BLASTP 2.2.18 [Mar-02-2008]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= SPy_1511 hypothetical protein
(100 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,515,104 sequences; 2,222,278,849 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_269587.1| hypothetical protein SPy_1511 [Streptococc... 204 2e-51
ref|NP_607599.1| hypothetical protein spyM18_1529 [Streptoc... 203 3e-51
ref|YP_596968.1| hypothetical cytosolic protein [Streptococ... 202 5e-51
ref|NP_687516.1| hypothetical protein SAG0486 [Streptococcu... 162 9e-39
ref|ZP_00785131.1| conserved hypothetical protein [Streptoc... 161 2e-38
ref|ZP_00782660.1| conserved hypothetical protein [Streptoc... 159 8e-38
ref|ZP_02919788.1| hypothetical protein STRINF_00640 [Strep... 154 2e-36
ref|YP_139121.1| hypothetical protein stu0600 [Streptococcu... 152 6e-36
ref|YP_820104.1| hypothetical protein STER_0646 [Streptococ... 150 2e-35
pdb|2QZI|A Chain A, The Crystal Structure Of A Conserved Pr... 150 3e-35
ref|NP_720995.1| hypothetical protein SMU.560c [Streptococc... 150 3e-35
ref|YP_001197856.1| hypothetical protein SSU05_0490 [Strept... 136 4e-31
ref|YP_001034652.1| Conserved uncharacterized protein [Stre... 131 1e-29
ref|NP_345309.1| hypothetical protein SP_0816 [Streptococcu... 128 9e-29
ref|NP_358314.1| hypothetical protein spr0720 [Streptococcu... 128 1e-28
ref|YP_001449986.1| hypothetical protein SGO_0684 [Streptoc... 126 4e-28
ref|ZP_00603621.1| conserved hypothetical protein [Enteroco... 77 3e-13
ref|NP_814456.1| hypothetical protein EF0705 [Enterococcus ... 74 3e-12
ref|YP_806977.1| hypothetical protein LSEI_1763 [Lactobacil... 69 1e-10
ref|ZP_02184999.1| hypothetical protein CAT7_08315 [Carnoba... 63 6e-09
ref|YP_618665.1| hypothetical protein Ldb0573 [Lactobacillu... 60 4e-08
ref|YP_396075.1| hypothetical protein LSA1466 [Lactobacillu... 60 6e-08
ref|YP_001577120.1| hypothetical protein lhv_0682 [Lactobac... 57 3e-07
ref|YP_815164.1| hypothetical protein LGAS_1364 [Lactobacil... 57 5e-07
ref|NP_964669.1| hypothetical protein LJ0814 [Lactobacillus... 56 6e-07
ref|YP_193547.1| hypothetical protein LBA0637 [Lactobacillu... 54 4e-06
ref|YP_535278.1| hypothetical protein LSL_0385 [Lactobacill... 52 1e-05
ref|ZP_00786737.1| conserved hypothetical protein [Streptoc... 51 2e-05
pir||T34105 hypothetical protein C17G10.8 - Caenorhabditis ... 35 1.1
ref|NP_001021972.1| DeHydrogenases, Short chain family memb... 35 1.1
ref|XP_001680766.1| Hypothetical protein CBG06955 [Caenorha... 33 7.0
ref|XP_001680765.1| Hypothetical protein CBG06958 [Caenorha... 33 7.2
>ref|NP_269587.1| hypothetical protein SPy_1511 [Streptococcus pyogenes M1 GAS]
ref|YP_282605.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
gb|AAK34308.1| hypothetical protein SPy_1511 [Streptococcus pyogenes M1 GAS]
gb|AAZ51860.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
Length = 100
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/100 (100%), Positives = 100/100 (100%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE
Sbjct: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV
Sbjct: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
>ref|NP_607599.1| hypothetical protein spyM18_1529 [Streptococcus pyogenes MGAS8232]
ref|NP_664969.1| hypothetical protein SpyM3_1165 [Streptococcus pyogenes MGAS315]
ref|NP_801959.1| hypothetical protein SPs0697 [Streptococcus pyogenes SSI-1]
ref|YP_060581.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
ref|ZP_00365683.1| hypothetical protein SpyoM01001067 [Streptococcus pyogenes M49 591]
ref|YP_280646.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
ref|YP_598867.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
ref|YP_600856.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
ref|YP_602843.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
ref|YP_001128181.1| hypothetical protein SpyM50610 [Streptococcus pyogenes str.
Manfredo]
gb|AAL98098.1| hypothetical protein [Streptococcus pyogenes MGAS8232]
gb|AAM79772.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
dbj|BAC63792.1| hypothetical protein [Streptococcus pyogenes SSI-1]
gb|AAT87398.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
gb|AAX72291.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
gb|ABF34323.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
gb|ABF36312.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
gb|ABF38299.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
emb|CAM29945.1| hypothetical protein [Streptococcus pyogenes str. Manfredo]
Length = 100
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/100 (99%), Positives = 100/100 (100%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLINTTSSHPELI+NQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE
Sbjct: 1 MRLINTTSSHPELIRNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV
Sbjct: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
>ref|YP_596968.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
gb|ABF32424.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
Length = 100
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/100 (98%), Positives = 100/100 (100%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLINTTSSHPELI+NQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE
Sbjct: 1 MRLINTTSSHPELIRNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
LDIIREFFLKRKIDPKI+IPGQSKTLHTNNLIEISFQTSV
Sbjct: 61 LDIIREFFLKRKIDPKIIIPGQSKTLHTNNLIEISFQTSV 100
>ref|NP_687516.1| hypothetical protein SAG0486 [Streptococcus agalactiae 2603V/R]
ref|NP_734997.1| hypothetical protein gbs0533 [Streptococcus agalactiae NEM316]
ref|YP_329220.1| hypothetical protein SAK_0588 [Streptococcus agalactiae A909]
ref|ZP_00780540.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
ref|ZP_00787760.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
ref|ZP_00790831.1| conserved hypothetical protein [Streptococcus agalactiae 515]
gb|AAM99388.1|AE014214_2 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
emb|CAD46177.1| Unknown [Streptococcus agalactiae NEM316]
gb|ABA44953.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gb|EAO62876.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gb|EAO70436.1| conserved hypothetical protein [Streptococcus agalactiae 515]
gb|EAO73465.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
Length = 100
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 89/100 (89%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLINTTSSHPEL++NQL+NTDA LVEVYSAGNTDV+FT+APKHYELLISNKYRAIK++E
Sbjct: 1 MRLINTTSSHPELVRNQLQNTDAKLVEVYSAGNTDVVFTKAPKHYELLISNKYRAIKDEE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
L+ IREFFLKRKID I+I Q K+LHT LIEIS+ T+
Sbjct: 61 LEAIREFFLKRKIDQSIIIQEQMKSLHTAKLIEISYPTTA 100
>ref|ZP_00785131.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gb|EAO76123.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
Length = 100
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 88/100 (88%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLINTTSSHPEL++NQL+NTDA LVEVYSAGNTDV+FT APKHYELLISNKYRAIK++E
Sbjct: 1 MRLINTTSSHPELVRNQLQNTDAKLVEVYSAGNTDVVFTTAPKHYELLISNKYRAIKDEE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
L+ IREFFLKRKID I+I Q K+LHT LIEIS+ T+
Sbjct: 61 LEAIREFFLKRKIDQSIIIQEQMKSLHTAKLIEISYPTTA 100
>ref|ZP_00782660.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gb|EAO78571.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 100
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 88/100 (88%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRL NTTSSHPEL++NQL+NTDA LVEVYSAGNTDV+FT+APKHYELLISNKYRAIK++E
Sbjct: 1 MRLNNTTSSHPELVRNQLQNTDAKLVEVYSAGNTDVVFTKAPKHYELLISNKYRAIKDEE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
L+ IREFFLKRKID I+I Q K+LHT LIEIS+ T+
Sbjct: 61 LEAIREFFLKRKIDQSIIIQEQMKSLHTAKLIEISYPTTA 100
>ref|ZP_02919788.1| hypothetical protein STRINF_00640 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gb|EDT48073.1| hypothetical protein STRINF_00640 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 100
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 82/96 (85%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLINTTSSH EL++NQL+NTDA LVE YSAGNTDVIFT+AP HYELLISNKYRAIKE E
Sbjct: 1 MRLINTTSSHSELVRNQLRNTDAKLVETYSAGNTDVIFTKAPSHYELLISNKYRAIKESE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISF 96
++ IREFFLKRKID V Q KTLHT NLIEISF
Sbjct: 61 IEAIREFFLKRKIDKSTVQLDQLKTLHTANLIEISF 96
>ref|YP_139121.1| hypothetical protein stu0600 [Streptococcus thermophilus LMG 18311]
ref|YP_141011.1| hypothetical protein str0600 [Streptococcus thermophilus CNRZ1066]
gb|AAV60306.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gb|AAV62196.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 100
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 88/100 (88%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+LINTT +H EL+ NQL NTDA+LVE YSAGNTDV+FTQAPKHYELLISNK+RA+K++E
Sbjct: 1 MKLINTTWTHQELVNNQLDNTDAFLVETYSAGNTDVVFTQAPKHYELLISNKHRAVKDNE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
L++IREFFLKRKID IV+ + +T+HT+ LIEISF T+V
Sbjct: 61 LEVIREFFLKRKIDKDIVLMDKLRTVHTDKLIEISFPTTV 100
>ref|YP_820104.1| hypothetical protein STER_0646 [Streptococcus thermophilus LMD-9]
gb|ABJ65908.1| Uncharacterized conserved protein [Streptococcus thermophilus
LMD-9]
Length = 100
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 88/100 (88%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+LINTT +H +L+ NQL NTDA+LVE YSAGNTDV+FTQAPKHYELLISNK+RA+K++E
Sbjct: 1 MKLINTTWTHQKLVNNQLDNTDAFLVETYSAGNTDVVFTQAPKHYELLISNKHRAVKDNE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
L++IREFFLKRKID IV+ + +T+HT+ LIEISF T+V
Sbjct: 61 LEVIREFFLKRKIDKDIVLMDKLRTVHTDKLIEISFPTTV 100
>pdb|2QZI|A Chain A, The Crystal Structure Of A Conserved Protein Of Unknown
Function From Streptococcus Thermophilus Lmg 18311.
pdb|2QZI|B Chain B, The Crystal Structure Of A Conserved Protein Of Unknown
Function From Streptococcus Thermophilus Lmg 18311.
pdb|2QZI|C Chain C, The Crystal Structure Of A Conserved Protein Of Unknown
Function From Streptococcus Thermophilus Lmg 18311.
pdb|2QZI|D Chain D, The Crystal Structure Of A Conserved Protein Of Unknown
Function From Streptococcus Thermophilus Lmg 18311.
Length = 103
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 87/99 (87%)
Query: 2 RLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDEL 61
+LINTT +H EL+ NQL NTDA+LVE YSAGNTDV+FTQAPKHYELLISNK+RA+K++EL
Sbjct: 5 KLINTTWTHQELVNNQLDNTDAFLVETYSAGNTDVVFTQAPKHYELLISNKHRAVKDNEL 64
Query: 62 DIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
++IREFFLKRKID IV+ + +T+HT+ LIEISF T+V
Sbjct: 65 EVIREFFLKRKIDKDIVLXDKLRTVHTDKLIEISFPTTV 103
>ref|NP_720995.1| hypothetical protein SMU.560c [Streptococcus mutans UA159]
gb|AAN58301.1|AE014901_1 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 108
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 84/95 (88%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLINTTSSH L+KNQLK+TDA LVE YSAGNTDVIFTQAPKHYELLISNK+RAIK++E
Sbjct: 9 MRLINTTSSHQHLVKNQLKHTDATLVETYSAGNTDVIFTQAPKHYELLISNKHRAIKDNE 68
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEIS 95
++ IREFFLKRKI+ I++ Q KTLHT NLIEIS
Sbjct: 69 IETIREFFLKRKINKNIILLDQLKTLHTANLIEIS 103
>ref|YP_001197856.1| hypothetical protein SSU05_0490 [Streptococcus suis 05ZYH33]
ref|YP_001200042.1| hypothetical protein SSU98_0484 [Streptococcus suis 98HAH33]
gb|ABP89456.1| conserved hypothetical protein [Streptococcus suis 05ZYH33]
gb|ABP91642.1| conserved hypothetical protein [Streptococcus suis 98HAH33]
Length = 102
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 82/95 (86%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M++INTT+SHP L+++QL NTDA+LVE YSAGNTDVIFTQAP+HYELLISNKYRA++++E
Sbjct: 1 MKIINTTNSHPNLVQSQLANTDAFLVETYSAGNTDVIFTQAPRHYELLISNKYRAVQQNE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEIS 95
++ IR+FFL RKID + + +T+HT+ LIE+S
Sbjct: 61 IEQIRDFFLHRKIDERTINKAAIQTIHTDRLIEMS 95
>ref|YP_001034652.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
gb|ABN44102.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
Length = 100
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 80/96 (83%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+LINTT+SH +L+K+QL++TDA LVEVYSAGN+DV+FTQAP HYE+LISN +RA++E E
Sbjct: 1 MKLINTTNSHADLVKSQLESTDAILVEVYSAGNSDVVFTQAPLHYEILISNMHRAVREQE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISF 96
++ IREFFLKRKID + +T++ NNLIEIS
Sbjct: 61 IEKIREFFLKRKIDANTIDRAAIRTIYANNLIEISI 96
>ref|NP_345309.1| hypothetical protein SP_0816 [Streptococcus pneumoniae TIGR4]
ref|ZP_01830909.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae
SP18-BS74]
ref|ZP_02710272.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC1087-00]
ref|ZP_02715049.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC0288-04]
gb|AAK74949.1| hypothetical protein SP_0816 [Streptococcus pneumoniae TIGR4]
gb|EDK68250.1| ribose-5-phosphate isomerase A [Streptococcus pneumoniae
SP18-BS74]
gb|EDT91498.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC1087-00]
gb|EDT95313.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC0288-04]
Length = 99
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 79/96 (82%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+LINTT+SH +L+K+QL++TDA LVEVYSAGNTDVIFTQAP HYE+LISNK+RAI+E E
Sbjct: 1 MKLINTTNSHSQLVKSQLESTDATLVEVYSAGNTDVIFTQAPLHYEILISNKHRAIREPE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISF 96
++ I+EFFLKRKID V KTL++ LI IS
Sbjct: 61 IETIQEFFLKRKIDKASVDEANIKTLYSEKLIGISI 96
>ref|NP_358314.1| hypothetical protein spr0720 [Streptococcus pneumoniae R6]
ref|YP_816207.1| hypothetical protein SPD_0714 [Streptococcus pneumoniae D39]
ref|ZP_01818932.1| hypothetical protein CGSSp3BS71_00677 [Streptococcus pneumoniae
SP3-BS71]
ref|ZP_01821509.1| hypothetical protein CGSSp6BS73_00522 [Streptococcus pneumoniae
SP6-BS73]
ref|ZP_01822175.1| hypothetical protein CGSSp9BS68_08677 [Streptococcus pneumoniae
SP9-BS68]
ref|ZP_01824765.1| hypothetical protein CGSSp11BS70_10125 [Streptococcus pneumoniae
SP11-BS70]
ref|ZP_01829298.1| hypothetical protein CGSSp14BS69_06986 [Streptococcus pneumoniae
SP14-BS69]
ref|ZP_01831928.1| hypothetical protein CGSSp19BS75_04362 [Streptococcus pneumoniae
SP19-BS75]
ref|ZP_01835711.1| hypothetical protein CGSSp23BS72_08080 [Streptococcus pneumoniae
SP23-BS72]
ref|ZP_02709425.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC1873-00]
ref|ZP_02714004.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
ref|ZP_02717113.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC3059-06]
ref|ZP_02721408.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
ref|YP_001694274.1| conserved hypothetical protein [Streptococcus pneumoniae
Hungary19A-6]
ref|YP_001835476.1| hypothetical protein SPCG_0759 [Streptococcus pneumoniae CGSP14]
gb|AAK99524.1| Hypothetical protein [Streptococcus pneumoniae R6]
gb|ABJ54118.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
gb|EDK63851.1| hypothetical protein CGSSp11BS70_10125 [Streptococcus pneumoniae
SP11-BS70]
gb|EDK64527.1| hypothetical protein CGSSp14BS69_06986 [Streptococcus pneumoniae
SP14-BS69]
gb|EDK71967.1| hypothetical protein CGSSp19BS75_04362 [Streptococcus pneumoniae
SP19-BS75]
gb|EDK73108.1| hypothetical protein CGSSp3BS71_00677 [Streptococcus pneumoniae
SP3-BS71]
gb|EDK75443.1| hypothetical protein CGSSp6BS73_00522 [Streptococcus pneumoniae
SP6-BS73]
gb|EDK79810.1| hypothetical protein CGSSp9BS68_08677 [Streptococcus pneumoniae
SP9-BS68]
gb|EDK81127.1| hypothetical protein CGSSp23BS72_08080 [Streptococcus pneumoniae
SP23-BS72]
gb|ACA35733.1| conserved hypothetical protein [Streptococcus pneumoniae
Hungary19A-6]
gb|EDT50379.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC1873-00]
gb|ACB90011.1| hypothetical protein SPCG_0759 [Streptococcus pneumoniae CGSP14]
gb|EDT92349.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
gb|EDT97546.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC3059-06]
gb|EDT99013.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
Length = 99
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 79/96 (82%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+LINTT+SH +L+K+QL++TDA LVEVYSAGNTDVIFTQAP HYE+LISNK+RAI+E E
Sbjct: 1 MKLINTTNSHSQLVKSQLESTDATLVEVYSAGNTDVIFTQAPLHYEILISNKHRAIREPE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISF 96
++ I+EFFLKRKID V KTL++ LI IS
Sbjct: 61 IETIQEFFLKRKIDKTSVDEANIKTLYSEKLIGISI 96
>ref|YP_001449986.1| hypothetical protein SGO_0684 [Streptococcus gordonii str.
Challis substr. CH1]
gb|ABV10459.1| conserved hypothetical protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 99
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 79/96 (82%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+LINTT+SH LI++QL++TDA LVE YSAGNTDV+FTQAPKHYE+LI+N +RA++E E
Sbjct: 1 MKLINTTNSHAVLIQSQLESTDATLVETYSAGNTDVVFTQAPKHYEILIANTHRAVREQE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISF 96
++ IR+FFLKRKID K + +T++ + LIEIS
Sbjct: 61 IEKIRDFFLKRKIDTKAIDTAGIQTIYADKLIEISI 96
>ref|ZP_00603621.1| conserved hypothetical protein [Enterococcus faecium DO]
gb|EAN10088.1| conserved hypothetical protein [Enterococcus faecium DO]
Length = 73
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 54/70 (77%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+L+N T+SH L+ NQL+NTDA+LV+VY+AGNT +++T+AP+H E+L+ N R I+ E
Sbjct: 4 MKLVNVTNSHSRLVLNQLENTDAHLVKVYTAGNTTIVYTEAPEHNEILLINDKRKIQPKE 63
Query: 61 LDIIREFFLK 70
++ + FL+
Sbjct: 64 IEDAIKLFLR 73
>ref|NP_814456.1| hypothetical protein EF0705 [Enterococcus faecalis V583]
gb|AAO80526.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 104
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+L+N T+S+ +L+ QL+NTDAY V+VYSAGNT ++++A H E+LI NK R I+ E
Sbjct: 1 MKLVNVTNSYKQLVNKQLENTDAYFVKVYSAGNTTAVYSEAAHHVEVLIMNKNRRIRPTE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
+ I LKR + + P + + N++ E+S V
Sbjct: 61 VKEILAKLLKR-LPKEAYDPDEISIIELNHVTEVSVPLKV 99
>ref|YP_806977.1| hypothetical protein LSEI_1763 [Lactobacillus casei ATCC 334]
gb|ABJ70535.1| hypothetical protein LSEI_1763 [Lactobacillus casei ATCC 334]
Length = 97
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLIN T+S L+ QL TDA LV+V+S G T V++T+AP H ELL +N+ R I+ E
Sbjct: 1 MRLINVTNSFRNLVSQQLSGTDARLVKVFSLGQTTVVYTEAPSHIELLFTNERRNIQRAE 60
Query: 61 LDIIREFFLKRKI 73
+ E L++ I
Sbjct: 61 IAFTLERLLQKDI 73
>ref|ZP_02184999.1| hypothetical protein CAT7_08315 [Carnobacterium sp. AT7]
gb|EDP68248.1| hypothetical protein CAT7_08315 [Carnobacterium sp. AT7]
Length = 93
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M+LI+ T++H EL+ QL NTDA V+V+S G T VI++ A H ++L+ NK R IK E
Sbjct: 1 MKLIDVTNNHSELVMEQLGNTDANFVKVFSLGPTTVIYSGAATHKDVLLLNKVRNIKNAE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISF 96
+ E L+ +D LH +++E+S
Sbjct: 61 ISFAIENILETTLD-------NVDILHAPHIVELSI 89
>ref|YP_618665.1| hypothetical protein Ldb0573 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
ref|YP_812586.1| hypothetical protein LBUL_0509 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
emb|CAI97403.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gb|ABJ58148.1| hypothetical protein LBUL_0509 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 92
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M LI+ T+S+ EL+ +QL T V+VYS GNT V++T++P +++ N +R I+E+E
Sbjct: 1 MHLIDVTNSYAELVHSQLNTTSVNYVKVYSLGNTTVVYTESPIAIGIVLENHHRKIREEE 60
Query: 61 LDIIREFFLKRKI 73
L EF +KR I
Sbjct: 61 L----EFVIKRLI 69
>ref|YP_396075.1| hypothetical protein LSA1466 [Lactobacillus sakei subsp. sakei
23K]
emb|CAI55768.1| Hypothetical protein [Lactobacillus sakei subsp. sakei 23K]
Length = 98
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
MRLIN T+S+ L+ QL T A V VYS G T V+FT++ K E+L+ N R I++ E
Sbjct: 1 MRLINITNSYHRLVTQQLATTKADYVSVYSLGKTTVLFTRSSKTREILLKNDKRHIQQAE 60
Query: 61 LDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQT 98
+D F LK +D I + L+ +L+EI+ T
Sbjct: 61 ID----FVLKELVD--IDSTDDVEILNDGSLVEITIPT 92
>ref|YP_001577120.1| hypothetical protein lhv_0682 [Lactobacillus helveticus DPC 4571]
gb|ABX26829.1| hypothetical protein lhv_0682 [Lactobacillus helveticus DPC 4571]
Length = 93
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M LI+ T+++ L+ +QL TDA V+VYS GNT VI+T++ + + N R I+EDE
Sbjct: 1 MHLIDVTNNYSNLVHSQLNTTDANYVKVYSLGNTSVIYTESKNAIGIALENHDRRIREDE 60
Query: 61 LDIIREFFLKRKI 73
+ EF +KR I
Sbjct: 61 I----EFVIKRLI 69
>ref|YP_815164.1| hypothetical protein LGAS_1364 [Lactobacillus gasseri ATCC 33323]
gb|ABJ60726.1| hypothetical protein LGAS_1364 [Lactobacillus gasseri ATCC 33323]
Length = 93
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M LI+ T+S+ +L++ QL T++ V+VYS GNT V++++ E+++ N R I++DE
Sbjct: 2 MHLIDVTNSYRDLVQRQLAATNSQFVKVYSLGNTTVVYSETADKIEIVMENHKRPIRQDE 61
Query: 61 LDIIREFFLKRKI 73
+ EF +KR I
Sbjct: 62 V----EFVIKRLI 70
>ref|NP_964669.1| hypothetical protein LJ0814 [Lactobacillus johnsonii NCC 533]
gb|AAS08635.1| hypothetical protein LJ_0814 [Lactobacillus johnsonii NCC 533]
Length = 123
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M LI+ T+S+ +L++ QL T++ V+VYS GNT V++++ E+++ N R I++DE
Sbjct: 32 MHLIDVTNSYRDLVQRQLAATNSQFVKVYSLGNTTVVYSETADKIEIVMENHKRPIRQDE 91
Query: 61 LDIIREFFLKRKI 73
+ EF +KR I
Sbjct: 92 V----EFVIKRLI 100
>ref|YP_193547.1| hypothetical protein LBA0637 [Lactobacillus acidophilus NCFM]
gb|AAV42516.1| hypothetical protein LBA0637 [Lactobacillus acidophilus NCFM]
Length = 93
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M LI+ T+++ +L+++QL TD V+VYS GNT VI+T++ + + N R ++EDE
Sbjct: 1 MHLIDVTNNYSDLVQSQLNTTDTNYVKVYSLGNTSVIYTESKNAIGIALENHDRRVREDE 60
Query: 61 LDIIREFFLK 70
+ I + LK
Sbjct: 61 IVFIIKRLLK 70
>ref|YP_535278.1| hypothetical protein LSL_0385 [Lactobacillus salivarius UCC118]
gb|ABD99195.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118]
Length = 91
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%)
Query: 1 MRLINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYRAIKEDE 60
M L++ T+SH + I+ +L T + ++VY+ GN+ V++ + E++ISNK R I + E
Sbjct: 1 MHLVDVTASHAKDIQRELAATPVHFIKVYTLGNSRVVYKKKHGFSEIVISNKLRGITDKE 60
Query: 61 LDIIREFFLK 70
++ + E LK
Sbjct: 61 INFVVEKLLK 70
>ref|ZP_00786737.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gb|EAO74524.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
Length = 42
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 60 ELDIIREFFLKRKIDPKIVIPGQSKTLHTNNLIEISFQTSV 100
E+ IREFFLKRKID I+I Q K+LHT LIEIS+ T+
Sbjct: 2 EIRTIREFFLKRKIDQSIIIQEQMKSLHTAKLIEISYPTTA 42
>pir||T34105 hypothetical protein C17G10.8 - Caenorhabditis elegans
Length = 938
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 3 LINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYR 54
L + T+ +I LKN + L + ++G DV FT AP+H+ L + K R
Sbjct: 853 LKDPTTKSERIITLDLKNGEGALTDKKASGKADVKFTLAPEHFAPLFTGKLR 904
>ref|NP_001021972.1| DeHydrogenases, Short chain family member (dhs-6) [Caenorhabditis
elegans]
gb|AAK68187.1|U28739_10 Dehydrogenases, short chain protein 6 [Caenorhabditis elegans]
Length = 418
Score = 35.4 bits (80), Expect = 1.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 3 LINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYR 54
L + T+ +I LKN + L + ++G DV FT AP+H+ L + K R
Sbjct: 333 LKDPTTKSERIITLDLKNGEGALTDKKASGKADVKFTLAPEHFAPLFTGKLR 384
>ref|XP_001680766.1| Hypothetical protein CBG06955 [Caenorhabditis briggsae AF16]
emb|CAP27381.1| C. briggsae CBR-DHS-6 protein [Caenorhabditis briggsae]
Length = 418
Score = 32.7 bits (73), Expect = 7.0, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 3 LINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYR 54
L + + I LKN D +++ S DV FT AP+H+ L S K R
Sbjct: 333 LKDPVTKSERFITLDLKNGDGEIIDNQSCHKPDVKFTLAPEHFAPLFSGKLR 384
>ref|XP_001680765.1| Hypothetical protein CBG06958 [Caenorhabditis briggsae AF16]
emb|CAP27380.1| Hypothetical protein CBG06958 [Caenorhabditis briggsae]
Length = 390
Score = 32.7 bits (73), Expect = 7.2, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 3 LINTTSSHPELIKNQLKNTDAYLVEVYSAGNTDVIFTQAPKHYELLISNKYR 54
L + + I LKN D +++ S DV FT AP+H+ L S K R
Sbjct: 305 LKDPVTKSERFITLDLKNGDGEIIDNQSCHKPDVKFTLAPEHFAPLFSGKLR 356
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 10, 2008 4:54 AM
Number of letters in database: 2,222,278,849
Number of sequences in database: 6,515,104
Lambda K H
0.317 0.134 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6515104
Number of Hits to DB: 414,585,060
Number of extensions: 14997331
Number of successful extensions: 36368
Number of sequences better than 10.0: 32
Number of HSP's gapped: 36879
Number of HSP's successfully gapped: 32
Length of query: 100
Length of database: 2,222,278,849
Length adjustment: 69
Effective length of query: 31
Effective length of database: 1,772,736,673
Effective search space: 54954836863
Effective search space used: 54954836863
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)