Positive transcription elongation factor/ zinc ion binding (AT5G08565)

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UGID:17497 UniGene At.32557 Arabidopsis thaliana (thale cress) AT5G08565

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Positive transcription elongation factor/ zinc ion binding (AT5G08565)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_568201.1	positive transcription elongation factor/ zinc ion binding	A. thaliana	100.0	115

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	mixed; flower

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_120943.3	Arabidopsis thaliana positive transcription elongation factor/ zinc ion binding (AT5G08565) mRNA, complete cds	P
AY086462.1	Arabidopsis thaliana clone 252311 mRNA, complete sequence	P
BX833768.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZA12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	P
BT024785.1	Arabidopsis thaliana At5g08565 gene, complete cds	P
AK228575.1	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL15-32-L16	PA

EST sequences (13)

AU227931.1	Clone RAFL15-32-L16	mixed	3' read
AU236926.2	Clone RAFL15-32-L16	mixed	5' read	P
DR293720.1	Clone 252311	mixed	5' read	P
DR293721.1	Clone 250496	mixed	5' read	P
DR293722.1	Clone 249042	mixed	5' read	P
DR381732.1	Clone 252311	mixed	3' read	PA
EG482831.1		mixed		A
EG482842.1		mixed		A
ES058778.1		flower
ES005362.1		flower
ES029470.1		flower
ES045912.1		flower
ES058948.1		flower

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria