R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 24 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|11131469|sp|O82709|CALX_PEA CALNEXIN HOMOLOG PRECURSOR
>gi|3702620|emb|CAA76741.1| (Y17329) calnexin [Pisum sativum]
Length = 551
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _______ __
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 551
0 150 300 450
Plus Strand HSPs:
Score = 195 (68.6 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 39/63 (61%), Positives = 42/63 (66%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLPPPXXGWK 181
D+GLLVSE ARKYAI +LD PV LKD TVVL L +CGGAYI YL GWK
Sbjct: 75 DFGLLVSEPARKYAIVKELDAPVSLKDGTVVLQFETRLQNGLECGGAYIKYLQTQESGWK 134
Query: 182 PKG 190
PKG
Sbjct: 135 PKG 137
Score = 116 (40.8 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 37/81 (45%), Positives = 44/81 (54%), Frame = +3
Query: 183 PREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLT-----PSXVSSXCPLLKN 347
P+ FDNES SI+FGP + GATNK HF F NP K G + P V S L +
Sbjct: 135 PKGFDNESGYSIMFGPDRCGATNKVHFIFRHKNP-KTGKHVEHHLKFPPSVPSD--KLSH 191
Query: 348 *LXFLLXFXXPXNELPILIDGGGXKK 425
+L NE+ ILIDG KK
Sbjct: 192 VYTAVLK---DDNEVSILIDGEEKKK 214
Score = 58 (20.4 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 12/26 (46%), Positives = 15/26 (57%), Frame = +1
Query: 283 PXNGEFV*HXXXFPPSVPS*KTNSXF 360
P G+ V H FPPSVPS K + +
Sbjct: 168 PKTGKHVEHHLKFPPSVPSDKLSHVY 193
Score = 39 (13.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/14 (50%), Positives = 11/14 (78%), Frame = +2
Query: 335 PPEKLTPVFTAIXK 376
P +KL+ V+TA+ K
Sbjct: 185 PSDKLSHVYTAVLK 198
>gi|11131762|sp|Q38798|CAX2_ARATH CALNEXIN HOMOLOG 2 PRECURSOR
>gi|473878|gb|AAA17742.1| (U08315) calnexin homolog [Arabidopsis
thaliana]
Length = 528
Frame 3 hits (HSPs): _________
Frame 2 hits (HSPs): _______ __
Frame 1 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | 528
0 150 300 450
Plus Strand HSPs:
Score = 158 (55.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 32/65 (49%), Positives = 40/65 (61%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDX--PVXLKDXTVVLPLRXXLXMASKCGGAYIXYLPPPXXG 175
DYGLLVSE+A+KY I +LD P+ L + TVVL +CGGAY+ YL P G
Sbjct: 65 DYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAG 124
Query: 176 WKPKG 190
W P+G
Sbjct: 125 WVPQG 129
Score = 117 (41.2 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 31/81 (38%), Positives = 37/81 (45%), Frame = +3
Query: 183 PREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSXVSSXCPLLKN*LXFL 362
P+ FDN+SP SI+FGP K GATNK HF NP P K +
Sbjct: 127 PQGFDNDSPYSIMFGPDKCGATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDKLSHVYT 186
Query: 363 LXFXXPXNELPILIDGGGXKK 425
NE+ IL+DG KK
Sbjct: 187 AVLKSD-NEVRILVDGEEKKK 206
Score = 64 (22.5 bits), Expect = 5.2e-16, Sum P(3) = 5.2e-16
Identities = 12/18 (66%), Positives = 13/18 (72%), Frame = +1
Query: 283 PXNGEFV*HXXXFPPSVP 336
P +GEFV H FPPSVP
Sbjct: 160 PKSGEFVEHHLKFPPSVP 177
Score = 36 (12.7 bits), Expect = 5.2e-16, Sum P(3) = 5.2e-16
Identities = 7/14 (50%), Positives = 11/14 (78%), Frame = +2
Query: 335 PPEKLTPVFTAIXK 376
P +KL+ V+TA+ K
Sbjct: 177 PFDKLSHVYTAVLK 190
>gi|11276997|pir||T49873 calnexin homolog - Arabidopsis thaliana
>gi|7576172|emb|CAB87923.1| (AL163912) calnexin homolog
[Arabidopsis thaliana]
Length = 532
Frame 3 hits (HSPs): _________
Frame 2 hits (HSPs): _______
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 532
0 150 300 450
Plus Strand HSPs:
Score = 158 (55.6 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/65 (49%), Positives = 40/65 (61%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDX--PVXLKDXTVVLPLRXXLXMASKCGGAYIXYLPPPXXG 175
DYGLLVSE+A+KY I +LD P+ L + TVVL +CGGAY+ YL P G
Sbjct: 65 DYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAG 124
Query: 176 WKPKG 190
W P+G
Sbjct: 125 WVPQG 129
Score = 116 (40.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/81 (39%), Positives = 40/81 (49%), Frame = +3
Query: 183 PREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSXVSSXCP--LLKN*LX 356
P+ FDN+SP SI+FGP K GATNK HF NP P +L +
Sbjct: 127 PQGFDNDSPYSIMFGPDKCGATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYT 186
Query: 357 FLLXFXXPXNELPILIDGGGXKK 425
+L NE+ IL+DG KK
Sbjct: 187 AVLK---SDNEVRILVDGEEKKK 206
Score = 64 (22.5 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 12/18 (66%), Positives = 13/18 (72%), Frame = +1
Query: 283 PXNGEFV*HXXXFPPSVP 336
P +GEFV H FPPSVP
Sbjct: 160 PKSGEFVEHHLKFPPSVP 177
>gi|3334138|sp|Q39817|CALX_SOYBN CALNEXIN HOMOLOG PRECURSOR
>gi|7441504|pir||T06415 calnexin - soybean
>gi|669003|gb|AAA80588.1| (U20502) calnexin [Glycine max]
Length = 546
Frame 3 hits (HSPs): __________
Frame 2 hits (HSPs): _______ __
Frame 1 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 546
0 150 300 450
__________________
Annotated Domains:
BLOCKS BL00803A: Calreticulin family proteins. 50..63
BLOCKS BL00803B: Calreticulin family proteins. 74..92
BLOCKS BL00803C: Calreticulin family proteins. 103..125
BLOCKS BL00803D: Calreticulin family proteins. 143..153
BLOCKS BL00803E: Calreticulin family proteins. 186..216
BLOCKS BL00803F: Calreticulin family proteins. 232..262
BLOCKS BL00803G: Calreticulin family proteins. 322..366
BLOCKS BL00803H: Calreticulin family proteins. 372..388
Entrez Domain: LUMENAL (POTENTIAL). 26..475
Entrez Transmembrane region: POTENTIAL. 476..496
Entrez Domain: CYTOPLASMIC (POTENTIAL). 497..546
Entrez Domain: 4 X APPROXIMATE REPEATS. 234..300
Entrez Repetitive region: 1-1. 234..245
Entrez Repetitive region: 1-2. 251..262
Entrez Repetitive region: 1-3. 270..281
Entrez Repetitive region: 1-4. 289..300
Entrez Domain: 4 X APPROXIMATE REPEATS. 304..361
Entrez Repetitive region: 2-1. 304..314
Entrez Repetitive region: 2-2. 323..333
Entrez Repetitive region: 2-3. 337..347
Entrez Repetitive region: 2-4. 351..361
Entrez glycosylation site: POTENTIAL. 473
PFAM calreticulin: Calreticulin family 38..395
PRINTS CALRETICULIN1: Calreticulin motif I - 2 112..130
PRINTS CALRETICULIN2: Calreticulin motif II - 2 141..157
PRINTS CALRETICULIN3: Calreticulin motif III - 239..252
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 287..309
PRINTS CALRETICULIN5: Calreticulin motif V - 2 344..363
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 376..396
PRODOM PD134702: CALX(1) O82709(1) 1..38
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 40..394
PRODOM PD014217: CALX(2) Q38798(1) O82709(1) 396..516
PROSITE CALRETICULIN_REPEAT: Calreticulin family 232..244
PROSITE CALRETICULIN_REPEAT: Calreticulin family 249..261
PROSITE CALRETICULIN_REPEAT: Calreticulin family 287..299
PROSITE CALRETICULIN_1: Calreticulin family sign 110..125
PROSITE CALRETICULIN_2: Calreticulin family sign 145..153
__________________
Plus Strand HSPs:
Score = 189 (66.5 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 39/62 (62%), Positives = 41/62 (66%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLPPPXXGWK 181
DYGLLVSEQARKYAI +L V LKD TVVL L +CGGAYI YL P GWK
Sbjct: 74 DYGLLVSEQARKYAIVKELAESVSLKDGTVVLQFETRLQNGLECGGAYIKYLRPQESGWK 133
Query: 182 PK 187
PK
Sbjct: 134 PK 135
Score = 149 (52.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/96 (40%), Positives = 41/96 (42%), Frame = +3
Query: 138 GHIXNIFHPPXXDGNPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSX 317
G P P+EFDNESP SI+FGP K GATNK HF F NP
Sbjct: 119 GAYIKYLRPQESGWKPKEFDNESPYSIMFGPDKCGATNKVHFIFKHKNPKSGEYVEHHLK 178
Query: 318 VSSXCPLLKN*LXFLLXFXXPXNELPILIDGGGXKK 425
P K P NEL ILIDG KK
Sbjct: 179 YPPSVPSDKL-THVYTAILKPDNELQILIDGEEKKK 213
Score = 64 (22.5 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 18/48 (37%), Positives = 23/48 (47%), Frame = +1
Query: 283 PXNGEFV*HXXXFPPSVPS*KTNSXFYCXS*XPXMNCPF*LMVEEXKK 426
P +GE+V H +PPSVPS K + Y P + EE KK
Sbjct: 167 PKSGEYVEHHLKYPPSVPSDKL-THVYTAILKPDNELQILIDGEEKKK 213
Score = 44 (15.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 9/14 (64%), Positives = 11/14 (78%), Frame = +2
Query: 335 PPEKLTPVFTAIXK 376
P +KLT V+TAI K
Sbjct: 184 PSDKLTHVYTAILK 197
>gi|11131766|sp|Q39994|CALX_HELTU CALNEXIN HOMOLOG PRECURSOR
>gi|7441505|pir||T10892 probable calnexin - Jerusalem artichoke
>gi|510907|emb|CAA84491.1| (Z35108) calnexin [Helianthus tuberosus]
Length = 540
Frame 3 hits (HSPs): __________
Frame 2 hits (HSPs): _______ __
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 540
0 150 300 450
Plus Strand HSPs:
Score = 180 (63.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 35/63 (55%), Positives = 42/63 (66%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLPPPXXGWK 181
DYGLLVS++ARKYAI +L+ PV LKD T+VL L +CGGAY+ YL P GW
Sbjct: 69 DYGLLVSDKARKYAIVKELEKPVELKDGTIVLQYEVRLQNGLECGGAYLKYLRPQDAGWT 128
Query: 182 PKG 190
KG
Sbjct: 129 AKG 131
Score = 127 (44.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 36/96 (37%), Positives = 38/96 (39%), Frame = +3
Query: 138 GHIXNIFHPPXXDGNPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSX 317
G P + FDNESP SI+FGP K GATNK HF NP
Sbjct: 114 GAYLKYLRPQDAGWTAKGFDNESPYSIMFGPDKCGATNKVHFILKHKNPKSGDYVEHHLK 173
Query: 318 VSSXCPLLKN*LXFLLXFXXPXNELPILIDGGGXKK 425
P K P NEL ILIDG KK
Sbjct: 174 FPPSVPSDKL-THVYTAVIKPDNELVILIDGEEKKK 208
Score = 63 (22.2 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 12/21 (57%), Positives = 15/21 (71%), Frame = +1
Query: 283 PXNGEFV*HXXXFPPSVPS*K 345
P +G++V H FPPSVPS K
Sbjct: 162 PKSGDYVEHHLKFPPSVPSDK 182
Score = 43 (15.1 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 8/14 (57%), Positives = 11/14 (78%), Frame = +2
Query: 335 PPEKLTPVFTAIXK 376
P +KLT V+TA+ K
Sbjct: 179 PSDKLTHVYTAVIK 192
>gi|231683|sp|P29402|CAX1_ARATH CALNEXIN HOMOLOG 1 PRECURSOR
>gi|421825|pir||JN0597 calnexin-like protein - Arabidopsis thaliana
>gi|16211|emb|CAA79144.1| (Z18242) calnexin homolog [Arabidopsis
thaliana] >gi|10176872|dbj|BAB10079.1| (AB010069) calnexin homolog
precursor [Arabidopsis thaliana]
Length = 530
Frame 3 hits (HSPs): __________
Frame 2 hits (HSPs): ______ __
Frame 1 hits (HSPs): ______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 530
0 150 300 450
__________________
Annotated Domains:
BLOCKS BL00803A: Calreticulin family proteins. 41..54
BLOCKS BL00803B: Calreticulin family proteins. 65..83
BLOCKS BL00803C: Calreticulin family proteins. 94..116
BLOCKS BL00803D: Calreticulin family proteins. 134..144
BLOCKS BL00803E: Calreticulin family proteins. 177..207
BLOCKS BL00803F: Calreticulin family proteins. 223..253
BLOCKS BL00803G: Calreticulin family proteins. 313..357
BLOCKS BL00803H: Calreticulin family proteins. 363..379
DOMO DM01012: CALRETICULINFAMILY 17..217
DOMO DM00520: CALRETICULINFAMILY 219..251
DOMO DM00520: CALRETICULINFAMILY 253..297
DOMO DM00950: CALRETICULINFAMILY 299..453
Entrez Domain: LUMENAL (POTENTIAL). 19..466
Entrez Transmembrane region: POTENTIAL. 467..487
Entrez Domain: CYTOPLASMIC (POTENTIAL). 488..530
Entrez Domain: 4 X APPROXIMATE REPEATS. 225..291
Entrez Repetitive region: 1-1. 225..236
Entrez Repetitive region: 1-2. 242..253
Entrez Repetitive region: 1-3. 261..272
Entrez Repetitive region: 1-4. 280..291
Entrez Domain: 4 X APPROXIMATE REPEATS. 295..352
Entrez Repetitive region: 2-1. 295..305
Entrez Repetitive region: 2-2. 314..324
Entrez Repetitive region: 2-3. 328..338
Entrez Repetitive region: 2-4. 342..352
Entrez glycosylation site: POTENTIAL. 464
PFAM calreticulin: Calreticulin family 29..386
PRINTS CALRETICULIN1: Calreticulin motif I - 2 103..121
PRINTS CALRETICULIN2: Calreticulin motif II - 2 132..148
PRINTS CALRETICULIN3: Calreticulin motif III - 230..243
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 278..300
PRINTS CALRETICULIN5: Calreticulin motif V - 2 335..354
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 367..387
PRODOM PD134697: CALX_ARATH 1..30
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 32..385
PRODOM PD014217: CALX(2) Q38798(1) O82709(1) 387..509
PROSITE CALRETICULIN_REPEAT: Calreticulin family 223..235
PROSITE CALRETICULIN_REPEAT: Calreticulin family 240..252
PROSITE CALRETICULIN_REPEAT: Calreticulin family 278..290
PROSITE CALRETICULIN_1: Calreticulin family sign 101..116
PROSITE CALRETICULIN_2: Calreticulin family sign 136..144
__________________
Plus Strand HSPs:
Score = 177 (62.3 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 34/63 (53%), Positives = 41/63 (65%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLPPPXXGWK 181
DYGLLVSE+ARKY I +LD P+ LK+ TVVL +CGGAY+ YL P GW
Sbjct: 65 DYGLLVSEKARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWT 124
Query: 182 PKG 190
P+G
Sbjct: 125 PQG 127
Score = 122 (42.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 34/96 (35%), Positives = 40/96 (41%), Frame = +3
Query: 138 GHIXNIFHPPXXDGNPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSX 317
G P P+ FD+ESP SI+FGP K G TNK HF NP
Sbjct: 110 GAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCGGTNKVHFILKHKNPKSGEYVEHHLK 169
Query: 318 VSSXCPLLKN*LXFLLX-FXXPXNELPILIDGGGXKK 425
P K L + P NE+ IL+DG KK
Sbjct: 170 FPPSVPYDK--LSHVYTAILKPDNEVRILVDGEEKKK 204
Score = 62 (21.8 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 19/48 (39%), Positives = 22/48 (45%), Frame = +1
Query: 283 PXNGEFV*HXXXFPPSVPS*KTNSXFYCXS*XPXMNCPF*LMVEEXKK 426
P +GE+V H FPPSVP K S Y P + EE KK
Sbjct: 158 PKSGEYVEHHLKFPPSVPYDKL-SHVYTAILKPDNEVRILVDGEEKKK 204
Score = 38 (13.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 8/14 (57%), Positives = 11/14 (78%), Frame = +2
Query: 335 PPEKLTPVFTAIXK 376
P +KL+ V+TAI K
Sbjct: 175 PYDKLSHVYTAILK 188
>gi|10945144|emb|CAC14219.1| (AJ277589) calnexin [Yarrowia lipolytica]
Length = 582
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | 582
0 150 300 450
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 28/83 (33%), Positives = 33/83 (39%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSXVSSXCPLLKN*L 353
D EF +E+P I+FGP K G+TNK HF P G VS L
Sbjct: 148 DKGVEEFSSETPYQIMFGPDKCGSTNKVHFIVK--RPLPDGTYEEKHLVSPAHARLNKLT 205
Query: 354 XFLLXFXXPXNELPILIDGGGXK 422
P NE I I+G K
Sbjct: 206 NLYTLVIRPKNEFEIRINGNVVK 228
Score = 89 (31.3 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 19/52 (36%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL+V A +AI D P+ K T+V+ L +CGGAY+ L
Sbjct: 89 DKGLVVKSPAAHHAITTAFDTPINNKGKTLVVQYEVKLQKGLECGGAYVKLL 140
>gi|8217415|emb|CAB92410.1| (AJ011990) calreticulin-like protein
[Tritrichomonas suis]
Length = 559
Frame 3 hits (HSPs): ________
Frame 2 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | 559
0 150 300 450
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/81 (34%), Positives = 36/81 (44%), Frame = +3
Query: 183 PREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSXVSSXCPLLKN*LXFL 362
P NE+ I+FGP K G+TNK HF F NP K G + + + + L L
Sbjct: 131 PDSLCNETRYVIMFGPDKCGSTNKVHFIFRYKNP-KTGE-VEEKHMQEAPGIKTDKLTHL 188
Query: 363 LXFXX-PXNELPILIDGGGXKK 425
P N ILID K+
Sbjct: 189 YTLIVRPDNSFEILIDAESVKQ 210
Score = 82 (28.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/37 (45%), Positives = 20/37 (54%), Frame = +2
Query: 38 YAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYI 148
Y + K D P+ L D T+VL L A CGGAYI
Sbjct: 84 YGLSTKFDQPLVLTDKTLVLQYELRLQDALNCGGAYI 120
>gi|7441503|pir||T03251 calnexin - maize (fragment) >gi|1181331|emb|CAA54678.1|
(X77569) calnexin [Zea mays]
Length = 428
Frame 3 hits (HSPs): ___________
Frame 2 hits (HSPs): __
__________________________________________________
Database sequence: | | | | 428
0 150 300
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 35/88 (39%), Positives = 44/88 (50%), Frame = +3
Query: 162 PPXXDGNPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSX-VSSXCPL 338
P + +EFDNE+P +I+FGP K G+TNK HF NP K G + P
Sbjct: 7 PQDAGWDAKEFDNETPYTIMFGPDKCGSTNKVHFILKHKNP-KTGKYVEHHLKFPPSVPY 65
Query: 339 LKN*LXFLLX-FXXPXNELPILIDGGGXKK 425
K L + P NE+ ILIDG KK
Sbjct: 66 DK--LSHVYTAILKPDNEVRILIDGEEKKK 93
Score = 42 (14.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 7/15 (46%), Positives = 8/15 (53%), Frame = +2
Query: 143 YIXYLPPPXXGWKPK 187
YI Y+ P GW K
Sbjct: 1 YIKYIRPQDAGWDAK 15
>gi|422335|pir||A46637 calnexin homolog SmIrV1 - fluke (Schistosoma mansoni)
>gi|348677|gb|AAA02575.1| (L08641) SmIrV1 protein [Schistosoma
mansoni]
Length = 582
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): _____
Annotated Domains: ________________________________________
__________________________________________________
Database sequence: | | | | | 582
0 150 300 450
__________________
Annotated Domains:
DOMO DM01012: CALRETICULINFAMILY 29..248
DOMO DM00520: CALRETICULINFAMILY 250..282
DOMO DM00520: CALRETICULINFAMILY 284..328
DOMO DM00950: CALRETICULINFAMILY 330..483
PROSITE CALRETICULIN_REPEAT: Calreticulin family 271..283
PROSITE CALRETICULIN_1: Calreticulin family sign 131..146
PROSITE CALRETICULIN_2: Calreticulin family sign 165..173
__________________
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 15/33 (45%), Positives = 23/33 (69%), Frame = +3
Query: 186 REFDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
++F++++P +I+FGP K G NK HF F NP
Sbjct: 155 KQFNDKTPYTIMFGPDKCGLENKFHFIFRHKNP 187
Score = 76 (26.8 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 16/52 (30%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
DY L++ +A+ +A+ KL P+ +V+ CGGAYI L
Sbjct: 95 DYALVLKSKAKHHAVSTKLFRPIKFDTNELVIQYDVKFQDGIDCGGAYIKLL 146
>gi|3510498|gb|AAC33833.1| (AF025955) calcium-binding protein Sj66 precursor
[Schistosoma japonicum]
Length = 582
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | 582
0 150 300 450
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 15/33 (45%), Positives = 23/33 (69%), Frame = +3
Query: 186 REFDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
++F++++P +I+FGP K G NK HF F NP
Sbjct: 155 KQFNDKTPYTIMFGPDKCGLENKFHFIFRYKNP 187
Score = 76 (26.8 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 15/52 (28%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
DY L++ +A+ +A+ +L P+ +V+ CGGAYI L
Sbjct: 95 DYALVLKSKAKHHAVSTRLSRPIKFDTDELVIQYDVKFQDGIDCGGAYIKLL 146
>gi|3687623|gb|AAC62193.1| (AF030342) calcium-binding protein Sj66 [Schistosoma
japonicum]
Length = 582
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | 582
0 150 300 450
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 15/33 (45%), Positives = 23/33 (69%), Frame = +3
Query: 186 REFDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
++F++++P +I+FGP K G NK HF F NP
Sbjct: 155 KQFNDKTPYTIMFGPDKCGLENKFHFIFRYKNP 187
Score = 76 (26.8 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 15/52 (28%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
DY L++ +A+ +A+ +L P+ +V+ CGGAYI L
Sbjct: 95 DYALVLKSKAKHHAVSTRLSRPIKFDTDELVIQYDVKFQDGIDCGGAYIKLL 146
>gi|1345835|sp|Q06814|CRTC_SCHMA CALRETICULIN PRECURSOR (SM4 PROTEIN)
>gi|552239|gb|AAA29854.1| (M93097) antigen [Schistosoma mansoni]
Length = 393
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | 393
0 150 300
__________________
Annotated Domains:
BLOCKS BL00803A: Calreticulin family proteins. 31..44
BLOCKS BL00803B: Calreticulin family proteins. 60..78
BLOCKS BL00803C: Calreticulin family proteins. 89..111
BLOCKS BL00803D: Calreticulin family proteins. 126..136
BLOCKS BL00803E: Calreticulin family proteins. 164..194
BLOCKS BL00803F: Calreticulin family proteins. 223..253
BLOCKS BL00803G: Calreticulin family proteins. 256..300
BLOCKS BL00803H: Calreticulin family proteins. 307..323
DOMO DM01012: CALRETICULINFAMILY 1..206
DOMO DM00520: CALRETICULINFAMILY 218..251
DOMO DM00950: CALRETICULINFAMILY 253..388
Entrez Domain: 4 X 12 AA APPROXIMATE REPEATS. 189..254
Entrez Repetitive region: 1-1. 189..200
Entrez Repetitive region: 1-2. 209..220
Entrez Repetitive region: 1-3. 225..236
Entrez Repetitive region: 1-4. 243..254
Entrez Domain: 3 X 11 AA APPROXIMATE REPEATS. 257..295
Entrez Repetitive region: 2-1. 257..267
Entrez Repetitive region: 2-2. 271..281
Entrez Repetitive region: 2-3. 285..295
Entrez glycosylation site: POTENTIAL. 27
Entrez other site: PREVENT SECRETION FROM ER. 390..393
PFAM calreticulin: Calreticulin family 19..330
PRINTS CALRETICULIN1: Calreticulin motif I - 2 98..116
PRINTS CALRETICULIN2: Calreticulin motif II - 2 124..140
PRINTS CALRETICULIN3: Calreticulin motif III - 213..226
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 240..262
PRINTS CALRETICULIN5: Calreticulin motif V - 2 278..297
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 311..331
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 19..329
PRODOM PD134700: CRTC(1) O45034(1) 331..392
PROSITE CALRETICULIN_REPEAT: Calreticulin family 240..252
PROSITE CALRETICULIN_1: Calreticulin family sign 96..111
PROSITE CALRETICULIN_2: Calreticulin family sign 128..136
__________________
Plus Strand HSPs:
Score = 85 (29.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 19/52 (36%), Positives = 24/52 (46%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL ++ AR Y I K+ P + T+VL CGGAYI L
Sbjct: 60 DLGLKTTQDARFYGIARKISEPFSNRGKTMVLQFTVKFDKTVSCGGAYIKLL 111
Score = 74 (26.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/33 (48%), Positives = 20/33 (60%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXHFXF 269
D +P++F ESP I+FGP G AT K H F
Sbjct: 114 DIDPKKFHGESPYKIMFGPDICGMATKKVHVIF 146
>gi|349800|gb|AAA29917.1| (M80524) calreticulin [Schistosoma japonicum]
Length = 350
Frame 3 hits (HSPs): ______
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 350
0 150 300
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 20/52 (38%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL ++ AR Y I K+ P +D T+VL CGGAYI L
Sbjct: 15 DLGLKTTQDARFYGIARKISEPFSNRDKTLVLQFTVKFDKTVTCGGAYIKLL 66
Score = 66 (23.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 14/33 (42%), Positives = 19/33 (57%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXHFXF 269
D +P+ F E+P I+FGP G AT + H F
Sbjct: 69 DIDPKTFHGETPYKIMFGPDICGMATKRIHVIF 101
>gi|499349|gb|AAA19024.1| (L24159) calreticulin [Schistosoma mansoni]
Length = 373
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 373
0 150 300
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 18/52 (34%), Positives = 24/52 (46%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL ++ AR Y I K+ P + T++L CGGAYI L
Sbjct: 60 DLGLKTTQDARFYGIARKISEPFSNRGKTILLQFTVKFDKTVSCGGAYIKLL 111
Score = 74 (26.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/33 (48%), Positives = 20/33 (60%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXHFXF 269
D +P++F ESP I+FGP G AT K H F
Sbjct: 114 DIDPKKFHGESPYKIMFGPDICGMATKKVHVIF 146
>gi|1098303|prf||2115372A 55kD antigen [Schistosoma japonicum]
Length = 396
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 396
0 150 300
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/52 (38%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL ++ AR Y I K+ P +D T+VL CGGAYI L
Sbjct: 61 DLGLKTTQDARFYGIARKISEPFSNRDKTLVLQFTVKFDKTVTCGGAYIKLL 112
Score = 66 (23.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 14/33 (42%), Positives = 19/33 (57%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXHFXF 269
D +P+ F E+P I+FGP G AT + H F
Sbjct: 115 DIDPKTFHGETPYKIMFGPDICGMATKRIHVIF 147
>gi|2829281|gb|AAC00515.1| (AF044408) calreticulin [Schistosoma japonicum]
Length = 396
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 396
0 150 300
Plus Strand HSPs:
Score = 91 (32.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/52 (38%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL ++ AR Y I K+ P +D T+VL CGGAYI L
Sbjct: 61 DLGLKTTQDARFYGIARKISEPFSNRDKTLVLQFTVKFDKTVTCGGAYIKLL 112
Score = 66 (23.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 14/33 (42%), Positives = 19/33 (57%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXHFXF 269
D +P+ F E+P I+FGP G AT + H F
Sbjct: 115 DIDPKTFHGETPYKIMFGPDICGMATKRIHVIF 147
>gi|461686|sp|P34652|CALX_CAEEL CALNEXIN HOMOLOG PRECURSOR
>gi|482173|pir||S40938 hypothetical protein ZK632.6 -
Caenorhabditis elegans >gi|3881697|emb|CAA80183.1| (Z22181)
strongly similar to calnexin, contains similarity to Pfam domain:
PF00262 (Calreticulin family), Score=864.5, E-value=9.6e-267,
N=1~cDNA EST EMBL:M75896 comes from this gene~cDNA EST EMBL:M89345
comes from this gene~cDNA EST EMBL:T02405 comes >
Length = 619
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 619
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL00803A: Calreticulin family proteins. 73..86
BLOCKS BL00803B: Calreticulin family proteins. 109..127
BLOCKS BL00803C: Calreticulin family proteins. 138..160
BLOCKS BL00803D: Calreticulin family proteins. 177..187
BLOCKS BL00803E: Calreticulin family proteins. 224..254
BLOCKS BL00803F: Calreticulin family proteins. 268..298
BLOCKS BL00803G: Calreticulin family proteins. 358..402
BLOCKS BL00803H: Calreticulin family proteins. 409..425
DOMO DM01012: CALRETICULINFAMILY 41..262
DOMO DM00520: CALRETICULINFAMILY 264..296
DOMO DM00520: CALRETICULINFAMILY 298..342
DOMO DM00950: CALRETICULINFAMILY 344..498
Entrez glycosylation site: POTENTIAL. 203
Entrez glycosylation site: POTENTIAL. 571
PFAM calreticulin: Calreticulin family 59..432
PRINTS CALRETICULIN1: Calreticulin motif I - 2 147..165
PRINTS CALRETICULIN2: Calreticulin motif II - 2 175..191
PRINTS CALRETICULIN3: Calreticulin motif III - 275..288
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 323..345
PRINTS CALRETICULIN5: Calreticulin motif V - 2 366..385
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 413..433
PRODOM PD134709: CALX_CAEEL 1..59
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 61..431
PRODOM PD008737: CALX(5) CALG(2) Q98985(1) 454..508
PRODOM PD134718: CALX_CAEEL 510..618
PROSITE CALRETICULIN_REPEAT: Calreticulin family 285..297
PROSITE CALRETICULIN_1: Calreticulin family sign 145..160
PROSITE CALRETICULIN_2: Calreticulin family sign 179..187
__________________
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 18/52 (34%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL+V +AR +AI KL+ P T V+ +CGG Y+ L
Sbjct: 109 DLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLL 160
Score = 75 (26.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 14/31 (45%), Positives = 19/31 (61%), Frame = +3
Query: 192 FDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
F +++ +I+FGP K GAT K H F NP
Sbjct: 171 FQDKTAYTIMFGPDKCGATGKVHLIFRYKNP 201
>gi|543922|sp|P35565|CALX_RAT CALNEXIN PRECURSOR >gi|2143640|pir||C54354
calnexin precursor - rat >gi|310085|gb|AAA21015.1| (L18889)
calnexin [Rattus rattus]
Length = 591
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 591
0 150 300 450
__________________
Annotated Domains:
Entrez Domain: LUMENAL (POTENTIAL). 21..463
Entrez Transmembrane region: POTENTIAL. 483..503
Entrez Domain: CYTOPLASMIC (POTENTIAL). 504..591
Entrez Domain: 4 X APPROXIMATE REPEATS. 279..346
Entrez Repetitive region: 1-1. 279..291
Entrez Repetitive region: 1-2. 296..308
Entrez Repetitive region: 1-3. 315..327
Entrez Repetitive region: 1-4. 334..346
Entrez Domain: 4 X APPROXIMATE REPEATS. 349..406
Entrez Repetitive region: 2-1. 349..359
Entrez Repetitive region: 2-2. 368..378
Entrez Repetitive region: 2-3. 382..392
Entrez Repetitive region: 2-4. 396..406
PFAM calreticulin: Calreticulin family 70..441
PRINTS CALRETICULIN1: Calreticulin motif I - 2 156..174
PRINTS CALRETICULIN2: Calreticulin motif II - 2 184..200
PRINTS CALRETICULIN3: Calreticulin motif III - 284..297
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 332..354
PRINTS CALRETICULIN5: Calreticulin motif V - 2 375..394
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 422..442
PRODOM PD018006: CALX(4) 1..23
PRODOM PD024728: CALX(4) Q98985(1) 39..68
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 70..440
PRODOM PD008737: CALX(5) CALG(2) Q98985(1) 443..509
PRODOM PD014729: CALX(4) 551..590
PROSITE CALRETICULIN_REPEAT: Calreticulin family 277..289
PROSITE CALRETICULIN_REPEAT: Calreticulin family 294..306
PROSITE CALRETICULIN_REPEAT: Calreticulin family 332..344
PROSITE CALRETICULIN_1: Calreticulin family sign 154..169
PROSITE CALRETICULIN_2: Calreticulin family sign 188..196
__________________
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/40 (45%), Positives = 24/40 (60%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
N +F +++P +I+FGP K G K HF F NP K GV
Sbjct: 176 NLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNP-KTGV 214
Score = 75 (26.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/52 (28%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL+ P +++ +CGGAY+ L
Sbjct: 118 DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLL 169
>gi|108081|pir||A37273 calnexin precursor - dog
Length = 593
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
Annotated Domains: _____ ___ __
__________________________________________________
Database sequence: | | | | | 593
0 150 300 450
__________________
Annotated Domains:
PROSITE CALRETICULIN_REPEAT: Calreticulin family 277..289
PROSITE CALRETICULIN_REPEAT: Calreticulin family 294..306
PROSITE CALRETICULIN_REPEAT: Calreticulin family 332..344
PROSITE CALRETICULIN_1: Calreticulin family sign 154..169
PROSITE CALRETICULIN_2: Calreticulin family sign 188..196
__________________
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/40 (45%), Positives = 24/40 (60%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
N +F +++P +I+FGP K G K HF F NP K GV
Sbjct: 176 NLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNP-KTGV 214
Score = 75 (26.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/52 (28%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL+ P +++ +CGGAY+ L
Sbjct: 118 DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLL 169
>gi|108133|pir||S17366 calnexin precursor - dog
Length = 593
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
Annotated Domains: _____ ___ __
__________________________________________________
Database sequence: | | | | | 593
0 150 300 450
__________________
Annotated Domains:
PROSITE CALRETICULIN_REPEAT: Calreticulin family 277..289
PROSITE CALRETICULIN_REPEAT: Calreticulin family 294..306
PROSITE CALRETICULIN_REPEAT: Calreticulin family 332..344
PROSITE CALRETICULIN_1: Calreticulin family sign 154..169
PROSITE CALRETICULIN_2: Calreticulin family sign 188..196
__________________
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/40 (45%), Positives = 24/40 (60%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
N +F +++P +I+FGP K G K HF F NP K GV
Sbjct: 176 NLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNP-KTGV 214
Score = 75 (26.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/52 (28%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL+ P +++ +CGGAY+ L
Sbjct: 118 DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLL 169
>gi|3123183|sp|P24643|CALX_CANFA CALNEXIN PRECURSOR (PP90)
>gi|1838958|emb|CAA37678.1| (X53616) pp90 precursor [Canis
familiaris]
Length = 593
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 593
0 150 300 450
__________________
Annotated Domains:
BLOCKS BL00803A: Calreticulin family proteins. 82..95
BLOCKS BL00803B: Calreticulin family proteins. 118..136
BLOCKS BL00803C: Calreticulin family proteins. 147..169
BLOCKS BL00803D: Calreticulin family proteins. 186..196
BLOCKS BL00803E: Calreticulin family proteins. 233..263
BLOCKS BL00803F: Calreticulin family proteins. 277..307
BLOCKS BL00803G: Calreticulin family proteins. 367..411
BLOCKS BL00803H: Calreticulin family proteins. 418..434
DOMO DM01012: CALRETICULINFAMILY 54..271
DOMO DM00520: CALRETICULINFAMILY 273..305
DOMO DM00520: CALRETICULINFAMILY 307..351
DOMO DM00950: CALRETICULINFAMILY 353..501
Entrez Domain: LUMENAL (POTENTIAL). 21..482
Entrez Transmembrane region: POTENTIAL. 483..503
Entrez Domain: CYTOPLASMIC (POTENTIAL). 504..593
Entrez Domain: 4 X APPROXIMATE REPEATS. 279..345
Entrez Repetitive region: 1-1. 279..290
Entrez Repetitive region: 1-2. 296..307
Entrez Repetitive region: 1-3. 315..326
Entrez Repetitive region: 1-4. 334..345
Entrez Domain: 4 X APPROXIMATE REPEATS. 349..406
Entrez Repetitive region: 2-1. 349..359
Entrez Repetitive region: 2-2. 368..378
Entrez Repetitive region: 2-3. 382..392
Entrez Repetitive region: 2-4. 396..406
PFAM calreticulin: Calreticulin family 70..441
PRINTS CALRETICULIN1: Calreticulin motif I - 2 156..174
PRINTS CALRETICULIN2: Calreticulin motif II - 2 184..200
PRINTS CALRETICULIN3: Calreticulin motif III - 284..297
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 332..354
PRINTS CALRETICULIN5: Calreticulin motif V - 2 375..394
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 422..442
PRODOM PD018006: CALX(4) 1..23
PRODOM PD024728: CALX(4) Q98985(1) 39..68
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 70..440
PRODOM PD008737: CALX(5) CALG(2) Q98985(1) 442..512
PRODOM PD014729: CALX(4) 553..592
PROSITE CALRETICULIN_REPEAT: Calreticulin family 277..289
PROSITE CALRETICULIN_REPEAT: Calreticulin family 294..306
PROSITE CALRETICULIN_REPEAT: Calreticulin family 332..344
PROSITE CALRETICULIN_1: Calreticulin family sign 154..169
PROSITE CALRETICULIN_2: Calreticulin family sign 188..196
__________________
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/40 (45%), Positives = 24/40 (60%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
N +F +++P +I+FGP K G K HF F NP K GV
Sbjct: 176 NLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNP-KTGV 214
Score = 75 (26.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/52 (28%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL+ P +++ +CGGAY+ L
Sbjct: 118 DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLL 169
>gi|683793|gb|AAA62450.1| (L23865) calnexin [Mus musculus]
Length = 571
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | 571
0 150 300 450
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 17/37 (45%), Positives = 23/37 (62%), Frame = +3
Query: 189 EFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
+F +++P +I+FGP K G K HF F NP K GV
Sbjct: 159 QFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNP-KTGV 194
Score = 75 (26.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 15/52 (28%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL+ P +++ +CGGAY+ L
Sbjct: 98 DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLL 149
>gi|6671664 ref|NP_031623.1| calnexin [Mus musculus]
>gi|543921|sp|P35564|CALX_MOUSE CALNEXIN PRECURSOR
>gi|2137185|pir||B54354 calnexin precursor - mouse
>gi|309132|gb|AAA21014.1| (L18888) calnexin [Mus musculus]
Length = 591
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 591
0 150 300 450
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 17/37 (45%), Positives = 23/37 (62%), Frame = +3
Query: 189 EFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
+F +++P +I+FGP K G K HF F NP K GV
Sbjct: 179 QFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNP-KTGV 214
Score = 75 (26.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 15/52 (28%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL+ P +++ +CGGAY+ L
Sbjct: 118 DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLL 169
>gi|10716563 ref|NP_001737.1| calnexin [Homo sapiens]
>gi|543920|sp|P27824|CALX_HUMAN CALNEXIN PRECURSOR (MAJOR
HISTOCOMPATIBILITY COMPLEX CLASS I ANTIGEN-BINDING PROTEIN P88)
(P90) (IP90) >gi|539549|pir||A46673 calnexin precursor - human
>gi|186523|gb|AAA36125.1| (L10284) calnexin [Homo sapiens]
>gi|306481|gb|AAA21013.1| (L18887) calnexin [Homo sapiens]
>gi|6911590|emb|CAB72137.1| (AJ271880) calnexin [Homo sapiens]
Length = 592
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 592
0 150 300 450
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 17/40 (42%), Positives = 24/40 (60%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
N +F +++P +I+FGP K G K HF F NP K G+
Sbjct: 175 NLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNP-KTGI 213
Score = 75 (26.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 15/52 (28%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL+ P +++ +CGGAY+ L
Sbjct: 117 DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLL 168
>gi|7441501|pir||S71342 calnexin precursor - Korean frog
>gi|1514959|dbj|BAA11426.1| (D78590) calnexin [Rana rugosa]
Length = 622
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 622
0 150 300 450 600
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 16/35 (45%), Positives = 21/35 (60%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
N +F +++P SI+FGP K G K HF F NP
Sbjct: 191 NLDQFHDKTPYSIMFGPDKCGEDYKLHFIFRHKNP 225
Score = 74 (26.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 15/52 (28%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL P +++ +CGGAY+ L
Sbjct: 133 DKGLILLSRAKHHAIASKLKKPFIFDKKPLIVQYEVNFQSGIECGGAYVKLL 184
>gi|477298|pir||A48573 calreticulin autoantigen homolog precursor - fluke
(Schistosoma mansoni)
Length = 393
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _______
Annotated Domains: __ __ __
__________________________________________________
Database sequence: | | | | 393
0 150 300
__________________
Annotated Domains:
PROSITE CALRETICULIN_REPEAT: Calreticulin family 240..252
PROSITE CALRETICULIN_1: Calreticulin family sign 96..111
PROSITE CALRETICULIN_2: Calreticulin family sign 128..136
__________________
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 18/52 (34%), Positives = 23/52 (44%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL ++ AR Y I K+ + T+VL CGGAYI L
Sbjct: 60 DLGLKTTQDARFYGIARKISETFSNRGKTMVLQFTVKFDKTVSCGGAYIKLL 111
Score = 74 (26.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 16/33 (48%), Positives = 20/33 (60%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXHFXF 269
D +P++F ESP I+FGP G AT K H F
Sbjct: 114 DIDPKKFHGESPYKIMFGPDICGMATKKVHVIF 146
>gi|2134858|pir||I53260 calnexin - human >gi|179832|gb|AAA21749.1| (M94859)
calnexin [Homo sapiens]
Length = 592
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
Annotated Domains: _____ ___ __
__________________________________________________
Database sequence: | | | | | 592
0 150 300 450
__________________
Annotated Domains:
PROSITE CALRETICULIN_REPEAT: Calreticulin family 276..288
PROSITE CALRETICULIN_REPEAT: Calreticulin family 293..305
PROSITE CALRETICULIN_REPEAT: Calreticulin family 331..343
PROSITE CALRETICULIN_1: Calreticulin family sign 153..168
PROSITE CALRETICULIN_2: Calreticulin family sign 187..195
__________________
Plus Strand HSPs:
Score = 76 (26.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/40 (40%), Positives = 23/40 (57%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
N + +++P +I+FGP K G K HF F NP K G+
Sbjct: 175 NLDQLHDKTPYTIMFGPDKCGEDYKLHFIFRHKNP-KTGI 213
Score = 75 (26.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/52 (28%), Positives = 26/52 (50%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI KL+ P +++ +CGGAY+ L
Sbjct: 117 DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLL 168
>gi|7709904|gb|AAB29309.2| (S67659) calnexin [Homo sapiens]
Length = 272
Frame 3 hits (HSPs): ______________
Frame 2 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | | 272
0 50 100 150 200 250
Plus Strand HSPs:
Score = 80 (28.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 22/76 (28%), Positives = 31/76 (40%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGVCLTPSXVSSXCPLLKN*LXF 359
N +F +++P +I+FGP K G K F F NP K G+ L +
Sbjct: 159 NRDQFHDKTPYTIMFGPDKCGEDYKLQFIFRHKNP-KTGIYEEKHAKRPDADLKTYFMIL 217
Query: 360 LLXFXXPXNELPILID 407
P N IL+D
Sbjct: 218 YTLILNPDNSFEILVD 233
Score = 57 (20.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/49 (26%), Positives = 23/49 (46%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYI 148
D ++S Q + +AI KL+ P +++ +CGGAY+
Sbjct: 102 DKDCVMSRQ-KHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYV 149
>gi|7301776|gb|AAF56887.1| (AE003769) Cnx99A gene product [Drosophila
melanogaster]
Length = 545
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 545
0 150 300 450
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 14/33 (42%), Positives = 21/33 (63%), Frame = +3
Query: 186 REFDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
+ F++++P +I+FGP K G K HF F NP
Sbjct: 124 KAFNDKTPYTIMFGPDKCGNDVKMHFIFRHVNP 156
Score = 72 (25.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/53 (32%), Positives = 26/53 (49%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLK-DXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ AI L P K D +V+ L +CGG+Y+ L
Sbjct: 62 DLGLVLKSKAKHAAIAAPLRKPFEFKSDKPLVVQYEVTLQEGQECGGSYLKLL 114
>gi|2213427|emb|CAA67846.1| (X99488) calnexin [Drosophila melanogaster]
Length = 605
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | || 605
0 150 300 450 600
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 14/33 (42%), Positives = 21/33 (63%), Frame = +3
Query: 186 REFDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
+ F++++P +I+FGP K G K HF F NP
Sbjct: 184 KAFNDKTPYTIMFGPDKCGNDVKMHFIFRHVNP 216
Score = 72 (25.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 17/53 (32%), Positives = 26/53 (49%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLK-DXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ AI L P K D +V+ L +CGG+Y+ L
Sbjct: 122 DLGLVLKSKAKHAAIAAPLRKPFEFKSDKPLVVQYEVTLQEGQECGGSYLKLL 174
>gi|543923|sp|P36581|CALX_SCHPO CALNEXIN HOMOLOG PRECURSOR
>gi|1076867|pir||A56106 calnexin homolog cnx1 - fission yeast
(Schizosaccharomyces pombe) >gi|1362221|pir||S56142 calcium-binding
protein precursor cnx1 - fission yeast (Schizosaccharomyces pombe)
>gi|437734|gb|AAA79757.1| (M98799) calcium-binding protein
[Schizosaccharomyces pombe] >gi|532790|gb|AAA68631.1| (U13389)
Cnx1p [Schizosaccharomyces pombe] >gi|2462686|emb|CAB16741.1|
(Z99568) calnexin homolog precursor. [Schizosaccharomyces pombe]
Length = 560
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 560
0 150 300 450
__________________
Annotated Domains:
BLOCKS BL00803A: Calreticulin family proteins. 52..65
BLOCKS BL00803B: Calreticulin family proteins. 89..107
BLOCKS BL00803C: Calreticulin family proteins. 118..140
BLOCKS BL00803D: Calreticulin family proteins. 154..164
BLOCKS BL00803E: Calreticulin family proteins. 198..228
BLOCKS BL00803F: Calreticulin family proteins. 242..272
BLOCKS BL00803G: Calreticulin family proteins. 332..376
BLOCKS BL00803H: Calreticulin family proteins. 383..399
DOMO DM01012: CALRETICULINFAMILY 26..236
DOMO DM00520: CALRETICULINFAMILY 238..270
DOMO DM00520: CALRETICULINFAMILY 272..316
DOMO DM00950: CALRETICULINFAMILY 318..464
Entrez Domain: LUMENAL (POTENTIAL). 23..489
Entrez Transmembrane region: POTENTIAL. 490..512
Entrez Domain: CYTOPLASMIC (POTENTIAL). 513..560
Entrez Domain: 4 X APPROXIMATE REPEATS. 244..310
Entrez Repetitive region: 1-1. 244..255
Entrez Repetitive region: 1-2. 261..272
Entrez Repetitive region: 1-3. 280..291
Entrez Repetitive region: 1-4. 299..310
Entrez Domain: 4 X APPROXIMATE REPEATS. 314..371
Entrez Repetitive region: 2-1. 314..324
Entrez Repetitive region: 2-2. 333..343
Entrez Repetitive region: 2-3. 347..357
Entrez Repetitive region: 2-4. 361..371
Entrez glycosylation site: POTENTIAL. 418
PFAM calreticulin: Calreticulin family 40..406
PRINTS CALRETICULIN1: Calreticulin motif I - 2 127..145
PRINTS CALRETICULIN2: Calreticulin motif II - 2 152..168
PRINTS CALRETICULIN3: Calreticulin motif III - 249..262
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 297..319
PRINTS CALRETICULIN5: Calreticulin motif V - 2 340..359
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 387..407
PRODOM PD134705: CALX_SCHPO 1..42
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 44..405
PRODOM PD134720: CALX_SCHPO 407..559
PROSITE CALRETICULIN_REPEAT: Calreticulin family 259..271
PROSITE CALRETICULIN_REPEAT: Calreticulin family 297..309
PROSITE CALRETICULIN_1: Calreticulin family sign 125..140
PROSITE CALRETICULIN_2: Calreticulin family sign 156..164
__________________
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 16/56 (28%), Positives = 27/56 (48%), Frame = +2
Query: 8 GLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLPPPXXG 175
GL++ ++A +AI + D P+ + +V+ CGGAY+ L P G
Sbjct: 91 GLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLLAEPTHG 146
Score = 69 (24.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 13/32 (40%), Positives = 16/32 (50%), Frame = +3
Query: 189 EFDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
E N I+FGP K G ++ HF F NP
Sbjct: 147 EMSNSIDYRIMFGPDKCGVNDRVHFIFKHKNP 178
>gi|4539689|gb|AAD22175.1|AF107115_1 (AF107115) calreticulin [Trypanosoma
cruzi]
Length = 403
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 403
0 150 300
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 0.0011, Sum P(2) = 0.0011
Identities = 17/51 (33%), Positives = 25/51 (49%), Frame = +2
Query: 8 GLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLP 160
GL ++E AR YA+ P+ + ++V+ KCGG YI LP
Sbjct: 63 GLRLTEDARFYALSTAFPTPITNEKKSLVVSFSVKHEQDLKCGGGYIKLLP 113
Score = 58 (20.4 bits), Expect = 0.0011, Sum P(2) = 0.0011
Identities = 9/27 (33%), Positives = 17/27 (62%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXH 260
+P +F E+ ++FGP + G+ N+ H
Sbjct: 116 DPEKFHGETKYWLMFGPDRCGSQNRVH 142
>gi|5566311|gb|AAD45370.1|AF162779_1 (AF162779) Tc45-calreticulin precursor
[Trypanosoma cruzi]
Length = 401
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 401
0 150 300
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 0.0014, Sum P(2) = 0.0014
Identities = 17/51 (33%), Positives = 25/51 (49%), Frame = +2
Query: 8 GLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLP 160
GL ++E AR YA+ P+ + ++V+ KCGG YI LP
Sbjct: 61 GLRLTEDARFYALSTAFPTPITNEKKSLVVSFSVKHEQDLKCGGGYIKLLP 111
Score = 57 (20.1 bits), Expect = 0.0014, Sum P(2) = 0.0014
Identities = 9/27 (33%), Positives = 17/27 (62%), Frame = +3
Query: 180 NPREFDNESPXSILFGPXKXGATNKXH 260
+P +F E+ ++FGP + G+ N+ H
Sbjct: 114 DPEKFHGETKYWLVFGPDRCGSQNRVH 140
>gi|7293236|gb|AAF48618.1| (AE003502) CG9906 gene product [Drosophila
melanogaster]
Length = 583
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | 583
0 150 300 450
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 0.0044, Sum P(2) = 0.0044
Identities = 14/31 (45%), Positives = 20/31 (64%), Frame = +3
Query: 192 FDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
F++++P +I+FGP K G K HF F NP
Sbjct: 171 FNDKTPYTIMFGPDKCGNNLKMHFIFRHVNP 201
Score = 61 (21.5 bits), Expect = 0.0044, Sum P(2) = 0.0044
Identities = 15/53 (28%), Positives = 24/53 (45%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLK-DXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ AI P K + +V+ L CGG+Y+ L
Sbjct: 107 DLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLL 159
>gi|4650852|dbj|BAA77025.1| (AB026251) calreticulin [Lithospermum
erythrorhizon]
Length = 70
Frame 3 hits (HSPs): ______________________
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | 70
0 20 40 60
Plus Strand HSPs:
Score = 57 (20.1 bits), Expect = 0.0073, Sum P(2) = 0.0072
Identities = 12/30 (40%), Positives = 19/30 (63%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXH 260
D + ++F ++P SI+FGP G +T K H
Sbjct: 34 DIDQKKFGGDTPYSIMFGPDICGYSTKKVH 63
Score = 39 (13.7 bits), Expect = 0.0073, Sum P(2) = 0.0072
Identities = 9/27 (33%), Positives = 11/27 (40%), Frame = +2
Query: 77 KDXTVVLPLRXXLXMASKCGGAYIXYL 157
KD T+V CGG Y+ L
Sbjct: 5 KDKTLVFQFSVKHEQKLDCGGGYMKLL 31
>gi|7292752|gb|AAF48148.1| (AE003488) CG1924 gene product [alt 1] [Drosophila
melanogaster]
Length = 543
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 543
0 150 300 450
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.0094, Sum P(2) = 0.0094
Identities = 13/31 (41%), Positives = 19/31 (61%), Frame = +3
Query: 192 FDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
F++++P +I+FGP K G HF F NP
Sbjct: 168 FNDKTPYTIMFGPDKCGKDVTIHFIFKHVNP 198
Score = 68 (23.9 bits), Expect = 0.0094, Sum P(2) = 0.0094
Identities = 15/53 (28%), Positives = 26/53 (49%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLK-DXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ AI L P K + +V+ + +CGG+Y+ L
Sbjct: 104 DLGLVLKSKAKHAAIAAHLHQPFDFKSEKPLVVQYEITIQKGQECGGSYLKLL 156
>gi|10728202|gb|AAG22345.1| (AE003488) CG1924 gene product [alt 2] [Drosophila
melanogaster]
Length = 556
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | 556
0 150 300 450
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.0099, Sum P(2) = 0.0099
Identities = 13/31 (41%), Positives = 19/31 (61%), Frame = +3
Query: 192 FDNESPXSILFGPXKXGATNKXHFXFXPXNP 284
F++++P +I+FGP K G HF F NP
Sbjct: 168 FNDKTPYTIMFGPDKCGKDVTIHFIFKHVNP 198
Score = 68 (23.9 bits), Expect = 0.0099, Sum P(2) = 0.0099
Identities = 15/53 (28%), Positives = 26/53 (49%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLK-DXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ AI L P K + +V+ + +CGG+Y+ L
Sbjct: 104 DLGLVLKSKAKHAAIAAHLHQPFDFKSEKPLVVQYEITIQKGQECGGSYLKLL 156
>gi|1705568|sp|P52194|CALG_MOUSE CALMEGIN PRECURSOR (MEG 1 ANTIGEN)
(CALNEXIN-T) (A2/6) >gi|539802|pir||A53418 calmegin precursor -
mouse >gi|473720|dbj|BAA03180.1| (D14117) calmegin(Meg 1) [Mus
musculus] >gi|2467379|dbj|BAA22591.1| (D86323) calmegin [Mus
musculus]
Length = 611
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | || 611
0 150 300 450 600
__________________
Annotated Domains:
BLOCKS BL00803A: Calreticulin family proteins. 72..85
BLOCKS BL00803B: Calreticulin family proteins. 108..126
BLOCKS BL00803C: Calreticulin family proteins. 137..159
BLOCKS BL00803D: Calreticulin family proteins. 176..186
BLOCKS BL00803E: Calreticulin family proteins. 223..253
BLOCKS BL00803F: Calreticulin family proteins. 267..297
BLOCKS BL00803G: Calreticulin family proteins. 355..399
BLOCKS BL00803H: Calreticulin family proteins. 406..422
DOMO DM01012: CALRETICULINFAMILY 44..261
DOMO DM00520: CALRETICULINFAMILY 263..295
DOMO DM00520: CALRETICULINFAMILY 297..340
DOMO DM00950: CALRETICULINFAMILY 342..490
Entrez Domain: LUMENAL (POTENTIAL). 20..471
Entrez Transmembrane region: POTENTIAL. 472..492
Entrez Domain: CYTOPLASMIC (POTENTIAL). 493..611
Entrez Domain: 4 X APPROXIMATE REPEATS. 267..335
Entrez Repetitive region: 1-1. 267..280
Entrez Repetitive region: 1-2. 284..297
Entrez Repetitive region: 1-3. 303..316
Entrez Repetitive region: 1-4. 322..335
Entrez Domain: 4 X APPROXIMATE REPEATS. 339..397
Entrez Repetitive region: 2-1. 339..352
Entrez Repetitive region: 2-2. 356..369
Entrez Repetitive region: 2-3. 370..383
Entrez Repetitive region: 2-4. 384..397
PFAM calreticulin: Calreticulin family 60..429
PRINTS CALRETICULIN1: Calreticulin motif I - 2 146..164
PRINTS CALRETICULIN2: Calreticulin motif II - 2 174..190
PRINTS CALRETICULIN3: Calreticulin motif III - 274..287
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 322..344
PRINTS CALRETICULIN5: Calreticulin motif V - 2 363..382
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 410..430
PRODOM PD041480: CALG(2) 1..58
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 60..428
PRODOM PD008737: CALX(5) CALG(2) Q98985(1) 430..490
PRODOM PD189011: CALG(2) 492..520
PRODOM PD134717: CALG_MOUSE 534..576
PRODOM PD026303: CALG(2) 578..610
PROSITE CALRETICULIN_REPEAT: Calreticulin family 284..296
PROSITE SUBTILASE_ASP: Serine proteases, subtila 19..30
PROSITE CALRETICULIN_1: Calreticulin family sign 144..159
PROSITE CALRETICULIN_2: Calreticulin family sign 178..186
__________________
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 0.021, Sum P(2) = 0.021
Identities = 16/52 (30%), Positives = 25/52 (48%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI L+ P D +++ CGGAYI L
Sbjct: 108 DRGLVLKSKAKHHAIAAVLEKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLL 159
Score = 59 (20.8 bits), Expect = 0.021, Sum P(2) = 0.021
Identities = 14/36 (38%), Positives = 20/36 (55%), Frame = +3
Query: 192 FDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
F +++ +I+FGP K G K H F +P K GV
Sbjct: 170 FYDKTSYTIMFGPDKCGEDYKLHLIFRHKHP-KTGV 204
>gi|4758004 ref|NP_004353.1| calmegin [Homo sapiens] >gi|11435378
ref|XP_003352.1| calmegin [Homo sapiens]
>gi|3121839|sp|O14967|CALG_HUMAN CALMEGIN PRECURSOR
>gi|2467377|dbj|BAA22590.1| (D86322) calmegin [Homo sapiens]
Length = 610
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | || 610
0 150 300 450 600
Plus Strand HSPs:
Score = 71 (25.0 bits), Expect = 0.050, Sum P(2) = 0.049
Identities = 16/52 (30%), Positives = 24/52 (46%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D GL++ +A+ +AI L P D +++ CGGAYI L
Sbjct: 108 DRGLVLKSRAKHHAISAVLAKPFIFADKPLIVQYEVNFQDGIDCGGAYIKLL 159
Score = 62 (21.8 bits), Expect = 0.050, Sum P(2) = 0.049
Identities = 15/36 (41%), Positives = 20/36 (55%), Frame = +3
Query: 192 FDNESPXSILFGPXKXGATNKXHFXFXPXNPXKWGV 299
F +++ I+FGP K G K HF F +P K GV
Sbjct: 170 FYDKTSYIIMFGPDKCGEDYKLHFIFRHKHP-KTGV 204
>gi|3913371|sp|Q23858|CRTC_DICDI CALRETICULIN PRECURSOR
>gi|2654398|gb|AAB87719.1| (U36937) calreticulin [Dictyostelium
discoideum]
Length = 424
Frame 3 hits (HSPs): ___
Frame 2 hits (HSPs): _______
Annotated Domains: __________________________________________ _
__________________________________________________
Database sequence: | | | | 424
0 150 300
__________________
Annotated Domains:
Entrez Domain: 4 X 12 AA APPROXIMATE REPEATS. 191..257
Entrez Repetitive region: 1-1. 191..202
Entrez Repetitive region: 1-2. 211..222
Entrez Repetitive region: 1-3. 227..238
Entrez Repetitive region: 1-4. 246..257
Entrez Domain: 3 X 11 AA APPROXIMATE REPEATS. 260..298
Entrez Repetitive region: 2-1. 260..270
Entrez Repetitive region: 2-2. 274..284
Entrez Repetitive region: 2-3. 288..298
Entrez other site: PREVENT SECRETION FROM ER (P 421..424
PFAM calreticulin: Calreticulin family 21..333
PRINTS CALRETICULIN1: Calreticulin motif I - 2 100..118
PRINTS CALRETICULIN2: Calreticulin motif II - 2 126..142
PRINTS CALRETICULIN3: Calreticulin motif III - 215..228
PRINTS CALRETICULIN4: Calreticulin motif IV - 2 243..265
PRINTS CALRETICULIN5: Calreticulin motif V - 2 281..300
PRINTS CALRETICULIN6: Calreticulin motif VI - 2 314..334
PRODOM PD001866: CALX(9) CRTC(8) CALG(2) 21..332
PRODOM PD165052: CRTC_DICDI 334..373
PROSITE CALRETICULIN_REPEAT: Calreticulin family 243..255
PROSITE CALRETICULIN_2: Calreticulin family sign 130..138
__________________
Plus Strand HSPs:
Score = 66 (23.2 bits), Expect = 0.10, Sum P(2) = 0.099
Identities = 18/51 (35%), Positives = 22/51 (43%), Frame = +2
Query: 8 GLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLP 160
G+ SE AR YA+ K K +VL CGG+YI LP
Sbjct: 65 GIQTSEDARFYAVSAKFPS-FSNKGKDLVLQYTVKNEQKVDCGGSYIKLLP 114
Score = 63 (22.2 bits), Expect = 0.10, Sum P(2) = 0.099
Identities = 12/23 (52%), Positives = 15/23 (65%), Frame = +3
Query: 192 FDNESPXSILFGPXKXGATNKXH 260
FD ES SI+FGP GA+ + H
Sbjct: 122 FDGESEYSIMFGPDVCGASKRVH 144
>gi|345588|pir||S29129 calreticulin precursor (clone 3) - African clawed frog
(fragment) >gi|64609|emb|CAA47866.1| (X67597) calreticulin [Xenopus
laevis] >gi|258665|gb|AAB23891.1| calreticulin {clone 3} [Xenopus
laevis, brain, Peptide, 411 aa]
Length = 411
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ________
Annotated Domains: __ ___ __ _____ _ _
__________________________________________________
Database sequence: | | | | 411
0 150 300
__________________
Annotated Domains:
Entrez domain: signal sequence (fragment) 1..12
Entrez region: endoplasmic reticulum retention 408..411
Entrez binding site: carbohydrate (Asn) (covale 339
PROSITE CALRETICULIN_REPEAT: Calreticulin family 220..232
PROSITE CALRETICULIN_REPEAT: Calreticulin family 237..249
PROSITE CALRETICULIN_1: Calreticulin family sign 93..108
PROSITE CALRETICULIN_2: Calreticulin family sign 125..133
__________________
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 0.10, Sum P(2) = 0.099
Identities = 18/53 (33%), Positives = 24/53 (45%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLP 160
D GL S+ AR YA+ + D KD T+V+ CGG Y+ P
Sbjct: 58 DKGLQTSQDARFYAMSSRFDS-FSNKDQTLVVQFSVKHEQNIDCGGGYVKLFP 109
Score = 48 (16.9 bits), Expect = 0.10, Sum P(2) = 0.099
Identities = 12/28 (42%), Positives = 14/28 (50%), Frame = +3
Query: 189 EFDNESPXSILFGPXKXGA-TNKXHFXF 269
E ES +I+FGP G T K H F
Sbjct: 116 EMHEESEYNIMFGPDICGPPTKKVHVIF 143
>gi|11131946|sp|Q9ZNY3|CRTC_EUGGR CALRETICULIN PRECURSOR
>gi|3970687|emb|CAA70945.1| (Y09816) calreticulin precursor
[Euglena gracilis]
Length = 401
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 401
0 150 300
Plus Strand HSPs:
Score = 66 (23.2 bits), Expect = 0.14, Sum P(2) = 0.13
Identities = 12/25 (48%), Positives = 16/25 (64%), Frame = +3
Query: 189 EFDNESPXSILFGPXKXGATNKXHF 263
+F ++P I+FGP GAT K HF
Sbjct: 118 KFTGDTPYHIMFGPDICGATKKIHF 142
Score = 61 (21.5 bits), Expect = 0.14, Sum P(2) = 0.13
Identities = 15/53 (28%), Positives = 22/53 (41%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLP 160
D G+ S+ A+ YAI + + +VL CGG Y+ LP
Sbjct: 60 DAGIQTSQDAKFYAISSPIASSFSNEGKDLVLQFSVKHEQDIDCGGGYLKLLP 112
>gi|2597972|emb|CAA04877.1| (AJ001621) RAL-1 protein [Litomosoides sigmodontis]
Length = 375
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 375
0 150 300
Plus Strand HSPs:
Score = 64 (22.5 bits), Expect = 0.20, Sum P(2) = 0.18
Identities = 14/33 (42%), Positives = 17/33 (51%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXHFXF 269
D N +F E+P I+FGP G T K H F
Sbjct: 114 DANLEDFHGETPYHIMFGPDICGPGTKKVHVIF 146
Score = 62 (21.8 bits), Expect = 0.20, Sum P(2) = 0.18
Identities = 14/49 (28%), Positives = 22/49 (44%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYI 148
D GL ++ A+ Y+I K D K ++V+ CGG Y+
Sbjct: 60 DKGLKTTQDAKFYSIGAKFDKGFSNKGKSLVIQFSVKHEQDIDCGGGYV 108
>gi|6680836 ref|NP_031617.1| calreticulin [Mus musculus]
>gi|117502|sp|P14211|CRTC_MOUSE CALRETICULIN PRECURSOR (CRP55)
(CALREGULIN) (HACBP) (ERP60) >gi|90353|pir||S06763 calreticulin
precursor - mouse >gi|50568|emb|CAA33053.1| (X14926) calreticulin
precursor protein [Mus musculus] >gi|193085|gb|AAA37569.1| (M92988)
calregulin [Mus musculus]
Length = 416
Frame 3 hits (HSPs): ____
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 416
0 150 300
Plus Strand HSPs:
Score = 75 (26.4 bits), Expect = 0.22, Sum P(2) = 0.19
Identities = 18/53 (33%), Positives = 24/53 (45%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLP 160
D GL S+ AR YA+ K + P K T+V+ CGG Y+ P
Sbjct: 63 DKGLQTSQDARFYALSAKFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFP 114
Score = 45 (15.8 bits), Expect = 0.22, Sum P(2) = 0.19
Identities = 10/29 (34%), Positives = 15/29 (51%), Frame = +3
Query: 186 REFDNESPXSILFGPXKXG-ATNKXHFXF 269
++ +S +I+FGP G T K H F
Sbjct: 120 KDMHGDSEYNIMFGPDICGPGTKKVHVIF 148
>gi|64611|emb|CAA47867.1| (X67598) calreticulin [Xenopus laevis]
Length = 343
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 343
0 150 300
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 0.22, Sum P(2) = 0.20
Identities = 17/53 (32%), Positives = 24/53 (45%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLP 160
D GL S+ AR YA+ + + KD T+V+ CGG Y+ P
Sbjct: 35 DKGLQTSQDARFYAMSSRFES-FSNKDQTLVIQFSVKHEQNIDCGGGYVKLFP 86
Score = 48 (16.9 bits), Expect = 0.22, Sum P(2) = 0.20
Identities = 12/28 (42%), Positives = 14/28 (50%), Frame = +3
Query: 189 EFDNESPXSILFGPXKXGA-TNKXHFXF 269
E ES +I+FGP G T K H F
Sbjct: 93 EMHGESEYNIMFGPDICGPPTKKVHVIF 120
>gi|575359|emb|CAA57914.1| (X82578) calreticulin [Parthenium argentatum]
Length = 101
Frame 3 hits (HSPs): __________
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | || 101
0 20 40 60 80 100
Plus Strand HSPs:
Score = 58 (20.4 bits), Expect = 0.25, Sum P(2) = 0.22
Identities = 17/52 (32%), Positives = 21/52 (40%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D G+ SE R YAI + KD T+V CGG Y+ L
Sbjct: 18 DKGIQTSEDYRFYAISAEYPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLL 68
Score = 48 (16.9 bits), Expect = 0.25, Sum P(2) = 0.22
Identities = 8/19 (42%), Positives = 14/19 (73%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGP 230
D + ++F ++P SI+FGP
Sbjct: 71 DIDQKKFGGDTPYSIMFGP 89
>gi|2052381|gb|AAC49696.1| (U66344) calreticulin [Arabidopsis thaliana]
Length = 171
Frame 3 hits (HSPs): __________
Frame 2 hits (HSPs): _______________
__________________________________________________
Database sequence: | | | | | 171
0 50 100 150
Plus Strand HSPs:
Score = 59 (20.8 bits), Expect = 0.27, Sum P(2) = 0.24
Identities = 17/52 (32%), Positives = 21/52 (40%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D G+ SE R YAI + KD T+V CGG Y+ L
Sbjct: 63 DKGIQTSEDYRFYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLL 113
Score = 58 (20.4 bits), Expect = 0.27, Sum P(2) = 0.24
Identities = 12/30 (40%), Positives = 19/30 (63%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXH 260
D + ++F ++P SI+FGP G +T K H
Sbjct: 116 DVDQKKFGGDTPYSIMFGPDICGYSTKKVH 145
>gi|419976|pir||S29130 calreticulin (clone 8) - African clawed frog (fragment)
>gi|258664|gb|AAB23890.1| calreticulin {clone 8} [Xenopus laevis,
brain, Peptide Partial, 384 aa]
Length = 384
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): ________
Annotated Domains: ___ __ _______ _ _
__________________________________________________
Database sequence: | | | | 384
0 150 300
__________________
Annotated Domains:
Entrez region: endoplasmic reticulum retention 381..384
Entrez binding site: carbohydrate (Asn) (covale 316
PROSITE CALRETICULIN_REPEAT: Calreticulin family 180..192
PROSITE CALRETICULIN_REPEAT: Calreticulin family 197..209
PROSITE CALRETICULIN_REPEAT: Calreticulin family 214..226
PROSITE CALRETICULIN_1: Calreticulin family sign 70..85
PROSITE CALRETICULIN_2: Calreticulin family sign 102..110
__________________
Plus Strand HSPs:
Score = 72 (25.3 bits), Expect = 0.30, Sum P(2) = 0.26
Identities = 17/53 (32%), Positives = 24/53 (45%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYLP 160
D GL S+ AR YA+ + + KD T+V+ CGG Y+ P
Sbjct: 35 DKGLQTSQDARFYAMSSRFES-FSNKDQTLVIQFSVKHEQNIDCGGGYVKLFP 86
Score = 48 (16.9 bits), Expect = 0.30, Sum P(2) = 0.26
Identities = 12/28 (42%), Positives = 14/28 (50%), Frame = +3
Query: 189 EFDNESPXSILFGPXKXGA-TNKXHFXF 269
E ES +I+FGP G T K H F
Sbjct: 93 EMHGESEYNIMFGPDICGPPTKKVHVIF 120
>gi|11131838|sp|Q9SLY8|CRTC_ORYSA CALRETICULIN PRECURSOR
>gi|6682833|dbj|BAA88900.1| (AB021259) calcium-binding protein
[Oryza sativa]
Length = 424
Frame 3 hits (HSPs): _____
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 424
0 150 300
Plus Strand HSPs:
Score = 64 (22.5 bits), Expect = 0.33, Sum P(2) = 0.28
Identities = 18/52 (34%), Positives = 22/52 (42%), Frame = +2
Query: 2 DYGLLVSEQARKYAIXXKLDXPVXLKDXTVVLPLRXXLXMASKCGGAYIXYL 157
D G+ SE R YAI + KD T+VL CGG Y+ L
Sbjct: 73 DKGIQTSEDYRFYAISAEYPE-FSNKDKTLVLQFSVKHEQKLDCGGGYVKLL 123
Score = 61 (21.5 bits), Expect = 0.33, Sum P(2) = 0.28
Identities = 13/33 (39%), Positives = 20/33 (60%), Frame = +3
Query: 174 DGNPREFDNESPXSILFGPXKXG-ATNKXHFXF 269
D + ++F ++P SI+FGP G +T K H F
Sbjct: 126 DVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIF 158
WARNING: HSPs involving 24 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.88
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.329 0.149 0.495
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.345 0.156 0.585
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.357 0.159 0.642
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.324 0.143 0.457
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.339 0.150 0.495
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.346 0.159 0.540
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 141 116 10. 70 3 12 22 0.093 33
29 0.10 35
+2 0 142 114 10. 70 3 12 22 0.091 33
29 0.099 35
+1 0 142 115 10. 70 3 12 22 0.092 33
29 0.10 35
-1 0 142 115 10. 70 3 12 22 0.092 33
29 0.10 35
-2 0 142 113 10. 70 3 12 22 0.12 32
29 0.097 35
-3 0 141 109 10. 69 3 12 22 0.12 32
29 0.12 34
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 74
No. of states in DFA: 590 (58 KB)
Total size of DFA: 143 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 106.83u 1.02s 107.85t Elapsed: 00:00:18
Total cpu time: 106.88u 1.05s 107.93t Elapsed: 00:00:18
Start: Wed Oct 3 11:47:55 2001 End: Wed Oct 3 11:48:13 2001
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000