R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|7489779|pir||T01574 indeterminate spikelet 1 - maize
>gi|2944040|gb|AAC05206.1| (AF048900) indeterminate spikelet 1 [Zea
mays]
Length = 433
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 433
0 150 300
Plus Strand HSPs:
Score = 307 (108.1 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 57/63 (90%), Positives = 61/63 (96%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF+LSDYEDDLKQM+N +KEEFVHILRRQSTGF+RGSSKYRGVTLHKCGRWEARMGQ L
Sbjct: 165 INFSLSDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLL 224
Query: 184 GKK 192
GKK
Sbjct: 225 GKK 227
Score = 37 (13.0 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 7/11 (63%), Positives = 9/11 (81%), Frame = +1
Query: 391 MLSCRYIYLGL 423
+L +YIYLGL
Sbjct: 223 LLGKKYIYLGL 233
>gi|2281639|gb|AAC49773.1| (AF003100) AP2 domain containing protein RAP2.7
[Arabidopsis thaliana]
Length = 403
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 403
0 150 300
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 58/63 (92%), Positives = 61/63 (96%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF L DYE+D+KQ+QNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL
Sbjct: 160 INFTLGDYEEDMKQVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 219
Query: 184 GKK 192
GKK
Sbjct: 220 GKK 222
>gi|4510402|gb|AAD21489.1| (AC006587) putative AP2 domain transcription factor
[Arabidopsis thaliana]
Length = 464
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 464
0 150 300 450
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 58/63 (92%), Positives = 61/63 (96%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF L DYE+D+KQ+QNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL
Sbjct: 206 INFTLGDYEEDMKQVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 265
Query: 184 GKK 192
GKK
Sbjct: 266 GKK 268
>gi|5360996|gb|AAD22495.3|AF134116_1 (AF134116) APETALA2 protein homolog HAP2
[Hyacinthus orientalis]
Length = 367
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 367
0 150 300
Plus Strand HSPs:
Score = 312 (109.8 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 58/63 (92%), Positives = 60/63 (95%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INFNLSDY +DLKQM NL+KEEFVHILRRQSTGFSRGSSKYRGVTLHKCG WEARMGQFL
Sbjct: 119 INFNLSDYNEDLKQMMNLAKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGHWEARMGQFL 178
Query: 184 GKK 192
GKK
Sbjct: 179 GKK 181
>gi|1351945|sp|P47927|AP2_ARATH FLORAL HOMEOTIC PROTEIN APETALA2
>gi|533709|gb|AAC13770.1| (U12546) APETALA2 protein [Arabidopsis
thaliana] >gi|2464888|emb|CAB16765.1| (Z99707) APETALA2 protein
[Arabidopsis thaliana] >gi|7270641|emb|CAB80358.1| (AL161590)
APETALA2 protein [Arabidopsis thaliana]
Length = 432
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 432
0 150 300
Plus Strand HSPs:
Score = 310 (109.1 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 56/63 (88%), Positives = 60/63 (95%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INFN+ DY+DDLKQM NL+KEEFVH+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFL
Sbjct: 184 INFNIDDYDDDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFL 243
Query: 184 GKK 192
GKK
Sbjct: 244 GKK 246
>gi|5081557|gb|AAD39440.1|AF132002_1 (AF132002) PHAP2B protein [Petunia x
hybrida]
Length = 457
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | || 457
0 150 300 450
Plus Strand HSPs:
Score = 308 (108.4 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 56/63 (88%), Positives = 61/63 (96%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INFN+SDY+DDLKQM N +KEEFVHILRRQSTGFSRGSS+YRGVTLHKCGRWE+RMGQFL
Sbjct: 189 INFNVSDYQDDLKQMTNFTKEEFVHILRRQSTGFSRGSSQYRGVTLHKCGRWESRMGQFL 248
Query: 184 GKK 192
GKK
Sbjct: 249 GKK 251
>gi|10177605|dbj|BAB10952.1| (AB020742) floral homeotic protein apetala2-like
[Arabidopsis thaliana]
Length = 352
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | 352
0 150 300
Plus Strand HSPs:
Score = 284 (100.0 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 51/63 (80%), Positives = 58/63 (92%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF++ DY DDLKQM NL+KEEF+H+LRRQSTGF RGSSKYRGVTLHKCGRWE+R+GQFL
Sbjct: 149 INFDIEDYLDDLKQMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFL 208
Query: 184 GKK 192
KK
Sbjct: 209 NKK 211
Score = 37 (13.0 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 7/15 (46%), Positives = 10/15 (66%), Frame = +1
Query: 394 LSCRYIYLGLLQVYI 438
L+ +Y+YLGL I
Sbjct: 208 LNKKYVYLGLFDTEI 222
>gi|5081555|gb|AAD39439.1|AF132001_1 (AF132001) PHAP2A protein [Petunia x
hybrida]
Length = 519
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 519
0 150 300 450
Plus Strand HSPs:
Score = 308 (108.4 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 57/63 (90%), Positives = 59/63 (93%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INFNL DYE DLKQM NL+KEEFVH+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFL
Sbjct: 214 INFNLEDYEGDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFL 273
Query: 184 GKK 192
GKK
Sbjct: 274 GKK 276
>gi|11181610|gb|AAG32658.1|AF253970_1 (AF253970) APETALA2-related transcription
factor 1 [Picea abies]
Length = 531
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 531
0 150 300 450
Plus Strand HSPs:
Score = 304 (107.0 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 62/105 (59%), Positives = 74/105 (70%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INFN+ DYEDD+KQM L+KEEFVH+LRRQSTGF RGSSK+RGVTLHKCGRWEARMGQFL
Sbjct: 249 INFNIDDYEDDVKQMSKLTKEEFVHVLRRQSTGFPRGSSKFRGVTLHKCGRWEARMGQFL 308
Query: 184 GKK*GHIFIYQLT**STVVMKYYEFKHLLGCKVKLVSA*FSMHLY 318
GKK ++ ++ + Y+ K + C K FS LY
Sbjct: 309 GKKYVYLGLFDN---EVEAARAYD-KAAIRCNGKEAVTNFSPELY 349
>gi|11181612|gb|AAG32659.1|AF253971_1 (AF253971) APETALA2-related transcription
factor 2 [Picea abies]
Length = 633
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 633
0 150 300 450 600
Plus Strand HSPs:
Score = 295 (103.8 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 55/63 (87%), Positives = 58/63 (92%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF L+DY++DL Q LSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL
Sbjct: 266 INFTLTDYQEDLDQTSKLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 325
Query: 184 GKK 192
GKK
Sbjct: 326 GKK 328
>gi|2098818|gb|AAB57700.1| (AF001012) GLOSSY15 [Zea mays]
Length = 139
Frame 1 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | 139
0 50 100
Plus Strand HSPs:
Score = 249 (87.7 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 44/70 (62%), Positives = 59/70 (84%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF L DY+D++K+M++LSKEEFV +LRRQ GF RGSS++RGVT HKCG+WEAR+GQ +
Sbjct: 35 INFTLDDYKDEMKKMKDLSKEEFVLVLRRQGAGFVRGSSRFRGVTQHKCGKWEARIGQLM 94
Query: 184 GKK*GHIFIY 213
GKK ++ +Y
Sbjct: 95 GKKYVYLGLY 104
>gi|7489716|pir||T03981 APETALA2-like protein Glossy15 - maize
>gi|1732031|gb|AAC49567.1| (U41466) AP2 DNA-binding domain protein
[Zea mays]
Length = 446
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 446
0 150 300
Plus Strand HSPs:
Score = 249 (87.7 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 44/70 (62%), Positives = 59/70 (84%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF L DY+D++K+M++LSKEEFV +LRRQ GF RGSS++RGVT HKCG+WEAR+GQ +
Sbjct: 166 INFTLDDYKDEMKKMKDLSKEEFVLVLRRQGAGFVRGSSRFRGVTQHKCGKWEARIGQLM 225
Query: 184 GKK*GHIFIY 213
GKK ++ +Y
Sbjct: 226 GKKYVYLGLY 235
>gi|8777351|dbj|BAA96941.1| (AB019231) AP2 domain transcription factor-like
[Arabidopsis thaliana]
Length = 485
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | 485
0 150 300 450
Plus Strand HSPs:
Score = 201 (70.8 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 39/61 (63%), Positives = 47/61 (77%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF + DYE+DLKQM NLSKEE V +LRRQS+GFSR +S+Y+GV L K G W A+M Q
Sbjct: 213 INFVIGDYEEDLKQMANLSKEEVVQVLRRQSSGFSRNNSRYQGVALQKIGGWGAQMEQLH 272
Query: 184 G 186
G
Sbjct: 273 G 273
>gi|6587812|gb|AAF18503.1|AC010924_16 (AC010924) Similar to gb|U44028
transcription factor CKC from Arabidopsis thaliana and contains two
PF|00847 AP2 domains
Length = 332
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | 332
0 150 300
Plus Strand HSPs:
Score = 195 (68.6 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 37/64 (57%), Positives = 50/64 (78%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKC-GRWEARMGQF 180
+NF L +YE+D+K+M++ SKEE++ LRR+S+GFSRG SKYRGV H GRWEAR+G+
Sbjct: 108 LNFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRV 167
Query: 181 LGKK 192
G K
Sbjct: 168 FGNK 171
>gi|7715603|gb|AAF68121.1|AC010793_16 (AC010793) F20B17.12 [Arabidopsis
thaliana]
Length = 308
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | | 308
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 189 (66.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 36/64 (56%), Positives = 48/64 (75%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKC-GRWEARMGQF 180
+NF L Y++D+K+M+ SKEE++ LRR+S+GFSRG SKYRGV H GRWEAR+G+
Sbjct: 110 LNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRV 169
Query: 181 LGKK 192
G K
Sbjct: 170 FGNK 173
>gi|12323780|gb|AAG51860.1|AC010926_23 (AC010926) putative AP2 domain
transcription factor; 79136-76819 [Arabidopsis thaliana]
Length = 425
Frame 1 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 425
0 150 300
Plus Strand HSPs:
Score = 189 (66.5 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 34/64 (53%), Positives = 52/64 (81%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQF 180
+NF LS+YE +++++ N++++EFV +LRR S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 296 LNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRV 355
Query: 181 LGKK 192
G K
Sbjct: 356 AGNK 359
>gi|11357162|pir||T47591 aintegumaenta-like protein - Arabidopsis thaliana
>gi|7288010|emb|CAB81797.1| (AL132971) aintegumaenta-like protein
[Arabidopsis thaliana]
Length = 205
Frame 1 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | | 205
0 50 100 150 200
Plus Strand HSPs:
Score = 178 (62.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 35/64 (54%), Positives = 46/64 (71%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKC-GRWEARMGQF 180
+NF Y +L++MQ ++KEE++ LRRQS+GFSRG SKYRGV H GRWEAR+G+
Sbjct: 125 LNFPAETYTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRV 184
Query: 181 LGKK 192
G K
Sbjct: 185 FGNK 188
>gi|9757933|dbj|BAB08476.1| (AB016891) contains similarity to unknown
protein~gb|AAD30633.1~gene_id:MSF19.5 [Arabidopsis thaliana]
Length = 555
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 555
0 150 300 450
Plus Strand HSPs:
Score = 186 (65.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 34/63 (53%), Positives = 52/63 (82%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF +S+YE +L++M++++++EFV LRR+S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 264 NFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVA 323
Query: 184 GKK 192
G K
Sbjct: 324 GNK 326
>gi|7489754|pir||T03638 hypothetical protein - maize
>gi|2652938|emb|CAA87634.1| (Z47554) orf [Zea mays]
Length = 485
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | 485
0 150 300 450
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 33/63 (52%), Positives = 51/63 (80%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF +S+YE +L++M++++++EF+ LRR+S+GFSRG+S YRGVT H + GRW+AR+G
Sbjct: 204 NFQVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGSVA 263
Query: 184 GKK 192
G K
Sbjct: 264 GNK 266
>gi|4836931|gb|AAD30633.1|AC006085_6 (AC006085) Hypothetical protein
[Arabidopsis thaliana]
Length = 516
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 516
0 150 300 450
Plus Strand HSPs:
Score = 182 (64.1 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 32/63 (50%), Positives = 52/63 (82%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF +++YE ++++M+N++++EFV +RR+S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 202 NFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVA 261
Query: 184 GKK 192
G K
Sbjct: 262 GNK 264
>gi|11358596|pir||T51580 ovule development protein aintegumenta-like protein -
Arabidopsis thaliana >gi|9755766|emb|CAC01738.1| (AL391142) ovule
development protein aintegumenta-like protein [Arabidopsis
thaliana]
Length = 581
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 581
0 150 300 450
Plus Strand HSPs:
Score = 180 (63.4 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 33/63 (52%), Positives = 52/63 (82%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF LS+YE ++++M++++++E+V LRR+S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 271 NFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVA 330
Query: 184 GKK 192
G K
Sbjct: 331 GNK 333
>gi|8978279|dbj|BAA98170.1| (AB026639) gb|AAD30633.1~gene_id:K21L13.1~similar
to unknown protein [Arabidopsis thaliana]
Length = 437
Frame 1 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | 437
0 150 300
Plus Strand HSPs:
Score = 177 (62.3 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 33/63 (52%), Positives = 49/63 (77%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF +S Y +L++M +++K+EF+ LRR+S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 234 NFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVA 293
Query: 184 GKK 192
G K
Sbjct: 294 GNK 296
>gi|9294411|dbj|BAB02492.1| (AB025629) contains similarity to unknown
protein~gb|AAD30633.1~gene_id:MOE17.15 [Arabidopsis thaliana]
Length = 540
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 540
0 150 300 450
Plus Strand HSPs:
Score = 178 (62.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 31/63 (49%), Positives = 52/63 (82%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF +++YE ++++M++++++EFV +RR+S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 211 NFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVA 270
Query: 184 GKK 192
G K
Sbjct: 271 GNK 273
>gi|1076810|pir||S54116 hypothetical protein - maize
Length = 485
Frame 1 hits (HSPs): ________
Annotated Domains: _________________
__________________________________________________
Database sequence: | | | | | 485
0 150 300 450
__________________
Annotated Domains:
DOMO DM04972: 101..256
__________________
Plus Strand HSPs:
Score = 176 (62.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 34/66 (51%), Positives = 54/66 (81%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF +S+YE +L++M++++++EF+ LRR+S+GFSRG+S YRGVT H + GRW+AR+ Q
Sbjct: 204 NFQVSNYEKELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIRQ-C 262
Query: 184 GKK*GHI 204
G+K G +
Sbjct: 263 GRKQGPV 269
>gi|11358597|pir||T49988 ovule development protein-like - Arabidopsis thaliana
>gi|7671452|emb|CAB89392.1| (AL353995) ovule development
protein-like [Arabidopsis thaliana]
Length = 566
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | 566
0 150 300 450
Plus Strand HSPs:
Score = 174 (61.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 31/63 (49%), Positives = 51/63 (80%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF +++Y ++++M++++K+EF+ LRR+S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 314 NFPITNYSKEVEEMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVA 373
Query: 184 GKK 192
G K
Sbjct: 374 GNK 376
>gi|1171429|gb|AAA86281.1| (U44028) CKC [Arabidopsis thaliana]
Length = 555
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 555
0 150 300 450
Plus Strand HSPs:
Score = 173 (60.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 31/63 (49%), Positives = 50/63 (79%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF+ +Y+ +++ M+N++++E+V LRR+S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 347 NFSAENYQKEIEDMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVA 406
Query: 184 GKK 192
G K
Sbjct: 407 GNK 409
>gi|2129537|pir||S71365 ovule development protein aintegumenta - Arabidopsis
thaliana >gi|1209099|gb|AAA91040.1| (U40256) AINTEGUMENTA
[Arabidopsis thaliana] >gi|1244708|gb|AAB17364.1| (U41339) ANT
[Arabidopsis thaliana] >gi|4490720|emb|CAB38923.1| (AL035709) ovule
development protein aintegumenta (ANT) [Arabidopsis thaliana]
>gi|7270758|emb|CAB80440.1| (AL161592) ovule development protein
aintegumenta (ANT) [Arabidopsis thaliana]
Length = 555
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 555
0 150 300 450
Plus Strand HSPs:
Score = 173 (60.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 31/63 (49%), Positives = 50/63 (79%), Frame = +1
Query: 7 NFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLH-KCGRWEARMGQFL 183
NF+ +Y+ +++ M+N++++E+V LRR+S+GFSRG+S YRGVT H + GRW+AR+G+
Sbjct: 347 NFSAENYQKEIEDMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVA 406
Query: 184 GKK 192
G K
Sbjct: 407 GNK 409
>gi|7486340|pir||T06721 hypothetical protein F28P10.30 - Arabidopsis thaliana
>gi|4678294|emb|CAB41085.1| (AL049655) APETALA2-like protein
[Arabidopsis thaliana]
Length = 247
Frame 1 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | 247
0 50 100 150 200
Plus Strand HSPs:
Score = 153 (53.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 28/53 (52%), Positives = 39/53 (73%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWE 162
INF + DY D+ +M+NL+K EFV LRR+S F RGSSKY+G+ L KC +++
Sbjct: 175 INFVVDDYRHDIDKMKNLNKVEFVQTLRRESASFGRGSSKYKGLALQKCTQFK 227
>gi|2887500|gb|AAC02777.1| (AC002339) putative AP2 domain transcription factor
[Arabidopsis thaliana]
Length = 436
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 436
0 150 300
Plus Strand HSPs:
Score = 153 (53.9 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 31/61 (50%), Positives = 44/61 (72%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFL 183
INF ++DY DL++MQNLS+EE++ LRR+S+GFSRG +KYRG+ RW+A +
Sbjct: 133 INFPVTDYTRDLEEMQNLSREEYLASLRRKSSGFSRGIAKYRGLQ----SRWDASASRMP 188
Query: 184 G 186
G
Sbjct: 189 G 189
>gi|7487047|pir||T02577 hypothetical protein T16B24.11 - Arabidopsis thaliana
>gi|3402680|gb|AAC28983.1| (AC004697) putative AP2 domain
transcription factor [Arabidopsis thaliana]
Length = 236
Frame 1 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | | 236
0 50 100 150 200
Plus Strand HSPs:
Score = 128 (45.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 24/42 (57%), Positives = 32/42 (76%), Frame = +1
Query: 4 INFNLSDYEDDLKQMQNLSKEEFVHILRRQSTGFSRGSSKYR 129
INF + DY+ D+++M+NLSKEEFV LRR S +RG SKY+
Sbjct: 161 INFIVDDYKQDIEKMKNLSKEEFVQSLRRASASLARGGSKYK 202
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.99
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.352 0.159 0.579
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.355 0.156 0.576
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.153 0.517
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.349 0.151 0.476
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.345 0.150 0.532
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.365 0.167 0.616
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 149 149 10. 74 3 12 22 0.092 34
30 0.12 36
+2 0 149 148 10. 74 3 12 22 0.091 34
30 0.11 36
+1 0 150 149 10. 74 3 12 22 0.092 34
30 0.12 36
-1 0 150 149 10. 74 3 12 22 0.092 34
30 0.12 36
-2 0 149 149 10. 74 3 12 22 0.092 34
30 0.12 36
-3 0 149 149 10. 74 3 12 22 0.092 34
30 0.12 36
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 30
No. of states in DFA: 593 (58 KB)
Total size of DFA: 197 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 147.18u 1.23s 148.41t Elapsed: 00:00:26
Total cpu time: 147.21u 1.28s 148.49t Elapsed: 00:00:26
Start: Sat Feb 2 09:26:41 2002 End: Sat Feb 2 09:27:07 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000