LE K
# Sbjct: 55  NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114
# 
# Query: 585 DILLHLEKNLHLTIPGFSSEDKR-QTKTVPTDLHKKRLAMVR 625
#            D+ LHLE+  ++ IPGF SE+ R   K   T+ HK+R+A++R
# Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156
# 
# 
# >SPAC15A10.02
#           Length = 450
# 
#  Score = 85.1 bits (209), Expect = 5e-16
#  Identities = 42/98 (42%), Positives = 62/98 (62%), Gaps = 2/98 (2%)
# 
# Query: 525 NQLLGKRKIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPK 584
#            N+LL KRK+ DL+ Q+D   K               F++SVT+FAC LAKHRKS  L+ +
# Sbjct: 340 NRLLSKRKLHDLLQQIDSEEKIEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDVR 399
# 
# Query: 585 DILLHLEKNLHLTIPGFSSED--KRQTKTVPTDLHKKR 620
#            D+ LHLE+N ++ +PGF+S+D  K   KT PT  ++++
# Sbjct: 400 DVQLHLERNWNIRLPGFASDDIVKSARKTGPTPSYQQK 437
# 
# 
# >YDR145w
#           Length = 539
# 
#  Score = 67.4 bits (163), Expect = 1e-10
#  Identities = 38/107 (35%), Positives = 61/107 (56%), Gaps = 6/107 (5%)
# 
# Query: 524 TNQLLGKRKIQDLVSQV-----DVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKS 578
#            T +++ KRK+++LV  V     D                   F+ +VT+F+C LAKHRKS
# Sbjct: 411 TQRVMSKRKLRELVKTVGIDEGDGETVIDGDVEELLLDLADDFVTNVTAFSCRLAKHRKS 470
# 
# Query: 579 SVLEPKDILLHLEKNLHLTIPGFSSEDKRQT-KTVPTDLHKKRLAMV 624
#              LE +DI LHLE+N ++ IPG+S+++ R T K  P+  + ++L  +
# Sbjct: 471 DNLEARDIQLHLERNWNIRIPGYSADEIRSTRKWNPSQNYNQKLQSI 517
# 
# 
# >7299489
#           Length = 196
# 
#  Score = 62.4 bits (150), Expect = 3e-09
#  Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
# 
# Query: 527 LLGKRKIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPKDI 586
#            +L K ++ +LV +VD   +               F++       + AKHRKS+ +E +D+
# Sbjct: 91  MLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDV 150
# 
# Query: 587 LLHLEKNLHLTIPGFSSEDKRQTK-TVPTDLHKKRLAMVRALLE 629
#             LH E+  ++ IPGF +++ R  K    T+ HK+RLA++R  ++
# Sbjct: 151 QLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIK 194
# 
# 
# >7293734
#           Length = 2328
# 
#  Score = 40.8 bits (94), Expect = 0.010
#  Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 24/103 (23%)
# 
# Query: 302  QMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLS--------- 352
#             Q + NP    QQ++NP Q  Q ++  NA+     QN Q+      MNP            
# Sbjct: 2152 QQQMNPNQMRQQQMNPQQNPQSVAAFNAMQQQPQQNAQQQQ----MNPNQQQQQQFMRGG 2207
# 
# Query: 353  ----GLAQN-------GQAGMMQNSLSQQQWLKQMSGITSPNS 384
#                 G+A N       G  GM QN + QQQ  + M G+ +PN+
# Sbjct: 2208 NMRPGMAPNQMNQMNMGGQGMSQNPMMQQQIPQNMVGMVNPNA 2250
# 
# 
# 
#  Score = 33.5 bits (75), Expect = 1.6
#  Identities = 23/76 (30%), Positives = 33/76 (43%)
# 
# Query: 301  SQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQA 360
#             +Q    P    QQ++   Q +QQ  QQ  +   Q+Q  Q       M   +   A N   
# Sbjct: 1947 AQQPQQPQNVQQQQLQQQQQQQQHMQQQHMQQQQMQPNQMGQMPMNMPMNMQQFAPNPNN 2006
# 
# Query: 361  GMMQNSLSQQQWLKQM 376
#              M QN++ QQQ  +QM
# Sbjct: 2007 MMQQNAMLQQQQQQQM 2022
# 
# 
# >CE22575
#           Length = 280
# 
#  Score = 37.7 bits (86), Expect = 0.085
#  Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
# 
# Query: 532 KIQDLVSQVDVHAKXXXXXXXXXXXXXXXFIDSVTSFACSLAKHRKSSVLEPKDILLHLE 591
#            K+ DL+ Q+                    F+ S+   AC + K+R+   +E +DI   L+
# Sbjct: 171 KLDDLMQQISSTTVLEENVKDVLVEYADDFVSSLIDKACKMIKNREVKKIESRDIEFILK 230
# 
# Query: 592 KNLHLTI------PGFSSE----DKRQTKTVPTDLHKKRLAMVR 625
#               ++ +        F S+    D  + K VPT+ HK+R+A+++
# Sbjct: 231 NVYNMPVVPRAASHNFGSQTEVIDLSKEKFVPTEAHKQRVALLK 274
# 
# 
# >YMR043w
#           Length = 286
# 
#  Score = 33.9 bits (76), Expect = 1.2
#  Identities = 35/145 (24%), Positives = 50/145 (34%), Gaps = 36/145 (24%)
# 
# Query: 239 GHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPXXXXXXXXXXXXXXXXXXXN 298
#            GHL      AGA +  ++ QLL  +   ++ M+Q  Q H                     
# Sbjct: 146 GHLNQDQVPAGALKQEVKSQLLGGANPNQNSMIQQQQHH--------------------- 184
# 
# Query: 299 LTSQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNG 358
#                    P    QQ     Q +QQ+SQQ     P+ Q           +PQ S   Q  
# Sbjct: 185 ---TQNSQPQQQQQQ-----QPQQQMSQQQMSQHPRPQQ-------GIPHPQQSQPQQQQ 229
# 
# Query: 359 QAGMMQNSLSQQQWLKQMSGITSPN 383
#            Q         QQQ  + ++GI  P+
# Sbjct: 230 QQQQQLQQQQQQQQQQPLTGIHQPH 254
# 
# 
# >At1g30330
#           Length = 933
# 
#  Score = 33.9 bits (76), Expect = 1.2
#  Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
# 
# Query: 302 QMRGNPALYAQQR--INPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQ 359
#            Q + +P    Q    + P  ++QQLSQQ    S Q Q  Q+ S       QLS   Q   
# Sbjct: 462 QFQNSPGFSMQSPSLVQPQMLQQQLSQQQQQLSQQQQQQQQLSQQ--QQQQLSQQQQQQL 519
# 
# Query: 360 AGMMQNSLSQQQWLKQMSGI 379
#            +   Q  LSQQQ  +   G+
# Sbjct: 520 SQQQQQQLSQQQQQQAYLGV 539
# 
# 
# >At1g19220
#           Length = 1086
# 
#  Score = 32.3 bits (72), Expect = 3.6
#  Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
# 
# Query: 298 NLTSQMRGNPALYAQQRINPGQ------MRQQLSQQNAL----TSPQVQNLQRTSSLAFM 347
#            +++ QM+  PA+   Q+    Q       +QQL QQ  L       Q Q +    ++A  
# Sbjct: 480 HISQQMQAQPAMVKSQQQQQQQQQQHQHQQQQLQQQQQLQMSQQQVQQQGIYNNGTIAVA 539
# 
# Query: 348 NPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPN 383
#            N Q+S  + N   G  Q+ L QQ  L   + +T  N
# Sbjct: 540 N-QVSCQSPNQPTGFSQSQLQQQSMLPTGAKMTHQN 574
# 
# 
# >Hs4505197
#           Length = 5262
# 
#  Score = 32.0 bits (71), Expect = 4.7
#  Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
# 
# Query: 302  QMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAG 361
#             Q++    L  QQ++   Q +QQL QQ  L   Q+Q  Q+   L     Q   L Q  Q  
# Sbjct: 3624 QLQQQQQLQQQQQLQQ-QQQQQLQQQQQLQQQQLQQQQQQQQL--QQQQQQQLQQQQQQL 3680
# 
# Query: 362  MMQNSLSQQQWLKQ 375
#               Q    QQQ+ +Q
# Sbjct: 3681 QQQQQQQQQQFQQQ 3694
# 
# 
# >Hs22061021
#           Length = 858
# 
#  Score = 32.0 bits (71), Expect = 4.7
#  Identities = 26/101 (25%), Positives = 45/101 (43%), Gaps = 5/101 (4%)
# 
# Query: 571 SLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSEDKRQTKTVPTDLHKKRLAMVRALLES 630
#            +L ++R     +PK+ LL   K++H        +++  TK         +   + ALL+ 
# Sbjct: 534 TLTRNRVRQPEKPKEDLLKSSKSMHNVTHNLEEDEEEVTKRNSPSGTTTKSVSIAALLDV 593
# 
# Query: 631 SKPETNASNSKETMRQAMVNPNGPNHLLRPSQSSEQLVSQT 671
#            +K E+N    KE   +  V    P+ L + SQ    L+S T
# Sbjct: 594 NKEESN----KELASKKEVK-GSPSFLKKGSQKLRSLLSLT 629
# 
# 
# >7303237
#           Length = 1594
# 
#  Score = 32.0 bits (71), Expect = 4.7
#  Identities = 21/65 (32%), Positives = 30/65 (45%), Gaps = 2/65 (3%)
# 
# Query: 312  QQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQ 371
#             Q ++ P QM+QQL +Q      Q Q  Q     A  N Q+  L Q  Q+G   N ++ Q 
# Sbjct: 1407 QMQLTPAQMQQQLMRQQ--QQQQQQQQQHMGPGAANNMQMQQLLQQQQSGGGGNMMASQM 1464
# 
# Query: 372  WLKQM 376
#              +  M
# Sbjct: 1465 QMTSM 1469
# 
# 
# >ECU10g0930
#           Length = 548
# 
#  Score = 31.6 bits (70), Expect = 6.1
#  Identities = 13/46 (28%), Positives = 25/46 (54%)
# 
# Query: 561 FIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSEDK 606
#            F+D +   +C+LA HR+   +E  D+ L L+  + + +P    + K
# Sbjct: 497 FVDHIIHMSCALAYHRQKDTVEVCDVKLALKTEVGIELPSDDVDPK 542
# 
# 
# >CE03633
#           Length = 2251
# 
#  Score = 31.6 bits (70), Expect = 6.1
#  Identities = 26/71 (36%), Positives = 30/71 (41%), Gaps = 1/71 (1%)
# 
# Query: 301 SQMRGNPALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQA 360
#            SQ     A   QQ+    Q  QQLSQQ A    Q+Q LQ    L     QL       Q 
# Sbjct: 262 SQQSQVQAQLQQQQQLQQQQAQQLSQQQAQQQQQLQQLQLQQFLQ-QQQQLHQQRAAAQQ 320
# 
# Query: 361 GMMQNSLSQQQ 371
#               QN+ SQQ+
# Sbjct: 321 AQAQNNASQQR 331
# 
# 
# >7294427
#           Length = 1798
# 
#  Score = 31.6 bits (70), Expect = 6.1
#  Identities = 25/73 (34%), Positives = 38/73 (51%), Gaps = 5/73 (6%)
# 
# Query: 312 QQRINPGQM--RQQLSQQNALTSPQV--QNLQRTSSLAFMNP-QLSGLAQNGQAGMMQNS 366
#            QQ+I   Q+  +QQ  QQ+   SPQ+  Q+L R   +   N  QL  + Q+GQA   Q  
# Sbjct: 10  QQQIVQQQVVQQQQPQQQSVPVSPQIIHQHLMRQQQILNQNQMQLQQIVQSGQALTPQQQ 69
# 
# Query: 367 LSQQQWLKQMSGI 379
#              Q+Q  +Q+  +
# Sbjct: 70  QQQRQIQQQLQQV 82
# 
# 
# >At1g25540
#           Length = 534
# 
#  Score = 31.2 bits (69), Expect = 8.0
#  Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
# 
# Query: 319 QMRQQLSQQNALTSPQV--QNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQM 376
#            Q +QQ  QQ+ LT  Q   Q  Q+ S L  M  Q S L Q  Q     N + QQQ  +QM
# Sbjct: 443 QQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQTSPLNQMQQQQQPQQM 502
# 
# 
  Database: kyvama
    Posted date:  Nov 8, 2002  2:42 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920
  
Lambda     K      H
   0.312    0.124    0.341 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,200,709
Number of Sequences: 112920
Number of extensions: 904261
Number of successful extensions: 2802
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2737
Number of HSP's gapped (non-prelim): 62
length of query: 683
length of database: 47,500,486
effective HSP length: 116
effective length of query: 567
effective length of database: 34,401,766
effective search space: 19505801322
effective search space used: 19505801322
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)
S2: 69 (31.2 bits)