BLASTP 2.2.4 [Aug-26-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SAG0060
(98 letters)
Database: nr
1,487,057 sequences; 479,114,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15674289|ref|NP_268462.1| 50S ribosomal protein L23 [Streptoc... 149 1e-35
gi|22536245|ref|NP_687096.1| ribosomal protein L23 [Streptococcu... 148 2e-35
gi|15900147|ref|NP_344751.1| ribosomal protein L23 [Streptococcu... 143 6e-34
gi|15674079|ref|NP_268254.1| 50S ribosomal protein L23 [Lactococ... 115 2e-25
gi|29374853|ref|NP_814006.1| ribosomal protein L23 [Enterococcus... 105 1e-22
gi|15612699|ref|NP_241002.1| 50S ribosomal protein L23; ribosoma... 92 1e-18
gi|30018382|ref|NP_830013.1| LSU ribosomal protein L23P [Bacillu... 92 2e-18
gi|3273331|dbj|BAA31209.1| ribosomal protrein L23 [Geobacillus s... 89 1e-17
gi|132795|sp|P04454|RL23_BACST 50S RIBOSOMAL PROTEIN L23 >gnl|BL... 88 3e-17
gi|16077186|ref|NP_387999.1| ribosomal protein L23 [Bacillus sub... 86 1e-16
gi|16804668|ref|NP_466153.1| ribosomal protein L23 [Listeria mon... 86 1e-16
gi|16801840|ref|NP_472108.1| ribosomal protein L23 [Listeria inn... 86 1e-16
gi|15925238|ref|NP_372772.1| 50S ribosomal protein L23 [Staphylo... 82 2e-15
gi|27468740|ref|NP_765377.1| 50S ribosomal protein L23 [Staphylo... 81 3e-15
gi|23097576|ref|NP_691042.1| 50S ribosomal protein L23 [Oceanoba... 80 7e-15
gi|23003723|ref|ZP_00047375.1| hypothetical protein [Lactobacill... 80 7e-15
gi|15896381|ref|NP_349730.1| Ribosomal protein L23 [Clostridium ... 79 2e-14
gi|20808658|ref|NP_623829.1| Ribosomal protein L23 [Thermoanaero... 79 2e-14
gi|23042770|ref|ZP_00074129.1| hypothetical protein [Trichodesmi... 78 3e-14
gi|23123365|ref|ZP_00105500.1| hypothetical protein [Prochloroco... 77 6e-14
gi|23132191|ref|ZP_00113976.1| hypothetical protein [Prochloroco... 76 9e-14
gi|23134456|ref|ZP_00116230.1| hypothetical protein [Synechococc... 72 1e-12
gi|33241159|ref|NP_876101.1| Ribosomal protein L23 [Prochlorococ... 72 2e-12
gi|22973750|ref|ZP_00020261.1| hypothetical protein [Chloroflexu... 72 2e-12
gi|15805342|ref|NP_294036.1| ribosomal protein L23 [Deinococcus ... 71 3e-12
gi|23112029|ref|ZP_00097574.1| hypothetical protein [Desulfitoba... 70 7e-12
gi|29726805|pdb|1NWX|R Chain R, Complex Of The Large Ribosomal S... 70 7e-12
gi|3122704|sp|O24691|RL23_SYNP6 50S ribosomal protein L23 >gnl|B... 70 8e-12
gi|15644246|ref|NP_229298.1| ribosomal protein L23 [Thermotoga m... 69 2e-11
gi|28377834|ref|NP_784726.1| ribosomal protein L23 [Lactobacillu... 69 2e-11
gi|16329939|ref|NP_440667.1| 50S ribosomal protein L23 [Synechoc... 68 3e-11
gi|17231705|ref|NP_488253.1| 50S ribosomal protein L23 [Nostoc s... 68 3e-11
gi|23022269|ref|ZP_00061885.1| hypothetical protein [Clostridium... 67 4e-11
gi|12751546|ref|NP_043615.2| ribosomal protein L23 [Odontella si... 67 6e-11
gi|18311385|ref|NP_563319.1| 50S ribosomal protein L23 [Clostrid... 67 7e-11
gi|22297627|ref|NP_680874.1| 50S ribosomal protein L23 [Thermosy... 66 1e-10
gi|21398072|ref|NP_654057.1| Ribosomal_L23, Ribosomal protein L2... 65 3e-10
gi|11466369|ref|NP_038372.1| ribosomal protein L23 [Mesostigma v... 65 3e-10
gi|23124124|ref|ZP_00106135.1| hypothetical protein [Nostoc punc... 64 5e-10
gi|23018360|ref|ZP_00058077.1| hypothetical protein [Thermobifid... 64 7e-10
gi|3122700|sp|O06046|RL23_MYCBO 50S RIBOSOMAL PROTEIN L23 >gnl|B... 63 9e-10
gi|33357420|pdb|1N88|A Chain A, Nmr Structure Of The Ribosomal P... 63 1e-09
gi|7674252|sp|Q9ZI48|RL23_AQUPY 50S ribosomal protein L23 >gnl|B... 62 1e-09
gi|15829057|ref|NP_326417.1| 50S RIBOSOMAL PROTEIN L23 [Mycoplas... 62 1e-09
gi|11465778|ref|NP_053922.1| ribosomal protein L23 [Porphyra pur... 62 2e-09
gi|15828000|ref|NP_302263.1| 50S ribosomal protein L23 [Mycobact... 62 3e-09
gi|132803|sp|P10140|RL23_MYCCA 50S RIBOSOMAL PROTEIN L23 >gnl|BL... 61 3e-09
gi|29831471|ref|NP_826105.1| putative ribosomal protein L23 [Str... 61 4e-09
gi|15607843|ref|NP_215217.1| rplW [Mycobacterium tuberculosis H3... 60 6e-09
gi|28493519|ref|NP_787680.1| 50S ribosomal protein L23 [Trophery... 59 1e-08
gi|23306475|gb|AAM08937.1| 50S ribosomal protein L23 [Mycoplasma... 59 2e-08
gi|19551748|ref|NP_599750.1| ribosomal protein L23 [Corynebacter... 59 2e-08
gi|25027080|ref|NP_737134.1| putative 50S ribosomal protein L23 ... 59 2e-08
gi|11467719|ref|NP_050771.1| ribosomal protein L23 [Guillardia t... 59 2e-08
gi|15604503|ref|NP_221021.1| 50S RIBOSOMAL PROTEIN L23 (rplW) [R... 59 2e-08
gi|19704964|ref|NP_602459.1| LSU ribosomal protein L23P [Fusobac... 58 3e-08
gi|22711956|ref|NP_683844.1| ribosomal protein L23 [Chaetosphaer... 58 4e-08
gi|15892927|ref|NP_360641.1| 50S ribosomal protein L23 [Ricketts... 57 4e-08
gi|17987042|ref|NP_539676.1| LSU ribosomal protein L23P [Brucell... 57 6e-08
gi|15605618|ref|NP_212991.1| ribosomal protein L23 [Aquifex aeol... 57 6e-08
gi|27886200|gb|EAA23490.1| LSU ribosomal protein L23P [Fusobacte... 57 6e-08
gi|13470553|ref|NP_102122.1| 50S ribosomal protein L23 [Mesorhiz... 57 6e-08
gi|28262756|gb|EAA26260.1| 50S ribosomal protein L23 [Rickettsia... 57 6e-08
gi|7524699|ref|NP_042453.1| ribosomal protein L23 [Pinus thunber... 57 7e-08
gi|28202215|ref|NP_777456.1| ribosomal protein L23 [Anthoceros f... 57 7e-08
gi|6093984|sp|O62961|RK23_PICAB CHLOROPLAST 50S RIBOSOMAL PROTEI... 57 8e-08
gi|11467777|ref|NP_050828.1| ribosomal protein L23 [Nephroselmis... 57 8e-08
gi|29565656|ref|NP_817237.1| ribosomal protein L23 [Pinus koraie... 56 1e-07
gi|23336503|ref|ZP_00121717.1| hypothetical protein [Bifidobacte... 56 1e-07
gi|23502108|ref|NP_698235.1| ribosomal protein L23 [Brucella sui... 56 1e-07
gi|21223084|ref|NP_628863.1| 50S ribosomal protein L23 [Streptom... 56 2e-07
gi|23014086|ref|ZP_00053923.1| hypothetical protein [Magnetospir... 56 2e-07
gi|32699673|sp|Q8HTL3|RK23_CHLRE Chloroplast 50S ribosomal prote... 55 2e-07
gi|15965111|ref|NP_385464.1| PROBABLE 50S RIBOSOMAL PROTEIN L23 ... 55 2e-07
gi|27380509|ref|NP_772038.1| 50S ribosomal protein L23 [Bradyrhi... 54 4e-07
gi|15639184|ref|NP_218630.1| ribosomal protein L23 (rplW) [Trepo... 54 5e-07
gi|132809|sp|P11535|RK23_WHEAT Chloroplast 50S ribosomal protein... 54 6e-07
gi|22965159|ref|ZP_00012765.1| hypothetical protein [Rhodopseudo... 54 7e-07
gi|11466746|ref|NP_039342.1| ribosomal protein L23 [Marchantia p... 54 8e-07
gi|23006442|ref|ZP_00048759.1| hypothetical protein [Magnetospir... 53 8e-07
gi|11467236|ref|NP_043068.1| ribosomal protein L23 [Zea mays] >g... 53 9e-07
gi|11466832|ref|NP_039429.1| ribosomal protein L23 [Oryza sativa... 53 1e-06
gi|22966120|ref|ZP_00013717.1| hypothetical protein [Rhodospiril... 52 2e-06
gi|710565|gb|AAA84593.1| ribosomal protein L23 [Oryza sativa] >g... 52 2e-06
gi|22998289|ref|ZP_00042389.1| hypothetical protein [Magnetococc... 52 3e-06
gi|15889240|ref|NP_354921.1| AGR_C_3552p [Agrobacterium tumefaci... 52 3e-06
gi|32475060|ref|NP_868054.1| 50S ribosomal protein L23 [Pirellul... 52 3e-06
gi|15676071|ref|NP_273202.1| 50S ribosomal protein L23 [Neisseri... 51 3e-06
gi|19920147|gb|AAM08579.1|AC092750_13 Putative ribosomal protein... 51 4e-06
gi|7525075|ref|NP_051100.1| ribosomal protein L23 [Arabidopsis t... 50 9e-06
gi|22956507|ref|ZP_00004270.1| hypothetical protein [Rhodobacter... 49 2e-05
gi|15618555|ref|NP_224841.1| L23 Ribosomal Protein [Chlamydophil... 49 2e-05
gi|11465424|ref|NP_045185.1| ribosomal protein L23 [Cyanidium ca... 49 3e-05
gi|26987197|ref|NP_742622.1| ribosomal protein L23 [Pseudomonas ... 48 3e-05
gi|99754|pir||S26305 ribosomal protein L23 - Arabidopsis thalian... 48 3e-05
gi|30248420|ref|NP_840490.1| Ribosomal L23 protein [Nitrosomonas... 48 4e-05
gi|23104441|ref|ZP_00090905.1| hypothetical protein [Azotobacter... 48 4e-05
gi|11465999|ref|NP_054541.1| ribosomal protein L23 [Nicotiana ta... 46 1e-04
>gi|15674289|ref|NP_268462.1| 50S ribosomal protein L23
[Streptococcus pyogenes]
gi|19745243|ref|NP_606379.1| 50S ribosomal protein L23
[Streptococcus pyogenes MGAS8232]
gi|21909578|ref|NP_663846.1| 50S ribosomal protein L23
[Streptococcus pyogenes MGAS315]
gi|28894956|ref|NP_801306.1| 50S ribosomal protein L23
[Streptococcus pyogenes SSI-1]
gi|13621369|gb|AAK33184.1| 50S ribosomal protein L23
[Streptococcus pyogenes M1 GAS]
gi|19747337|gb|AAL96878.1| 50S ribosomal protein L23
[Streptococcus pyogenes MGAS8232]
gi|21903759|gb|AAM78649.1| 50S ribosomal protein L23
[Streptococcus pyogenes MGAS315]
gi|28810201|dbj|BAC63139.1| 50S ribosomal protein L23
[Streptococcus pyogenes SSI-1]
Length = 98
Score = 149 bits (375), Expect = 1e-35
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
MNLYDVIKKPVITEKSM+ALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTV VK
Sbjct: 1 MNLYDVIKKPVITEKSMIALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVNVK 60
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE 98
PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE
Sbjct: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE 98
>gi|22536245|ref|NP_687096.1| ribosomal protein L23 [Streptococcus
agalactiae 2603V/R]
gi|25010135|ref|NP_734530.1| ribosomal protein L23 [Streptococcus
agalactiae NEM316]
gi|22533065|gb|AAM98968.1|AE014194_13 ribosomal protein L23
[Streptococcus agalactiae 2603V/R]
gi|23094486|emb|CAD45705.1| ribosomal protein L23 [Streptococcus
agalactiae NEM316]
Length = 98
Score = 148 bits (373), Expect = 2e-35
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK
Sbjct: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE 98
PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE
Sbjct: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE 98
>gi|15900147|ref|NP_344751.1| ribosomal protein L23 [Streptococcus
pneumoniae TIGR4]
gi|15902234|ref|NP_357784.1| 50S Ribosomal protein L23
[Streptococcus pneumoniae R6]
gi|25295427|pir||F95024 ribosomal protein L23 [imported] -
Streptococcus pneumoniae (strain TIGR4)
gi|25295428|pir||F97895 50S ribosomal protein L23 [imported] -
Streptococcus pneumoniae (strain R6)
gi|14971679|gb|AAK74391.1| ribosomal protein L23 [Streptococcus
pneumoniae TIGR4]
gi|15457734|gb|AAK98994.1| 50S Ribosomal protein L23
[Streptococcus pneumoniae R6]
Length = 98
Score = 143 bits (360), Expect = 6e-34
Identities = 89/98 (90%), Positives = 93/98 (94%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
MNLYDVIKKPVITE SM LEAGKY FEVDTRAHKLLIKQAVEAAF+GVKVA+VNT+ VK
Sbjct: 1 MNLYDVIKKPVITESSMAQLEAGKYVFEVDTRAHKLLIKQAVEAAFEGVKVANVNTINVK 60
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE 98
PKAKRVGRYTGFT+KTKKAIITLTADSKAIELFAAEAE
Sbjct: 61 PKAKRVGRYTGFTNKTKKAIITLTADSKAIELFAAEAE 98
>gi|15674079|ref|NP_268254.1| 50S ribosomal protein L23
[Lactococcus lactis subsp. lactis]
gi|25295415|pir||A86887 50S ribosomal protein L23 [imported] -
Lactococcus lactis subsp. lactis (strain IL1403)
gi|12725151|gb|AAK06195.1|AE006438_9 50S ribosomal protein L23
[Lactococcus lactis subsp. lactis]
Length = 97
Score = 115 bits (287), Expect = 2e-25
Identities = 70/98 (71%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M+LYD+I+KP+ITE SM A++ KYTFEVD+RAHKLLIKQAVEA F GVKVASVNT++VK
Sbjct: 1 MSLYDIIRKPIITEASMAAMDQKKYTFEVDSRAHKLLIKQAVEAVF-GVKVASVNTISVK 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE 98
PK+KRVG+YTG S KKAI+TLT DSK IE+F +AE
Sbjct: 60 PKSKRVGKYTGTKSGYKKAIVTLTEDSKTIEIFGEDAE 97
>gi|29374853|ref|NP_814006.1| ribosomal protein L23 [Enterococcus
faecalis V583]
gi|29342311|gb|AAO80077.1| ribosomal protein L23 [Enterococcus
faecalis V583]
Length = 96
Score = 105 bits (262), Expect = 1e-22
Identities = 64/95 (67%), Positives = 80/95 (83%), Gaps = 1/95 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M L DVIK+PVITEKSM+A++ KYTFEVDTRA+K L+KQAVE+AFD VKVA+VN + V+
Sbjct: 1 MELLDVIKRPVITEKSMLAMDEKKYTFEVDTRANKTLVKQAVESAFD-VKVANVNILNVR 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAA 95
PK KR+G+Y G+T K +KAI+TLT DSK I+LF A
Sbjct: 60 PKFKRMGKYAGYTKKRRKAIVTLTEDSKEIQLFEA 94
>gi|15612699|ref|NP_241002.1| 50S ribosomal protein L23; ribosomal
protein L23 [Bacillus halodurans]
gi|7674249|sp|Q9Z9L2|RL23_BACHD 50S ribosomal protein L23
gi|11276846|pir||T44385 ribosomal protein L23 rplW [imported] -
Bacillus halodurans (strain C-125)
gi|4512406|dbj|BAA75273.1| rplW homologue (identity of 71% to B.
subtilis ) [Bacillus halodurans]
gi|10172748|dbj|BAB03855.1| 50S ribosomal protein L23 [Bacillus
halodurans]
Length = 96
Score = 92.4 bits (228), Expect = 1e-18
Identities = 56/92 (60%), Positives = 67/92 (71%), Gaps = 1/92 (1%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
N DVIK+PVITE+S + KYTFEVD RA+K IK A+E FD VKVA VNT+ K
Sbjct: 3 NARDVIKRPVITERSTEVMGDKKYTFEVDVRANKTQIKDAIEEIFD-VKVAKVNTMNYKG 61
Query: 62 KAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KR GRYTGFT++ KKAI+TLT DSK ++ F
Sbjct: 62 KPKRFGRYTGFTARRKKAIVTLTPDSKELDFF 93
>gi|30018382|ref|NP_830013.1| LSU ribosomal protein L23P [Bacillus
cereus ATCC 14579]
gi|30260303|ref|NP_842680.1| ribosomal protein L23 [Bacillus
anthracis str. Ames]
gi|29893922|gb|AAP07214.1| LSU ribosomal protein L23P [Bacillus
cereus ATCC 14579]
gi|30253624|gb|AAP24166.1| ribosomal protein L23 [Bacillus
anthracis str. Ames]
Length = 96
Score = 91.7 bits (226), Expect = 2e-18
Identities = 53/89 (59%), Positives = 69/89 (76%), Gaps = 1/89 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D+IK+PVITE+SM + KYTF+VD +++K +K A+EA F GVKV VN + KPKAK
Sbjct: 6 DIIKRPVITERSMEMMAEKKYTFDVDVKSNKTEVKDALEAIF-GVKVEKVNIMNYKPKAK 64
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELF 93
RVGR+ GFTS+ +KAI+ LTADSK IE+F
Sbjct: 65 RVGRHAGFTSRRRKAIVKLTADSKEIEIF 93
>gi|3273331|dbj|BAA31209.1| ribosomal protrein L23 [Geobacillus
stearothermophilus]
Length = 95
Score = 89.0 bits (219), Expect = 1e-17
Identities = 52/89 (58%), Positives = 67/89 (74%), Gaps = 1/89 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D+IK+P+ITE +M + KYTFEVD +A+K +K AVE F GVKVA VN + K K K
Sbjct: 6 DIIKRPIITENTMNLIGQKKYTFEVDVKANKTEVKDAVEKIF-GVKVAKVNIMNYKGKFK 64
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELF 93
RVGRY+G+T++ +KAI+TLT DSK IELF
Sbjct: 65 RVGRYSGYTNRRRKAIVTLTPDSKEIELF 93
>gi|132795|sp|P04454|RL23_BACST 50S RIBOSOMAL PROTEIN L23
gi|71295|pir||R5BS23 ribosomal protein L23 - Bacillus
stearothermophilus
Length = 95
Score = 87.8 bits (216), Expect = 3e-17
Identities = 52/89 (58%), Positives = 66/89 (73%), Gaps = 1/89 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D+IK+P+ITE +M + KYTFEVD +A+K +K AVE F GVKV VN + K K K
Sbjct: 6 DIIKRPIITENTMNLIGQKKYTFEVDVKANKTEVKDAVEKIF-GVKVEKVNIMNYKGKFK 64
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELF 93
RVGRY+G+T++ KKAI+TLT DSK IELF
Sbjct: 65 RVGRYSGYTNRRKKAIVTLTPDSKEIELF 93
>gi|16077186|ref|NP_387999.1| ribosomal protein L23 [Bacillus
subtilis]
gi|1172996|sp|P42924|RL23_BACSU 50S ribosomal protein L23
gi|7428684|pir||A69697 ribosomal protein L23 - Bacillus subtilis
gi|786155|dbj|BAA08833.1| Ribosomal Protein L23 [Bacillus
subtilis]
gi|1165305|gb|AAC45958.1| L23 [Bacillus subtilis]
gi|2632385|emb|CAB11894.1| ribosomal protein L23 [Bacillus
subtilis subsp. subtilis str. 168]
Length = 95
Score = 85.9 bits (211), Expect = 1e-16
Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
DV+K+PVITE+S + KYTFEVD RA+K K AVE+ F GVKV VN + K K+K
Sbjct: 6 DVLKRPVITERSADLMTEEKYTFEVDVRANKTEAKDAVESIF-GVKVDKVNIMNYKGKSK 64
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELFAA 95
RVGRYTG TS+ +KAI+ LTADSK IE+F A
Sbjct: 65 RVGRYTGMTSRRRKAIVKLTADSKEIEIFEA 95
>gi|16804668|ref|NP_466153.1| ribosomal protein L23 [Listeria
monocytogenes EGD-e]
gi|25295419|pir||AF1403 ribosomal protein L23 [imported] -
Listeria monocytogenes (strain EGD-e)
gi|16412118|emb|CAD00708.1| ribosomal protein L23 [Listeria
monocytogenes]
Length = 94
Score = 85.9 bits (211), Expect = 1e-16
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M+ D+IK+PV+TE+S L+ KYTFEVDTRA K +K AVE FD VKVA VN + K
Sbjct: 1 MDARDIIKRPVVTEESTSILDDKKYTFEVDTRATKTQVKYAVEEIFD-VKVAKVNVMNYK 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KR+GRY G+T+K +KAI+T+TADSK I+ F
Sbjct: 60 GKLKRMGRYAGYTNKRRKAIVTVTADSKEIQFF 92
>gi|16801840|ref|NP_472108.1| ribosomal protein L23 [Listeria
innocua]
gi|25295418|pir||AE1779 ribosomal protein L23 [imported] -
Listeria innocua (strain Clip11262)
gi|16415315|emb|CAC98005.1| ribosomal protein L23 [Listeria
innocua]
Length = 94
Score = 85.9 bits (211), Expect = 1e-16
Identities = 53/93 (56%), Positives = 69/93 (73%), Gaps = 1/93 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M+ D+IK+PV+TE+S L+ KYTFEVDTRA K +K A+E FD VKVA VN + K
Sbjct: 1 MDARDIIKRPVVTEESTSILDDKKYTFEVDTRATKTQVKYAIEEIFD-VKVAKVNVMNYK 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KR+GRY G+T+K +KAI+T+TADSK I+ F
Sbjct: 60 GKLKRMGRYAGYTNKRRKAIVTVTADSKEIQFF 92
>gi|15925238|ref|NP_372772.1| 50S ribosomal protein L23
[Staphylococcus aureus subsp. aureus Mu50]
gi|15927828|ref|NP_375361.1| 50S ribosomal protein L23
[Staphylococcus aureus subsp. aureus N315]
gi|21283896|ref|NP_646984.1| 50S ribosomal protein L23
[Staphylococcus aureus subsp. aureus MW2]
gi|25295423|pir||C90022 50S ribosomal protein L23 [imported] -
Staphylococcus aureus (strain N315)
gi|13702048|dbj|BAB43340.1| 50S ribosomal protein L23
[Staphylococcus aureus subsp. aureus N315]
gi|14248021|dbj|BAB58410.1| 50S ribosomal protein L23
[Staphylococcus aureus subsp. aureus Mu50]
gi|21205338|dbj|BAB96032.1| 50S ribosomal protein L23
[Staphylococcus aureus subsp. aureus MW2]
Length = 91
Score = 82.0 bits (201), Expect = 2e-15
Identities = 52/93 (55%), Positives = 67/93 (71%), Gaps = 3/93 (3%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M D++K+PVITEKS A+ KYTF+VDTR +K +K AVE F+ VKVASVN + K
Sbjct: 1 MEARDILKRPVITEKSSEAMAEDKYTFDVDTRVNKTQVKMAVEEIFN-VKVASVNIMNYK 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
PK KR+GRY G+T+K +KAI+TL S I+LF
Sbjct: 60 PKKKRMGRYQGYTNKRRKAIVTLKEGS--IDLF 90
>gi|27468740|ref|NP_765377.1| 50S ribosomal protein L23
[Staphylococcus epidermidis ATCC 12228]
gi|27316288|gb|AAO05463.1|AE016750_68 50S ribosomal protein L23
[Staphylococcus epidermidis ATCC 12228]
Length = 91
Score = 81.3 bits (199), Expect = 3e-15
Identities = 53/93 (56%), Positives = 66/93 (69%), Gaps = 3/93 (3%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M DV+K+PVITEKS A+ KYTF+VDTRA+K +K AVE FD VKV SVN + K
Sbjct: 1 MEARDVLKRPVITEKSSEAMAEDKYTFDVDTRANKTQVKIAVEEIFD-VKVDSVNIINYK 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
PK KR+GRY G+T+K +KAI+ L S I+LF
Sbjct: 60 PKKKRMGRYQGYTNKRRKAIVKLKEGS--IDLF 90
>gi|23097576|ref|NP_691042.1| 50S ribosomal protein L23
[Oceanobacillus iheyensis HTE831]
gi|22775799|dbj|BAC12077.1| 50S ribosomal protein L23
[Oceanobacillus iheyensis HTE831]
Length = 95
Score = 80.1 bits (196), Expect = 7e-15
Identities = 51/94 (54%), Positives = 63/94 (66%), Gaps = 1/94 (1%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
+L DVIK+PVITE S + KYTFEV +A+K IK AVE F GVKV VNT+ K
Sbjct: 3 DLRDVIKRPVITEHSADLMAEKKYTFEVSPKANKTEIKDAVETIF-GVKVEKVNTMNQKG 61
Query: 62 KAKRVGRYTGFTSKTKKAIITLTADSKAIELFAA 95
K KR+GRY G+ KKA++ LTADSK ++ F A
Sbjct: 62 KFKRMGRYGGYRPNRKKAVVQLTADSKELDFFEA 95
>gi|23003723|ref|ZP_00047375.1| hypothetical protein
[Lactobacillus gasseri]
Length = 98
Score = 80.1 bits (196), Expect = 7e-15
Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M+ D+I +PV+TEKSM ++ KYTF+V A K ++ AVE FD VKV +VN + V+
Sbjct: 1 MDARDIILRPVVTEKSMNLMDDKKYTFDVLVSATKTQVRNAVEEIFD-VKVKNVNIMNVR 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KRVGRYTG T++ +KAI+TLT DS I++F
Sbjct: 60 GKEKRVGRYTGKTARRRKAIVTLTEDSNDIKIF 92
>gi|15896381|ref|NP_349730.1| Ribosomal protein L23 [Clostridium
acetobutylicum]
gi|25295424|pir||C97285 ribosomal protein L23 [imported] -
Clostridium acetobutylicum
gi|15026197|gb|AAK81070.1|AE007808_23 Ribosomal protein L23
[Clostridium acetobutylicum]
Length = 98
Score = 79.0 bits (193), Expect = 2e-14
Identities = 51/92 (55%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
N +D+I+KPVITEKSM + KYTF VD A+K+ IK+A+E F GVKV VNT +
Sbjct: 4 NSHDIIRKPVITEKSMAEMADKKYTFIVDPHANKVQIKKAIEEVF-GVKVEKVNTSNILG 62
Query: 62 KAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KRVG + G + KKAI+ LT DSKAIE F
Sbjct: 63 KTKRVGVHVGKRADYKKAIVKLTEDSKAIEFF 94
>gi|20808658|ref|NP_623829.1| Ribosomal protein L23
[Thermoanaerobacter tengcongensis]
gi|20517292|gb|AAM25433.1| Ribosomal protein L23
[Thermoanaerobacter tengcongensis]
Length = 96
Score = 78.6 bits (192), Expect = 2e-14
Identities = 51/93 (54%), Positives = 61/93 (64%), Gaps = 1/93 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M D+I +PVITEKSM + KYTF VD RA+K+ IK+AVE F GVKV V T+ K
Sbjct: 1 MEARDIIIRPVITEKSMNLMGDRKYTFIVDKRANKIEIKKAVEEIF-GVKVEKVYTMNYK 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KR+G+Y G T KKAI+ L DSK IE F
Sbjct: 60 GKPKRMGKYEGRTESYKKAIVKLAPDSKGIEFF 92
>gi|23042770|ref|ZP_00074129.1| hypothetical protein
[Trichodesmium erythraeum IMS101]
Length = 101
Score = 77.8 bits (190), Expect = 3e-14
Identities = 40/82 (48%), Positives = 58/82 (69%), Gaps = 1/82 (1%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
+L D+IK PV+TEK+ +E +YTF+VD RA K +IKQ +E F+ VKV +NT+ +
Sbjct: 7 DLVDIIKNPVVTEKATRLMELNQYTFDVDPRATKPMIKQVIEQIFE-VKVIGINTLNLPR 65
Query: 62 KAKRVGRYTGFTSKTKKAIITL 83
K +RVG+Y GF + K+AI+TL
Sbjct: 66 KKRRVGKYIGFKPRYKRAIVTL 87
>gi|23123365|ref|ZP_00105500.1| hypothetical protein
[Prochlorococcus marinus subsp. pastoris str. CCMP1378]
Length = 100
Score = 77.0 bits (188), Expect = 6e-14
Identities = 47/91 (51%), Positives = 64/91 (69%), Gaps = 2/91 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L D+I+KPVITEK+ AL+ +YTFEVD RA K IK A+EA FD VKV +NT+ +
Sbjct: 9 LADIIRKPVITEKATNALDLNQYTFEVDHRAAKPQIKAAIEALFD-VKVIGINTMNPPRR 67
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
+RVG+++G S+ KKAI+ L A+ I+LF
Sbjct: 68 TRRVGKFSGKRSQIKKAIVRL-AEGDKIQLF 97
>gi|23132191|ref|ZP_00113976.1| hypothetical protein
[Prochlorococcus marinus str. MIT 9313]
Length = 100
Score = 76.3 bits (186), Expect = 9e-14
Identities = 46/91 (50%), Positives = 64/91 (69%), Gaps = 2/91 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L DVI++P+ITEK+ ALE +YTFEVD RA K IK AVE FD V+V ++T+ +
Sbjct: 9 LADVIRRPLITEKATSALEQNQYTFEVDHRAAKPDIKAAVEQLFD-VRVVGISTMNPPRR 67
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
++RVGR+TG ++ KKAI+ L A+ I+LF
Sbjct: 68 SRRVGRFTGKRAQVKKAIVRL-AEGNTIQLF 97
>gi|23134456|ref|ZP_00116230.1| hypothetical protein
[Synechococcus sp. WH 8102]
Length = 100
Score = 72.4 bits (176), Expect = 1e-12
Identities = 43/91 (47%), Positives = 63/91 (68%), Gaps = 2/91 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L DVI++P+ITEK+ ALE +YTFEVD RA K IK A+E FD VKV ++T+ +
Sbjct: 9 LADVIRRPLITEKATRALEFNQYTFEVDHRAAKPDIKAAIEQLFD-VKVTGISTMNPPRR 67
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
+R+GR+ G ++ KKA++ L A+ +I+LF
Sbjct: 68 TRRMGRFAGKRAQVKKAVVRL-AEGNSIQLF 97
>gi|33241159|ref|NP_876101.1| Ribosomal protein L23
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33238689|gb|AAQ00754.1| Ribosomal protein L23 [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 102
Score = 72.0 bits (175), Expect = 2e-12
Identities = 44/91 (48%), Positives = 64/91 (69%), Gaps = 2/91 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L DVI++P+ITEK+ L+ +YTFEVD RA K IK AVE FD VKV ++T+ +
Sbjct: 9 LADVIRRPLITEKATKGLDINQYTFEVDHRAAKPDIKAAVEKLFD-VKVIGISTMNPPRR 67
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
++RVGR++G ++ KKAI+ L A+ +I+LF
Sbjct: 68 SRRVGRFSGKRAQVKKAIVRL-AEGNSIQLF 97
>gi|22973750|ref|ZP_00020261.1| hypothetical protein [Chloroflexus
aurantiacus]
Length = 94
Score = 71.6 bits (174), Expect = 2e-12
Identities = 43/92 (46%), Positives = 60/92 (64%), Gaps = 2/92 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YD++ +P+ITEK+ +E KYTFEV A K IK AVE F+ V+V V+T+ V+ K
Sbjct: 5 YDILIRPLITEKNTSLMELNKYTFEVHREATKPQIKHAVETIFN-VRVTKVHTMNVRGKL 63
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIELFAA 95
+R GR G+T KKAI+TL A+ IE+F +
Sbjct: 64 RRRGRSMGYTRDWKKAIVTL-AEGDRIEIFGS 94
>gi|15805342|ref|NP_294036.1| ribosomal protein L23 [Deinococcus
radiodurans]
gi|7473817|pir||A75534 ribosomal protein L23 - Deinococcus
radiodurans (strain R1)
gi|28948937|pdb|1NKW|R Chain R, Crystal Structure Of The Large
Ribosomal Subunit From Deinococcus Radiodurans
gi|6457987|gb|AAF09894.1|AE001892_5 ribosomal protein L23
[Deinococcus radiodurans]
Length = 95
Score = 71.2 bits (173), Expect = 3e-12
Identities = 43/97 (44%), Positives = 65/97 (66%), Gaps = 2/97 (2%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M+ YD+++ PVI+EK+ A+E G Y+F V +A K IK A++ AF GV+V ++T+ V
Sbjct: 1 MSHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAF-GVRVIGISTMNVP 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEA 97
K KRVGR+ G + KKAI+ L A+ ++IE A +A
Sbjct: 60 GKRKRVGRFIGQRNDRKKAIVRL-AEGQSIEALAGQA 95
>gi|23112029|ref|ZP_00097574.1| hypothetical protein
[Desulfitobacterium hafniense]
Length = 95
Score = 70.1 bits (170), Expect = 7e-12
Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
DV+K+PVI+EKS+ +E KY+F VDT A+K+ IK AVE F VKV V T+ V K K
Sbjct: 6 DVLKRPVISEKSVGLIEENKYSFWVDTAANKIEIKNAVEKMFK-VKVVDVRTINVDGKKK 64
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELFA 94
RVG++ G T+ KKAI+TL A + IE FA
Sbjct: 65 RVGKHVGRTADRKKAIVTLKAGDR-IEGFA 93
>gi|29726805|pdb|1NWX|R Chain R, Complex Of The Large Ribosomal
Subunit From Deinococcus Radiodurans With Abt-773
gi|29726836|pdb|1NWY|R Chain R, Complex Of The Large Ribosomal
Subunit From Deinococcus Radiodurans With Azithromycin
Length = 94
Score = 70.1 bits (170), Expect = 7e-12
Identities = 42/94 (44%), Positives = 63/94 (66%), Gaps = 2/94 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YD+++ PVI+EK+ A+E G Y+F V +A K IK A++ AF GV+V ++T+ V K
Sbjct: 3 YDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAF-GVRVIGISTMNVPGKR 61
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIELFAAEA 97
KRVGR+ G + KKAI+ L A+ ++IE A +A
Sbjct: 62 KRVGRFIGQRNDRKKAIVRL-AEGQSIEALAGQA 94
>gi|3122704|sp|O24691|RL23_SYNP6 50S ribosomal protein L23
gi|2446892|dbj|BAA22451.1| 50S ribosomal protein L23
[Synechococcus sp.]
Length = 100
Score = 70.1 bits (170), Expect = 8e-12
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L D+I++P+ITEK+ LE +YTFEVD RA K IK A+EA F VKV ++T K
Sbjct: 9 LADIIRRPIITEKATRLLENNQYTFEVDPRASKPEIKAAIEALFQ-VKVVGLSTQLPPRK 67
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
A+RVGR+ G ++ K+A+ L AD +I LF
Sbjct: 68 ARRVGRFAGHRAQVKRAVARL-ADGDSITLF 97
>gi|15644246|ref|NP_229298.1| ribosomal protein L23 [Thermotoga
maritima]
gi|585873|sp|P38512|RL23_THEMA 50S ribosomal protein L23
gi|481931|pir||S40190 ribosomal protein L23 - Thermotoga maritima
(strain MSB8)
gi|437925|emb|CAA79779.1| ribosomal protein L23 [Thermotoga
maritima]
gi|4982062|gb|AAD36564.1|AE001798_29 ribosomal protein L23
[Thermotoga maritima]
Length = 100
Score = 68.9 bits (167), Expect = 2e-11
Identities = 40/83 (48%), Positives = 59/83 (70%), Gaps = 1/83 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
++L+DV+ +P+ITEK+++ E KY FEV+ A+K L+K+AVE F+ VKV VN + +K
Sbjct: 6 LSLHDVLIRPIITEKALILREQRKYVFEVNPLANKNLVKEAVEKLFN-VKVEKVNILNMK 64
Query: 61 PKAKRVGRYTGFTSKTKKAIITL 83
PK KR G + G T KKA++TL
Sbjct: 65 PKPKRRGIFEGKTRSWKKAVVTL 87
>gi|28377834|ref|NP_784726.1| ribosomal protein L23 [Lactobacillus
plantarum WCFS1]
gi|28270667|emb|CAD63573.1| ribosomal protein L23 [Lactobacillus
plantarum WCFS1]
Length = 97
Score = 68.9 bits (167), Expect = 2e-11
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M DVI +PV+TE SM L+ +YTF+V+ +A K +K+A+E FD V
Sbjct: 1 MEARDVILRPVVTESSMADLDDKRYTFDVNVQATKTQVKKAIEEIFDVKVVKVNVMNVKG 60
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KR GRY G+T K +KAI+TL++DS I+LF
Sbjct: 61 -KLKRQGRYAGYTKKRRKAIVTLSSDSNEIKLF 92
>gi|16329939|ref|NP_440667.1| 50S ribosomal protein L23
[Synechocystis sp. PCC 6803]
gi|2500305|sp|P73318|RL23_SYNY3 50S ribosomal protein L23
gi|7428688|pir||S77500 ribosomal protein L23 - Synechocystis sp.
(strain PCC 6803)
gi|1652425|dbj|BAA17347.1| 50S ribosomal protein L23
[Synechocystis sp. PCC 6803]
Length = 101
Score = 67.8 bits (164), Expect = 3e-11
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L D+I KP++TEK+ + LE KY F+V A K IK A+E FD VKV VNT + +
Sbjct: 10 LADLIIKPIVTEKATLQLEDNKYVFDVRPEATKPEIKAAIELLFD-VKVTGVNTARMPRR 68
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
KRVGR+ GF ++ K+A++TL + +I+LF
Sbjct: 69 KKRVGRFMGFKAQVKRAVVTLK-EGDSIQLF 98
>gi|17231705|ref|NP_488253.1| 50S ribosomal protein L23 [Nostoc
sp. PCC 7120]
gi|25295429|pir||AF2332 50S ribosomal protein L23 [imported] -
Nostoc sp. (strain PCC 7120)
gi|17133348|dbj|BAB75912.1| 50S ribosomal protein L23 [Nostoc sp.
PCC 7120]
Length = 104
Score = 67.8 bits (164), Expect = 3e-11
Identities = 37/82 (45%), Positives = 55/82 (66%), Gaps = 1/82 (1%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
NL D++++P++TEK+ + +E KYTFEV +A K I+ A+E F VKV VNT
Sbjct: 8 NLPDLVRRPILTEKATIMMEQNKYTFEVTPKASKPQIRAAIEDLFQ-VKVVKVNTALPPR 66
Query: 62 KAKRVGRYTGFTSKTKKAIITL 83
+ KRVG++ GF + KKAI+T+
Sbjct: 67 RKKRVGKFIGFKPQYKKAIVTI 88
>gi|23022269|ref|ZP_00061885.1| hypothetical protein [Clostridium
thermocellum ATCC 27405]
Length = 117
Score = 67.4 bits (163), Expect = 4e-11
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D+IK+P ITEKS + GKYTF VD +A K I+QAVE F VKV VNTV K K K
Sbjct: 6 DIIKRPYITEKSNAEIANGKYTFIVDAKATKTEIRQAVEKLFQ-VKVLKVNTVNYKGKRK 64
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAI 90
R+G + GF KKAI+ + + K +
Sbjct: 65 RLGVHEGFRPDWKKAIVKIDTEPKPV 90
>gi|12751546|ref|NP_043615.2| ribosomal protein L23 [Odontella
sinensis]
gi|1350633|sp|P49559|RK23_ODOSI Chloroplast 50S ribosomal protein
L23
gi|7428689|pir||S78274 ribosomal protein L23 - Odontella sinensis
chloroplast
gi|13620210|emb|CAA91647.2| 50S ribosomal protein L23 [Odontella
sinensis]
Length = 102
Score = 67.0 bits (162), Expect = 6e-11
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
++IK P+IT+K+ LE +Y+F V+ + K+ IK A+E F+ VKV VNT + K K
Sbjct: 13 NIIKYPIITDKATRLLENNQYSFIVNPYSDKITIKAAIEYLFN-VKVIKVNTCHLPKKKK 71
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELFA 94
RVG+Y G+ S KKAI+TL+ + I LFA
Sbjct: 72 RVGKYLGWKSHYKKAIVTLSQGDR-INLFA 100
>gi|18311385|ref|NP_563319.1| 50S ribosomal protein L23
[Clostridium perfringens]
gi|18146069|dbj|BAB82109.1| 50S ribosomal protein L23
[Clostridium perfringens str. 13]
Length = 97
Score = 67.0 bits (162), Expect = 7e-11
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
+D+I+KPVITEKSM A+ KYTF V A+K+ IK+AVE F+ VKVA V T+ + K
Sbjct: 6 HDIIRKPVITEKSMAAMAENKYTFIVHMAANKVQIKRAVEEVFN-VKVADVKTMRFEGKT 64
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIELF 93
KRVG + G + KKA+ITL A+ +IE F
Sbjct: 65 KRVGVHIGKRADFKKAVITL-AEGSSIEFF 93
>gi|22297627|ref|NP_680874.1| 50S ribosomal protein L23
[Thermosynechococcus elongatus BP-1]
gi|22293804|dbj|BAC07636.1| 50S ribosomal protein L23
[Thermosynechococcus elongatus BP-1]
Length = 100
Score = 65.9 bits (159), Expect = 1e-10
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L D+IK+P+ITEK+ V LE +YTF+VD RA K IK A+E F+ VKV +VNT + PK
Sbjct: 9 LADLIKRPIITEKATVLLENNQYTFDVDRRATKPQIKAAIEELFN-VKVTAVNTYHLPPK 67
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAI 90
+RVGR+ G + K+AI+TL DSK +
Sbjct: 68 ERRVGRFVGRRPRYKRAIVTLAPDSKIV 95
>gi|21398072|ref|NP_654057.1| Ribosomal_L23, Ribosomal protein L23
[Bacillus anthracis A2012]
Length = 69
Score = 65.1 bits (157), Expect = 3e-10
Identities = 39/67 (58%), Positives = 51/67 (75%), Gaps = 1/67 (1%)
Query: 27 FEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAKRVGRYTGFTSKTKKAIITLTAD 86
F+V +++K +K A+EA F GVKV VN + KPKAKRVGR+ GFTS+ +KAI+ LTAD
Sbjct: 1 FDVYLKSNKTEVKDALEAIF-GVKVEKVNIMNYKPKAKRVGRHAGFTSRRRKAIVKLTAD 59
Query: 87 SKAIELF 93
SK IE+F
Sbjct: 60 SKEIEIF 66
>gi|11466369|ref|NP_038372.1| ribosomal protein L23 [Mesostigma
viride]
gi|14548226|sp|Q9MUT8|RK23_MESVI Chloroplast 50S ribosomal
protein L23
gi|7259512|gb|AAF43813.1|AF166114_25 ribosomal protein L23
[Mesostigma viride]
Length = 92
Score = 64.7 bits (156), Expect = 3e-10
Identities = 39/86 (45%), Positives = 56/86 (64%), Gaps = 2/86 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
+ D++K PV+TEK+ LE +YTF+VD +A+K+ IK +E F+ VKV SVNT K
Sbjct: 1 MIDIVKYPVLTEKATRLLENNQYTFDVDPKANKITIKALIEDFFN-VKVLSVNTHRPPRK 59
Query: 63 AKRVGRYTGFTSKTKKAIITL-TADS 87
+R+GR G+ K+ I+TL T DS
Sbjct: 60 KRRIGRSEGYRPNYKRVIVTLKTGDS 85
>gi|23124124|ref|ZP_00106135.1| hypothetical protein [Nostoc
punctiforme]
Length = 104
Score = 63.9 bits (154), Expect = 5e-10
Identities = 35/82 (42%), Positives = 55/82 (66%), Gaps = 1/82 (1%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
+L D++++P++TEK+ + +E KYTFEV +A K IK A+E F VKV VNT
Sbjct: 8 DLADLVRRPIVTEKATILMEQNKYTFEVIPKASKPEIKAAIEDLFQ-VKVVKVNTNLPPR 66
Query: 62 KAKRVGRYTGFTSKTKKAIITL 83
K +RVG++ G+ + K+AI+T+
Sbjct: 67 KKRRVGKFIGYKPQYKRAIVTV 88
>gi|23018360|ref|ZP_00058077.1| hypothetical protein [Thermobifida
fusca]
Length = 96
Score = 63.5 bits (153), Expect = 7e-10
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D+I KPVI+EKS L+ KYTF V A+K IK AVE FD VKV SVNT+ K K K
Sbjct: 8 DIIIKPVISEKSYGLLDQNKYTFLVHPEANKTQIKMAVEQIFD-VKVTSVNTINRKGKRK 66
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELF 93
R G TK+AI++L D I++F
Sbjct: 67 RTRFGYGKRPDTKRAIVSLK-DGDRIDIF 94
>gi|3122700|sp|O06046|RL23_MYCBO 50S RIBOSOMAL PROTEIN L23
gi|2113868|emb|CAA73674.1| rplW [Mycobacterium bovis BCG]
Length = 100
Score = 63.2 bits (152), Expect = 9e-10
Identities = 45/93 (48%), Positives = 55/93 (58%), Gaps = 1/93 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D+I PVI+EKS L+ YTF V ++K IK AVE F GVKVASVNT + K K
Sbjct: 9 DIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIF-GVKVASVNTANRQGKRK 67
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELFAAEA 97
R G TK+AI+TL S+ I+LF A A
Sbjct: 68 RTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
>gi|33357420|pdb|1N88|A Chain A, Nmr Structure Of The Ribosomal
Protein L23 From Thermus Thermophilus.
gi|5917641|gb|AAD55971.1|AF094532_1 ribosomal protein L23
[Thermus thermophilus]
Length = 96
Score = 62.8 bits (151), Expect = 1e-09
Identities = 42/85 (49%), Positives = 51/85 (59%), Gaps = 1/85 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI PV++EK+ GKYTF V +A K IK AVE AF VKV VNT+ V+ K
Sbjct: 5 YDVILAPVLSEKAYAGFAEGKYTFWVHPKATKTEIKNAVETAFK-VKVVKVNTLHVRGKK 63
Query: 64 KRVGRYTGFTSKTKKAIITLTADSK 88
KR+GRY G KKAI+ + K
Sbjct: 64 KRLGRYLGKRPDRKKAIVQVAPGQK 88
>gi|7674252|sp|Q9ZI48|RL23_AQUPY 50S ribosomal protein L23
gi|4165867|gb|AAD08787.1| ribosomal protein L23 [Aquifex
pyrophilus]
Length = 109
Score = 62.4 bits (150), Expect = 1e-09
Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 4 YDVIKKPVITEKSMVALE-AGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
++++ +P+ITEKS +E KYTFEV A K IK+AVE F+ VKV VNT+ VKPK
Sbjct: 7 WEILIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKEAVEKLFN-VKVKKVNTMIVKPK 65
Query: 63 AKRVG---RYTGFTSKTKKAIITL 83
KRV R G T K KKAI+TL
Sbjct: 66 KKRVWERFRQYGTTKKWKKAIVTL 89
>gi|15829057|ref|NP_326417.1| 50S RIBOSOMAL PROTEIN L23
[Mycoplasma pulmonis]
gi|25394580|pir||B90585 50S ribosomal protein L23 [imported] -
Mycoplasma pulmonis (strain UAB CTIP)
gi|14090001|emb|CAC13759.1| 50S RIBOSOMAL PROTEIN L23 [Mycoplasma
pulmonis]
Length = 154
Score = 62.4 bits (150), Expect = 1e-09
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M L +VIK P++TEK+ +E G YTF V + HK+ IK+AVE F+ VKV V+ + +
Sbjct: 1 MLLSEVIKYPILTEKTYGLMEKGIYTFAVSPKTHKIEIKKAVEFIFN-VKVEKVSIINID 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KRVGR+ GFT+ KKA + L A +I LF
Sbjct: 60 KKPKRVGRFNGFTNSVKKAYVYL-AQGNSINLF 91
>gi|11465778|ref|NP_053922.1| ribosomal protein L23 [Porphyra
purpurea]
gi|1710461|sp|P51312|RK23_PORPU CHLOROPLAST 50S RIBOSOMAL PROTEIN
L23
gi|2147053|pir||S73233 ribosomal protein L23 - red alga (Porphyra
purpurea) chloroplast
gi|1276778|gb|AAC08198.1| 50S ribosomal protein L23 [Porphyra
purpurea]
Length = 110
Score = 62.0 bits (149), Expect = 2e-09
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
+L D++K P+IT+K+ LE +Y F VD A K+ IK A++ F+ V+V VNT
Sbjct: 18 DLLDLVKYPIITDKTTKLLEENQYCFAVDPNATKINIKAAIQYIFN-VQVTGVNTCHPPK 76
Query: 62 KAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K + +GR+ G KKAIITL A +I LF
Sbjct: 77 KKRSIGRFIGKRPHYKKAIITL-ASKDSINLF 107
>gi|15828000|ref|NP_302263.1| 50S ribosomal protein L23
[Mycobacterium leprae]
gi|3122712|sp|O32983|RL23_MYCLE 50S ribosomal protein L23
gi|11276850|pir||T45366 ribosomal protein L23 [imported] -
Mycobacterium leprae
gi|2370267|emb|CAB11464.1| ribosomal protein L23 [Mycobacterium
leprae]
gi|13093553|emb|CAC30815.1| 50S ribosomal protein L23
[Mycobacterium leprae]
Length = 100
Score = 61.6 bits (148), Expect = 3e-09
Identities = 44/93 (47%), Positives = 54/93 (57%), Gaps = 1/93 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D+I PVI+EKS L+ YTF V ++K IK A+E F VKVASVNT K K K
Sbjct: 9 DIILAPVISEKSYGLLDDNVYTFVVHPDSNKTQIKIAIEKIFS-VKVASVNTSNRKGKCK 67
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELFAAEA 97
R G TK+AI+TL SK+I+LF A
Sbjct: 68 RTRTGFGRRKNTKRAIVTLAPGSKSIDLFGTPA 100
>gi|132803|sp|P10140|RL23_MYCCA 50S RIBOSOMAL PROTEIN L23
gi|71296|pir||R5YM23 ribosomal protein L23 - Mycoplasma
capricolum
gi|44211|emb|CAA29706.1| unnamed protein product [Mycoplasma
capricolum]
Length = 94
Score = 61.2 bits (147), Expect = 3e-09
Identities = 41/88 (46%), Positives = 55/88 (61%), Gaps = 1/88 (1%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVK 60
M++ +V+KKPV+TEKS + YTF VD +A+K+ IK+ E F+ VKV SV T+
Sbjct: 1 MHITEVLKKPVLTEKSFAGHKDNVYTFLVDKKANKVQIKKTFEEIFE-VKVESVRTINYD 59
Query: 61 PKAKRVGRYTGFTSKTKKAIITLTADSK 88
K KR+G+Y G KKAIITL K
Sbjct: 60 AKEKRLGKYVGKKPSYKKAIITLKEGQK 87
>gi|29831471|ref|NP_826105.1| putative ribosomal protein L23
[Streptomyces avermitilis MA-4680]
gi|29608586|dbj|BAC72640.1| putative ribosomal protein L23
[Streptomyces avermitilis MA-4680]
Length = 138
Score = 60.8 bits (146), Expect = 4e-09
Identities = 43/89 (48%), Positives = 57/89 (63%), Gaps = 2/89 (2%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
DV+ KPV++EKS L+ GKYTF V A+K IKQAV+A F VKV VNT+ + K K
Sbjct: 48 DVLVKPVVSEKSYALLDEGKYTFIVAPGANKTQIKQAVQAVFS-VKVTGVNTINRQGKRK 106
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELF 93
R G + TK+AI+TL A+ I++F
Sbjct: 107 RTKSGFGKRADTKRAIVTL-AEGDRIDIF 134
>gi|15607843|ref|NP_215217.1| rplW [Mycobacterium tuberculosis
H37Rv]
gi|15840110|ref|NP_335147.1| ribosomal protein L23 [Mycobacterium
tuberculosis CDC1551]
gi|31791888|ref|NP_854381.1| PROBABLE 50S RIBOSOMAL PROTEIN L23
RPLW [Mycobacterium bovis subsp. bovis AF2122/97]
gi|6225982|sp|P95051|RL23_MYCTU 50S ribosomal protein L23
gi|7441014|pir||B70642 probable ribosomal protein L23 rplW -
Mycobacterium tuberculosis (strain H37RV)
gi|1806171|emb|CAB06466.1| rplW [Mycobacterium tuberculosis H37Rv]
gi|13880260|gb|AAK44961.1| ribosomal protein L23 [Mycobacterium
tuberculosis CDC1551]
gi|31617475|emb|CAD93585.1| PROBABLE 50S RIBOSOMAL PROTEIN L23 RPLW
[Mycobacterium bovis subsp. bovis AF2122/97]
Length = 100
Score = 60.5 bits (145), Expect = 6e-09
Identities = 44/93 (47%), Positives = 54/93 (57%), Gaps = 1/93 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D+I PVI+EKS L+ YTF V ++K IK AVE F VKVASVNT + K K
Sbjct: 9 DIILAPVISEKSYGLLDDNVYTFLVRPDSNKTQIKIAVEKIF-AVKVASVNTANRQGKRK 67
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELFAAEA 97
R G TK+AI+TL S+ I+LF A A
Sbjct: 68 RTRTGYGKRKSTKRAIVTLAPGSRPIDLFGAPA 100
>gi|28493519|ref|NP_787680.1| 50S ribosomal protein L23 [Tropheryma
whipplei str. Twist]
gi|28572369|ref|NP_789149.1| 50s ribosomal protein L23 [Tropheryma
whipplei TW08/27]
gi|28410500|emb|CAD66886.1| 50s ribosomal protein L23 [Tropheryma
whipplei TW08/27]
gi|28476561|gb|AAO44649.1| 50S ribosomal protein L23 [Tropheryma
whipplei str. Twist]
Length = 103
Score = 58.9 bits (141), Expect = 1e-08
Identities = 41/92 (44%), Positives = 58/92 (62%), Gaps = 3/92 (3%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
+++DVI P I+EK+ LE KYTF VD +++K IK AVE F GVKV+SVNT+ +
Sbjct: 14 HVHDVILGPAISEKTYGLLEDSKYTFLVDPKSNKTEIKLAVEKIF-GVKVSSVNTMNRRG 72
Query: 62 KAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K +R + G K+A++TL S I+LF
Sbjct: 73 KLQRTRKGIGRRKDRKRAVVTLK--SGTIDLF 102
>gi|23306475|gb|AAM08937.1| 50S ribosomal protein L23 [Mycoplasma
hominis]
Length = 143
Score = 58.9 bits (141), Expect = 2e-08
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 1 MNLYDVIKKPVITEKSMVALEAGK-YTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTV 59
MN+ +VIK P++TEKS ++ E YTF VD R +K+ +K+AVE FD VKV VN
Sbjct: 1 MNINEVIKYPLLTEKSELSRENKNVYTFVVDKRTNKIEVKKAVEFIFD-VKVLKVNITNY 59
Query: 60 KPKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAE 96
K ++GR++GF + KKA + L DSK I LFA E
Sbjct: 60 DKKPAKLGRFSGFKNSVKKATVYLAKDSKII-LFAEE 95
>gi|19551748|ref|NP_599750.1| ribosomal protein L23
[Corynebacterium glutamicum ATCC 13032]
gi|21323274|dbj|BAB97902.1| Ribosomal protein L23
[Corynebacterium glutamicum ATCC 13032]
Length = 101
Score = 58.5 bits (140), Expect = 2e-08
Identities = 43/92 (46%), Positives = 54/92 (57%), Gaps = 1/92 (1%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
N D+I PV++EKS +E YTF V T A+K IK A+E F GVKVASVNTV
Sbjct: 6 NPRDIIIAPVVSEKSYGLMEQNVYTFFVSTDANKTQIKIAIEEIF-GVKVASVNTVNRAG 64
Query: 62 KAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KR G TK+A +TL S +I++F
Sbjct: 65 KRKRSRTGFGTRKATKRAYVTLREGSDSIDIF 96
>gi|25027080|ref|NP_737134.1| putative 50S ribosomal protein L23
[Corynebacterium efficiens YS-314]
gi|23492360|dbj|BAC17334.1| putative 50S ribosomal protein L23
[Corynebacterium efficiens YS-314]
Length = 101
Score = 58.5 bits (140), Expect = 2e-08
Identities = 43/92 (46%), Positives = 54/92 (57%), Gaps = 1/92 (1%)
Query: 2 NLYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
N D+I PV++EKS +E YTF V A+K IK AVE F GVKVASVNTV +
Sbjct: 6 NPRDIILAPVVSEKSYGLMEQNVYTFFVARDANKTQIKIAVEEIF-GVKVASVNTVNREG 64
Query: 62 KAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K KR G TK+A +TL S +I++F
Sbjct: 65 KRKRSRSGFGVRKATKRAYVTLREGSDSIDIF 96
>gi|11467719|ref|NP_050771.1| ribosomal protein L23 [Guillardia
theta]
gi|3914645|sp|O46896|RK23_GUITH CHLOROPLAST 50S RIBOSOMAL PROTEIN
L23
gi|3603044|gb|AAC35705.1| ribosomal protein L23 [Guillardia
theta]
Length = 95
Score = 58.5 bits (140), Expect = 2e-08
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L D++K P+IT+K+ LE +YTF A K IK A+E F+ VKV S+NT + K
Sbjct: 4 LIDLVKYPLITDKATRLLELNQYTFLTSRVATKTDIKNAIEFLFN-VKVISINTCLLPLK 62
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAIELFA 94
KR+G++ G + KKA++TL ++ I LF+
Sbjct: 63 RKRLGKFVGSKPRYKKAVVTLEKNN-TINLFS 93
>gi|15604503|ref|NP_221021.1| 50S RIBOSOMAL PROTEIN L23 (rplW)
[Rickettsia prowazekii]
gi|6225983|sp|Q9ZCQ7|RL23_RICPR 50S ribosomal protein L23
gi|7441005|pir||G71671 ribosomal protein L23 - Rickettsia
prowazekii
gi|3861197|emb|CAA15097.1| 50S RIBOSOMAL PROTEIN L23 (rplW)
[Rickettsia prowazekii]
Length = 98
Score = 58.5 bits (140), Expect = 2e-08
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YD+I+KP+ITEK+ E KYTF V+ A KL +K+A+EA F VKV VN + +K K
Sbjct: 7 YDLIRKPIITEKTTSISEQNKYTFYVNKFAKKLSLKRAIEAIFK-VKVKKVNILNIKGKK 65
Query: 64 KRVGRYTGFTSKTKKAIITLTAD 86
KR G KKAI+TL D
Sbjct: 66 KRFKGIIGTQINRKKAIVTLEKD 88
>gi|19704964|ref|NP_602459.1| LSU ribosomal protein L23P
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19712866|gb|AAL93758.1| LSU ribosomal protein L23P
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 95
Score = 57.8 bits (138), Expect = 3e-08
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 1 MNLYDVIKKPVITEKS-MVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTV 59
MN+YD+IKKPV+TEK+ ++ E KYTFEV +A+K+ IK+AVEA F+ VKV V T+
Sbjct: 1 MNVYDIIKKPVVTEKTELLRKEYNKYTFEVHPKANKIEIKKAVEAIFN-VKVEDVATINK 59
Query: 60 KPKAKRVGRYTGFTSKTKKAIITLTADS 87
KP KR G T KKAI+ L ++
Sbjct: 60 KPITKRHGMRLYKTQAKKKAIVKLAKEN 87
>gi|22711956|ref|NP_683844.1| ribosomal protein L23
[Chaetosphaeridium globosum]
gi|22416960|gb|AAM96560.1| ribosomal protein L23
[Chaetosphaeridium globosum]
Length = 91
Score = 57.8 bits (138), Expect = 4e-08
Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
+ D +K P++TEKS+ L+ +YTF+V++ +K K+ +E F VKV S+N+ K
Sbjct: 1 MIDKVKSPLLTEKSIRLLQKNQYTFQVNSDVNKTEFKKWIEIFFK-VKVMSINSCRPPRK 59
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSKAIELFA 94
KR+G +G+T + KK I+TL + +I LF+
Sbjct: 60 KKRIGLISGYTVRYKKIIVTLKS-GDSIPLFS 90
>gi|15892927|ref|NP_360641.1| 50S ribosomal protein L23
[Rickettsia conorii]
gi|25295425|pir||D97825 50S ribosomal protein L23 [imported] -
Rickettsia conorii (strain Malish 7)
gi|15620119|gb|AAL03542.1| 50S ribosomal protein L23 [Rickettsia
conorii]
Length = 98
Score = 57.4 bits (137), Expect = 4e-08
Identities = 40/83 (48%), Positives = 49/83 (58%), Gaps = 1/83 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YD+I+KP+ITEK+ E KY F VD A KL +K+A+E F VKV VN + VK K
Sbjct: 7 YDLIRKPIITEKTTTLSEQNKYAFYVDKFAKKLTLKKAIEEIFK-VKVKKVNILNVKGKK 65
Query: 64 KRVGRYTGFTSKTKKAIITLTAD 86
KR G KKAI+TL D
Sbjct: 66 KRFKGIIGTQINRKKAIVTLEKD 88
>gi|17987042|ref|NP_539676.1| LSU ribosomal protein L23P [Brucella
melitensis]
gi|25295421|pir||AI3346 LSU ribosomal protein L23P [imported] -
Brucella melitensis (strain 16M)
gi|17982698|gb|AAL51940.1| LSU ribosomal protein L23P [Brucella
melitensis 16M]
Length = 97
Score = 57.0 bits (136), Expect = 6e-08
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI PVITEKS + E + F V +A K IK AVEA F GVKV +VNT K K
Sbjct: 7 YDVIVSPVITEKSTMVSEHNQVVFNVARKATKPEIKAAVEALF-GVKVTAVNTAVCKGKV 65
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIEL 92
KR G S KKAI+TL A+ ++I++
Sbjct: 66 KRFRGLVGRQSDVKKAIVTL-AEGQSIDV 93
>gi|15605618|ref|NP_212991.1| ribosomal protein L23 [Aquifex
aeolicus]
gi|6094036|sp|O66433|RL23_AQUAE 50S ribosomal protein L23
gi|7428685|pir||F70300 ribosomal protein L23 - Aquifex aeolicus
gi|2982771|gb|AAC06397.1| ribosomal protein L23 [Aquifex aeolicus
VF5]
Length = 103
Score = 57.0 bits (136), Expect = 6e-08
Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 4 YDVIKKPVITEKSMVALE-AGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
+++I +P+ITEKS +E KYTFEV A K IK AVE F+ VKV VNT+ VKPK
Sbjct: 7 WEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYAVEKLFN-VKVKKVNTMIVKPK 65
Query: 63 AKRVG---RYTGFTSKTKKAIITLTADSK 88
KRV R G T K KKAI+TL K
Sbjct: 66 KKRVWNKFRQYGTTKKWKKAIVTLEKGHK 94
>gi|27886200|gb|EAA23490.1| LSU ribosomal protein L23P
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 95
Score = 57.0 bits (136), Expect = 6e-08
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 1 MNLYDVIKKPVITEKS-MVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTV 59
MN+YD+IKKPV+TEK+ ++ E KYTFEV +A+K+ IK+A+E F+ VKV V T+
Sbjct: 1 MNVYDIIKKPVVTEKTELLRKEYNKYTFEVHPKANKIEIKKAIETIFN-VKVEDVATINK 59
Query: 60 KPKAKRVGRYTGFTSKTKKAIITLTADS 87
KP KR G T KKAI+ L ++
Sbjct: 60 KPITKRHGMRLYKTQAKKKAIVKLAKEN 87
>gi|13470553|ref|NP_102122.1| 50S ribosomal protein L23
[Mesorhizobium loti]
gi|14021295|dbj|BAB47908.1| 50S ribosomal protein L23
[Mesorhizobium loti]
Length = 97
Score = 57.0 bits (136), Expect = 6e-08
Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI P ITEKS +A E + F V +A K IK AVEA F GVKV +VNT+ K K
Sbjct: 7 YDVIVSPAITEKSTMASEQNQVVFNVAKKASKPEIKAAVEALF-GVKVMAVNTLVRKGKI 65
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIEL 92
KR G S KKAI+TL AD ++I++
Sbjct: 66 KRFRGTIGRQSDVKKAIVTL-ADGQSIDV 93
>gi|28262756|gb|EAA26260.1| 50S ribosomal protein L23 [Rickettsia
sibirica]
Length = 98
Score = 57.0 bits (136), Expect = 6e-08
Identities = 40/83 (48%), Positives = 49/83 (58%), Gaps = 1/83 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YD+I+KP+ITEK+ E KY F VD A KL +K+A+E F VKV VN + VK K
Sbjct: 7 YDLIRKPIITEKTTTLSEQNKYAFYVDKFAKKLTLKKAIEEIFK-VKVKKVNILYVKGKK 65
Query: 64 KRVGRYTGFTSKTKKAIITLTAD 86
KR G KKAI+TL D
Sbjct: 66 KRFKGIIGTQINRKKAIVTLEKD 88
>gi|7524699|ref|NP_042453.1| ribosomal protein L23 [Pinus
thunbergii]
gi|1710460|sp|P52772|RK23_PINTH CHLOROPLAST 50S RIBOSOMAL PROTEIN
L23
gi|7441010|pir||T07532 ribosomal protein L23 - Japanese black
pine chloroplast
gi|1262693|dbj|BAA04408.1| ribosomal protein L23 [Pinus
thunbergii]
Length = 91
Score = 57.0 bits (136), Expect = 7e-08
Identities = 38/93 (40%), Positives = 56/93 (59%), Gaps = 4/93 (4%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D +K PV+TEKS+ LE +YTF VD++++K IK +E FD VKV ++N+ + K
Sbjct: 2 DEVKYPVLTEKSIRLLERNQYTFNVDSQSNKTKIKNWIENFFD-VKVIAMNSYRLPEKGG 60
Query: 65 RVGRYTGFTSKTKKAIITL-TADSKAIELFAAE 96
+ G + K+ IITL T DS I LF+ +
Sbjct: 61 KRVSMIGHPIRCKRVIITLRTGDS--IPLFSEQ 91
>gi|28202215|ref|NP_777456.1| ribosomal protein L23 [Anthoceros
formosae]
gi|27807917|dbj|BAC55392.1| ribosomal protein L23 [Anthoceros
formosae]
gi|27808077|dbj|BAC55493.1| ribosomal protein L23 [Anthoceros
formosae]
Length = 91
Score = 57.0 bits (136), Expect = 7e-08
Identities = 33/82 (40%), Positives = 51/82 (61%), Gaps = 1/82 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D +K PV+TEK++ LE +Y F+VD +A K IKQ ++ F VKV ++N+ K K
Sbjct: 2 DKVKYPVLTEKTIRLLERNQYCFDVDLKASKTEIKQWIQDFFK-VKVVAMNSHRPPKKKK 60
Query: 65 RVGRYTGFTSKTKKAIITLTAD 86
R+G G+ + K+ IITL ++
Sbjct: 61 RIGPVLGYPVRYKRMIITLESN 82
>gi|6093984|sp|O62961|RK23_PICAB CHLOROPLAST 50S RIBOSOMAL PROTEIN
L23
gi|7441008|pir||T11817 ribosomal protein L23 - Norway spruce
chloroplast
gi|2959593|gb|AAC95507.1| ribosomal protein L23 [Picea abies]
Length = 91
Score = 56.6 bits (135), Expect = 8e-08
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D +K PV+TEKS+ LE +YTF VD++ +K +K +E FD VKV ++N+ + K
Sbjct: 2 DEVKYPVLTEKSIRLLERNQYTFNVDSQLNKTKMKIWIEHFFD-VKVIAMNSYRLPEKGG 60
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELFAAE 96
+ G G + K+ IITL +I LF+ +
Sbjct: 61 KGGSMIGHPIRCKRMIITLKP-GDSIPLFSEQ 91
>gi|11467777|ref|NP_050828.1| ribosomal protein L23 [Nephroselmis
olivacea]
gi|17433260|sp|Q9TL17|RK23_NEPOL Chloroplast 50S ribosomal
protein L23
gi|5880706|gb|AAD54799.1|AF137379_22 ribosomal protein L23
[Nephroselmis olivacea]
Length = 92
Score = 56.6 bits (135), Expect = 8e-08
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
+ D++K+PVITEK+ LE +YTF+V+ K IK +E AF V+V SVNT +
Sbjct: 2 IIDLVKRPVITEKATRILEKNQYTFDVELSLTKPKIKALIEKAFK-VEVVSVNTHRPPRR 60
Query: 63 AKRVGRYTGFTSKTKKAIITL 83
+R+G G+ + K+AIITL
Sbjct: 61 KRRLGTTQGYLPRYKRAIITL 81
>gi|29565656|ref|NP_817237.1| ribosomal protein L23 [Pinus
koraiensis]
gi|29469755|gb|AAO74083.1| ribosomal protein L23 [Pinus
koraiensis]
Length = 91
Score = 56.2 bits (134), Expect = 1e-07
Identities = 38/93 (40%), Positives = 55/93 (58%), Gaps = 4/93 (4%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D +K PV+TEKS+ LE +YTF VD +++K IK +E FD VKV ++N+ + K
Sbjct: 2 DEVKYPVLTEKSIRLLERNQYTFNVDLQSNKTKIKNWIENFFD-VKVIAMNSYRLPEKGG 60
Query: 65 RVGRYTGFTSKTKKAIITL-TADSKAIELFAAE 96
+ G + K+ IITL T DS I LF+ +
Sbjct: 61 KRGSMIVHPIRCKRMIITLRTGDS--IPLFSEQ 91
>gi|23336503|ref|ZP_00121717.1| hypothetical protein
[Bifidobacterium longum DJO10A]
gi|23466132|ref|NP_696735.1| 50S ribosomal protein L23
[Bifidobacterium longum NCC2705]
gi|23326868|gb|AAN25371.1|AE014793_6 50S ribosomal protein L23
[Bifidobacterium longum NCC2705]
Length = 98
Score = 55.8 bits (133), Expect = 1e-07
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
+DVI KPV++EKS A + G+YTF V A+K+ IKQA+E F VKV +VNT+ K
Sbjct: 9 HDVILKPVVSEKSYAASDRGQYTFVVAPDANKVQIKQAIEEIFK-VKVTNVNTLNRAGKK 67
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIELF 93
+R G + K+AI+T+ A+ + I++F
Sbjct: 68 QRTRTGFGQRASQKRAIVTV-AEGQTIDIF 96
>gi|23502108|ref|NP_698235.1| ribosomal protein L23 [Brucella suis
1330]
gi|23348068|gb|AAN30150.1|AE014422_16 ribosomal protein L23
[Brucella suis 1330]
Length = 97
Score = 55.8 bits (133), Expect = 1e-07
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI PVITEKS + E + F V +A K IK AVEA F GVKV +VNT K K
Sbjct: 7 YDVIVSPVITEKSTMVSEHNQVVFNVARKATKPEIKAAVEALF-GVKVTAVNTAVRKGKV 65
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIEL 92
KR G S KKAI+TL A+ ++I++
Sbjct: 66 KRFRGLVGRQSDVKKAIVTL-AEGQSIDV 93
>gi|21223084|ref|NP_628863.1| 50S ribosomal protein L23
[Streptomyces coelicolor A3(2)]
gi|7321294|emb|CAB82072.1| 50S ribosomal protein L23 [Streptomyces
coelicolor A3(2)]
Length = 139
Score = 55.8 bits (133), Expect = 2e-07
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
DV+ KPV++EKS L+ KYTF V ++K IK+AV+A F VKV VNT+ + K K
Sbjct: 48 DVLLKPVVSEKSYALLDENKYTFVVAPGSNKTQIKEAVQAVFS-VKVTGVNTINRQGKRK 106
Query: 65 RVGRYTGFTSKTKKAIITLTADSKAIELF 93
R G + +K+AI+TL A+ I++F
Sbjct: 107 RTRTGFGKRADSKRAIVTL-AEGDRIDIF 134
>gi|23014086|ref|ZP_00053923.1| hypothetical protein
[Magnetospirillum magnetotacticum]
Length = 102
Score = 55.8 bits (133), Expect = 2e-07
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
+YDV++ PVITEK+ + E + TF+V A K IK AVE F GVKV +VNT+ K K
Sbjct: 11 MYDVVRAPVITEKATMGSEFRQVTFKVPLDATKPEIKAAVEGIF-GVKVTAVNTLIAKGK 69
Query: 63 AKRVGRYTGFTSKTKKAIITL 83
KR G S KKAI+TL
Sbjct: 70 VKRFRGRPGVRSDVKKAIVTL 90
>gi|32699673|sp|Q8HTL3|RK23_CHLRE Chloroplast 50S ribosomal
protein L23
gi|24496508|gb|AAN60081.1| ribosomal protein L23 [Chlamydomonas
reinhardtii]
gi|28269736|tpg|DAA00914.1| TPA: ribosomal protein L23
[Chlamydomonas reinhardtii]
Length = 95
Score = 55.5 bits (132), Expect = 2e-07
Identities = 38/83 (45%), Positives = 54/83 (64%), Gaps = 4/83 (4%)
Query: 3 LYDVIKKPVITEKSMVAL-EAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
+ D++K PVIT+K+ +AL + +YTF+VD R K IK+ E F+ V V SVNT + P
Sbjct: 1 MLDLVKYPVITQKTYIALFKDRQYTFDVDLRLTKPQIKKVFETLFN-VDVISVNT-HIPP 58
Query: 62 KAK-RVGRYTGFTSKTKKAIITL 83
+ K RVG G+ + K+AIITL
Sbjct: 59 RQKIRVGLAQGYRPRYKRAIITL 81
>gi|15965111|ref|NP_385464.1| PROBABLE 50S RIBOSOMAL PROTEIN L23
[Sinorhizobium meliloti]
gi|15074291|emb|CAC45937.1| PROBABLE 50S RIBOSOMAL PROTEIN L23
[Sinorhizobium meliloti]
Length = 97
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI P ITEKS + E + F V A K IK AVEA F GVKV +VNT+ K K
Sbjct: 7 YDVIVSPSITEKSTLVSEQNQVVFNVAKGASKPEIKAAVEALF-GVKVTAVNTLVRKGKL 65
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIEL 92
KR + G KKAI+TL AD ++I++
Sbjct: 66 KRFRGFAGKQKDVKKAIVTL-ADGQSIDV 93
>gi|27380509|ref|NP_772038.1| 50S ribosomal protein L23
[Bradyrhizobium japonicum]
gi|27353673|dbj|BAC50663.1| 50S ribosomal protein L23
[Bradyrhizobium japonicum USDA 110]
Length = 100
Score = 54.3 bits (129), Expect = 4e-07
Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI PV+TEK+ +A E K F+V +A K IK+A+E FD VKV SVNT+ K K
Sbjct: 10 YDVIVAPVVTEKATLASEHNKVLFKVAAKATKPQIKEAIEKLFD-VKVKSVNTLVRKGKT 68
Query: 64 KRVGRYTGFTSKTKKAIITL 83
K G S TK+AI+TL
Sbjct: 69 KVFRGNLGSQSNTKRAIVTL 88
>gi|15639184|ref|NP_218630.1| ribosomal protein L23 (rplW)
[Treponema pallidum]
gi|6094038|sp|O83221|RL23_TREPA 50S ribosomal protein L23
gi|7441007|pir||A71355 probable ribosomal protein L23 (rplW) -
syphilis spirochete
gi|3322455|gb|AAC65176.1| ribosomal protein L23 (rplW) [Treponema
pallidum]
Length = 94
Score = 53.9 bits (128), Expect = 5e-07
Identities = 38/81 (46%), Positives = 46/81 (55%), Gaps = 1/81 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
DV+ PV+TEKS + GKY F V RA K+ IKQAV F GV V + V K +
Sbjct: 5 DVVIAPVLTEKSNALRQQGKYVFRVAARATKIQIKQAVTQLF-GVTVRRCTVMNVFGKKR 63
Query: 65 RVGRYTGFTSKTKKAIITLTA 85
RV TG TS KKAI+ + A
Sbjct: 64 RVRHRTGRTSGWKKAIVHVAA 84
>gi|132809|sp|P11535|RK23_WHEAT Chloroplast 50S ribosomal protein
L23
gi|71302|pir||R5WT23 ribosomal protein L23 - wheat chloroplast
gi|12370|emb|CAA31328.1| unnamed protein product [Triticum
aestivum]
gi|577557|emb|CAA55027.1| large ribosomal protein 23 [Hordeum
vulgare subsp. vulgare]
Length = 93
Score = 53.9 bits (128), Expect = 6e-07
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D IK V TEKS+ L +YTF V++ K IK VE F GVKV +VN+ + K +
Sbjct: 2 DGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFF-GVKVVAVNSHRLPGKGR 60
Query: 65 RVGRYTGFTSKTKKAIITL 83
R+G G T ++ IITL
Sbjct: 61 RIGPILGHTMHYRRMIITL 79
>gi|22965159|ref|ZP_00012765.1| hypothetical protein
[Rhodopseudomonas palustris]
Length = 99
Score = 53.5 bits (127), Expect = 7e-07
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI PV+TEKS +A E K F+V A K IK+AVE FD VKV SVNT+ K K
Sbjct: 9 YDVIVAPVVTEKSTMASEHNKVVFKVQGGATKPQIKEAVEKLFD-VKVKSVNTLVRKGKT 67
Query: 64 KRVGRYTGFTSKTKKAIITL 83
K G S K+A++TL
Sbjct: 68 KAFRGTFGTQSDVKRAVVTL 87
>gi|11466746|ref|NP_039342.1| ribosomal protein L23 [Marchantia
polymorpha]
gi|132801|sp|P06390|RK23_MARPO Chloroplast 50S ribosomal protein
L23
gi|71298|pir||R5LV23 ribosomal protein L23 - liverwort
(Marchantia polymorpha) chloroplast
gi|11717|emb|CAA28128.1| rpl23 [Marchantia polymorpha]
gi|343994|dbj|BAA00283.1| unnamed protein product [Marchantia
polymorpha]
gi|224680|prf||1111187B URF 602
Length = 91
Score = 53.5 bits (127), Expect = 8e-07
Identities = 35/88 (39%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 7 IKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAKRV 66
+K PV+TEK++ LE +Y+F+V+ ++K IK+ +E F+ VKV SVN+ + K K++
Sbjct: 4 VKYPVLTEKTIRLLEKNQYSFDVNIDSNKTQIKKWIELFFN-VKVISVNSHRLPKKKKKI 62
Query: 67 GRYTGFTSKTKKAIITLTADSKAIELFA 94
G TG+T + K+ II L + +I LF+
Sbjct: 63 GTTTGYTVRYKRMIIKLQS-GYSIPLFS 89
>gi|23006442|ref|ZP_00048759.1| hypothetical protein
[Magnetospirillum magnetotacticum]
Length = 93
Score = 53.1 bits (126), Expect = 8e-07
Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI PVITEK+ E K F V +A K IK+AVE FD VKV VNT+T K K
Sbjct: 8 YDVIVSPVITEKATNLTEQNKVVFRVAPKATKPQIKEAVEKLFD-VKVLGVNTLTTKGKK 66
Query: 64 KRVGRYTGFTSKTKKAIITL 83
K G S KKAI+TL
Sbjct: 67 KFFRGQRGQRSDVKKAIVTL 86
>gi|11467236|ref|NP_043068.1| ribosomal protein L23 [Zea mays]
gi|11467277|ref|NP_043109.1| ribosomal protein L23 [Zea mays]
gi|132800|sp|P09387|RK23_MAIZE Chloroplast 50S ribosomal protein
L23
gi|71301|pir||R5ZM23 ribosomal protein L23 - maize chloroplast
gi|12418|emb|CAA30712.1| ribosomal protein L23 [Zea mays]
gi|902265|emb|CAA60330.1| ribosomal protein L23 [Zea mays]
gi|902306|emb|CAA60370.1| ribosomal protein L23 [Zea mays]
Length = 93
Score = 53.1 bits (126), Expect = 9e-07
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D IK V TEKS+ L +YTF V++ K IK VE F GVKV +VN+ + K +
Sbjct: 2 DGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFF-GVKVVAVNSHRLPGKGR 60
Query: 65 RVGRYTGFTSKTKKAIITL 83
R+G G T ++ IITL
Sbjct: 61 RMGPILGHTMHYRRMIITL 79
>gi|11466832|ref|NP_039429.1| ribosomal protein L23 [Oryza sativa
(japonica cultivar-group)]
gi|11466865|ref|NP_039462.1| ribosomal protein L23 [Oryza sativa
(japonica cultivar-group)]
gi|14017614|ref|NP_114300.1| ribosomal protein L23 [Triticum
aestivum]
gi|14017633|ref|NP_114318.1| ribosomal protein L23 [Triticum
aestivum]
gi|132804|sp|P12097|RK23_ORYSA Chloroplast 50S ribosomal protein
L23
gi|71300|pir||R5RZ23 ribosomal protein L23 - rice chloroplast
gi|12031|emb|CAA33938.1| ribosomal protein L23 [Oryza sativa
(japonica cultivar-group)]
gi|12071|emb|CAA33923.1| ribosomal protein L23 [Oryza sativa
(japonica cultivar-group)]
gi|13928247|dbj|BAB47076.1| ribosomal protein L23 [Triticum
aestivum]
gi|13928266|dbj|BAB47095.1| ribosomal protein L23 [Triticum
aestivum]
gi|226652|prf||1603356CC ribosomal protein L23
Length = 93
Score = 53.1 bits (126), Expect = 1e-06
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D IK V TEKS+ L +YTF V++ K IK VE F GVKV +VN+ + K +
Sbjct: 2 DGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFF-GVKVVAVNSHRLPGKGR 60
Query: 65 RVGRYTGFTSKTKKAIITL 83
R+G G T ++ IITL
Sbjct: 61 RMGPILGHTMHYRRMIITL 79
>gi|22966120|ref|ZP_00013717.1| hypothetical protein
[Rhodospirillum rubrum]
Length = 104
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/80 (48%), Positives = 48/80 (59%), Gaps = 1/80 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YD+++ PVITEK+ + E G+ F V A K IK AVE F VKV +VNT+ K K
Sbjct: 14 YDIVRAPVITEKATLIGEHGQVIFRVPLDATKPEIKAAVEGLFK-VKVKAVNTLRSKGKV 72
Query: 64 KRVGRYTGFTSKTKKAIITL 83
KR G S TKKAI+TL
Sbjct: 73 KRFRGTVGKRSDTKKAIVTL 92
>gi|710565|gb|AAA84593.1| ribosomal protein L23 [Oryza sativa]
gi|710569|gb|AAD15253.1| ribosomal protein L23 [Oryza sativa]
Length = 93
Score = 52.0 bits (123), Expect = 2e-06
Identities = 33/79 (41%), Positives = 44/79 (54%), Gaps = 1/79 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D IK V TEKS+ L +YTF V++ K IK VE F GV V +VN+ + K +
Sbjct: 2 DGIKYAVFTEKSLALLGKNQYTFNVESGFTKTEIKHWVELFF-GVXVVAVNSHRLPGKGR 60
Query: 65 RVGRYTGFTSKTKKAIITL 83
R+G G T ++ IITL
Sbjct: 61 RMGPILGHTMHYRRMIITL 79
>gi|22998289|ref|ZP_00042389.1| hypothetical protein
[Magnetococcus sp. MC-1]
Length = 99
Score = 51.6 bits (122), Expect = 3e-06
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 1 MNLYDVIKKPVITEKSMVALEAG-KYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTV 59
+ +Y+V+ +P++TEKS + LE G + +F V T A+K IK+A+E + VKV +V
Sbjct: 4 LRMYNVLVRPLVTEKSTMQLEKGNQISFAVATWANKPQIKKAIETIYS-VKVEAVQVSNA 62
Query: 60 KPKAKRVGRYTGFTSKTKKAIITLTADSKAIELF 93
K K KR G+ G K+A++ L + ++I+LF
Sbjct: 63 KGKTKRFGKLEGKRKDWKRAVVRLQ-EGQSIDLF 95
>gi|15889240|ref|NP_354921.1| AGR_C_3552p [Agrobacterium
tumefaciens]
gi|17935834|ref|NP_532624.1| 50S ribosomal protein L23
[Agrobacterium tumefaciens str. C58 (U. Washington)]
gi|25295416|pir||A97594 50S ribosomal protein L23 nma0127
[imported] - Agrobacterium tumefaciens (strain C58,
Cereon)
gi|25295420|pir||AF2815 50S ribosomal protein L23 [imported] -
Agrobacterium tumefaciens (strain C58, Dupont)
gi|15157067|gb|AAK87706.1| AGR_C_3552p [Agrobacterium tumefaciens
str. C58 (Cereon)]
gi|17740397|gb|AAL42940.1| 50S ribosomal protein L23
[Agrobacterium tumefaciens str. C58 (U. Washington)]
Length = 97
Score = 51.6 bits (122), Expect = 3e-06
Identities = 40/89 (44%), Positives = 53/89 (58%), Gaps = 2/89 (2%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI P ITEKS + E + F V A K IK AVEA F GVKV +VNT+ K K
Sbjct: 7 YDVIVSPSITEKSTLVSEQNQVVFNVAKTASKPEIKAAVEALF-GVKVTAVNTLIRKGKT 65
Query: 64 KRVGRYTGFTSKTKKAIITLTADSKAIEL 92
+R + G KKA++TL A+ ++I++
Sbjct: 66 RRFRGFAGKLKDVKKAVVTL-AEGQSIDV 93
>gi|32475060|ref|NP_868054.1| 50S ribosomal protein L23 [Pirellula
sp.]
gi|32445600|emb|CAD75601.1| 50S ribosomal protein L23 [Pirellula
sp.]
Length = 107
Score = 51.6 bits (122), Expect = 3e-06
Identities = 36/86 (41%), Positives = 51/86 (58%), Gaps = 2/86 (2%)
Query: 4 YDVIKKPVITEKSM-VALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
+ ++ KP++TEK + A +Y F++ A KL +K+AVE FD VKV V T T K K
Sbjct: 19 HQILLKPLVTEKGVHRATRNNQYAFQIHRDATKLDVKKAVEHLFD-VKVLKVRTQTRKGK 77
Query: 63 AKRVGRYTGFTSKTKKAIITLTADSK 88
A+R G TS KKAI++L D +
Sbjct: 78 ARRFKYKIGRTSDWKKAIVSLHEDHR 103
>gi|15676071|ref|NP_273202.1| 50S ribosomal protein L23 [Neisseria
meningitidis MC58]
gi|11276847|pir||B81231 50S ribosomal protein L23 NMB0144
[imported] - Neisseria meningitidis (strain MC58
serogroup B)
gi|7225362|gb|AAF40602.1| 50S ribosomal protein L23 [Neisseria
meningitidis MC58]
Length = 104
Score = 51.2 bits (121), Expect = 3e-06
Identities = 41/84 (48%), Positives = 50/84 (58%), Gaps = 2/84 (2%)
Query: 3 LYDVIKKPVITEKSMVALEA-GKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
L VI P+++EKS V E + TF+V A K IK AVE F GV+VA V TVT+K
Sbjct: 6 LTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKAAVELLF-GVQVADVTTVTIKG 64
Query: 62 KAKRVGRYTGFTSKTKKAIITLTA 85
K KR GR G S KKA ++L A
Sbjct: 65 KVKRFGRTLGRRSDVKKAYVSLAA 88
>gi|19920147|gb|AAM08579.1|AC092750_13 Putative ribosomal protein
L23 from chromosome 10 chloroplast insertion [Oryza
sativa (japonica cultivar-group)]
gi|31431460|gb|AAP53233.1| putative ribosomal protein L23 from
chromosome 10 chloroplast insertion [Oryza sativa
(japonica cultivar-group)]
Length = 93
Score = 51.2 bits (121), Expect = 4e-06
Identities = 33/79 (41%), Positives = 44/79 (54%), Gaps = 1/79 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D IK V EKS+ L +YTF V++ K IK VE F GVKV +VN+ + K +
Sbjct: 2 DGIKYAVFIEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFF-GVKVVAVNSHRLPGKGR 60
Query: 65 RVGRYTGFTSKTKKAIITL 83
R+G G T ++ IITL
Sbjct: 61 RMGPILGHTMHYRRMIITL 79
>gi|7525075|ref|NP_051100.1| ribosomal protein L23 [Arabidopsis
thaliana]
gi|7525098|ref|NP_051122.1| ribosomal protein L23 [Arabidopsis
thaliana]
gi|1350634|sp|P27108|RK23_ARATH Chloroplast 50S ribosomal protein
L23
gi|12213|emb|CAA46567.1| ribosomal protein L23 [Sinapis alba]
gi|5881736|dbj|BAA84427.1| ribosomal protein L23 [Arabidopsis
thaliana]
gi|5881759|dbj|BAA84450.1| ribosomal protein L23 [Arabidopsis
thaliana]
Length = 93
Score = 49.7 bits (117), Expect = 9e-06
Identities = 32/79 (40%), Positives = 46/79 (57%), Gaps = 1/79 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D IK V T+KS+ L +YTF V++ + + IK VE F GVKV ++N+ + K K
Sbjct: 2 DGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFF-GVKVIAMNSHRLPGKVK 60
Query: 65 RVGRYTGFTSKTKKAIITL 83
R+G G T ++ IITL
Sbjct: 61 RMGPILGHTMHYRRMIITL 79
>gi|22956507|ref|ZP_00004270.1| hypothetical protein [Rhodobacter
sphaeroides]
Length = 98
Score = 48.9 bits (115), Expect = 2e-05
Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 4 YDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKA 63
YDVI+KPVITEK+ + EA F V A K IK+AVEA F+ VKV +VNTV K K
Sbjct: 8 YDVIRKPVITEKATMTSEANGVVFAVAMEATKPQIKEAVEAIFN-VKVKAVNTVVTKGKT 66
Query: 64 KRVGRYTGFTSKTKKAIITL 83
K+ G S KKA +TL
Sbjct: 67 KKFKGRPGVRSDRKKAYVTL 86
>gi|15618555|ref|NP_224841.1| L23 Ribosomal Protein [Chlamydophila
pneumoniae CWL029]
gi|15836177|ref|NP_300701.1| L23 ribosomal protein [Chlamydophila
pneumoniae J138]
gi|16752395|ref|NP_444654.1| ribosomal protein L23 [Chlamydophila
pneumoniae AR39]
gi|33242002|ref|NP_876943.1| ribosomal protein L23 [Chlamydophila
pneumoniae TW-183]
gi|7674244|sp|Q9Z7Q9|RL23_CHLPN 50S ribosomal protein L23
gi|7441012|pir||G72055 ribosomal protein L23 CP0102 [imported] -
Chlamydophila pneumoniae (strains CWL029 and AR39)
gi|25295430|pir||B86571 L23 ribosomal protein [imported] -
Chlamydophila pneumoniae (strain J138)
gi|4376943|gb|AAD18784.1| L23 Ribosomal Protein [Chlamydophila
pneumoniae CWL029]
gi|7189037|gb|AAF37986.1| ribosomal protein L23 [Chlamydophila
pneumoniae AR39]
gi|8979017|dbj|BAA98852.1| L23 ribosomal protein [Chlamydophila
pneumoniae J138]
gi|33236512|gb|AAP98600.1| ribosomal protein L23 [Chlamydophila
pneumoniae TW-183]
Length = 111
Score = 48.9 bits (115), Expect = 2e-05
Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 4 YDVIKKPVITEKS--MVALEAG--------------KYTFEVDTRAHKLLIKQAVEAAF- 46
YDVIK+ +TEK+ + L AG K+ F V A K LI QA+EA +
Sbjct: 5 YDVIKRHYVTEKAKMLEHLSAGTGEGKKKGSFCKDPKFVFIVSHDATKPLIAQALEAIYV 64
Query: 47 -DGVKVASVNTVTVKPKAKRV--GRYTGFTSKTKKAIIT 82
VKV SVNT+ VKP+ R+ GR G TS KKAI+T
Sbjct: 65 DKNVKVKSVNTINVKPQPARMFRGRRKGKTSGFKKAIVT 103
>gi|11465424|ref|NP_045185.1| ribosomal protein L23 [Cyanidium
caldarium]
gi|14285739|sp|Q9TLT4|RK23_CYACA Chloroplast 50S ribosomal
protein L23
gi|6466327|gb|AAF12909.1|AF022186_31 unknown; 50S ribosomal
protein L23 [Cyanidium caldarium]
Length = 101
Score = 48.5 bits (114), Expect = 3e-05
Identities = 41/93 (44%), Positives = 54/93 (57%), Gaps = 5/93 (5%)
Query: 3 LYDVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPK 62
L D+I VIT+K++ LE YTF K+ K+A+E F VKV S+N++ + K
Sbjct: 9 LPDLILSSVITDKTIKLLETKNYTFLAPKEVSKIAFKRAIEDMFK-VKVNSINSLNLPNK 67
Query: 63 AKRVGRY-TGFTSKTKKAIITLTADSK-AIELF 93
KRVGRY TG KK I+ L DSK I+LF
Sbjct: 68 KKRVGRYKTGSLPLYKKMIVKL--DSKDTIDLF 98
>gi|26987197|ref|NP_742622.1| ribosomal protein L23 [Pseudomonas
putida KT2440]
gi|24981835|gb|AAN66086.1|AE016238_4 ribosomal protein L23
[Pseudomonas putida KT2440]
Length = 99
Score = 48.1 bits (113), Expect = 3e-05
Identities = 36/82 (43%), Positives = 52/82 (62%), Gaps = 2/82 (2%)
Query: 3 LYDVIKKPVITEKSMVALE-AGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
++ V+ P ++EK+ V E G++ F+V T A KL IK+AVE F+ VKV +V+TV V
Sbjct: 6 VFKVLLGPHVSEKATVLAEKKGQFVFKVATDATKLEIKKAVEGLFN-VKVENVSTVNVLG 64
Query: 62 KAKRVGRYTGFTSKTKKAIITL 83
K KR R G + KKAI++L
Sbjct: 65 KTKRTARGLGKRNDWKKAIVSL 86
>gi|99754|pir||S26305 ribosomal protein L23 - Arabidopsis thaliana
chloroplast
gi|11245|emb|CAA47045.1| rpl23 [Arabidopsis thaliana]
Length = 93
Score = 47.8 bits (112), Expect = 3e-05
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D IK V T+KS+ L +YTF V++ + + IK VE F GV V ++N+ + K K
Sbjct: 2 DGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFF-GVMVIAMNSHRLPGKVK 60
Query: 65 RVGRYTGFTSKTKKAIITL 83
R+G G T ++ IITL
Sbjct: 61 RMGPILGHTMHYRRMIITL 79
>gi|30248420|ref|NP_840490.1| Ribosomal L23 protein [Nitrosomonas
europaea ATCC 19718]
gi|30138306|emb|CAD84314.1| Ribosomal L23 protein [Nitrosomonas
europaea ATCC 19718]
Length = 111
Score = 47.8 bits (112), Expect = 4e-05
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 5 DVIKKPVITEKS-MVALEAGKYTFEVDTRAHKLLIKQAVEAAF--DGVKVASVNTVTVKP 61
+VIK P I+EKS +A + + F V A+K IK A+E + ++V SV V VK
Sbjct: 13 EVIKAPQISEKSTFIAEKTKQIIFYVSRDANKTEIKSAIEQIWRSQNIQVKSVQVVNVKG 72
Query: 62 KAKRVGRYTGFTSKTKKAIITLTAD 86
K KR GRY G S KKA ++L D
Sbjct: 73 KKKRFGRYLGQKSDWKKAFVSLKGD 97
>gi|23104441|ref|ZP_00090905.1| hypothetical protein [Azotobacter
vinelandii]
Length = 99
Score = 47.8 bits (112), Expect = 4e-05
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 3 LYDVIKKPVITEKSMVALEAGK-YTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKP 61
++ V+ P I+EK+ V E+ K + F+V T A KL IK+AVEA FD VKVA+V T+ V+
Sbjct: 6 VFKVLLGPHISEKATVLAESKKQFVFKVATDATKLEIKKAVEALFD-VKVANVTTLNVQG 64
Query: 62 KAKRVGRYTGFTSKTKKAIITL 83
K KR R G + KKA + L
Sbjct: 65 KTKRTVRGLGKRNDWKKAYVAL 86
>gi|11465999|ref|NP_054541.1| ribosomal protein L23 [Nicotiana
tabacum]
gi|11466034|ref|NP_054576.1| ribosomal protein L23 [Nicotiana
tabacum]
gi|28261759|ref|NP_783273.1| ribosomal protein L23 [Atropa
belladonna]
gi|28261782|ref|NP_783295.1| ribosomal protein L23 [Atropa
belladonna]
gi|132808|sp|P06391|RK23_TOBAC Chloroplast 50S ribosomal protein
L23
gi|71299|pir||R5NT23 ribosomal protein L23 - common tobacco
chloroplast
gi|11868|emb|CAA77385.1| ribosomal protein L23 [Nicotiana
tabacum]
gi|1223690|emb|CAA77408.1| ribosomal protein L23 [Nicotiana
tabacum]
gi|20068373|emb|CAC88086.1| ribosomal protein L23 [Atropa
belladonna]
gi|20068396|emb|CAC88109.1| ribosomal protein L23 [Atropa
belladonna]
gi|225239|prf||1211235BX ribosomal protein L23
gi|227679|prf||1709206A ribosomal protein CL23
Length = 93
Score = 46.2 bits (108), Expect = 1e-04
Identities = 30/79 (37%), Positives = 46/79 (57%), Gaps = 1/79 (1%)
Query: 5 DVIKKPVITEKSMVALEAGKYTFEVDTRAHKLLIKQAVEAAFDGVKVASVNTVTVKPKAK 64
D IK V T+KS+ L +YT V++ + + IK VE F GVKV ++N+ + K++
Sbjct: 2 DGIKYAVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFF-GVKVIAMNSHRLPGKSR 60
Query: 65 RVGRYTGFTSKTKKAIITL 83
R+G G T ++ IITL
Sbjct: 61 RMGPIMGHTMHYRRMIITL 79
Database: nr
Posted date: Aug 11, 2003 9:58 AM
Number of letters in database: 479,114,161
Number of sequences in database: 1,487,057
Lambda K H
0.315 0.128 0.332
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,016,300
Number of Sequences: 1487057
Number of extensions: 2030892
Number of successful extensions: 5881
Number of sequences better than 1.0e-04: 145
Number of HSP's better than 0.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 5707
Number of HSP's gapped (non-prelim): 145
length of query: 98
length of database: 479,114,161
effective HSP length: 74
effective length of query: 24
effective length of database: 369,071,943
effective search space: 8857726632
effective search space used: 8857726632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)