NCBI

NLM

PubMed Nucleotide Protein Genome Structure PopSet Taxonomy OMIM Books SNP
Search for SNP on NCBI Reference Assembly
Spacer gif
BUILD 129
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Reference SNP(refSNP) Cluster Report: rs2926013          
refSNP ID: rs2926013
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:101/129
Map to Genome Build:36.3
Allele
Variation Class:SNP:
single nucleotide polymorphism
RefSNP Alleles:A/G
Ancestral Allele:Not available
Clinical Association:unknown
HGVS Names
NM_005465.3:c.697-10120C>T
NM_181690.1:c.697-10120C>T
NT_004836.17:g.8504259G>A
Links

SNP Details are organized in the following sections:
Submission Fasta Resource GeneView Map Diversity Validation

  Submitter records for this RefSNP Cluster back to top
The submission ss13018102 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs2926013 during BLAST analysis for the current build.

NCBI
Assay ID		Handle|Submitter IDValidation
Status		ss to rs
Orientation
/Strand		Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date		Update
Date		Build
Added		Molecule
Type		Freq
Warning		Ancestral
Allele		Success
Rate
ss4126911SC_JCM|AC021126.3_96494fwd/TA/Gtatatatctctctcttccatgtatatgtgttatatatatatatatatatatatatataca10/15/0110/10/03101Genomicunknown
ss13018102SC_SNP|NT_004836.14_8395404fwd/TA/Gtatatatctctctcttccatgtatatgtgttgtatatatatatatatatatatatataca10/22/0310/31/03119Genomicunknown
ss41310159ABI|hCV26719124fwd/TA/Gtatatatctctctcttccatgtatatgtgttatatatatatatatatatatatatataca07/16/0507/17/05126Genomicunknown
ss81247647HGSV|Cor18507_SNV_20070510.chr1_240072511fwd/TA/Gtatatatctctctcttccatgtatatgtgttgtatatatatatatatatatatatataca11/26/0711/28/07130Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs2926013|allelePos=2000|totalLen=4000|taxid=9606|snpclass=1|alleles='A/G'|mol=Genomic|build=130
 Actagtgcct gtgtctgtca tcaggggacc tgtaggtgga cctgtcaggt ctggccctgc
 cattcctgcc ctctgccaac cccctgaccc tggggctggg cagtgagctc agaccatggt
 acattccatg aattggccat agcctgtggc aacaaagagc ttctgccagt aaacaagtat
 caaggtatac actaagccat gttggctgca gttagctctt acctctaagt gccatctaca
 ggcttgcagg tcaaatgcca cagcccaaaa taaaattggc caaaagcagc acagaggact
 aaagaaacaa agtcaaagac cctacccaga attctctata gtcacattct gaagggaggg
 gaagaaaagg gaaaggagaa aaaaatatat aataacatta tagggaaaga aaaagaaaga
 aaaaatccta cctgcatgaa aataattaca gaagttacaa gtgttagggt ctccagataa
 gaaaaaagca gcgtaagaat tccagcacta tgaaaaatct gaatgtagtg ataccaccaa
 aggatcacac tagctctaca gaaatggtcc ctaaccaaaa tggaaactca gaaatgacag
 ataaagaatt caaagtaggg attgcagtaa gcccaatgag atccaagaca aagttgaaaa
 tcaacaaaaa aaaacttcta aagtaatcca ggaaatgaag gaagaaataa gcatctttaa
 gagaaatcaa tcagactttc tggaattgaa aaaattcaca taaggaattt caaaatacaa
 ctgaaagctt taacaataga ccggcccaag cagaagaaag acttgcagag cctgaagacc
 agtattttaa actaatccag tcagacaaaa ataaagaaaa aataatttta aaaaatgaat
 aaagtcttca agaaatatgg aattacagaa agtgataaaa cctacaaatt actggtattc
 ctgagagaga agaagaaaaa gttaacaatg tggaaaatat atttgaggaa ataactcaag
 aaaactttgg taatcttgtt agggagacag atatccagat acaagaaatc cagagtacaa
 ctgtgagata ctatgcaaaa taaacatcac taaggatatt atcaccagac tgtccaaggt
 caacactaaa gaaaaaaaaa tcttaaaggc agctagagaa aaagggcaga tcagagggaa
 tgtcatcagg ccaaccgtca acttctcagc agaaacctta ccagccagga gagactgggg
 acctattttt agctttctca aaaaaaaaaa aaaaaaaaaa aaagaaattc caaccaagaa
 tttcataacc tgccaaacca agcttcataa gtgaataaga agtaaaatct tttccagaca
 aacaagcaca aaggaatttg ttacaactag accagcctta tgagagatcc ttaagggaat
 tctaaatatg gaaatgaaag aaaaataaat gctaccacaa aaatgcatgt aagtacatag
 cccacagacc ctataaagca aaaacacaca ctagaaagtg taaggcaacc agctaataac
 ttcatgatag gatcaaaaca tcacataaca gtattagctt tgaatgtaaa tggtctaaac
 acctcactta aaaggcacag agtggcatgt tggataaaaa aacaagactc atccatctgg
 cttgtcttca agagacccat cttatatata atgacaccta taggctcaaa gtaaaggttt
 ggagaaagag ctaccacact aatggaaaac aaaaaagagc aggaatcact attctttcat
 ctgataaaac agacttcaaa ctaacagcag ttaaaaaaaa aaaagacaaa gaagagtatt
 acataatgat aaagggctca attcaacaag aagacttaac tatcacatat atatCTTCCA
 TATATATATA TATCTCTCTC TCTCTTCCAG TATGTATATA TATTCCATAT ATATATCTCT
 CTCTTCCatg tatatgtgt
 R
 tgtatatata tatatatata tatatataca cacacacaca cacacatata tcttccatat
 atatatCTCA CATatatgta tgcacccaat attggagaac ccagagtcat aaaacaagta
 ctactagatc tacaaaaaga catagacagc aacacaataa tagtggggga cttcaacacc
 ctactagcat gagtgagatc attcaggcag aaaagtcaca cattctggac ttaaactcaa
 cacttgacca actgaacctg aaaaacatct acagaatact ctacccatca gccacagaac
 atacattctt ctcaggtgca catggaacaa tactccaaga ctgaccacat gctcgtcctt
 aaagtaagtc tcaaaaaaaa aaaaaaaaga aaaaaaaaag aaaaagaaaa agaaaaacaa
 acaaaaaaac cctgaaatca tactaaccat aatcttggac cacagtggaa taaaaacaga
 aatcaatacc aagaaggtat ctcaaaacca tacagttaca tgaaaattaa acaacttgct
 cctgaatgtc ttctgggtaa acaacaaaat caaggcagaa ataaaaatag tatttgaaat
 aaatgaaaat aggtacacaa cacaccaaaa ttccagggac gcagcaaaag cagtgttaag
 aggaaagttg aaagcactaa atgcctacct caaaacatta gaaagatctc aaattaatac
 tctaacatca catctagagg aaccaggaaa acaagaacaa actaacccat aagctagcag
 aagaaaaaaa aataactaaa atcagagcag aatggaacga aattaagacc taaaaatcca
 cataatgaaa tgatgaagcc aaaagttggt tctttgaaag gataaagaag attgctagac
 tgctagtgag attaacaaag gaaaagagag aagatataaa taaccacaat tagaaatgac
 aaagattaca ttacaactta tcccacagga atacgaaagg tcctcagagg ctatgtgtct
 atacatacaa acaagaaaat ctagaggaaa tggataaatt cctggaaaca cacaatttac
 caagactgaa tgaggaacaa attgacacac tgtacagact aatatcgagt tccaaaactg
 agtcagtaat aaaaaaaacc taccaaccaa aaaagtccca aacaagacgg attcacagtt
 gaattctatg taaggtacaa ggaagaggtg gtataaattc tactgaaact attccaaaaa
 aatgatttta caaagccagt aacatcctga taccaaaacc tggcaaagac acaatgaaga
 aagaaaatca caggactata tccctgatga acacaggtgc aaaaatcctc aacaaaatac
 tagcaaactg aattgaaaaa cacatcaaaa agttaattca ccatgatcaa gtaggcatca
 ttcctgggat gcaagggtgg ttcaacatat acaaatcaat aaatgtgatt caccacataa
 accaaattag ctttcaatga aatccaacat cactttatga taaaaaccct caacaaacta
 ggcatcaaag gaacatacct gaaaataata agcaccatct atgacaaacc cacagccaac
 atcatactga acaggcaaaa actggaagca ttccccttga gaactggaac aagatatgga
 tgccccctct caccactcct agtcaatata ttagtggaga gtgctagcca gagaaaatca
 ggtaaaagaa agaaataaaa aggcatccta ataggcaaag aaaaagtata actatctctc
 tttactgata atgattcgat actcaggaaa ccctaagggc tccaccaaaa ggctattaga
 actgataaat gatttttgca aggtttcagg agagaaaatc aatgtacaaa aatcagtagc
 atttctatat actgataaca tccaagctga gagccaaatc atttacaata gccacacaca
 caaaaaaatc caggaataCA

  GeneView back to top
GeneView via analysis of contig annotation: AKT3 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)
View variations for gene:
Include clinically associated: in gene region cSNP has frequency double hit
Group
Label		Contig->mRNAGene Model (contig mRNA transcript) Color Legend
referenceNT_004836->NM_005465
svfunction
referenceNT_004836->NM_181690
svfunction
"
Group
label		Contig-->mRNA-->ProteinContig
position		mRNA
orientation		mRNA
pos		FunctiondbSNP
allele		Protein
residue		Codon
pos		Amino acid
pos
referenceNT_004836->NM_005465->NP_0054568504259reverseintron
referenceNT_004836->NM_181690->NP_8590298504259reverseintron

GeneView: no link established by BLAST analysis of mRNA sequences
  Integrated Maps: back to top
NCBI MapViewer:  rs2926013 maps exactly once on NCBI human chromosome 1
ChromosomeContig
accession		Contig
position		Chromosome
position		Hit
orientation		Contig
Allele		Assembly
Type		Group
label		Contig
label		Neighbor
SNP		SNP_flank
position
1NW_001838553.23066361214126883minusTalt_assembly_8HuRefHuRefview1999
1NW_927572.1391988217034874plusAalt_assembly_1CeleraCeleraview1999
1NT_004836.178504259241813093plusGref_assemblyreferencereferenceview1999

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
NT_004836 AL591721
dbSNP Blast Analysis
GenBank HTGS Finished:
AL591721.7

  Population Diversity back to top
There is no frequency data.

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation		PCR results confirmed
in multiple reactions		Homozygotes detected
in individual genotype data
UNKNOWNUNKNOWNUNKNOWN

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
HAPLOTYPE:Submission | Specifications | Sample HapSet | Sample Individual
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement

Revised: May 25, 2006 1:38 PM .